Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40849.t1 | XP_003614163.1 | 95.7 | 514 | 22 | 0 | 1 | 514 | 147 | 660 | 1.00E-283 | 985.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40849.t1 | P0C7R4 | 67.4 | 515 | 162 | 4 | 1 | 513 | 147 | 657 | 2.2e-197 | 689.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40849.t1 | G7JZ42 | 95.7 | 514 | 22 | 0 | 1 | 514 | 147 | 660 | 7.6e-284 | 985.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049404 | MS.gene40849 | 0.825618 | 4.25E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene40849 | 0.821089 | 4.86E-53 | -1.69E-46 |
| MS.gene053974 | MS.gene40849 | 0.801303 | 9.59E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene40849 | 0.802776 | 4.78E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene40849 | 0.815478 | 9.06E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene40849 | 0.807747 | 4.35E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene40849 | 0.859602 | 3.69E-63 | -1.69E-46 |
| MS.gene057869 | MS.gene40849 | 0.814321 | 1.63E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene40849 | 0.800053 | 1.73E-48 | -1.69E-46 |
| MS.gene060918 | MS.gene40849 | 0.801736 | 7.82E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40849 | MS.gene29333 | PPI |
| MS.gene40849 | MS.gene050870 | PPI |
| MS.gene40849 | MS.gene064542 | PPI |
| MS.gene035805 | MS.gene40849 | PPI |
| MS.gene40849 | MS.gene050867 | PPI |
| MS.gene40849 | MS.gene072467 | PPI |
| MS.gene40849 | MS.gene73119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40849.t1 | MTR_5g045620 | 95.720 | 514 | 22 | 0 | 1 | 514 | 147 | 660 | 0.0 | 1024 |
| MS.gene40849.t1 | MTR_5g044930 | 95.525 | 514 | 23 | 0 | 1 | 514 | 151 | 664 | 0.0 | 1022 |
| MS.gene40849.t1 | MTR_4g081540 | 32.692 | 364 | 233 | 6 | 157 | 512 | 426 | 785 | 5.98e-61 | 214 |
| MS.gene40849.t1 | MTR_1g066900 | 24.913 | 574 | 352 | 15 | 10 | 512 | 136 | 701 | 1.32e-40 | 156 |
| MS.gene40849.t1 | MTR_5g459290 | 84.211 | 57 | 9 | 0 | 22 | 78 | 26 | 82 | 7.34e-30 | 112 |
| MS.gene40849.t1 | MTR_4g099200 | 22.970 | 505 | 298 | 15 | 67 | 513 | 215 | 686 | 1.26e-29 | 123 |
| MS.gene40849.t1 | MTR_6g022260 | 23.118 | 372 | 270 | 8 | 54 | 422 | 147 | 505 | 4.33e-17 | 84.7 |
| MS.gene40849.t1 | MTR_1g048080 | 25.434 | 346 | 218 | 10 | 96 | 409 | 469 | 806 | 6.71e-17 | 84.7 |
| MS.gene40849.t1 | MTR_6g079920 | 21.212 | 462 | 316 | 10 | 58 | 486 | 107 | 553 | 9.84e-16 | 80.5 |
| MS.gene40849.t1 | MTR_6g079590 | 23.454 | 388 | 253 | 13 | 65 | 437 | 233 | 591 | 2.00e-15 | 79.7 |
| MS.gene40849.t1 | MTR_6g079830 | 20.996 | 462 | 317 | 10 | 58 | 486 | 107 | 553 | 1.18e-14 | 77.0 |
| MS.gene40849.t1 | MTR_1g031720 | 23.546 | 361 | 256 | 8 | 66 | 422 | 309 | 653 | 1.27e-14 | 77.4 |
| MS.gene40849.t1 | MTR_4g068360 | 24.198 | 343 | 242 | 10 | 67 | 406 | 250 | 577 | 1.31e-14 | 77.0 |
| MS.gene40849.t1 | MTR_1g068960 | 23.499 | 383 | 261 | 8 | 65 | 439 | 163 | 521 | 1.33e-14 | 77.0 |
| MS.gene40849.t1 | MTR_1g068960 | 23.120 | 359 | 229 | 7 | 51 | 409 | 254 | 565 | 1.21e-11 | 67.8 |
| MS.gene40849.t1 | MTR_6g078160 | 24.211 | 285 | 196 | 4 | 144 | 423 | 234 | 503 | 1.50e-14 | 76.6 |
| MS.gene40849.t1 | MTR_2g049740 | 23.324 | 343 | 250 | 6 | 65 | 406 | 222 | 552 | 1.56e-14 | 77.0 |
| MS.gene40849.t1 | MTR_5g095130 | 21.271 | 409 | 281 | 13 | 59 | 436 | 402 | 800 | 5.75e-14 | 75.1 |
| MS.gene40849.t1 | MTR_3g037490 | 24.706 | 340 | 222 | 9 | 96 | 418 | 219 | 541 | 5.98e-14 | 74.7 |
| MS.gene40849.t1 | MTR_1g050495 | 25.589 | 297 | 203 | 6 | 144 | 437 | 236 | 517 | 8.24e-14 | 74.3 |
| MS.gene40849.t1 | MTR_7g091410 | 21.359 | 412 | 289 | 8 | 67 | 469 | 288 | 673 | 1.07e-13 | 74.3 |
| MS.gene40849.t1 | MTR_6g078190 | 22.590 | 332 | 240 | 7 | 100 | 423 | 92 | 414 | 1.33e-13 | 73.6 |
| MS.gene40849.t1 | MTR_7g091410 | 21.359 | 412 | 289 | 8 | 67 | 469 | 149 | 534 | 1.37e-13 | 73.9 |
| MS.gene40849.t1 | MTR_7g103600 | 24.100 | 361 | 253 | 6 | 63 | 422 | 183 | 523 | 1.73e-13 | 73.6 |
| MS.gene40849.t1 | MTR_2g035630 | 22.878 | 271 | 198 | 4 | 144 | 414 | 236 | 495 | 1.79e-13 | 73.2 |
| MS.gene40849.t1 | MTR_7g091410 | 22.542 | 417 | 278 | 12 | 67 | 469 | 84 | 469 | 2.48e-13 | 72.8 |
| MS.gene40849.t1 | MTR_7g091410 | 22.542 | 417 | 278 | 12 | 67 | 469 | 43 | 428 | 2.82e-13 | 72.8 |
| MS.gene40849.t1 | MTR_3g054110 | 20.524 | 458 | 318 | 7 | 68 | 494 | 106 | 548 | 2.82e-13 | 72.8 |
| MS.gene40849.t1 | MTR_5g090170 | 21.400 | 500 | 320 | 15 | 4 | 464 | 213 | 678 | 5.38e-13 | 72.0 |
| MS.gene40849.t1 | MTR_5g090170 | 21.529 | 497 | 321 | 14 | 4 | 463 | 213 | 677 | 6.81e-13 | 71.6 |
| MS.gene40849.t1 | MTR_3g034990 | 23.723 | 274 | 192 | 6 | 144 | 414 | 246 | 505 | 6.98e-13 | 71.2 |
| MS.gene40849.t1 | MTR_5g090210 | 23.059 | 438 | 236 | 13 | 50 | 425 | 324 | 722 | 8.97e-13 | 71.2 |
| MS.gene40849.t1 | MTR_5g090210 | 21.944 | 360 | 230 | 7 | 68 | 425 | 272 | 582 | 4.38e-12 | 69.3 |
| MS.gene40849.t1 | MTR_2g026645 | 22.741 | 321 | 228 | 8 | 89 | 404 | 166 | 471 | 9.67e-13 | 71.2 |
| MS.gene40849.t1 | MTR_5g045490 | 26.749 | 243 | 168 | 4 | 220 | 461 | 320 | 553 | 1.74e-12 | 70.5 |
| MS.gene40849.t1 | MTR_1g045880 | 23.667 | 300 | 207 | 7 | 118 | 411 | 229 | 512 | 1.82e-12 | 70.1 |
| MS.gene40849.t1 | MTR_6g079210 | 23.571 | 280 | 204 | 4 | 144 | 423 | 80 | 349 | 1.92e-12 | 69.3 |
| MS.gene40849.t1 | MTR_4g108060 | 22.222 | 342 | 251 | 6 | 69 | 407 | 31 | 360 | 2.42e-12 | 69.3 |
| MS.gene40849.t1 | MTR_4g108060 | 22.287 | 341 | 250 | 6 | 69 | 406 | 165 | 493 | 2.77e-12 | 69.7 |
| MS.gene40849.t1 | MTR_6g079180 | 23.214 | 280 | 205 | 4 | 144 | 423 | 80 | 349 | 6.75e-12 | 67.4 |
| MS.gene40849.t1 | MTR_2g037740 | 23.715 | 253 | 187 | 4 | 185 | 437 | 131 | 377 | 7.76e-12 | 68.6 |
| MS.gene40849.t1 | MTR_6g072030 | 23.284 | 335 | 236 | 9 | 96 | 425 | 251 | 569 | 7.84e-12 | 68.2 |
| MS.gene40849.t1 | MTR_1g108270 | 22.154 | 325 | 242 | 4 | 86 | 409 | 172 | 486 | 8.11e-12 | 67.8 |
| MS.gene40849.t1 | MTR_3g061000 | 23.849 | 239 | 170 | 5 | 184 | 419 | 281 | 510 | 8.60e-12 | 67.8 |
| MS.gene40849.t1 | MTR_3g061000 | 22.951 | 244 | 170 | 4 | 238 | 476 | 157 | 387 | 2.51e-11 | 66.2 |
| MS.gene40849.t1 | MTR_6g065540 | 25.786 | 318 | 202 | 10 | 144 | 455 | 248 | 537 | 8.76e-12 | 67.8 |
| MS.gene40849.t1 | MTR_4g091600 | 22.750 | 400 | 262 | 13 | 10 | 384 | 312 | 689 | 8.93e-12 | 68.2 |
| MS.gene40849.t1 | MTR_4g091600 | 26.147 | 218 | 117 | 5 | 249 | 425 | 213 | 427 | 1.62e-11 | 67.4 |
| MS.gene40849.t1 | MTR_6g079250 | 22.261 | 283 | 204 | 6 | 144 | 423 | 80 | 349 | 9.78e-12 | 67.0 |
| MS.gene40849.t1 | MTR_6g079250 | 20.528 | 341 | 220 | 7 | 65 | 403 | 73 | 364 | 3.41e-11 | 65.5 |
| MS.gene40849.t1 | MTR_4g074390 | 22.059 | 340 | 250 | 6 | 70 | 406 | 166 | 493 | 1.17e-11 | 67.4 |
| MS.gene40849.t1 | MTR_6g079380 | 21.395 | 430 | 273 | 11 | 36 | 408 | 68 | 489 | 1.21e-11 | 67.4 |
| MS.gene40849.t1 | MTR_0014s0210 | 22.272 | 449 | 304 | 14 | 36 | 476 | 21 | 432 | 1.21e-11 | 67.4 |
| MS.gene40849.t1 | MTR_6g471100 | 21.326 | 347 | 247 | 10 | 67 | 405 | 276 | 604 | 1.28e-11 | 67.8 |
| MS.gene40849.t1 | MTR_7g011500 | 24.424 | 217 | 150 | 3 | 267 | 480 | 202 | 407 | 1.37e-11 | 67.4 |
| MS.gene40849.t1 | MTR_4g107210 | 22.535 | 426 | 253 | 11 | 13 | 409 | 195 | 572 | 1.55e-11 | 67.4 |
| MS.gene40849.t1 | MTR_7g076550 | 24.766 | 214 | 151 | 4 | 217 | 425 | 172 | 380 | 1.92e-11 | 66.6 |
| MS.gene40849.t1 | MTR_6g077540 | 23.891 | 293 | 212 | 5 | 131 | 423 | 250 | 531 | 3.26e-11 | 66.2 |
| MS.gene40849.t1 | MTR_7g017570 | 23.723 | 274 | 165 | 6 | 261 | 492 | 254 | 525 | 3.28e-11 | 66.6 |
| MS.gene40849.t1 | MTR_4g133740 | 23.547 | 327 | 232 | 7 | 89 | 411 | 200 | 512 | 3.53e-11 | 66.2 |
| MS.gene40849.t1 | MTR_2g103520 | 24.335 | 263 | 167 | 7 | 226 | 476 | 211 | 453 | 3.98e-11 | 66.2 |
| MS.gene40849.t1 | MTR_7g007400 | 19.878 | 327 | 252 | 4 | 99 | 425 | 209 | 525 | 4.35e-11 | 65.9 |
| MS.gene40849.t1 | MTR_6g005000 | 21.765 | 340 | 254 | 6 | 67 | 405 | 296 | 624 | 7.79e-11 | 65.1 |
| MS.gene40849.t1 | MTR_8g105170 | 25.243 | 206 | 152 | 2 | 221 | 425 | 242 | 446 | 8.47e-11 | 65.1 |
| MS.gene40849.t1 | MTR_0014s0180 | 21.932 | 383 | 269 | 11 | 100 | 476 | 91 | 449 | 9.26e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40849.t1 | AT1G69290 | 67.248 | 516 | 163 | 4 | 1 | 514 | 147 | 658 | 0.0 | 717 |
| MS.gene40849.t1 | AT1G68980 | 60.895 | 514 | 188 | 4 | 1 | 514 | 119 | 619 | 0.0 | 638 |
| MS.gene40849.t1 | AT1G03100 | 35.693 | 339 | 205 | 7 | 183 | 513 | 460 | 793 | 9.01e-66 | 227 |
| MS.gene40849.t1 | AT3G09650 | 28.771 | 358 | 235 | 4 | 174 | 512 | 406 | 762 | 8.74e-44 | 166 |
| MS.gene40849.t1 | AT4G17616 | 25.379 | 264 | 159 | 4 | 226 | 487 | 416 | 643 | 3.32e-22 | 100 |
| MS.gene40849.t1 | AT5G64320 | 23.529 | 510 | 296 | 18 | 3 | 462 | 229 | 694 | 6.31e-18 | 87.8 |
| MS.gene40849.t1 | AT1G62720 | 25.606 | 371 | 243 | 11 | 67 | 430 | 137 | 481 | 7.55e-18 | 86.7 |
| MS.gene40849.t1 | AT5G04810 | 23.614 | 415 | 264 | 8 | 96 | 472 | 475 | 874 | 1.62e-16 | 83.6 |
| MS.gene40849.t1 | AT1G64100 | 22.879 | 389 | 268 | 8 | 96 | 479 | 287 | 648 | 8.91e-16 | 80.9 |
| MS.gene40849.t1 | AT1G64100 | 23.795 | 332 | 218 | 8 | 94 | 425 | 165 | 461 | 2.03e-11 | 67.0 |
| MS.gene40849.t1 | AT1G64583 | 24.784 | 347 | 219 | 7 | 92 | 405 | 128 | 465 | 1.15e-15 | 80.1 |
| MS.gene40849.t1 | AT1G64583 | 27.155 | 232 | 152 | 6 | 196 | 416 | 82 | 307 | 7.28e-11 | 65.1 |
| MS.gene40849.t1 | AT1G64583 | 24.784 | 347 | 219 | 7 | 92 | 405 | 103 | 440 | 1.41e-15 | 79.7 |
| MS.gene40849.t1 | AT1G64583 | 26.423 | 246 | 164 | 6 | 182 | 416 | 43 | 282 | 7.50e-11 | 64.7 |
| MS.gene40849.t1 | AT1G64100 | 22.933 | 375 | 257 | 8 | 96 | 465 | 287 | 634 | 1.46e-15 | 80.1 |
| MS.gene40849.t1 | AT1G64100 | 23.795 | 332 | 218 | 8 | 94 | 425 | 165 | 461 | 2.18e-11 | 67.0 |
| MS.gene40849.t1 | AT1G64100 | 22.933 | 375 | 257 | 8 | 96 | 465 | 287 | 634 | 1.46e-15 | 80.1 |
| MS.gene40849.t1 | AT1G64100 | 23.795 | 332 | 218 | 8 | 94 | 425 | 165 | 461 | 2.18e-11 | 67.0 |
| MS.gene40849.t1 | AT3G54980 | 23.729 | 413 | 266 | 9 | 67 | 444 | 266 | 664 | 1.85e-15 | 80.1 |
| MS.gene40849.t1 | AT3G54980 | 23.729 | 413 | 266 | 9 | 67 | 444 | 266 | 664 | 1.85e-15 | 80.1 |
| MS.gene40849.t1 | AT5G39710 | 22.565 | 421 | 297 | 13 | 10 | 425 | 153 | 549 | 2.92e-15 | 79.3 |
| MS.gene40849.t1 | AT5G39710 | 23.414 | 457 | 236 | 15 | 56 | 498 | 157 | 513 | 1.89e-11 | 67.0 |
| MS.gene40849.t1 | AT4G11690 | 23.140 | 363 | 221 | 7 | 104 | 425 | 162 | 507 | 3.56e-14 | 75.5 |
| MS.gene40849.t1 | AT1G12620 | 21.376 | 407 | 269 | 8 | 67 | 437 | 175 | 566 | 4.55e-14 | 75.5 |
| MS.gene40849.t1 | AT1G12620 | 23.380 | 355 | 254 | 8 | 79 | 429 | 116 | 456 | 3.42e-13 | 72.4 |
| MS.gene40849.t1 | AT1G19520 | 22.050 | 322 | 233 | 8 | 86 | 403 | 400 | 707 | 6.47e-14 | 75.1 |
| MS.gene40849.t1 | AT1G22960 | 25.310 | 403 | 262 | 15 | 45 | 430 | 310 | 690 | 8.73e-14 | 74.7 |
| MS.gene40849.t1 | AT1G22960 | 25.310 | 403 | 262 | 15 | 45 | 430 | 310 | 690 | 8.73e-14 | 74.7 |
| MS.gene40849.t1 | AT3G53700 | 21.642 | 402 | 285 | 8 | 67 | 462 | 187 | 564 | 1.10e-13 | 74.3 |
| MS.gene40849.t1 | AT4G19440 | 22.703 | 370 | 246 | 7 | 86 | 423 | 359 | 720 | 2.42e-13 | 73.2 |
| MS.gene40849.t1 | AT4G19440 | 22.703 | 370 | 246 | 7 | 86 | 423 | 359 | 720 | 2.42e-13 | 73.2 |
| MS.gene40849.t1 | AT4G19440 | 22.703 | 370 | 246 | 7 | 86 | 423 | 359 | 720 | 2.42e-13 | 73.2 |
| MS.gene40849.t1 | AT4G19440 | 22.703 | 370 | 246 | 7 | 86 | 423 | 359 | 720 | 2.42e-13 | 73.2 |
| MS.gene40849.t1 | AT5G38730 | 26.222 | 225 | 157 | 4 | 226 | 450 | 209 | 424 | 2.45e-13 | 72.8 |
| MS.gene40849.t1 | AT5G61990 | 22.864 | 433 | 243 | 13 | 88 | 445 | 470 | 886 | 3.09e-13 | 73.2 |
| MS.gene40849.t1 | AT1G63330 | 24.315 | 292 | 199 | 6 | 144 | 431 | 223 | 496 | 3.78e-13 | 72.4 |
| MS.gene40849.t1 | AT1G63330 | 22.304 | 408 | 278 | 11 | 80 | 476 | 54 | 433 | 2.41e-11 | 66.6 |
| MS.gene40849.t1 | AT1G63330 | 22.353 | 340 | 242 | 9 | 96 | 429 | 36 | 359 | 6.09e-11 | 65.5 |
| MS.gene40849.t1 | AT1G63330 | 24.315 | 292 | 199 | 6 | 144 | 431 | 223 | 496 | 3.78e-13 | 72.4 |
| MS.gene40849.t1 | AT1G63330 | 22.304 | 408 | 278 | 11 | 80 | 476 | 54 | 433 | 2.41e-11 | 66.6 |
| MS.gene40849.t1 | AT1G63330 | 22.353 | 340 | 242 | 9 | 96 | 429 | 36 | 359 | 6.09e-11 | 65.5 |
| MS.gene40849.t1 | AT1G63330 | 24.315 | 292 | 199 | 6 | 144 | 431 | 223 | 496 | 3.78e-13 | 72.4 |
| MS.gene40849.t1 | AT1G63330 | 22.304 | 408 | 278 | 11 | 80 | 476 | 54 | 433 | 2.41e-11 | 66.6 |
| MS.gene40849.t1 | AT1G63330 | 22.353 | 340 | 242 | 9 | 96 | 429 | 36 | 359 | 6.09e-11 | 65.5 |
| MS.gene40849.t1 | AT1G05670 | 20.759 | 395 | 264 | 10 | 67 | 425 | 279 | 660 | 4.76e-13 | 72.4 |
| MS.gene40849.t1 | AT1G05670 | 20.759 | 395 | 264 | 10 | 67 | 425 | 279 | 660 | 4.76e-13 | 72.4 |
| MS.gene40849.t1 | AT1G05670 | 20.759 | 395 | 264 | 10 | 67 | 425 | 279 | 660 | 4.76e-13 | 72.4 |
| MS.gene40849.t1 | AT1G63150 | 21.311 | 366 | 255 | 9 | 96 | 456 | 109 | 446 | 5.35e-13 | 72.0 |
| MS.gene40849.t1 | AT1G63150 | 23.514 | 387 | 268 | 11 | 92 | 471 | 140 | 505 | 1.34e-11 | 67.4 |
| MS.gene40849.t1 | AT1G63150 | 21.311 | 366 | 255 | 9 | 96 | 456 | 109 | 446 | 5.35e-13 | 72.0 |
| MS.gene40849.t1 | AT1G63150 | 23.514 | 387 | 268 | 11 | 92 | 471 | 140 | 505 | 1.34e-11 | 67.4 |
| MS.gene40849.t1 | AT1G63080 | 22.924 | 301 | 213 | 6 | 128 | 425 | 125 | 409 | 6.76e-13 | 71.6 |
| MS.gene40849.t1 | AT1G63080 | 22.924 | 301 | 213 | 6 | 128 | 425 | 125 | 409 | 6.76e-13 | 71.6 |
| MS.gene40849.t1 | AT1G63080 | 22.924 | 301 | 213 | 6 | 128 | 425 | 125 | 409 | 6.76e-13 | 71.6 |
| MS.gene40849.t1 | AT1G62670 | 24.648 | 284 | 196 | 6 | 144 | 423 | 294 | 563 | 7.40e-13 | 71.6 |
| MS.gene40849.t1 | AT1G62670 | 24.648 | 284 | 196 | 6 | 144 | 423 | 294 | 563 | 7.40e-13 | 71.6 |
| MS.gene40849.t1 | AT3G07290 | 24.719 | 356 | 248 | 8 | 63 | 414 | 365 | 704 | 7.56e-13 | 71.6 |
| MS.gene40849.t1 | AT1G63400 | 22.647 | 340 | 241 | 9 | 96 | 429 | 111 | 434 | 8.13e-13 | 71.2 |
| MS.gene40849.t1 | AT1G63400 | 22.444 | 401 | 286 | 10 | 80 | 476 | 129 | 508 | 4.11e-12 | 68.9 |
| MS.gene40849.t1 | AT5G61400 | 23.318 | 223 | 164 | 2 | 206 | 425 | 185 | 403 | 8.52e-13 | 71.2 |
| MS.gene40849.t1 | AT5G61400 | 21.579 | 380 | 248 | 10 | 65 | 444 | 195 | 524 | 6.74e-11 | 65.5 |
| MS.gene40849.t1 | AT2G41720 | 19.837 | 368 | 277 | 6 | 102 | 469 | 317 | 666 | 9.34e-13 | 71.2 |
| MS.gene40849.t1 | AT2G41720 | 19.837 | 368 | 277 | 6 | 102 | 469 | 317 | 666 | 9.38e-13 | 71.2 |
| MS.gene40849.t1 | AT2G41720 | 19.837 | 368 | 277 | 6 | 102 | 469 | 185 | 534 | 1.06e-12 | 71.2 |
| MS.gene40849.t1 | AT1G62680 | 24.615 | 195 | 137 | 3 | 229 | 417 | 132 | 322 | 2.02e-12 | 70.1 |
| MS.gene40849.t1 | AT1G62680 | 24.615 | 195 | 137 | 3 | 229 | 417 | 132 | 322 | 2.02e-12 | 70.1 |
| MS.gene40849.t1 | AT4G26800 | 23.599 | 339 | 243 | 9 | 67 | 403 | 11 | 335 | 2.08e-12 | 69.3 |
| MS.gene40849.t1 | AT4G26800 | 23.599 | 339 | 243 | 9 | 67 | 403 | 156 | 480 | 2.30e-12 | 69.7 |
| MS.gene40849.t1 | AT4G26800 | 23.599 | 339 | 243 | 9 | 67 | 403 | 81 | 405 | 2.63e-12 | 69.3 |
| MS.gene40849.t1 | AT1G62590 | 25.000 | 292 | 197 | 7 | 144 | 431 | 298 | 571 | 3.01e-12 | 69.7 |
| MS.gene40849.t1 | AT1G62590 | 22.660 | 406 | 279 | 11 | 80 | 476 | 129 | 508 | 2.81e-11 | 66.6 |
| MS.gene40849.t1 | AT1G62590 | 25.000 | 292 | 197 | 7 | 144 | 431 | 298 | 571 | 3.01e-12 | 69.7 |
| MS.gene40849.t1 | AT1G62590 | 22.660 | 406 | 279 | 11 | 80 | 476 | 129 | 508 | 2.81e-11 | 66.6 |
| MS.gene40849.t1 | AT3G06920 | 21.801 | 211 | 162 | 2 | 226 | 436 | 558 | 765 | 3.02e-12 | 69.7 |
| MS.gene40849.t1 | AT1G63130 | 24.242 | 264 | 184 | 5 | 172 | 431 | 316 | 567 | 3.08e-12 | 69.7 |
| MS.gene40849.t1 | AT1G63130 | 22.141 | 411 | 264 | 10 | 67 | 476 | 149 | 504 | 8.47e-12 | 68.2 |
| MS.gene40849.t1 | AT1G63130 | 22.714 | 339 | 242 | 9 | 96 | 429 | 107 | 430 | 5.88e-11 | 65.5 |
| MS.gene40849.t1 | AT1G63130 | 24.242 | 264 | 184 | 5 | 172 | 431 | 316 | 567 | 3.08e-12 | 69.7 |
| MS.gene40849.t1 | AT1G63130 | 22.141 | 411 | 264 | 10 | 67 | 476 | 149 | 504 | 8.47e-12 | 68.2 |
| MS.gene40849.t1 | AT1G63130 | 22.714 | 339 | 242 | 9 | 96 | 429 | 107 | 430 | 5.88e-11 | 65.5 |
| MS.gene40849.t1 | AT3G06920 | 21.801 | 211 | 162 | 2 | 226 | 436 | 572 | 779 | 3.29e-12 | 69.7 |
| MS.gene40849.t1 | AT3G06920 | 21.801 | 211 | 162 | 2 | 226 | 436 | 572 | 779 | 3.29e-12 | 69.7 |
| MS.gene40849.t1 | AT5G50280 | 24.231 | 260 | 188 | 3 | 209 | 467 | 333 | 584 | 3.33e-12 | 69.7 |
| MS.gene40849.t1 | AT1G12300 | 22.423 | 388 | 275 | 9 | 93 | 476 | 146 | 511 | 3.41e-12 | 69.3 |
| MS.gene40849.t1 | AT1G12700 | 21.928 | 415 | 303 | 10 | 67 | 480 | 207 | 601 | 3.91e-12 | 69.3 |
| MS.gene40849.t1 | AT1G12700 | 21.928 | 415 | 303 | 10 | 67 | 480 | 207 | 601 | 3.91e-12 | 69.3 |
| MS.gene40849.t1 | AT1G12700 | 21.928 | 415 | 303 | 10 | 67 | 480 | 191 | 585 | 4.07e-12 | 68.9 |
| MS.gene40849.t1 | AT3G09060 | 23.599 | 339 | 192 | 9 | 144 | 419 | 293 | 627 | 4.13e-12 | 69.3 |
| MS.gene40849.t1 | AT3G09060 | 23.599 | 339 | 192 | 9 | 144 | 419 | 293 | 627 | 4.13e-12 | 69.3 |
| MS.gene40849.t1 | AT3G16710 | 22.252 | 373 | 247 | 9 | 67 | 406 | 116 | 478 | 6.17e-12 | 68.2 |
| MS.gene40849.t1 | AT1G62910 | 24.232 | 293 | 198 | 8 | 144 | 431 | 296 | 569 | 6.77e-12 | 68.6 |
| MS.gene40849.t1 | AT1G62910 | 22.222 | 342 | 240 | 9 | 96 | 429 | 109 | 432 | 1.34e-11 | 67.4 |
| MS.gene40849.t1 | AT1G62910 | 23.494 | 332 | 241 | 6 | 92 | 422 | 140 | 459 | 1.51e-11 | 67.4 |
| MS.gene40849.t1 | AT1G63230 | 24.500 | 200 | 150 | 1 | 226 | 425 | 47 | 245 | 6.83e-12 | 67.0 |
| MS.gene40849.t1 | AT1G13040 | 21.503 | 386 | 275 | 9 | 67 | 447 | 147 | 509 | 7.18e-12 | 68.2 |
| MS.gene40849.t1 | AT1G13040 | 21.503 | 386 | 275 | 9 | 67 | 447 | 147 | 509 | 7.18e-12 | 68.2 |
| MS.gene40849.t1 | AT3G16710 | 31.148 | 183 | 120 | 4 | 226 | 405 | 123 | 302 | 7.20e-12 | 67.8 |
| MS.gene40849.t1 | AT3G22470 | 27.778 | 234 | 154 | 6 | 238 | 469 | 368 | 588 | 8.22e-12 | 68.2 |
| MS.gene40849.t1 | AT5G65560 | 23.647 | 351 | 231 | 10 | 65 | 403 | 389 | 714 | 8.31e-12 | 68.6 |
| MS.gene40849.t1 | AT5G65560 | 23.636 | 220 | 124 | 5 | 257 | 476 | 325 | 500 | 4.03e-11 | 66.2 |
| MS.gene40849.t1 | AT5G65560 | 23.647 | 351 | 231 | 10 | 65 | 403 | 389 | 714 | 8.31e-12 | 68.6 |
| MS.gene40849.t1 | AT5G65560 | 23.636 | 220 | 124 | 5 | 257 | 476 | 325 | 500 | 4.03e-11 | 66.2 |
| MS.gene40849.t1 | AT5G65560 | 23.647 | 351 | 231 | 10 | 65 | 403 | 389 | 714 | 8.31e-12 | 68.6 |
| MS.gene40849.t1 | AT5G65560 | 23.636 | 220 | 124 | 5 | 257 | 476 | 325 | 500 | 4.03e-11 | 66.2 |
| MS.gene40849.t1 | AT4G16390 | 23.962 | 313 | 220 | 8 | 96 | 404 | 201 | 499 | 1.06e-11 | 67.8 |
| MS.gene40849.t1 | AT5G27270 | 23.316 | 386 | 241 | 11 | 86 | 441 | 651 | 1011 | 1.35e-11 | 67.8 |
| MS.gene40849.t1 | AT5G27270 | 23.316 | 386 | 241 | 11 | 86 | 441 | 446 | 806 | 1.70e-11 | 67.4 |
| MS.gene40849.t1 | AT5G27270 | 23.316 | 386 | 241 | 11 | 86 | 441 | 446 | 806 | 1.70e-11 | 67.4 |
| MS.gene40849.t1 | AT5G41170 | 26.786 | 168 | 122 | 1 | 239 | 406 | 26 | 192 | 2.45e-11 | 66.2 |
| MS.gene40849.t1 | AT1G12775 | 22.807 | 399 | 265 | 11 | 54 | 437 | 172 | 542 | 2.51e-11 | 66.6 |
| MS.gene40849.t1 | AT5G41170 | 26.786 | 168 | 122 | 1 | 239 | 406 | 126 | 292 | 2.85e-11 | 66.2 |
| MS.gene40849.t1 | AT5G41170 | 26.786 | 168 | 122 | 1 | 239 | 406 | 126 | 292 | 2.94e-11 | 66.2 |
| MS.gene40849.t1 | AT1G52620 | 21.888 | 466 | 281 | 12 | 66 | 496 | 167 | 584 | 2.96e-11 | 66.6 |
| MS.gene40849.t1 | AT1G79080 | 26.667 | 165 | 120 | 1 | 236 | 399 | 227 | 391 | 3.15e-11 | 66.2 |
| MS.gene40849.t1 | AT2G16880 | 23.140 | 363 | 238 | 9 | 58 | 405 | 264 | 600 | 3.17e-11 | 66.6 |
| MS.gene40849.t1 | AT4G11690 | 22.751 | 189 | 145 | 1 | 237 | 425 | 293 | 480 | 5.51e-11 | 65.5 |
| MS.gene40849.t1 | AT2G39230 | 25.789 | 190 | 141 | 0 | 234 | 423 | 463 | 652 | 6.46e-11 | 65.5 |
| MS.gene40849.t1 | AT2G15630 | 20.533 | 375 | 273 | 10 | 67 | 437 | 188 | 541 | 8.59e-11 | 65.1 |
| MS.gene40849.t1 | AT1G62930 | 24.268 | 239 | 169 | 4 | 172 | 406 | 315 | 545 | 8.92e-11 | 65.1 |
Find 91 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTATTTATATGCACTTAA+AGG | 0.150295 | 5.1:-33692049 | MS.gene40849:CDS |
| TGGGAGGCTCTGTGGGTCTT+GGG | 0.176003 | 5.1:-33691637 | MS.gene40849:CDS |
| TTGGGAGGCTCTGTGGGTCT+TGG | 0.177689 | 5.1:-33691638 | MS.gene40849:CDS |
| TCTTCATAAGGGAAATATTA+AGG | 0.192767 | 5.1:-33691807 | MS.gene40849:CDS |
| GATTATTGAAGCTCAGAAAT+TGG | 0.273337 | 5.1:-33691771 | MS.gene40849:CDS |
| AAGCCTGATGTGTTTAGTTT+TGG | 0.305298 | 5.1:-33692079 | MS.gene40849:CDS |
| GAGATGATGTAGAGGAAGTT+TGG | 0.312610 | 5.1:-33691871 | MS.gene40849:CDS |
| CCGAAACATATCCGTTAATC+AGG | 0.334305 | 5.1:+33691180 | None:intergenic |
| AAGAAAGCTGCCATCAATTC+AGG | 0.341348 | 5.1:+33691362 | None:intergenic |
| CTTCATAAGGGAAATATTAA+GGG | 0.341682 | 5.1:-33691806 | MS.gene40849:CDS |
| TGAAAATATTTGTTGATAAG+TGG | 0.364460 | 5.1:-33690983 | MS.gene40849:CDS |
| GGAATGCATCAACCAGATTC+TGG | 0.365582 | 5.1:+33691072 | None:intergenic |
| GGTCATTCGGCTCGAATTGT+AGG | 0.371011 | 5.1:+33691216 | None:intergenic |
| CTTATTTATATGCACTTAAA+GGG | 0.372712 | 5.1:-33692048 | MS.gene40849:CDS |
| GATCAAATTTGACCAGAATC+TGG | 0.372731 | 5.1:-33691084 | MS.gene40849:CDS |
| AGCTCAAAGTGGCCAGGTTA+AGG | 0.380872 | 5.1:-33690926 | MS.gene40849:CDS |
| GACTATAATGACAGGTTTGA+TGG | 0.384239 | 5.1:-33691396 | MS.gene40849:CDS |
| TGGTCAAATTTGATCCCCTT+TGG | 0.391575 | 5.1:+33691092 | None:intergenic |
| GACAAGTATGTCTGGTCATT+CGG | 0.398593 | 5.1:+33691203 | None:intergenic |
| ACAGAACTGCAGGGTTGCTT+TGG | 0.400054 | 5.1:-33692230 | MS.gene40849:CDS |
| CCTGATTAACGGATATGTTT+CGG | 0.401301 | 5.1:-33691180 | MS.gene40849:CDS |
| ATAAGTGGATATGTTAAGTC+TGG | 0.406941 | 5.1:-33691941 | MS.gene40849:CDS |
| TGTTTCTATCAGAGCATCAT+AGG | 0.407915 | 5.1:+33691508 | None:intergenic |
| ACGCCACCCCACGAATGAAA+TGG | 0.409572 | 5.1:+33692310 | None:intergenic |
| TTGAAGTTGGTACTCATGAT+TGG | 0.409872 | 5.1:-33691313 | MS.gene40849:CDS |
| GAGATACAAGCAAGCGTTCA+TGG | 0.416295 | 5.1:-33690961 | MS.gene40849:CDS |
| GGTTGCTTTGGACGAGAAGC+TGG | 0.416737 | 5.1:-33692218 | MS.gene40849:CDS |
| GGGAGGCTCTGTGGGTCTTG+GGG | 0.421493 | 5.1:-33691636 | MS.gene40849:CDS |
| CTTGATGAGATGAATGCTTT+GGG | 0.425114 | 5.1:-33691656 | MS.gene40849:CDS |
| GTGACGGAGATTAGTAGTTC+AGG | 0.428125 | 5.1:-33691551 | MS.gene40849:CDS |
| ACATACTTGTCCCTGATTAA+CGG | 0.428702 | 5.1:-33691191 | MS.gene40849:CDS |
| TCTTGATGAGATGAATGCTT+TGG | 0.429748 | 5.1:-33691657 | MS.gene40849:CDS |
| CGCCACCCCACGAATGAAAT+GGG | 0.434574 | 5.1:+33692311 | None:intergenic |
| CTCTGTTTAGGGACATGAGA+GGG | 0.436667 | 5.1:-33691451 | MS.gene40849:CDS |
| AACTGCGGAGGCTACTCTAT+TGG | 0.438932 | 5.1:-33691573 | MS.gene40849:CDS |
| GGTCTATGTGCCGATCTTGA+AGG | 0.443651 | 5.1:-33691615 | MS.gene40849:CDS |
| GTTGACGAGTCTATAGGTTT+CGG | 0.444814 | 5.1:-33691731 | MS.gene40849:CDS |
| GAATCATCGGCCTGAATTGA+TGG | 0.445599 | 5.1:-33691372 | MS.gene40849:CDS |
| AGTTAAGGAATATCTTCATA+AGG | 0.447351 | 5.1:-33691819 | MS.gene40849:CDS |
| ATCAAAGTTGACGAGTCTAT+AGG | 0.458638 | 5.1:-33691737 | MS.gene40849:CDS |
| ACTGATGCTGACAGAGTTGT+TGG | 0.462007 | 5.1:-33692124 | MS.gene40849:CDS |
| AATGCTTTGGGAGGCTCTGT+GGG | 0.462220 | 5.1:-33691644 | MS.gene40849:CDS |
| GTGAATGCATGTGTTAGTAT+TGG | 0.469659 | 5.1:-33691704 | MS.gene40849:CDS |
| CGAGGGTTCTTGATTTGAAA+GGG | 0.470046 | 5.1:-33691427 | MS.gene40849:CDS |
| TTTCTTAGATGAGGTGGTTG+AGG | 0.470772 | 5.1:-33691345 | MS.gene40849:CDS |
| ATCAGGCTTAACACCGAGCT+TGG | 0.475678 | 5.1:+33692093 | None:intergenic |
| CTGAAAGTCTTGACCGGACA+TGG | 0.478163 | 5.1:+33691484 | None:intergenic |
| GTTAAGGAATATCTTCATAA+GGG | 0.479601 | 5.1:-33691818 | MS.gene40849:CDS |
| AATCCAAAACTAAACACATC+AGG | 0.490880 | 5.1:+33692076 | None:intergenic |
| GTCCCATTTCATTCGTGGGG+TGG | 0.502625 | 5.1:-33692313 | MS.gene40849:CDS |
| TAGTAGTTCAGGTCTAAAGT+TGG | 0.504114 | 5.1:-33691540 | MS.gene40849:CDS |
| TTCAGGTCTAAAGTTGGAAG+TGG | 0.509330 | 5.1:-33691534 | MS.gene40849:CDS |
| TAATCAGGGACAAGTATGTC+TGG | 0.515514 | 5.1:+33691195 | None:intergenic |
| GGCAGCTTTCTTAGATGAGG+TGG | 0.521040 | 5.1:-33691351 | MS.gene40849:CDS |
| GAATGCTTTGGGAGGCTCTG+TGG | 0.523683 | 5.1:-33691645 | MS.gene40849:CDS |
| TTGCAGTAAGCCTTCAAGAT+CGG | 0.528610 | 5.1:+33691605 | None:intergenic |
| TAGGGACATGAGAGGGGCGA+GGG | 0.531432 | 5.1:-33691444 | MS.gene40849:CDS |
| CTCCCTTGACCATAGCATAC+AGG | 0.534135 | 5.1:+33691051 | None:intergenic |
| CTGATAGAAACATCCATGTC+CGG | 0.534600 | 5.1:-33691497 | MS.gene40849:CDS |
| TTAGGGACATGAGAGGGGCG+AGG | 0.535492 | 5.1:-33691445 | MS.gene40849:CDS |
| GAGGATCCTCGTATTGAAGT+TGG | 0.536511 | 5.1:-33691326 | MS.gene40849:CDS |
| GCGAGGGTTCTTGATTTGAA+AGG | 0.543509 | 5.1:-33691428 | MS.gene40849:CDS |
| GCATTACAAGAAGCAACATC+AGG | 0.545046 | 5.1:+33692184 | None:intergenic |
| CAGGTTTGATGGAGAATCAT+CGG | 0.557010 | 5.1:-33691385 | MS.gene40849:CDS |
| ATTCCTGTATGCTATGGTCA+AGG | 0.570553 | 5.1:-33691054 | MS.gene40849:CDS |
| AGATTCAAGATGAAAACAGC+AGG | 0.574249 | 5.1:+33692150 | None:intergenic |
| AGTTACTTGACTATAATGAC+AGG | 0.574269 | 5.1:-33691404 | MS.gene40849:CDS |
| TGATGCATTCCTGTATGCTA+TGG | 0.578318 | 5.1:-33691060 | MS.gene40849:CDS |
| GAATGATAGAGATGATGTAG+AGG | 0.581566 | 5.1:-33691879 | MS.gene40849:CDS |
| GACCGACTGAAAGTCTTGAC+CGG | 0.581684 | 5.1:+33691478 | None:intergenic |
| GTTGGAATTATGTCCAAGCT+CGG | 0.583093 | 5.1:-33692106 | MS.gene40849:CDS |
| GAGGTTAAGAGAAAGTTAGC+GGG | 0.585709 | 5.1:-33691122 | MS.gene40849:CDS |
| TTCCTGTATGCTATGGTCAA+GGG | 0.590606 | 5.1:-33691053 | MS.gene40849:CDS |
| GATGGCAGCTTTCTTAGATG+AGG | 0.607823 | 5.1:-33691354 | MS.gene40849:CDS |
| TCTCTGTTTAGGGACATGAG+AGG | 0.609112 | 5.1:-33691452 | MS.gene40849:CDS |
| ATGCAAGAAGAACTTTCAGA+AGG | 0.609422 | 5.1:-33691247 | MS.gene40849:CDS |
| TGATGCTGTGATGCAAGTTG+TGG | 0.610490 | 5.1:-33691021 | MS.gene40849:CDS |
| GATGAGATGAATGCTTTGGG+AGG | 0.611114 | 5.1:-33691653 | MS.gene40849:CDS |
| CGAGGTTAAGAGAAAGTTAG+CGG | 0.617178 | 5.1:-33691123 | MS.gene40849:CDS |
| CGAAACATATCCGTTAATCA+GGG | 0.620823 | 5.1:+33691181 | None:intergenic |
| TTTGTCCCATTTCATTCGTG+GGG | 0.621642 | 5.1:-33692316 | MS.gene40849:CDS |
| TGTAATGATGTTGTGGAACG+AGG | 0.624533 | 5.1:-33691141 | MS.gene40849:CDS |
| TCTGTTTAGGGACATGAGAG+GGG | 0.625777 | 5.1:-33691450 | MS.gene40849:CDS |
| GGAGGCTACTCTATTGGTGA+CGG | 0.634065 | 5.1:-33691567 | MS.gene40849:CDS |
| CTGTATGCTATGGTCAAGGG+AGG | 0.634721 | 5.1:-33691050 | MS.gene40849:CDS |
| GTCCGGTCAAGACTTTCAGT+CGG | 0.642135 | 5.1:-33691480 | MS.gene40849:CDS |
| CAAAGAGAATCGAACTGCGG+AGG | 0.652528 | 5.1:-33691585 | MS.gene40849:CDS |
| AGGTTAAGAGAAAGTTAGCG+GGG | 0.663255 | 5.1:-33691121 | MS.gene40849:CDS |
| GGTTAAGAGAAAGTTAGCGG+GGG | 0.720845 | 5.1:-33691120 | MS.gene40849:CDS |
| CTGCAAAGAGAATCGAACTG+CGG | 0.726664 | 5.1:-33691588 | MS.gene40849:CDS |
| TGAGTACCAACTTCAATACG+AGG | 0.734272 | 5.1:+33691320 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTCTAATTTGATAAG+TGG | - | chr5.1:33691286-33691305 | MS.gene40849:CDS | 15.0% |
| !! | AAAAAAACGATATTTGAACA+TGG | + | chr5.1:33690909-33690928 | None:intergenic | 20.0% |
| !! | CTTATTTATATGCACTTAAA+GGG | - | chr5.1:33691194-33691213 | MS.gene40849:CDS | 20.0% |
| !!! | TGAAAATATTTGTTGATAAG+TGG | - | chr5.1:33692259-33692278 | MS.gene40849:CDS | 20.0% |
| ! | AGTTAAGGAATATCTTCATA+AGG | - | chr5.1:33691423-33691442 | MS.gene40849:CDS | 25.0% |
| ! | ATTTAACAAGTGAAAAAGCA+GGG | + | chr5.1:33690886-33690905 | None:intergenic | 25.0% |
| ! | CTTCATAAGGGAAATATTAA+GGG | - | chr5.1:33691436-33691455 | MS.gene40849:CDS | 25.0% |
| ! | GAAAAAGAATGTCAGAAAAA+TGG | - | chr5.1:33692338-33692357 | MS.gene40849:CDS | 25.0% |
| ! | GCTTATTTATATGCACTTAA+AGG | - | chr5.1:33691193-33691212 | MS.gene40849:CDS | 25.0% |
| ! | GTTAAGGAATATCTTCATAA+GGG | - | chr5.1:33691424-33691443 | MS.gene40849:CDS | 25.0% |
| ! | TCTTCATAAGGGAAATATTA+AGG | - | chr5.1:33691435-33691454 | MS.gene40849:CDS | 25.0% |
| !!! | ATTTTGATGTAATGATGTTG+TGG | - | chr5.1:33692094-33692113 | MS.gene40849:CDS | 25.0% |
| !!! | CACTTTTTGTTTAGTAGTTA+AGG | - | chr5.1:33691408-33691427 | MS.gene40849:CDS | 25.0% |
| !!! | GCTTATTGCTTTTAAGAATT+GGG | - | chr5.1:33692365-33692384 | MS.gene40849:CDS | 25.0% |
| AATCCAAAACTAAACACATC+AGG | + | chr5.1:33691169-33691188 | None:intergenic | 30.0% | |
| AGTTACTTGACTATAATGAC+AGG | - | chr5.1:33691838-33691857 | MS.gene40849:CDS | 30.0% | |
| ATAAGTGGATATGTTAAGTC+TGG | - | chr5.1:33691301-33691320 | MS.gene40849:CDS | 30.0% | |
| CTGTTCAAAAAGAGGTAAAA+AGG | + | chr5.1:33690996-33691015 | None:intergenic | 30.0% | |
| GATTATTGAAGCTCAGAAAT+TGG | - | chr5.1:33691471-33691490 | MS.gene40849:CDS | 30.0% | |
| GATTTAACAAGTGAAAAAGC+AGG | + | chr5.1:33690887-33690906 | None:intergenic | 30.0% | |
| TTTAACAAGTGAAAAAGCAG+GGG | + | chr5.1:33690885-33690904 | None:intergenic | 30.0% | |
| !! | AAAGTTTTGATGCTTGGTTT+TGG | - | chr5.1:33691241-33691260 | MS.gene40849:CDS | 30.0% |
| !! | CGCTTATTGCTTTTAAGAAT+TGG | - | chr5.1:33692364-33692383 | MS.gene40849:CDS | 30.0% |
| !! | GAGTTAAAAGTTTTGATGCT+TGG | - | chr5.1:33691235-33691254 | MS.gene40849:CDS | 30.0% |
| ACATACTTGTCCCTGATTAA+CGG | - | chr5.1:33692051-33692070 | MS.gene40849:CDS | 35.0% | |
| AGATTCAAGATGAAAACAGC+AGG | + | chr5.1:33691095-33691114 | None:intergenic | 35.0% | |
| ATCAAAGTTGACGAGTCTAT+AGG | - | chr5.1:33691505-33691524 | MS.gene40849:CDS | 35.0% | |
| ATGCAAGAAGAACTTTCAGA+AGG | - | chr5.1:33691995-33692014 | MS.gene40849:CDS | 35.0% | |
| CGAAACATATCCGTTAATCA+GGG | + | chr5.1:33692064-33692083 | None:intergenic | 35.0% | |
| CTTGATGAGATGAATGCTTT+GGG | - | chr5.1:33691586-33691605 | MS.gene40849:CDS | 35.0% | |
| GAATGATAGAGATGATGTAG+AGG | - | chr5.1:33691363-33691382 | MS.gene40849:CDS | 35.0% | |
| GACACATAAAAAGCTCAAAG+TGG | - | chr5.1:33692305-33692324 | MS.gene40849:CDS | 35.0% | |
| GACTATAATGACAGGTTTGA+TGG | - | chr5.1:33691846-33691865 | MS.gene40849:CDS | 35.0% | |
| GATCAAATTTGACCAGAATC+TGG | - | chr5.1:33692158-33692177 | MS.gene40849:CDS | 35.0% | |
| GTGAATGCATGTGTTAGTAT+TGG | - | chr5.1:33691538-33691557 | MS.gene40849:CDS | 35.0% | |
| TCTTGATGAGATGAATGCTT+TGG | - | chr5.1:33691585-33691604 | MS.gene40849:CDS | 35.0% | |
| TTAACAAGTGAAAAAGCAGG+GGG | + | chr5.1:33690884-33690903 | None:intergenic | 35.0% | |
| ! | CCTGATTAACGGATATGTTT+CGG | - | chr5.1:33692062-33692081 | MS.gene40849:CDS | 35.0% |
| ! | GACATTCTTTTTCCTTAACC+TGG | + | chr5.1:33692331-33692350 | None:intergenic | 35.0% |
| ! | TAGTAGTTCAGGTCTAAAGT+TGG | - | chr5.1:33691702-33691721 | MS.gene40849:CDS | 35.0% |
| ! | TCTTTTTGAACAGAACTGCA+GGG | - | chr5.1:33691003-33691022 | MS.gene40849:CDS | 35.0% |
| ! | TGTTTCTATCAGAGCATCAT+AGG | + | chr5.1:33691737-33691756 | None:intergenic | 35.0% |
| ! | TTTTGTCCCATTTCATTCGT+GGG | - | chr5.1:33690925-33690944 | MS.gene40849:CDS | 35.0% |
| ! | TTTTTGTCCCATTTCATTCG+TGG | - | chr5.1:33690924-33690943 | MS.gene40849:CDS | 35.0% |
| !! | AAGCCTGATGTGTTTAGTTT+TGG | - | chr5.1:33691163-33691182 | MS.gene40849:CDS | 35.0% |
| !! | ATTGCTTTTAAGAATTGGGC+TGG | - | chr5.1:33692369-33692388 | MS.gene40849:CDS | 35.0% |
| !! | TTGAAGTTGGTACTCATGAT+TGG | - | chr5.1:33691929-33691948 | MS.gene40849:CDS | 35.0% |
| AAAGAGGTAAAAAGGCAGCA+AGG | + | chr5.1:33690988-33691007 | None:intergenic | 40.0% | |
| AAGAAAGCTGCCATCAATTC+AGG | + | chr5.1:33691883-33691902 | None:intergenic | 40.0% | |
| AGGTTAAGAGAAAGTTAGCG+GGG | - | chr5.1:33692121-33692140 | MS.gene40849:CDS | 40.0% | |
| ATAAAAAGCTCAAAGTGGCC+AGG | - | chr5.1:33692310-33692329 | MS.gene40849:CDS | 40.0% | |
| ATTCCTGTATGCTATGGTCA+AGG | - | chr5.1:33692188-33692207 | MS.gene40849:CDS | 40.0% | |
| CAGGTTTGATGGAGAATCAT+CGG | - | chr5.1:33691857-33691876 | MS.gene40849:CDS | 40.0% | |
| CCGAAACATATCCGTTAATC+AGG | + | chr5.1:33692065-33692084 | None:intergenic | 40.0% | |
| CGAGGTTAAGAGAAAGTTAG+CGG | - | chr5.1:33692119-33692138 | MS.gene40849:CDS | 40.0% | |
| CTGATAGAAACATCCATGTC+CGG | - | chr5.1:33691745-33691764 | MS.gene40849:CDS | 40.0% | |
| CTGCAGTTCTGTTCAAAAAG+AGG | + | chr5.1:33691004-33691023 | None:intergenic | 40.0% | |
| GACAAGTATGTCTGGTCATT+CGG | + | chr5.1:33692042-33692061 | None:intergenic | 40.0% | |
| GAGATGATGTAGAGGAAGTT+TGG | - | chr5.1:33691371-33691390 | MS.gene40849:CDS | 40.0% | |
| GAGGTTAAGAGAAAGTTAGC+GGG | - | chr5.1:33692120-33692139 | MS.gene40849:CDS | 40.0% | |
| GCATTACAAGAAGCAACATC+AGG | + | chr5.1:33691061-33691080 | None:intergenic | 40.0% | |
| GTTGACGAGTCTATAGGTTT+CGG | - | chr5.1:33691511-33691530 | MS.gene40849:CDS | 40.0% | |
| GTTGGAATTATGTCCAAGCT+CGG | - | chr5.1:33691136-33691155 | MS.gene40849:CDS | 40.0% | |
| TAATCAGGGACAAGTATGTC+TGG | + | chr5.1:33692050-33692069 | None:intergenic | 40.0% | |
| TGAGTACCAACTTCAATACG+AGG | + | chr5.1:33691925-33691944 | None:intergenic | 40.0% | |
| TGATGCATTCCTGTATGCTA+TGG | - | chr5.1:33692182-33692201 | MS.gene40849:CDS | 40.0% | |
| TGGTCAAATTTGATCCCCTT+TGG | + | chr5.1:33692153-33692172 | None:intergenic | 40.0% | |
| TGTAATGATGTTGTGGAACG+AGG | - | chr5.1:33692101-33692120 | MS.gene40849:CDS | 40.0% | |
| TTCCTGTATGCTATGGTCAA+GGG | - | chr5.1:33692189-33692208 | MS.gene40849:CDS | 40.0% | |
| TTGCAGTAAGCCTTCAAGAT+CGG | + | chr5.1:33691640-33691659 | None:intergenic | 40.0% | |
| TTTCTTAGATGAGGTGGTTG+AGG | - | chr5.1:33691897-33691916 | MS.gene40849:CDS | 40.0% | |
| TTTGTCCCATTTCATTCGTG+GGG | - | chr5.1:33690926-33690945 | MS.gene40849:CDS | 40.0% | |
| ! | AGTCGGTCTTTTCTCTGTTT+AGG | - | chr5.1:33691779-33691798 | MS.gene40849:CDS | 40.0% |
| ! | CGAGGGTTCTTGATTTGAAA+GGG | - | chr5.1:33691815-33691834 | MS.gene40849:CDS | 40.0% |
| ! | CTCTTTTTGAACAGAACTGC+AGG | - | chr5.1:33691002-33691021 | MS.gene40849:CDS | 40.0% |
| ! | GTCGGTCTTTTCTCTGTTTA+GGG | - | chr5.1:33691780-33691799 | MS.gene40849:CDS | 40.0% |
| ! | TTCAGGTCTAAAGTTGGAAG+TGG | - | chr5.1:33691708-33691727 | MS.gene40849:CDS | 40.0% |
| !! | ATCCACGCTTTTTGTAAAGC+TGG | - | chr5.1:33691961-33691980 | MS.gene40849:CDS | 40.0% |
| !! | TCCACGCTTTTTGTAAAGCT+GGG | - | chr5.1:33691962-33691981 | MS.gene40849:CDS | 40.0% |
| ACTGATGCTGACAGAGTTGT+TGG | - | chr5.1:33691118-33691137 | MS.gene40849:CDS | 45.0% | |
| CTCTGTTTAGGGACATGAGA+GGG | - | chr5.1:33691791-33691810 | MS.gene40849:CDS | 45.0% | |
| CTGCAAAGAGAATCGAACTG+CGG | - | chr5.1:33691654-33691673 | MS.gene40849:CDS | 45.0% | |
| GAATCATCGGCCTGAATTGA+TGG | - | chr5.1:33691870-33691889 | MS.gene40849:CDS | 45.0% | |
| GAGATACAAGCAAGCGTTCA+TGG | - | chr5.1:33692281-33692300 | MS.gene40849:CDS | 45.0% | |
| GAGGATCCTCGTATTGAAGT+TGG | - | chr5.1:33691916-33691935 | MS.gene40849:CDS | 45.0% | |
| GATGGCAGCTTTCTTAGATG+AGG | - | chr5.1:33691888-33691907 | MS.gene40849:CDS | 45.0% | |
| GGAATGCATCAACCAGATTC+TGG | + | chr5.1:33692173-33692192 | None:intergenic | 45.0% | |
| GGTTAAGAGAAAGTTAGCGG+GGG | - | chr5.1:33692122-33692141 | MS.gene40849:CDS | 45.0% | |
| TCCCAGCTTTACAAAAAGCG+TGG | + | chr5.1:33691966-33691985 | None:intergenic | 45.0% | |
| TCTCTGTTTAGGGACATGAG+AGG | - | chr5.1:33691790-33691809 | MS.gene40849:CDS | 45.0% | |
| TCTGTTTAGGGACATGAGAG+GGG | - | chr5.1:33691792-33691811 | MS.gene40849:CDS | 45.0% | |
| TGATGCTGTGATGCAAGTTG+TGG | - | chr5.1:33692221-33692240 | MS.gene40849:CDS | 45.0% | |
| ! | GATGAGATGAATGCTTTGGG+AGG | - | chr5.1:33691589-33691608 | MS.gene40849:CDS | 45.0% |
| ! | GCGAGGGTTCTTGATTTGAA+AGG | - | chr5.1:33691814-33691833 | MS.gene40849:CDS | 45.0% |
| ! | GTGACGGAGATTAGTAGTTC+AGG | - | chr5.1:33691691-33691710 | MS.gene40849:CDS | 45.0% |
| !! | ACGCTTTTTGTAAAGCTGGG+AGG | - | chr5.1:33691965-33691984 | MS.gene40849:CDS | 45.0% |
| AACTGCGGAGGCTACTCTAT+TGG | - | chr5.1:33691669-33691688 | MS.gene40849:CDS | 50.0% | |
| AAGAGAAAGTTAGCGGGGGA+TGG | - | chr5.1:33692126-33692145 | MS.gene40849:CDS | 50.0% | |
| ACAGAACTGCAGGGTTGCTT+TGG | - | chr5.1:33691012-33691031 | MS.gene40849:CDS | 50.0% | |
| AGAGAAAGTTAGCGGGGGAT+GGG | - | chr5.1:33692127-33692146 | MS.gene40849:CDS | 50.0% | |
| AGCTCAAAGTGGCCAGGTTA+AGG | - | chr5.1:33692316-33692335 | MS.gene40849:CDS | 50.0% | |
| ATCAGGCTTAACACCGAGCT+TGG | + | chr5.1:33691152-33691171 | None:intergenic | 50.0% | |
| CAAAGAGAATCGAACTGCGG+AGG | - | chr5.1:33691657-33691676 | MS.gene40849:CDS | 50.0% | |
| CTCCCTTGACCATAGCATAC+AGG | + | chr5.1:33692194-33692213 | None:intergenic | 50.0% | |
| CTGAAAGTCTTGACCGGACA+TGG | + | chr5.1:33691761-33691780 | None:intergenic | 50.0% | |
| CTGTATGCTATGGTCAAGGG+AGG | - | chr5.1:33692192-33692211 | MS.gene40849:CDS | 50.0% | |
| GACCGACTGAAAGTCTTGAC+CGG | + | chr5.1:33691767-33691786 | None:intergenic | 50.0% | |
| GGAGGCTACTCTATTGGTGA+CGG | - | chr5.1:33691675-33691694 | MS.gene40849:CDS | 50.0% | |
| GGCAGCTTTCTTAGATGAGG+TGG | - | chr5.1:33691891-33691910 | MS.gene40849:CDS | 50.0% | |
| GTCCGGTCAAGACTTTCAGT+CGG | - | chr5.1:33691762-33691781 | MS.gene40849:CDS | 50.0% | |
| ! | GGTCATTCGGCTCGAATTGT+AGG | + | chr5.1:33692029-33692048 | None:intergenic | 50.0% |
| ! | GGTCTATGTGCCGATCTTGA+AGG | - | chr5.1:33691627-33691646 | MS.gene40849:CDS | 50.0% |
| !! | AATGCTTTGGGAGGCTCTGT+GGG | - | chr5.1:33691598-33691617 | MS.gene40849:CDS | 50.0% |
| AAAAGCAGGGGGAGCAGTGT+TGG | + | chr5.1:33690873-33690892 | None:intergenic | 55.0% | |
| ACGCCACCCCACGAATGAAA+TGG | + | chr5.1:33690935-33690954 | None:intergenic | 55.0% | |
| CGCCACCCCACGAATGAAAT+GGG | + | chr5.1:33690934-33690953 | None:intergenic | 55.0% | |
| GTCCCATTTCATTCGTGGGG+TGG | - | chr5.1:33690929-33690948 | MS.gene40849:CDS | 55.0% | |
| ! | GGTTGCTTTGGACGAGAAGC+TGG | - | chr5.1:33691024-33691043 | MS.gene40849:CDS | 55.0% |
| !! | GAATGCTTTGGGAGGCTCTG+TGG | - | chr5.1:33691597-33691616 | MS.gene40849:CDS | 55.0% |
| TAGGGACATGAGAGGGGCGA+GGG | - | chr5.1:33691798-33691817 | MS.gene40849:CDS | 60.0% | |
| TGGGAGGCTCTGTGGGTCTT+GGG | - | chr5.1:33691605-33691624 | MS.gene40849:CDS | 60.0% | |
| TTAGCGGGGGATGGGCCAAA+GGG | - | chr5.1:33692135-33692154 | MS.gene40849:CDS | 60.0% | |
| TTAGGGACATGAGAGGGGCG+AGG | - | chr5.1:33691797-33691816 | MS.gene40849:CDS | 60.0% | |
| TTGGGAGGCTCTGTGGGTCT+TGG | - | chr5.1:33691604-33691623 | MS.gene40849:CDS | 60.0% | |
| GGGAGGCTCTGTGGGTCTTG+GGG | - | chr5.1:33691606-33691625 | MS.gene40849:CDS | 65.0% | |
| GTTAGCGGGGGATGGGCCAA+AGG | - | chr5.1:33692134-33692153 | MS.gene40849:CDS | 65.0% | |
| TAGCGGGGGATGGGCCAAAG+GGG | - | chr5.1:33692136-33692155 | MS.gene40849:CDS | 65.0% | |
| ! | AGCAGGGGGAGCAGTGTTGG+CGG | + | chr5.1:33690870-33690889 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 33690860 | 33692404 | 33690860 | ID=MS.gene40849 |
| chr5.1 | mRNA | 33690860 | 33692404 | 33690860 | ID=MS.gene40849.t1;Parent=MS.gene40849 |
| chr5.1 | exon | 33690860 | 33692404 | 33690860 | ID=MS.gene40849.t1.exon1;Parent=MS.gene40849.t1 |
| chr5.1 | CDS | 33690860 | 33692404 | 33690860 | ID=cds.MS.gene40849.t1;Parent=MS.gene40849.t1 |
| Gene Sequence |
| Protein sequence |
