Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42296.t1 | XP_013462184.1 | 98.5 | 394 | 5 | 1 | 1 | 393 | 1 | 394 | 2.40E-195 | 691.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42296.t1 | Q94AP3 | 68.9 | 396 | 113 | 5 | 1 | 393 | 1 | 389 | 3.4e-142 | 506.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42296.t1 | A0A072V2F5 | 98.5 | 394 | 5 | 1 | 1 | 393 | 1 | 394 | 1.7e-195 | 691.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene42296 | 0.85118 | 1.05E-60 | -1.69E-46 |
| MS.gene050589 | MS.gene42296 | 0.82832 | 9.60E-55 | -1.69E-46 |
| MS.gene051067 | MS.gene42296 | 0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene051248 | MS.gene42296 | 0.812763 | 3.60E-51 | -1.69E-46 |
| MS.gene053536 | MS.gene42296 | 0.831005 | 2.13E-55 | -1.69E-46 |
| MS.gene053538 | MS.gene42296 | 0.829107 | 6.19E-55 | -1.69E-46 |
| MS.gene055777 | MS.gene42296 | 0.812318 | 4.50E-51 | -1.69E-46 |
| MS.gene056228 | MS.gene42296 | 0.833834 | 4.25E-56 | -1.69E-46 |
| MS.gene056704 | MS.gene42296 | 0.830342 | 3.10E-55 | -1.69E-46 |
| MS.gene056870 | MS.gene42296 | 0.818048 | 2.40E-52 | -1.69E-46 |
| MS.gene05709 | MS.gene42296 | 0.817011 | 4.11E-52 | -1.69E-46 |
| MS.gene05777 | MS.gene42296 | 0.809716 | 1.65E-50 | -1.69E-46 |
| MS.gene058823 | MS.gene42296 | 0.820563 | 6.42E-53 | -1.69E-46 |
| MS.gene059424 | MS.gene42296 | 0.824414 | 8.18E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42296.t1 | MTR_3g112480 | 98.477 | 394 | 5 | 1 | 1 | 393 | 1 | 394 | 0.0 | 776 |
| MS.gene42296.t1 | MTR_1g023180 | 81.841 | 402 | 62 | 5 | 1 | 393 | 1 | 400 | 0.0 | 647 |
| MS.gene42296.t1 | MTR_3g112480 | 97.538 | 325 | 7 | 1 | 70 | 393 | 15 | 339 | 0.0 | 630 |
| MS.gene42296.t1 | MTR_3g112480 | 98.502 | 267 | 3 | 1 | 128 | 393 | 1 | 267 | 0.0 | 523 |
| MS.gene42296.t1 | MTR_6g081840 | 59.659 | 352 | 128 | 5 | 29 | 376 | 19 | 360 | 3.87e-143 | 411 |
| MS.gene42296.t1 | MTR_5g021160 | 56.614 | 378 | 145 | 4 | 15 | 390 | 2 | 362 | 3.02e-142 | 409 |
| MS.gene42296.t1 | MTR_5g021160 | 54.915 | 295 | 114 | 4 | 98 | 390 | 2 | 279 | 5.42e-104 | 308 |
| MS.gene42296.t1 | MTR_5g021160 | 59.091 | 264 | 98 | 2 | 15 | 278 | 2 | 255 | 3.12e-102 | 304 |
| MS.gene42296.t1 | MTR_5g025340 | 41.033 | 368 | 204 | 5 | 17 | 376 | 7 | 369 | 1.62e-87 | 270 |
| MS.gene42296.t1 | MTR_5g025330 | 39.678 | 373 | 210 | 5 | 9 | 376 | 5 | 367 | 7.62e-85 | 269 |
| MS.gene42296.t1 | MTR_5g025290 | 41.056 | 341 | 193 | 4 | 17 | 352 | 8 | 345 | 1.24e-83 | 260 |
| MS.gene42296.t1 | MTR_5g025370 | 39.516 | 372 | 206 | 5 | 17 | 376 | 7 | 371 | 1.52e-83 | 260 |
| MS.gene42296.t1 | MTR_5g025290 | 40.395 | 354 | 197 | 6 | 10 | 352 | 23 | 373 | 1.95e-83 | 261 |
| MS.gene42296.t1 | MTR_5g025400 | 40.000 | 360 | 210 | 3 | 22 | 376 | 13 | 371 | 3.52e-82 | 256 |
| MS.gene42296.t1 | MTR_8g041390 | 40.476 | 336 | 191 | 3 | 17 | 351 | 10 | 337 | 6.47e-82 | 256 |
| MS.gene42296.t1 | MTR_1g074070 | 40.356 | 337 | 186 | 4 | 17 | 352 | 13 | 335 | 1.26e-81 | 254 |
| MS.gene42296.t1 | MTR_1g074120 | 39.169 | 337 | 190 | 3 | 17 | 352 | 13 | 335 | 3.15e-81 | 253 |
| MS.gene42296.t1 | MTR_1g074160 | 40.179 | 336 | 186 | 3 | 17 | 351 | 10 | 331 | 5.11e-81 | 252 |
| MS.gene42296.t1 | MTR_1g051120 | 38.576 | 337 | 194 | 3 | 17 | 352 | 13 | 337 | 8.49e-81 | 252 |
| MS.gene42296.t1 | MTR_3g072500 | 36.364 | 352 | 214 | 3 | 1 | 352 | 1 | 342 | 2.66e-79 | 249 |
| MS.gene42296.t1 | MTR_1g030580 | 37.912 | 364 | 206 | 3 | 17 | 372 | 13 | 364 | 1.05e-78 | 248 |
| MS.gene42296.t1 | MTR_8g072350 | 36.815 | 383 | 221 | 7 | 6 | 383 | 2 | 368 | 1.43e-78 | 247 |
| MS.gene42296.t1 | MTR_1g073990 | 40.950 | 337 | 185 | 4 | 17 | 352 | 13 | 336 | 3.02e-78 | 245 |
| MS.gene42296.t1 | MTR_1g030600 | 40.426 | 329 | 185 | 3 | 25 | 352 | 23 | 341 | 4.49e-78 | 246 |
| MS.gene42296.t1 | MTR_3g072530 | 40.303 | 330 | 177 | 4 | 26 | 350 | 20 | 334 | 8.54e-78 | 244 |
| MS.gene42296.t1 | MTR_3g012420 | 38.352 | 352 | 197 | 3 | 5 | 351 | 2 | 338 | 2.05e-76 | 242 |
| MS.gene42296.t1 | MTR_0096s0100 | 37.994 | 329 | 190 | 2 | 25 | 352 | 23 | 338 | 4.78e-76 | 240 |
| MS.gene42296.t1 | MTR_1g074020 | 38.253 | 332 | 190 | 4 | 22 | 352 | 15 | 332 | 2.83e-75 | 238 |
| MS.gene42296.t1 | MTR_3g072560 | 38.957 | 326 | 185 | 2 | 25 | 350 | 23 | 334 | 1.57e-73 | 234 |
| MS.gene42296.t1 | MTR_7g100050 | 37.190 | 363 | 210 | 4 | 24 | 380 | 17 | 367 | 2.01e-72 | 231 |
| MS.gene42296.t1 | MTR_2g065550 | 37.127 | 369 | 213 | 4 | 25 | 387 | 15 | 370 | 2.35e-72 | 231 |
| MS.gene42296.t1 | MTR_1g068630 | 35.695 | 367 | 216 | 4 | 17 | 379 | 12 | 362 | 3.85e-72 | 230 |
| MS.gene42296.t1 | MTR_1g070175 | 33.429 | 350 | 213 | 3 | 17 | 366 | 13 | 342 | 4.58e-72 | 229 |
| MS.gene42296.t1 | MTR_6g036450 | 36.735 | 343 | 207 | 3 | 14 | 356 | 10 | 342 | 2.95e-71 | 228 |
| MS.gene42296.t1 | MTR_2g016710 | 35.905 | 337 | 200 | 2 | 17 | 352 | 5 | 326 | 4.14e-71 | 227 |
| MS.gene42296.t1 | MTR_1g038560 | 36.047 | 344 | 203 | 4 | 25 | 368 | 8 | 334 | 1.81e-69 | 222 |
| MS.gene42296.t1 | MTR_8g006120 | 37.789 | 389 | 216 | 6 | 11 | 388 | 1 | 374 | 4.29e-68 | 220 |
| MS.gene42296.t1 | MTR_4g106720 | 34.743 | 331 | 203 | 3 | 23 | 352 | 14 | 332 | 5.50e-68 | 219 |
| MS.gene42296.t1 | MTR_7g111830 | 35.152 | 330 | 201 | 3 | 25 | 350 | 12 | 332 | 3.40e-67 | 218 |
| MS.gene42296.t1 | MTR_8g006010 | 36.088 | 363 | 211 | 6 | 25 | 386 | 15 | 357 | 7.84e-67 | 217 |
| MS.gene42296.t1 | MTR_1g114210 | 35.276 | 326 | 198 | 3 | 25 | 350 | 16 | 328 | 8.78e-66 | 213 |
| MS.gene42296.t1 | MTR_2g007990 | 36.232 | 345 | 211 | 2 | 13 | 357 | 8 | 343 | 2.67e-64 | 211 |
| MS.gene42296.t1 | MTR_3g072520 | 35.942 | 345 | 209 | 4 | 25 | 368 | 14 | 347 | 3.98e-64 | 210 |
| MS.gene42296.t1 | MTR_3g090550 | 35.913 | 323 | 191 | 4 | 37 | 359 | 23 | 329 | 5.09e-64 | 208 |
| MS.gene42296.t1 | MTR_2g027030 | 36.111 | 360 | 211 | 4 | 25 | 376 | 17 | 365 | 7.82e-64 | 208 |
| MS.gene42296.t1 | MTR_3g095450 | 33.898 | 354 | 224 | 2 | 22 | 373 | 7 | 352 | 1.91e-63 | 207 |
| MS.gene42296.t1 | MTR_3g095460 | 35.347 | 331 | 203 | 4 | 22 | 351 | 7 | 327 | 1.03e-62 | 205 |
| MS.gene42296.t1 | MTR_5g034990 | 36.982 | 338 | 194 | 4 | 33 | 370 | 27 | 345 | 2.42e-62 | 204 |
| MS.gene42296.t1 | MTR_8g006090 | 37.027 | 370 | 202 | 6 | 25 | 390 | 16 | 358 | 5.16e-61 | 201 |
| MS.gene42296.t1 | MTR_3g095420 | 33.233 | 331 | 211 | 2 | 22 | 350 | 9 | 331 | 1.55e-60 | 200 |
| MS.gene42296.t1 | MTR_8g092650 | 33.828 | 337 | 213 | 2 | 17 | 351 | 2 | 330 | 1.56e-60 | 199 |
| MS.gene42296.t1 | MTR_1g030400 | 31.858 | 339 | 222 | 2 | 29 | 364 | 16 | 348 | 3.98e-60 | 199 |
| MS.gene42296.t1 | MTR_2g007960 | 35.897 | 351 | 209 | 3 | 25 | 369 | 17 | 357 | 4.82e-60 | 199 |
| MS.gene42296.t1 | MTR_2g016710 | 34.615 | 312 | 190 | 2 | 17 | 328 | 5 | 302 | 9.55e-60 | 196 |
| MS.gene42296.t1 | MTR_4g129650 | 34.133 | 375 | 216 | 7 | 25 | 393 | 13 | 362 | 6.21e-59 | 196 |
| MS.gene42296.t1 | MTR_2g007970 | 35.043 | 351 | 215 | 5 | 25 | 374 | 17 | 355 | 1.05e-58 | 196 |
| MS.gene42296.t1 | MTR_2g007260 | 34.133 | 375 | 233 | 3 | 25 | 393 | 19 | 385 | 2.18e-58 | 196 |
| MS.gene42296.t1 | MTR_3g072500 | 39.759 | 249 | 140 | 3 | 104 | 352 | 1 | 239 | 5.40e-57 | 188 |
| MS.gene42296.t1 | MTR_3g072500 | 34.892 | 278 | 171 | 3 | 1 | 278 | 1 | 268 | 3.71e-55 | 183 |
| MS.gene42296.t1 | MTR_2g102340 | 33.435 | 329 | 205 | 2 | 25 | 352 | 17 | 332 | 4.08e-55 | 186 |
| MS.gene42296.t1 | MTR_3g095440 | 32.768 | 354 | 228 | 3 | 22 | 373 | 7 | 352 | 5.79e-54 | 182 |
| MS.gene42296.t1 | MTR_4g094342 | 32.258 | 341 | 214 | 2 | 10 | 345 | 3 | 331 | 7.88e-54 | 182 |
| MS.gene42296.t1 | MTR_4g094352 | 33.512 | 373 | 236 | 4 | 25 | 393 | 17 | 381 | 2.35e-53 | 182 |
| MS.gene42296.t1 | MTR_8g006090 | 38.000 | 300 | 162 | 4 | 91 | 390 | 3 | 278 | 4.03e-53 | 178 |
| MS.gene42296.t1 | MTR_5g034910 | 31.378 | 341 | 220 | 4 | 17 | 356 | 4 | 331 | 1.86e-52 | 178 |
| MS.gene42296.t1 | MTR_8g006050 | 34.754 | 305 | 171 | 5 | 51 | 352 | 25 | 304 | 2.48e-52 | 178 |
| MS.gene42296.t1 | MTR_1g074160 | 37.786 | 262 | 148 | 3 | 17 | 277 | 10 | 257 | 6.59e-52 | 174 |
| MS.gene42296.t1 | MTR_3g072530 | 36.177 | 293 | 129 | 5 | 26 | 275 | 20 | 297 | 1.63e-51 | 175 |
| MS.gene42296.t1 | MTR_4g094362 | 30.707 | 368 | 244 | 4 | 25 | 392 | 19 | 375 | 3.82e-51 | 176 |
| MS.gene42296.t1 | MTR_5g068790 | 29.650 | 371 | 240 | 4 | 14 | 374 | 9 | 368 | 5.59e-50 | 173 |
| MS.gene42296.t1 | MTR_4g094360 | 31.672 | 341 | 224 | 3 | 25 | 365 | 19 | 350 | 1.07e-49 | 172 |
| MS.gene42296.t1 | MTR_5g034980 | 30.514 | 331 | 210 | 4 | 25 | 351 | 12 | 326 | 1.58e-49 | 171 |
| MS.gene42296.t1 | MTR_5g069040 | 30.239 | 377 | 250 | 4 | 14 | 384 | 9 | 378 | 1.48e-48 | 169 |
| MS.gene42296.t1 | MTR_3g019050 | 32.722 | 327 | 209 | 2 | 24 | 350 | 22 | 337 | 4.67e-48 | 168 |
| MS.gene42296.t1 | MTR_5g034930 | 32.153 | 339 | 208 | 6 | 23 | 356 | 9 | 330 | 4.35e-47 | 164 |
| MS.gene42296.t1 | MTR_8g006090 | 37.134 | 307 | 176 | 5 | 25 | 328 | 16 | 308 | 4.38e-47 | 163 |
| MS.gene42296.t1 | MTR_4g094340 | 32.011 | 353 | 214 | 7 | 25 | 368 | 14 | 349 | 1.51e-46 | 163 |
| MS.gene42296.t1 | MTR_4g094340 | 32.011 | 353 | 214 | 7 | 25 | 368 | 32 | 367 | 2.29e-46 | 163 |
| MS.gene42296.t1 | MTR_8g092650 | 34.749 | 259 | 159 | 2 | 95 | 351 | 2 | 252 | 1.12e-45 | 158 |
| MS.gene42296.t1 | MTR_1g014510 | 32.326 | 331 | 211 | 5 | 23 | 351 | 14 | 333 | 1.89e-44 | 160 |
| MS.gene42296.t1 | MTR_4g100840 | 30.579 | 363 | 221 | 8 | 9 | 359 | 3 | 346 | 3.16e-43 | 154 |
| MS.gene42296.t1 | MTR_5g034970 | 31.214 | 346 | 205 | 5 | 15 | 356 | 2 | 318 | 1.24e-42 | 152 |
| MS.gene42296.t1 | MTR_5g089390 | 28.440 | 327 | 217 | 1 | 24 | 350 | 18 | 327 | 8.01e-42 | 150 |
| MS.gene42296.t1 | MTR_4g129650 | 31.900 | 279 | 164 | 5 | 117 | 393 | 1 | 255 | 1.46e-41 | 147 |
| MS.gene42296.t1 | MTR_5g012650 | 32.845 | 341 | 205 | 9 | 17 | 350 | 5 | 328 | 1.26e-40 | 147 |
| MS.gene42296.t1 | MTR_4g094340 | 34.432 | 273 | 160 | 4 | 99 | 365 | 21 | 280 | 1.38e-40 | 145 |
| MS.gene42296.t1 | MTR_3g072500 | 33.772 | 228 | 141 | 3 | 1 | 228 | 1 | 218 | 1.62e-40 | 143 |
| MS.gene42296.t1 | MTR_0103s0090 | 30.518 | 367 | 222 | 7 | 24 | 388 | 15 | 350 | 1.83e-40 | 147 |
| MS.gene42296.t1 | MTR_4g094360 | 32.090 | 268 | 173 | 3 | 98 | 365 | 45 | 303 | 9.65e-40 | 145 |
| MS.gene42296.t1 | MTR_1g051120 | 33.188 | 229 | 125 | 4 | 10 | 229 | 4 | 213 | 8.23e-39 | 139 |
| MS.gene42296.t1 | MTR_4g094360 | 30.921 | 304 | 201 | 3 | 25 | 328 | 19 | 313 | 1.36e-38 | 141 |
| MS.gene42296.t1 | MTR_3g095440 | 34.694 | 245 | 150 | 3 | 22 | 264 | 7 | 243 | 2.43e-38 | 139 |
| MS.gene42296.t1 | MTR_6g007750 | 28.779 | 344 | 219 | 9 | 40 | 376 | 32 | 356 | 2.94e-38 | 141 |
| MS.gene42296.t1 | MTR_1g051120 | 33.628 | 226 | 122 | 4 | 10 | 226 | 4 | 210 | 3.14e-38 | 139 |
| MS.gene42296.t1 | MTR_6g007743 | 27.795 | 331 | 218 | 6 | 40 | 368 | 32 | 343 | 2.46e-36 | 136 |
| MS.gene42296.t1 | MTR_0103s0090 | 30.634 | 284 | 168 | 2 | 105 | 388 | 5 | 259 | 2.30e-35 | 131 |
| MS.gene42296.t1 | MTR_1g052205 | 31.696 | 224 | 129 | 4 | 133 | 352 | 13 | 216 | 1.86e-33 | 125 |
| MS.gene42296.t1 | MTR_6g007760 | 27.759 | 299 | 200 | 5 | 34 | 330 | 25 | 309 | 4.18e-33 | 126 |
| MS.gene42296.t1 | MTR_6g007747 | 30.769 | 312 | 199 | 4 | 40 | 351 | 32 | 326 | 5.33e-33 | 127 |
| MS.gene42296.t1 | MTR_6g007753 | 28.254 | 315 | 205 | 6 | 63 | 373 | 337 | 634 | 9.62e-33 | 130 |
| MS.gene42296.t1 | MTR_6g007753 | 26.000 | 250 | 168 | 4 | 125 | 373 | 77 | 310 | 9.40e-21 | 94.7 |
| MS.gene42296.t1 | MTR_6g007757 | 30.117 | 342 | 220 | 6 | 40 | 379 | 32 | 356 | 6.34e-32 | 124 |
| MS.gene42296.t1 | MTR_6g007740 | 26.901 | 342 | 229 | 6 | 29 | 368 | 21 | 343 | 3.50e-29 | 118 |
| MS.gene42296.t1 | MTR_5g034980 | 30.233 | 258 | 160 | 4 | 25 | 278 | 12 | 253 | 1.04e-28 | 114 |
| MS.gene42296.t1 | MTR_8g006090 | 36.437 | 247 | 140 | 5 | 25 | 268 | 16 | 248 | 5.93e-28 | 112 |
| MS.gene42296.t1 | MTR_2g102340 | 29.412 | 255 | 166 | 2 | 25 | 278 | 43 | 284 | 7.44e-28 | 112 |
| MS.gene42296.t1 | MTR_4g094340 | 28.352 | 261 | 163 | 6 | 25 | 278 | 14 | 257 | 2.36e-21 | 93.2 |
| MS.gene42296.t1 | MTR_4g094340 | 28.352 | 261 | 163 | 6 | 25 | 278 | 32 | 275 | 4.80e-21 | 92.4 |
| MS.gene42296.t1 | MTR_8g006090 | 37.079 | 178 | 100 | 2 | 91 | 268 | 3 | 168 | 9.60e-21 | 90.1 |
| MS.gene42296.t1 | MTR_4g094342 | 27.193 | 228 | 149 | 2 | 10 | 232 | 3 | 218 | 1.11e-19 | 88.2 |
| MS.gene42296.t1 | MTR_6g007757 | 30.263 | 228 | 141 | 5 | 40 | 265 | 32 | 243 | 1.48e-19 | 88.2 |
| MS.gene42296.t1 | MTR_1g068720 | 33.582 | 134 | 86 | 3 | 222 | 352 | 92 | 225 | 1.35e-16 | 79.0 |
| MS.gene42296.t1 | MTR_4g094340 | 28.846 | 208 | 124 | 6 | 25 | 225 | 32 | 222 | 7.21e-14 | 70.9 |
| MS.gene42296.t1 | MTR_4g094348 | 37.209 | 129 | 78 | 1 | 105 | 233 | 7 | 132 | 9.81e-14 | 69.3 |
| MS.gene42296.t1 | MTR_1g014790 | 36.220 | 127 | 71 | 2 | 99 | 225 | 42 | 158 | 1.23e-13 | 69.7 |
| MS.gene42296.t1 | MTR_3g093450 | 29.710 | 138 | 67 | 2 | 221 | 349 | 62 | 178 | 1.09e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42296.t1 | AT1G75500 | 74.495 | 396 | 91 | 5 | 1 | 393 | 1 | 389 | 0.0 | 585 |
| MS.gene42296.t1 | AT1G75500 | 74.495 | 396 | 91 | 5 | 1 | 393 | 1 | 389 | 0.0 | 585 |
| MS.gene42296.t1 | AT3G53210 | 55.968 | 377 | 152 | 4 | 15 | 388 | 4 | 369 | 2.13e-146 | 420 |
| MS.gene42296.t1 | AT3G18200 | 57.104 | 366 | 141 | 3 | 15 | 380 | 29 | 378 | 1.31e-145 | 418 |
| MS.gene42296.t1 | AT3G53210 | 60.606 | 264 | 93 | 2 | 15 | 278 | 4 | 256 | 4.09e-110 | 323 |
| MS.gene42296.t1 | AT3G53210 | 52.862 | 297 | 126 | 4 | 95 | 388 | 27 | 312 | 2.19e-104 | 311 |
| MS.gene42296.t1 | AT3G18200 | 53.788 | 264 | 106 | 3 | 117 | 380 | 1 | 248 | 1.63e-93 | 281 |
| MS.gene42296.t1 | AT4G30420 | 39.481 | 385 | 212 | 6 | 17 | 393 | 5 | 376 | 1.88e-81 | 254 |
| MS.gene42296.t1 | AT4G30420 | 39.947 | 378 | 206 | 6 | 24 | 393 | 2 | 366 | 2.84e-81 | 254 |
| MS.gene42296.t1 | AT5G07050 | 37.845 | 362 | 212 | 4 | 24 | 380 | 21 | 374 | 1.96e-79 | 250 |
| MS.gene42296.t1 | AT4G08300 | 37.838 | 333 | 198 | 2 | 24 | 356 | 14 | 337 | 4.41e-77 | 243 |
| MS.gene42296.t1 | AT4G08290 | 36.000 | 375 | 220 | 3 | 17 | 381 | 9 | 373 | 7.51e-77 | 243 |
| MS.gene42296.t1 | AT1G44800 | 34.530 | 362 | 223 | 3 | 17 | 376 | 7 | 356 | 3.36e-76 | 241 |
| MS.gene42296.t1 | AT5G45370 | 37.234 | 376 | 213 | 6 | 17 | 386 | 16 | 374 | 1.10e-75 | 239 |
| MS.gene42296.t1 | AT5G45370 | 37.234 | 376 | 213 | 6 | 17 | 386 | 16 | 374 | 1.10e-75 | 239 |
| MS.gene42296.t1 | AT5G45370 | 37.466 | 371 | 195 | 6 | 17 | 386 | 16 | 350 | 1.70e-75 | 238 |
| MS.gene42296.t1 | AT1G21890 | 37.313 | 335 | 207 | 1 | 22 | 356 | 12 | 343 | 1.92e-74 | 237 |
| MS.gene42296.t1 | AT2G39510 | 36.220 | 381 | 213 | 8 | 25 | 393 | 12 | 374 | 6.22e-74 | 235 |
| MS.gene42296.t1 | AT3G45870 | 40.909 | 330 | 191 | 4 | 17 | 345 | 8 | 334 | 1.15e-72 | 232 |
| MS.gene42296.t1 | AT2G40900 | 36.620 | 355 | 203 | 3 | 11 | 360 | 1 | 338 | 4.48e-71 | 228 |
| MS.gene42296.t1 | AT4G19185 | 37.433 | 374 | 216 | 5 | 22 | 392 | 22 | 380 | 1.47e-70 | 227 |
| MS.gene42296.t1 | AT1G09380 | 38.769 | 325 | 191 | 2 | 24 | 348 | 11 | 327 | 3.44e-70 | 225 |
| MS.gene42296.t1 | AT5G13670 | 35.417 | 336 | 206 | 3 | 17 | 351 | 4 | 329 | 1.06e-67 | 219 |
| MS.gene42296.t1 | AT3G45870 | 40.256 | 313 | 183 | 4 | 17 | 328 | 8 | 317 | 4.27e-67 | 216 |
| MS.gene42296.t1 | AT2G37460 | 37.391 | 345 | 195 | 6 | 17 | 357 | 11 | 338 | 4.55e-67 | 217 |
| MS.gene42296.t1 | AT4G01440 | 38.217 | 314 | 180 | 2 | 40 | 352 | 29 | 329 | 4.28e-66 | 214 |
| MS.gene42296.t1 | AT3G30340 | 33.636 | 330 | 202 | 2 | 25 | 351 | 15 | 330 | 2.26e-65 | 213 |
| MS.gene42296.t1 | AT1G11450 | 36.522 | 345 | 200 | 3 | 25 | 368 | 20 | 346 | 3.65e-65 | 211 |
| MS.gene42296.t1 | AT1G01070 | 34.795 | 365 | 220 | 4 | 15 | 372 | 10 | 363 | 1.40e-64 | 211 |
| MS.gene42296.t1 | AT4G01430 | 35.549 | 346 | 209 | 5 | 40 | 381 | 28 | 363 | 1.37e-63 | 208 |
| MS.gene42296.t1 | AT1G21890 | 36.482 | 307 | 192 | 1 | 22 | 328 | 12 | 315 | 1.54e-62 | 204 |
| MS.gene42296.t1 | AT3G56620 | 34.911 | 338 | 204 | 2 | 11 | 348 | 1 | 322 | 2.40e-62 | 205 |
| MS.gene42296.t1 | AT1G43650 | 34.524 | 336 | 201 | 3 | 22 | 355 | 8 | 326 | 4.09e-62 | 203 |
| MS.gene42296.t1 | AT1G11450 | 37.500 | 320 | 181 | 3 | 50 | 368 | 1 | 302 | 1.25e-61 | 201 |
| MS.gene42296.t1 | AT4G01440 | 38.276 | 290 | 165 | 2 | 40 | 328 | 29 | 305 | 1.45e-60 | 199 |
| MS.gene42296.t1 | AT1G11450 | 37.942 | 311 | 174 | 3 | 59 | 368 | 3 | 295 | 4.06e-60 | 197 |
| MS.gene42296.t1 | AT1G11460 | 34.954 | 329 | 201 | 3 | 25 | 352 | 20 | 336 | 3.73e-58 | 193 |
| MS.gene42296.t1 | AT5G64700 | 34.154 | 325 | 209 | 2 | 28 | 352 | 15 | 334 | 1.40e-56 | 189 |
| MS.gene42296.t1 | AT3G45870 | 41.065 | 263 | 151 | 4 | 17 | 278 | 8 | 267 | 3.03e-55 | 184 |
| MS.gene42296.t1 | AT4G28040 | 30.833 | 360 | 220 | 6 | 17 | 373 | 4 | 337 | 3.31e-55 | 186 |
| MS.gene42296.t1 | AT4G28040 | 30.833 | 360 | 220 | 6 | 17 | 373 | 4 | 337 | 3.31e-55 | 186 |
| MS.gene42296.t1 | AT4G28040 | 30.833 | 360 | 220 | 6 | 17 | 373 | 4 | 337 | 3.31e-55 | 186 |
| MS.gene42296.t1 | AT4G28040 | 30.833 | 360 | 220 | 6 | 17 | 373 | 4 | 337 | 3.31e-55 | 186 |
| MS.gene42296.t1 | AT4G28040 | 30.833 | 360 | 220 | 6 | 17 | 373 | 4 | 337 | 3.31e-55 | 186 |
| MS.gene42296.t1 | AT1G11450 | 35.738 | 305 | 182 | 2 | 25 | 328 | 20 | 311 | 1.83e-54 | 183 |
| MS.gene42296.t1 | AT1G01070 | 35.463 | 313 | 184 | 4 | 67 | 372 | 15 | 316 | 4.43e-54 | 182 |
| MS.gene42296.t1 | AT4G19185 | 35.762 | 302 | 176 | 5 | 94 | 392 | 16 | 302 | 1.41e-53 | 181 |
| MS.gene42296.t1 | AT4G01430 | 36.082 | 291 | 174 | 3 | 40 | 328 | 28 | 308 | 5.47e-53 | 179 |
| MS.gene42296.t1 | AT4G08290 | 37.548 | 261 | 153 | 2 | 17 | 277 | 9 | 259 | 3.19e-52 | 176 |
| MS.gene42296.t1 | AT1G68170 | 31.443 | 388 | 232 | 5 | 13 | 393 | 5 | 365 | 4.55e-52 | 178 |
| MS.gene42296.t1 | AT1G25270 | 33.718 | 347 | 206 | 4 | 24 | 366 | 6 | 332 | 1.18e-51 | 176 |
| MS.gene42296.t1 | AT1G68170 | 32.011 | 378 | 223 | 5 | 23 | 393 | 5 | 355 | 1.99e-51 | 176 |
| MS.gene42296.t1 | AT5G45370 | 36.332 | 289 | 161 | 6 | 104 | 386 | 1 | 272 | 7.05e-51 | 172 |
| MS.gene42296.t1 | AT5G45370 | 36.332 | 289 | 161 | 6 | 104 | 386 | 1 | 272 | 7.05e-51 | 172 |
| MS.gene42296.t1 | AT2G37450 | 31.250 | 368 | 204 | 8 | 25 | 388 | 13 | 335 | 1.36e-50 | 173 |
| MS.gene42296.t1 | AT1G11450 | 37.638 | 271 | 150 | 3 | 99 | 368 | 2 | 254 | 1.94e-49 | 168 |
| MS.gene42296.t1 | AT4G01440 | 39.167 | 240 | 132 | 2 | 40 | 278 | 29 | 255 | 1.61e-48 | 166 |
| MS.gene42296.t1 | AT4G01450 | 36.218 | 312 | 181 | 2 | 40 | 350 | 29 | 323 | 1.20e-47 | 166 |
| MS.gene42296.t1 | AT5G40210 | 30.659 | 349 | 203 | 10 | 24 | 367 | 16 | 330 | 6.45e-47 | 164 |
| MS.gene42296.t1 | AT4G01450 | 36.207 | 290 | 167 | 2 | 40 | 328 | 29 | 301 | 3.19e-46 | 162 |
| MS.gene42296.t1 | AT5G40230 | 29.231 | 390 | 246 | 9 | 1 | 382 | 1 | 368 | 7.23e-45 | 159 |
| MS.gene42296.t1 | AT5G40240 | 30.330 | 333 | 215 | 4 | 23 | 351 | 22 | 341 | 1.03e-44 | 159 |
| MS.gene42296.t1 | AT5G40240 | 30.330 | 333 | 215 | 4 | 23 | 351 | 22 | 341 | 1.03e-44 | 159 |
| MS.gene42296.t1 | AT5G40240 | 30.330 | 333 | 215 | 4 | 23 | 351 | 36 | 355 | 1.74e-44 | 158 |
| MS.gene42296.t1 | AT1G70260 | 29.558 | 362 | 233 | 5 | 37 | 392 | 28 | 373 | 4.25e-44 | 157 |
| MS.gene42296.t1 | AT3G28050 | 29.600 | 375 | 233 | 10 | 24 | 392 | 15 | 364 | 1.19e-43 | 155 |
| MS.gene42296.t1 | AT4G01440 | 36.564 | 227 | 130 | 2 | 122 | 347 | 3 | 216 | 2.10e-43 | 152 |
| MS.gene42296.t1 | AT4G01440 | 36.564 | 227 | 130 | 2 | 122 | 347 | 3 | 216 | 2.10e-43 | 152 |
| MS.gene42296.t1 | AT3G28130 | 31.751 | 337 | 210 | 8 | 21 | 352 | 13 | 334 | 6.56e-43 | 153 |
| MS.gene42296.t1 | AT3G30340 | 31.907 | 257 | 158 | 2 | 25 | 278 | 15 | 257 | 1.43e-42 | 150 |
| MS.gene42296.t1 | AT3G28130 | 33.068 | 251 | 156 | 4 | 103 | 352 | 9 | 248 | 6.23e-40 | 143 |
| MS.gene42296.t1 | AT3G28130 | 33.068 | 251 | 156 | 4 | 103 | 352 | 9 | 248 | 6.23e-40 | 143 |
| MS.gene42296.t1 | AT4G01450 | 35.833 | 240 | 136 | 2 | 40 | 278 | 29 | 251 | 6.85e-39 | 140 |
| MS.gene42296.t1 | AT5G47470 | 28.940 | 349 | 217 | 5 | 10 | 350 | 47 | 372 | 2.67e-38 | 142 |
| MS.gene42296.t1 | AT5G47470 | 28.986 | 345 | 222 | 6 | 10 | 350 | 19 | 344 | 3.11e-38 | 141 |
| MS.gene42296.t1 | AT3G28100 | 30.746 | 335 | 213 | 9 | 23 | 352 | 16 | 336 | 3.35e-38 | 141 |
| MS.gene42296.t1 | AT5G47470 | 28.940 | 349 | 217 | 5 | 10 | 350 | 47 | 372 | 3.43e-38 | 141 |
| MS.gene42296.t1 | AT5G45370 | 34.496 | 258 | 146 | 6 | 135 | 386 | 74 | 314 | 3.68e-38 | 140 |
| MS.gene42296.t1 | AT3G45870 | 38.318 | 214 | 128 | 4 | 133 | 345 | 49 | 259 | 3.87e-38 | 139 |
| MS.gene42296.t1 | AT2G37450 | 31.707 | 287 | 168 | 6 | 106 | 388 | 1 | 263 | 5.25e-38 | 138 |
| MS.gene42296.t1 | AT3G28070 | 29.008 | 262 | 174 | 3 | 104 | 364 | 8 | 258 | 1.99e-37 | 136 |
| MS.gene42296.t1 | AT3G28080 | 30.566 | 265 | 167 | 5 | 104 | 364 | 8 | 259 | 5.61e-37 | 135 |
| MS.gene42296.t1 | AT3G28080 | 30.566 | 265 | 167 | 5 | 104 | 364 | 8 | 259 | 5.61e-37 | 135 |
| MS.gene42296.t1 | AT3G28080 | 30.566 | 265 | 167 | 5 | 104 | 364 | 8 | 259 | 5.61e-37 | 135 |
| MS.gene42296.t1 | AT3G28080 | 30.566 | 265 | 167 | 5 | 104 | 364 | 8 | 259 | 5.61e-37 | 135 |
| MS.gene42296.t1 | AT3G28070 | 29.008 | 262 | 174 | 3 | 104 | 364 | 100 | 350 | 1.98e-36 | 136 |
| MS.gene42296.t1 | AT3G28080 | 30.566 | 265 | 167 | 5 | 104 | 364 | 89 | 340 | 2.94e-36 | 135 |
| MS.gene42296.t1 | AT3G28080 | 30.566 | 265 | 167 | 5 | 104 | 364 | 97 | 348 | 3.25e-36 | 135 |
| MS.gene42296.t1 | AT4G15540 | 29.429 | 333 | 205 | 7 | 23 | 351 | 19 | 325 | 1.88e-34 | 130 |
| MS.gene42296.t1 | AT4G15540 | 29.429 | 333 | 205 | 7 | 23 | 351 | 19 | 325 | 1.88e-34 | 130 |
| MS.gene42296.t1 | AT1G43650 | 32.171 | 258 | 156 | 3 | 22 | 277 | 8 | 248 | 2.59e-34 | 128 |
| MS.gene42296.t1 | AT1G60050 | 29.063 | 320 | 217 | 3 | 37 | 352 | 29 | 342 | 2.61e-34 | 131 |
| MS.gene42296.t1 | AT5G64700 | 33.755 | 237 | 152 | 2 | 28 | 264 | 15 | 246 | 2.99e-34 | 128 |
| MS.gene42296.t1 | AT4G16620 | 30.579 | 363 | 223 | 10 | 29 | 386 | 20 | 358 | 4.21e-34 | 130 |
| MS.gene42296.t1 | AT4G01450 | 37.500 | 208 | 112 | 2 | 40 | 246 | 29 | 219 | 1.98e-33 | 125 |
| MS.gene42296.t1 | AT3G45870 | 37.056 | 197 | 120 | 4 | 133 | 328 | 49 | 242 | 6.07e-33 | 124 |
| MS.gene42296.t1 | AT3G45870 | 37.056 | 197 | 120 | 4 | 133 | 328 | 49 | 242 | 6.07e-33 | 124 |
| MS.gene42296.t1 | AT4G01430 | 31.915 | 235 | 147 | 4 | 150 | 381 | 2 | 226 | 1.26e-32 | 122 |
| MS.gene42296.t1 | AT3G45870 | 42.254 | 142 | 81 | 1 | 204 | 345 | 43 | 183 | 1.89e-30 | 117 |
| MS.gene42296.t1 | AT4G24980 | 29.841 | 315 | 143 | 9 | 37 | 351 | 3 | 239 | 1.09e-28 | 113 |
| MS.gene42296.t1 | AT2G37450 | 32.571 | 175 | 110 | 2 | 215 | 388 | 129 | 296 | 3.52e-28 | 112 |
| MS.gene42296.t1 | AT3G28130 | 30.455 | 220 | 141 | 4 | 134 | 352 | 1 | 209 | 1.04e-27 | 109 |
| MS.gene42296.t1 | AT3G28070 | 27.434 | 226 | 152 | 3 | 104 | 328 | 100 | 314 | 8.10e-27 | 109 |
| MS.gene42296.t1 | AT3G28070 | 25.862 | 232 | 160 | 3 | 134 | 364 | 1 | 221 | 6.99e-25 | 102 |
| MS.gene42296.t1 | AT3G28080 | 27.234 | 235 | 154 | 5 | 134 | 364 | 1 | 222 | 1.64e-24 | 100 |
| MS.gene42296.t1 | AT4G16620 | 30.526 | 285 | 170 | 9 | 106 | 386 | 1 | 261 | 1.20e-22 | 96.7 |
| MS.gene42296.t1 | AT4G16620 | 30.526 | 285 | 170 | 9 | 106 | 386 | 1 | 261 | 1.20e-22 | 96.7 |
| MS.gene42296.t1 | AT3G45870 | 37.241 | 145 | 87 | 4 | 135 | 278 | 4 | 145 | 1.67e-21 | 90.5 |
| MS.gene42296.t1 | AT3G45870 | 37.415 | 147 | 88 | 4 | 133 | 278 | 49 | 192 | 2.59e-21 | 91.7 |
| MS.gene42296.t1 | AT4G16620 | 31.507 | 219 | 135 | 4 | 29 | 246 | 20 | 224 | 7.82e-21 | 91.7 |
| MS.gene42296.t1 | AT3G28130 | 29.644 | 253 | 157 | 8 | 21 | 267 | 13 | 250 | 3.47e-20 | 89.7 |
| MS.gene42296.t1 | AT3G28100 | 29.457 | 258 | 165 | 7 | 23 | 276 | 16 | 260 | 3.21e-18 | 84.3 |
| MS.gene42296.t1 | AT3G28130 | 34.591 | 159 | 96 | 4 | 21 | 175 | 13 | 167 | 5.60e-18 | 82.4 |
| MS.gene42296.t1 | AT3G28100 | 34.839 | 155 | 97 | 3 | 23 | 175 | 16 | 168 | 2.33e-16 | 78.6 |
| MS.gene42296.t1 | AT3G28080 | 44.737 | 76 | 40 | 1 | 104 | 177 | 8 | 83 | 1.39e-13 | 69.7 |
| MS.gene42296.t1 | AT3G28080 | 31.132 | 106 | 62 | 3 | 269 | 364 | 101 | 205 | 6.97e-12 | 65.1 |
| MS.gene42296.t1 | AT3G28080 | 44.737 | 76 | 40 | 1 | 104 | 177 | 97 | 172 | 4.56e-13 | 69.7 |
| MS.gene42296.t1 | AT3G28080 | 31.132 | 106 | 62 | 3 | 269 | 364 | 190 | 294 | 1.26e-11 | 65.5 |
Find 111 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCTTGTTGTGGCTATTA+TGG | 0.204204 | 3.2:-89770445 | MS.gene42296:CDS |
| CCTCTAAACAGCAGCATTAA+TGG | 0.217047 | 3.2:-89772128 | MS.gene42296:CDS |
| CTTGGATGTTTGTACCTTAT+AGG | 0.224383 | 3.2:-89772035 | MS.gene42296:CDS |
| GCAATAATATTGCGGTAAAC+TGG | 0.242432 | 3.2:+89773074 | None:intergenic |
| ACTTCTTATACATGTTTCTT+TGG | 0.256420 | 3.2:-89771936 | MS.gene42296:CDS |
| TTTAGGAGAAGAGTTCTATT+TGG | 0.258282 | 3.2:-89770412 | MS.gene42296:CDS |
| TCAAAGCAATAATGAGAAAT+TGG | 0.266484 | 3.2:+89771907 | None:intergenic |
| TGATACACCGCAACGAAAAC+TGG | 0.280768 | 3.2:+89770477 | None:intergenic |
| ATTATGGCTTCCCTTGCTTT+AGG | 0.284109 | 3.2:-89770429 | MS.gene42296:CDS |
| CCATTAATGCTGCTGTTTAG+AGG | 0.328701 | 3.2:+89772128 | None:intergenic |
| GCTGATTCAGGTGGATCTTC+GGG | 0.328958 | 3.2:-89773227 | MS.gene42296:CDS |
| TTAGGAGAAGAGTTCTATTT+GGG | 0.354674 | 3.2:-89770411 | MS.gene42296:CDS |
| GGCTGATTCAGGTGGATCTT+CGG | 0.355763 | 3.2:-89773228 | MS.gene42296:CDS |
| AGGTTGAGAAAGTGATGTTT+TGG | 0.357252 | 3.2:+89769566 | None:intergenic |
| CTCAATCTCATCACTGGGAT+TGG | 0.359629 | 3.2:-89772084 | MS.gene42296:CDS |
| GCCATGTTGGCCCTGCAGTT+TGG | 0.363749 | 3.2:-89773161 | MS.gene42296:CDS |
| ATGACAAACAATGTCCTATA+AGG | 0.364535 | 3.2:+89772021 | None:intergenic |
| GCCCTGCAGTTTGGATATGC+AGG | 0.381834 | 3.2:-89773152 | MS.gene42296:CDS |
| TTTGTCATGGTCTGGTTGGC+TGG | 0.389764 | 3.2:-89772006 | MS.gene42296:CDS |
| AATACAGTAATGGCTGATTC+AGG | 0.391933 | 3.2:-89773239 | None:intergenic |
| AACCAGGGTTTCTACTTGCT+TGG | 0.399423 | 3.2:-89772443 | MS.gene42296:CDS |
| AAGCCTGAGCATCTCTTTCA+AGG | 0.401704 | 3.2:+89771883 | None:intergenic |
| TTGTGATGTTACAGGATCAT+TGG | 0.404975 | 3.2:-89769723 | MS.gene42296:intron |
| CTCAATCTCAATCTCATCAC+TGG | 0.407185 | 3.2:-89772090 | MS.gene42296:CDS |
| GGACATTGTTTGTCATGGTC+TGG | 0.421517 | 3.2:-89772014 | MS.gene42296:CDS |
| GGGGTTATACCTAGTGTTGT+GGG | 0.425622 | 3.2:-89769682 | MS.gene42296:CDS |
| CTGCTGTTTAGAGGTGGAAC+TGG | 0.427694 | 3.2:+89772137 | None:intergenic |
| CGGAGCATAGTAACATAATC+AGG | 0.429439 | 3.2:-89769605 | MS.gene42296:CDS |
| TTGCATTCGCTGTACAGATA+TGG | 0.431672 | 3.2:-89770518 | MS.gene42296:CDS |
| TCAGCTGCATGCGGCCATGT+TGG | 0.431764 | 3.2:-89773174 | MS.gene42296:CDS |
| CTCAAGAGCTGCACTTAACA+TGG | 0.436174 | 3.2:-89773117 | MS.gene42296:CDS |
| GATCCTTGAAAGAGATGCTC+AGG | 0.436181 | 3.2:-89771886 | MS.gene42296:CDS |
| GCATGCAGCTGAAACCGTTC+TGG | 0.437452 | 3.2:+89773185 | None:intergenic |
| TCAATCTCATCACTGGGATT+GGG | 0.458072 | 3.2:-89772083 | MS.gene42296:CDS |
| GGAGCAGTGTTGATCATTGT+GGG | 0.460894 | 3.2:-89769702 | MS.gene42296:CDS |
| GGGTTTCTACTTGCTTGGCT+TGG | 0.462522 | 3.2:-89772438 | MS.gene42296:CDS |
| GGCGAGCCGGATACTTCTTA+AGG | 0.463392 | 3.2:+89771967 | None:intergenic |
| GCCACAACAAGAGTTTGAAC+AGG | 0.464692 | 3.2:+89770453 | None:intergenic |
| TTGAAAGAGATGCTCAGGCT+TGG | 0.468366 | 3.2:-89771881 | MS.gene42296:CDS |
| TGGGGTTATACCTAGTGTTG+TGG | 0.473197 | 3.2:-89769683 | MS.gene42296:CDS |
| ATTGTTTGTCATGGTCTGGT+TGG | 0.476353 | 3.2:-89772010 | MS.gene42296:CDS |
| CAGCTGAAACCGTTCTGGTA+TGG | 0.479979 | 3.2:+89773190 | None:intergenic |
| TTGAGCAGAAAGGATGGAAT+AGG | 0.486366 | 3.2:-89772236 | MS.gene42296:CDS |
| TTGCAGGGAGTAGTGGCATC+AGG | 0.488447 | 3.2:-89770543 | MS.gene42296:intron |
| ACCTGTCCTTAAGAAGTATC+CGG | 0.489808 | 3.2:-89771973 | MS.gene42296:CDS |
| CAGATATGGTGCATTGATAG+AGG | 0.493778 | 3.2:-89770504 | MS.gene42296:CDS |
| ACCCTGCATATCCAAACTGC+AGG | 0.493851 | 3.2:+89773150 | None:intergenic |
| ATACAATTTCAGAATAGAAA+AGG | 0.499386 | 3.2:-89772264 | MS.gene42296:intron |
| AAAGAAATTTGCAAGGGAGC+TGG | 0.500926 | 3.2:-89769646 | MS.gene42296:CDS |
| TTATAGGACATTGTTTGTCA+TGG | 0.505005 | 3.2:-89772019 | MS.gene42296:CDS |
| TGTATAGCTGATGCAAAGGT+TGG | 0.507289 | 3.2:+89772404 | None:intergenic |
| CCCTGCAGTTTGGATATGCA+GGG | 0.509922 | 3.2:-89773151 | MS.gene42296:CDS |
| AAAAGGAAGGAGGAGAAGAA+AGG | 0.512453 | 3.2:+89773052 | None:intergenic |
| CAATAATATTGCGGTAAACT+GGG | 0.512889 | 3.2:+89773075 | None:intergenic |
| GCCGGATACTTCTTAAGGAC+AGG | 0.515533 | 3.2:+89771972 | None:intergenic |
| CTGGGATTGGGAGATGCAAA+AGG | 0.517390 | 3.2:-89772071 | MS.gene42296:CDS |
| GAGAAGAGTTCTATTTGGGA+GGG | 0.519169 | 3.2:-89770407 | MS.gene42296:intron |
| ACACAGGATTACAGCCAACC+AGG | 0.519218 | 3.2:-89772459 | MS.gene42296:intron |
| GAAGTGACAGAGAGGCGAGC+CGG | 0.526891 | 3.2:+89771954 | None:intergenic |
| CTGATTATGTTACTATGCTC+CGG | 0.528035 | 3.2:+89769606 | None:intergenic |
| GGAGAAGAGTTCTATTTGGG+AGG | 0.530894 | 3.2:-89770408 | MS.gene42296:CDS |
| TGGAGCAGTGTTGATCATTG+TGG | 0.532059 | 3.2:-89769703 | MS.gene42296:CDS |
| AGAAAGTTGAAAGTAATAGC+TGG | 0.533149 | 3.2:+89772868 | None:intergenic |
| ACCTCTTCTCCCTTCATCAA+CGG | 0.543925 | 3.2:-89769547 | MS.gene42296:CDS |
| AATGATATTGCAGGGAGTAG+TGG | 0.547741 | 3.2:-89770550 | MS.gene42296:intron |
| CTAAGAAGTAGGCAAAAGGA+AGG | 0.557992 | 3.2:+89773039 | None:intergenic |
| GTGGATCTTCGGGGAGAATG+TGG | 0.560514 | 3.2:-89773217 | MS.gene42296:CDS |
| GGAACTGGACTGTATATTGT+TGG | 0.563287 | 3.2:+89772152 | None:intergenic |
| TTCTCATGGCAGTCATACTC+AGG | 0.563325 | 3.2:-89772358 | MS.gene42296:intron |
| AGAACTCTTCTCCTAAAGCA+AGG | 0.563349 | 3.2:+89770418 | None:intergenic |
| TCCAAACTGCAGGGCCAACA+TGG | 0.564674 | 3.2:+89773160 | None:intergenic |
| GATACACCGCAACGAAAACT+GGG | 0.571780 | 3.2:+89770478 | None:intergenic |
| ACCAGCCATTACATTTCTCA+TGG | 0.574113 | 3.2:-89772372 | MS.gene42296:CDS |
| GGCAGCAATCACTTCCACTC+CGG | 0.576279 | 3.2:-89769625 | MS.gene42296:CDS |
| ACGAAGAAAAGAAATTTGCA+AGG | 0.577476 | 3.2:-89769653 | MS.gene42296:CDS |
| GTGCGGTTGAGCAGAAAGGA+TGG | 0.579539 | 3.2:-89772242 | MS.gene42296:CDS |
| TCCGTTGATGAAGGGAGAAG+AGG | 0.579930 | 3.2:+89769546 | None:intergenic |
| CACAGGATTACAGCCAACCA+GGG | 0.585971 | 3.2:-89772458 | MS.gene42296:intron |
| CAGAAAGGATGGAATAGGAA+AGG | 0.587068 | 3.2:-89772231 | MS.gene42296:CDS |
| ACCTGTTCAAACTCTTGTTG+TGG | 0.587524 | 3.2:-89770454 | MS.gene42296:CDS |
| CTATAAGGTACAAACATCCA+AGG | 0.588308 | 3.2:+89772036 | None:intergenic |
| TCAATCTCAATCTCATCACT+GGG | 0.594573 | 3.2:-89772089 | MS.gene42296:CDS |
| AAAGGTGCGGTTGAGCAGAA+AGG | 0.597199 | 3.2:-89772246 | MS.gene42296:CDS |
| GACTGCCATGAGAAATGTAA+TGG | 0.598733 | 3.2:+89772367 | None:intergenic |
| GTGCAGCTCTTGAGACGACA+TGG | 0.599138 | 3.2:+89773126 | None:intergenic |
| GAACTCTTCTCCTAAAGCAA+GGG | 0.601075 | 3.2:+89770419 | None:intergenic |
| AGCCAAGCAAGTAGAAACCC+TGG | 0.603068 | 3.2:+89772441 | None:intergenic |
| CGAAGAAAAGAAATTTGCAA+GGG | 0.607837 | 3.2:-89769652 | MS.gene42296:CDS |
| TTAATGCTGCTGTTTAGAGG+TGG | 0.608851 | 3.2:+89772131 | None:intergenic |
| GATGGAATAGGAAAGGTGGC+AGG | 0.613834 | 3.2:-89772224 | MS.gene42296:CDS |
| ATTCTGTATAGCTGATGCAA+AGG | 0.622901 | 3.2:+89772400 | None:intergenic |
| GCCATGAGAAATGTAATGGC+TGG | 0.624808 | 3.2:+89772371 | None:intergenic |
| ACAGTAATGGCTGATTCAGG+TGG | 0.627179 | 3.2:-89773236 | None:intergenic |
| GAAGAAAGGCAATAATATTG+CGG | 0.628252 | 3.2:+89773066 | None:intergenic |
| ATTTCAGAATAGAAAAGGTG+CGG | 0.629935 | 3.2:-89772259 | MS.gene42296:intron |
| GGGTTATACCTAGTGTTGTG+GGG | 0.633805 | 3.2:-89769681 | MS.gene42296:CDS |
| AGAAGTAGGCAAAAGGAAGG+AGG | 0.634893 | 3.2:+89773042 | None:intergenic |
| CTGATTCAGGTGGATCTTCG+GGG | 0.648140 | 3.2:-89773226 | MS.gene42296:CDS |
| AGAACGGTTTCAGCTGCATG+CGG | 0.650802 | 3.2:-89773183 | MS.gene42296:CDS |
| TCAAGAGCTGCACTTAACAT+GGG | 0.652569 | 3.2:-89773116 | MS.gene42296:CDS |
| TATAAGGTACAAACATCCAA+GGG | 0.653632 | 3.2:+89772037 | None:intergenic |
| CCCTGCATATCCAAACTGCA+GGG | 0.660971 | 3.2:+89773151 | None:intergenic |
| AAGCAAGTAGAAACCCTGGT+TGG | 0.660998 | 3.2:+89772445 | None:intergenic |
| AAAGGATGGAATAGGAAAGG+TGG | 0.662240 | 3.2:-89772228 | MS.gene42296:CDS |
| TATGTTACTATGCTCCGGAG+TGG | 0.664769 | 3.2:+89769611 | None:intergenic |
| ATATGGTGCATTGATAGAGG+AGG | 0.677684 | 3.2:-89770501 | MS.gene42296:CDS |
| GAGCAGTGTTGATCATTGTG+GGG | 0.677789 | 3.2:-89769701 | MS.gene42296:CDS |
| CTAAACAGCAGCATTAATGG+TGG | 0.679207 | 3.2:-89772125 | MS.gene42296:CDS |
| TCAGTGATTACACTATACAA+AGG | 0.680062 | 3.2:-89772176 | MS.gene42296:CDS |
| TGTGGTGCTCCATACCAGAA+CGG | 0.693501 | 3.2:-89773199 | MS.gene42296:CDS |
| ATGTATAAGAAGTGACAGAG+AGG | 0.704299 | 3.2:+89771946 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAATGAATGAATTAA+GGG | + | chr3.2:89770450-89770469 | None:intergenic | 10.0% |
| !! | ACAAAATAATAATATATTTC+CGG | + | chr3.2:89771068-89771087 | None:intergenic | 10.0% |
| !! | ATTTATTAAAACCAAATATA+GGG | + | chr3.2:89771164-89771183 | None:intergenic | 10.0% |
| !! | GAATCTTAAATAAAATTATA+CGG | + | chr3.2:89771564-89771583 | None:intergenic | 10.0% |
| !! | TAAATTAAATGAATGAATTA+AGG | + | chr3.2:89770451-89770470 | None:intergenic | 10.0% |
| !! | TATAATCTAAATTTATATTG+TGG | - | chr3.2:89770090-89770109 | MS.gene42296:intron | 10.0% |
| !! | TATTTATTAAAACCAAATAT+AGG | + | chr3.2:89771165-89771184 | None:intergenic | 10.0% |
| !!! | AGTAGATATAATATTTTTTA+AGG | - | chr3.2:89771405-89771424 | MS.gene42296:intron | 10.0% |
| !!! | GTAGATATAATATTTTTTAA+GGG | - | chr3.2:89771406-89771425 | MS.gene42296:intron | 10.0% |
| !!! | TAGATATAATATTTTTTAAG+GGG | - | chr3.2:89771407-89771426 | MS.gene42296:intron | 10.0% |
| !!! | TTGGTTTTAATAAATATTAT+TGG | - | chr3.2:89771169-89771188 | MS.gene42296:intron | 10.0% |
| !! | AAATTAACATACATAAAAGT+TGG | - | chr3.2:89769793-89769812 | MS.gene42296:intron | 15.0% |
| !! | AATTTCATTAAAACACTATT+GGG | - | chr3.2:89772643-89772662 | MS.gene42296:intron | 15.0% |
| !! | ATTAAAAATAAAGCAAAAAG+AGG | + | chr3.2:89772421-89772440 | None:intergenic | 15.0% |
| !! | ATTCATAAAAGTTATTTACA+AGG | + | chr3.2:89773012-89773031 | None:intergenic | 15.0% |
| !! | ATTTATACTATGTTAATTAG+TGG | + | chr3.2:89769777-89769796 | None:intergenic | 15.0% |
| !! | GTAAAAAAAAAAAAAAACGA+TGG | - | chr3.2:89769993-89770012 | MS.gene42296:intron | 15.0% |
| !! | TATTACAAAAGAAAAAGAAA+TGG | - | chr3.2:89772983-89773002 | MS.gene42296:intron | 15.0% |
| !! | TATTATATTGTTAGAAAATG+TGG | - | chr3.2:89770061-89770080 | MS.gene42296:intron | 15.0% |
| !! | TTAAAAATAAAGCAAAAAGA+GGG | + | chr3.2:89772420-89772439 | None:intergenic | 15.0% |
| !! | TTATAATAAAATAAAATGCG+TGG | + | chr3.2:89772559-89772578 | None:intergenic | 15.0% |
| !! | TTTAAATCATTTATATACTG+CGG | - | chr3.2:89770139-89770158 | MS.gene42296:intron | 15.0% |
| !!! | ATAATGTTCTAAAGATATAA+TGG | - | chr3.2:89772075-89772094 | MS.gene42296:CDS | 15.0% |
| !!! | TTATATTGATTTTATCTTAG+AGG | - | chr3.2:89771870-89771889 | MS.gene42296:CDS | 15.0% |
| !!! | TTGTAAATAACTTTTATGAA+TGG | - | chr3.2:89773011-89773030 | MS.gene42296:intron | 15.0% |
| !!! | TTTTCTTTTGTAATAAAGAT+AGG | + | chr3.2:89772978-89772997 | None:intergenic | 15.0% |
| !!! | TTTTTTTACATAATGATGTT+TGG | - | chr3.2:89771772-89771791 | MS.gene42296:intron | 15.0% |
| !! | AACTTATGTTATGTATTGTA+CGG | + | chr3.2:89769821-89769840 | None:intergenic | 20.0% |
| !! | AATGTATATTAGTAGTACAT+AGG | + | chr3.2:89772179-89772198 | None:intergenic | 20.0% |
| !! | AATTTACATCTTAATAAAGC+TGG | - | chr3.2:89771904-89771923 | MS.gene42296:CDS | 20.0% |
| !! | ATACAATTTCAGAATAGAAA+AGG | - | chr3.2:89770502-89770521 | MS.gene42296:CDS | 20.0% |
| !! | ATATATAAAGACAACTCTAA+CGG | + | chr3.2:89771213-89771232 | None:intergenic | 20.0% |
| !! | ATCTAAAAGTCTTAAAACAT+TGG | - | chr3.2:89771265-89771284 | MS.gene42296:intron | 20.0% |
| !! | CATTGTTAATACTAAATATG+CGG | + | chr3.2:89771377-89771396 | None:intergenic | 20.0% |
| !! | GAAAATGAATGAAAAAGATA+AGG | + | chr3.2:89772398-89772417 | None:intergenic | 20.0% |
| !! | GAATAAAAAACCTAATGATA+TGG | - | chr3.2:89771535-89771554 | MS.gene42296:intron | 20.0% |
| !! | GAATTTCATTAAAACACTAT+TGG | - | chr3.2:89772642-89772661 | MS.gene42296:intron | 20.0% |
| !! | GATGAAATTTCATATAATCT+TGG | + | chr3.2:89771508-89771527 | None:intergenic | 20.0% |
| !! | TAATATACAATGATATTGCA+GGG | - | chr3.2:89772208-89772227 | MS.gene42296:CDS | 20.0% |
| !! | TATGTATGTGATGAAATTAA+AGG | + | chr3.2:89772464-89772483 | None:intergenic | 20.0% |
| !! | TCTAAAAGTCTTAAAACATT+GGG | - | chr3.2:89771266-89771285 | MS.gene42296:intron | 20.0% |
| !! | TTAATATACAATGATATTGC+AGG | - | chr3.2:89772207-89772226 | MS.gene42296:CDS | 20.0% |
| !! | TTAGAGTTGTCTTTATATAT+TGG | - | chr3.2:89771213-89771232 | MS.gene42296:intron | 20.0% |
| !!! | TCTTTTAAGTATAACAAAAC+AGG | + | chr3.2:89770205-89770224 | None:intergenic | 20.0% |
| !!! | TTTTACTTTAAGTAATGAGT+GGG | + | chr3.2:89769970-89769989 | None:intergenic | 20.0% |
| ! | AAAAAAAACGATGGAAATCA+TGG | - | chr3.2:89770002-89770021 | MS.gene42296:intron | 25.0% |
| ! | AAATGAAATTTGCATTACAC+AGG | - | chr3.2:89770291-89770310 | MS.gene42296:intron | 25.0% |
| ! | AAGATGTAAATTCTGATGTA+TGG | + | chr3.2:89771896-89771915 | None:intergenic | 25.0% |
| ! | AATTAGTGGAGGTAATATAT+AGG | + | chr3.2:89769763-89769782 | None:intergenic | 25.0% |
| ! | ACTTCTTATACATGTTTCTT+TGG | - | chr3.2:89770830-89770849 | MS.gene42296:intron | 25.0% |
| ! | CTAAAAGTCTTAAAACATTG+GGG | - | chr3.2:89771267-89771286 | MS.gene42296:intron | 25.0% |
| ! | GTTGTAGCTTCATAAATATA+CGG | + | chr3.2:89771630-89771649 | None:intergenic | 25.0% |
| ! | TATACTATGTTAATTAGTGG+AGG | + | chr3.2:89769774-89769793 | None:intergenic | 25.0% |
| ! | TATACTTTCAAAGTGACTTT+GGG | - | chr3.2:89771124-89771143 | MS.gene42296:intron | 25.0% |
| ! | TATATAAAGACAACTCTAAC+GGG | + | chr3.2:89771212-89771231 | None:intergenic | 25.0% |
| ! | TCAAAGCAATAATGAGAAAT+TGG | + | chr3.2:89770862-89770881 | None:intergenic | 25.0% |
| ! | TTTACTTTAAGTAATGAGTG+GGG | + | chr3.2:89769969-89769988 | None:intergenic | 25.0% |
| !! | AGTTTTTACTATTTTGTACG+CGG | - | chr3.2:89770928-89770947 | MS.gene42296:intron | 25.0% |
| !! | CTATTATTACAAAGCACTAT+TGG | - | chr3.2:89772719-89772738 | MS.gene42296:intron | 25.0% |
| !! | CTTTTACTTTAAGTAATGAG+TGG | + | chr3.2:89769971-89769990 | None:intergenic | 25.0% |
| !!! | ATAGTTCTACTTTTTTGTTC+AGG | - | chr3.2:89769866-89769885 | MS.gene42296:intron | 25.0% |
| !!! | ATGGTTTTAAATTACAGTTG+TGG | - | chr3.2:89770021-89770040 | MS.gene42296:intron | 25.0% |
| !!! | CACTATTTTTATCCAATATG+TGG | - | chr3.2:89771311-89771330 | MS.gene42296:intron | 25.0% |
| !!! | CACTTTGTAGTCTTTTTTTT+TGG | - | chr3.2:89771932-89771951 | MS.gene42296:CDS | 25.0% |
| !!! | TGTTCTAAAGATATAATGGT+AGG | - | chr3.2:89772079-89772098 | MS.gene42296:CDS | 25.0% |
| !!! | TTCATTTGTCGTTTTCAAAA+TGG | + | chr3.2:89772625-89772644 | None:intergenic | 25.0% |
| !!! | TTTAAACTTTTTTGACCCTA+TGG | + | chr3.2:89772924-89772943 | None:intergenic | 25.0% |
| AAAAAAGACTACAAAGTGCA+TGG | + | chr3.2:89771930-89771949 | None:intergenic | 30.0% | |
| AATAGTGCTAAAAACATGTG+AGG | + | chr3.2:89771298-89771317 | None:intergenic | 30.0% | |
| ACGAAGAAAAGAAATTTGCA+AGG | - | chr3.2:89773113-89773132 | MS.gene42296:CDS | 30.0% | |
| AGAAAGTTGAAAGTAATAGC+TGG | + | chr3.2:89769901-89769920 | None:intergenic | 30.0% | |
| ATACTTTCAAAGTGACTTTG+GGG | - | chr3.2:89771125-89771144 | MS.gene42296:intron | 30.0% | |
| ATATAAAGACAACTCTAACG+GGG | + | chr3.2:89771211-89771230 | None:intergenic | 30.0% | |
| ATGAAAAAGATAAGGTAGCT+AGG | + | chr3.2:89772390-89772409 | None:intergenic | 30.0% | |
| ATGACAAACAATGTCCTATA+AGG | + | chr3.2:89770748-89770767 | None:intergenic | 30.0% | |
| ATTTCAGAATAGAAAAGGTG+CGG | - | chr3.2:89770507-89770526 | MS.gene42296:CDS | 30.0% | |
| CAATAATATTGCGGTAAACT+GGG | + | chr3.2:89769694-89769713 | None:intergenic | 30.0% | |
| CATTAAAACACTATTGGGTT+GGG | - | chr3.2:89772648-89772667 | MS.gene42296:intron | 30.0% | |
| CGAAGAAAAGAAATTTGCAA+GGG | - | chr3.2:89773114-89773133 | MS.gene42296:CDS | 30.0% | |
| GAAGAAAGGCAATAATATTG+CGG | + | chr3.2:89769703-89769722 | None:intergenic | 30.0% | |
| GTATACTTTCAAAGTGACTT+TGG | - | chr3.2:89771123-89771142 | MS.gene42296:intron | 30.0% | |
| TAATGATTCCATGTTCCATA+GGG | - | chr3.2:89772906-89772925 | MS.gene42296:intron | 30.0% | |
| TAGAAAATCAAACATGTGTC+CGG | - | chr3.2:89771046-89771065 | MS.gene42296:intron | 30.0% | |
| TATAAGGTACAAACATCCAA+GGG | + | chr3.2:89770732-89770751 | None:intergenic | 30.0% | |
| TCAGTGATTACACTATACAA+AGG | - | chr3.2:89770590-89770609 | MS.gene42296:intron | 30.0% | |
| TCATTAAAACACTATTGGGT+TGG | - | chr3.2:89772647-89772666 | MS.gene42296:intron | 30.0% | |
| TTAATGATTCCATGTTCCAT+AGG | - | chr3.2:89772905-89772924 | MS.gene42296:intron | 30.0% | |
| TTAGGAGAAGAGTTCTATTT+GGG | - | chr3.2:89772355-89772374 | MS.gene42296:intron | 30.0% | |
| TTATAGGACATTGTTTGTCA+TGG | - | chr3.2:89770747-89770766 | MS.gene42296:intron | 30.0% | |
| TTTAGGAGAAGAGTTCTATT+TGG | - | chr3.2:89772354-89772373 | MS.gene42296:intron | 30.0% | |
| ! | AAGTTAATTTTGAGCTAAGC+GGG | + | chr3.2:89771706-89771725 | None:intergenic | 30.0% |
| ! | ACTGACTCAACTAAGAAAAA+AGG | - | chr3.2:89772692-89772711 | MS.gene42296:intron | 30.0% |
| ! | GAAGTTAATTTTGAGCTAAG+CGG | + | chr3.2:89771707-89771726 | None:intergenic | 30.0% |
| ! | TCACTTTGAAAGTATACTTC+CGG | + | chr3.2:89771120-89771139 | None:intergenic | 30.0% |
| ! | TGTAGTCTTGATAACTTTCA+TGG | - | chr3.2:89772532-89772551 | MS.gene42296:intron | 30.0% |
| ! | TTTGCAATTTGAAACCATGA+TGG | - | chr3.2:89770163-89770182 | MS.gene42296:intron | 30.0% |
| !! | AAACATTTTCCGTTGATGAA+GGG | + | chr3.2:89773231-89773250 | None:intergenic | 30.0% |
| !! | CTTTATATATTGGCCTTTAG+TGG | - | chr3.2:89771223-89771242 | MS.gene42296:intron | 30.0% |
| !! | GACTAACTTTTCTAAGAAGT+AGG | + | chr3.2:89769741-89769760 | None:intergenic | 30.0% |
| !! | GTTTTAAATTACAGTTGTGG+TGG | - | chr3.2:89770024-89770043 | MS.gene42296:intron | 30.0% |
| !! | TTTTCTAAGAAGTAGGCAAA+AGG | + | chr3.2:89769734-89769753 | None:intergenic | 30.0% |
| !!! | CACTGTTTTTATCTTCTTTC+CGG | - | chr3.2:89771098-89771117 | MS.gene42296:intron | 30.0% |
| !!! | TTCTACTTTTTTGTTCAGGA+AGG | - | chr3.2:89769870-89769889 | MS.gene42296:intron | 30.0% |
| ATCCTGTAACATCACAAATG+TGG | + | chr3.2:89773040-89773059 | None:intergenic | 35.0% | |
| ATGTATAAGAAGTGACAGAG+AGG | + | chr3.2:89770823-89770842 | None:intergenic | 35.0% | |
| ATTCTGTATAGCTGATGCAA+AGG | + | chr3.2:89770369-89770388 | None:intergenic | 35.0% | |
| CAATCCTAATGTTTCCATCA+TGG | + | chr3.2:89770180-89770199 | None:intergenic | 35.0% | |
| CTATAAGGTACAAACATCCA+AGG | + | chr3.2:89770733-89770752 | None:intergenic | 35.0% | |
| CTGATTATGTTACTATGCTC+CGG | + | chr3.2:89773163-89773182 | None:intergenic | 35.0% | |
| CTTGGATGTTTGTACCTTAT+AGG | - | chr3.2:89770731-89770750 | MS.gene42296:intron | 35.0% | |
| GAGATGCAAAAGGAAAAAAC+TGG | - | chr3.2:89770705-89770724 | MS.gene42296:intron | 35.0% | |
| GCAATAATATTGCGGTAAAC+TGG | + | chr3.2:89769695-89769714 | None:intergenic | 35.0% | |
| TATACGGTGACCATATCATT+AGG | + | chr3.2:89771548-89771567 | None:intergenic | 35.0% | |
| TATAGGAAGCTCCCTATATT+TGG | - | chr3.2:89771150-89771169 | MS.gene42296:intron | 35.0% | |
| TATATAGCTTCATGACAACG+TGG | + | chr3.2:89770240-89770259 | None:intergenic | 35.0% | |
| TCAATCTCAATCTCATCACT+GGG | - | chr3.2:89770677-89770696 | MS.gene42296:intron | 35.0% | |
| TCATAAATATACGGTGACCA+AGG | + | chr3.2:89771621-89771640 | None:intergenic | 35.0% | |
| TGAAAACGAAGTCCACATAT+TGG | + | chr3.2:89771326-89771345 | None:intergenic | 35.0% | |
| TTGTGATGTTACAGGATCAT+TGG | - | chr3.2:89773043-89773062 | MS.gene42296:CDS | 35.0% | |
| ! | AAAGTGACTTTGGGGAATAT+AGG | - | chr3.2:89771133-89771152 | MS.gene42296:intron | 35.0% |
| ! | AACTCTTGTTGTGGCTATTA+TGG | - | chr3.2:89772321-89772340 | MS.gene42296:intron | 35.0% |
| ! | AGGTTGAGAAAGTGATGTTT+TGG | + | chr3.2:89773203-89773222 | None:intergenic | 35.0% |
| ! | GAAACCATGATGGAAACATT+AGG | - | chr3.2:89770173-89770192 | MS.gene42296:intron | 35.0% |
| ! | TCTCTACACCAAAAAGCATA+AGG | + | chr3.2:89771735-89771754 | None:intergenic | 35.0% |
| !! | CAAACATTTTCCGTTGATGA+AGG | + | chr3.2:89773232-89773251 | None:intergenic | 35.0% |
| !!! | AAAGTGATGTTTTGGCATGA+TGG | + | chr3.2:89773195-89773214 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGCATCAAGTCCT+TGG | - | chr3.2:89771601-89771620 | MS.gene42296:intron | 35.0% |
| !!! | TTTTTTGACCCTATGGAACA+TGG | + | chr3.2:89772917-89772936 | None:intergenic | 35.0% |
| AAAAAATTGCATACCCGACG+AGG | + | chr3.2:89769945-89769964 | None:intergenic | 40.0% | |
| AAAAATTGCATACCCGACGA+GGG | + | chr3.2:89769944-89769963 | None:intergenic | 40.0% | |
| AAAAGGAAGGAGGAGAAGAA+AGG | + | chr3.2:89769717-89769736 | None:intergenic | 40.0% | |
| AAAGAAATTTGCAAGGGAGC+TGG | - | chr3.2:89773120-89773139 | MS.gene42296:CDS | 40.0% | |
| AAAGGAAAAAACTGGACCCT+TGG | - | chr3.2:89770713-89770732 | MS.gene42296:intron | 40.0% | |
| AAAGGATGGAATAGGAAAGG+TGG | - | chr3.2:89770538-89770557 | MS.gene42296:CDS | 40.0% | |
| AATGATATTGCAGGGAGTAG+TGG | - | chr3.2:89772216-89772235 | MS.gene42296:CDS | 40.0% | |
| AATGGCGATCATTCATCTGT+TGG | + | chr3.2:89772607-89772626 | None:intergenic | 40.0% | |
| ACCAGCCATTACATTTCTCA+TGG | - | chr3.2:89770394-89770413 | MS.gene42296:intron | 40.0% | |
| ACCTGTTCAAACTCTTGTTG+TGG | - | chr3.2:89772312-89772331 | MS.gene42296:intron | 40.0% | |
| AGAACTCTTCTCCTAAAGCA+AGG | + | chr3.2:89772351-89772370 | None:intergenic | 40.0% | |
| AGTTCTCACCTAAGTCCTAA+AGG | + | chr3.2:89772675-89772694 | None:intergenic | 40.0% | |
| ATTATGGCTTCCCTTGCTTT+AGG | - | chr3.2:89772337-89772356 | MS.gene42296:intron | 40.0% | |
| ATTGTTTGTCATGGTCTGGT+TGG | - | chr3.2:89770756-89770775 | MS.gene42296:intron | 40.0% | |
| CAGAAAGGATGGAATAGGAA+AGG | - | chr3.2:89770535-89770554 | MS.gene42296:CDS | 40.0% | |
| CCTCTAAACAGCAGCATTAA+TGG | - | chr3.2:89770638-89770657 | MS.gene42296:intron | 40.0% | |
| CCTTTAGTGGTCTAAACTTG+GGG | - | chr3.2:89771236-89771255 | MS.gene42296:intron | 40.0% | |
| CGGAGCATAGTAACATAATC+AGG | - | chr3.2:89773161-89773180 | MS.gene42296:CDS | 40.0% | |
| CTAAACAGCAGCATTAATGG+TGG | - | chr3.2:89770641-89770660 | MS.gene42296:intron | 40.0% | |
| CTAAGAAGTAGGCAAAAGGA+AGG | + | chr3.2:89769730-89769749 | None:intergenic | 40.0% | |
| CTCAATCTCAATCTCATCAC+TGG | - | chr3.2:89770676-89770695 | MS.gene42296:intron | 40.0% | |
| GAACTCTTCTCCTAAAGCAA+GGG | + | chr3.2:89772350-89772369 | None:intergenic | 40.0% | |
| GAAGCTACAACTTGTAGCAT+CGG | - | chr3.2:89771639-89771658 | MS.gene42296:intron | 40.0% | |
| GACTGCCATGAGAAATGTAA+TGG | + | chr3.2:89770402-89770421 | None:intergenic | 40.0% | |
| GAGAAGAGTTCTATTTGGGA+GGG | - | chr3.2:89772359-89772378 | MS.gene42296:CDS | 40.0% | |
| GCCTTTAGTGGTCTAAACTT+GGG | - | chr3.2:89771235-89771254 | MS.gene42296:intron | 40.0% | |
| GGAACTGGACTGTATATTGT+TGG | + | chr3.2:89770617-89770636 | None:intergenic | 40.0% | |
| TCAAGAGCTGCACTTAACAT+GGG | - | chr3.2:89769650-89769669 | MS.gene42296:CDS | 40.0% | |
| TCAATCTCATCACTGGGATT+GGG | - | chr3.2:89770683-89770702 | MS.gene42296:intron | 40.0% | |
| TGCCACATTTGTGATGTTAC+AGG | - | chr3.2:89773035-89773054 | MS.gene42296:CDS | 40.0% | |
| TGTATAGCTGATGCAAAGGT+TGG | + | chr3.2:89770365-89770384 | None:intergenic | 40.0% | |
| TTGAGCAGAAAGGATGGAAT+AGG | - | chr3.2:89770530-89770549 | MS.gene42296:CDS | 40.0% | |
| TTGCATTCGCTGTACAGATA+TGG | - | chr3.2:89772248-89772267 | MS.gene42296:CDS | 40.0% | |
| ! | ATATGGTGCATTGATAGAGG+AGG | - | chr3.2:89772265-89772284 | MS.gene42296:intron | 40.0% |
| ! | CAGATATGGTGCATTGATAG+AGG | - | chr3.2:89772262-89772281 | MS.gene42296:intron | 40.0% |
| ! | CCATTAATGCTGCTGTTTAG+AGG | + | chr3.2:89770641-89770660 | None:intergenic | 40.0% |
| ! | TTAATGCTGCTGTTTAGAGG+TGG | + | chr3.2:89770638-89770657 | None:intergenic | 40.0% |
| !! | ACCTGTCCTTAAGAAGTATC+CGG | - | chr3.2:89770793-89770812 | MS.gene42296:intron | 40.0% |
| !! | CAGGCTTGGATTTTTCAATC+TGG | - | chr3.2:89770899-89770918 | MS.gene42296:intron | 40.0% |
| !! | GCTTGGATTTTTCAATCTGG+TGG | - | chr3.2:89770902-89770921 | MS.gene42296:intron | 40.0% |
| !! | GGAACATTGTTTTGTGTTGC+AGG | - | chr3.2:89770563-89770582 | MS.gene42296:intron | 40.0% |
| !!! | CTTTTTTGTTCAGGAAGGAG+AGG | - | chr3.2:89769875-89769894 | MS.gene42296:intron | 40.0% |
| AACCAGGGTTTCTACTTGCT+TGG | - | chr3.2:89770323-89770342 | MS.gene42296:intron | 45.0% | |
| AAGCAAGTAGAAACCCTGGT+TGG | + | chr3.2:89770324-89770343 | None:intergenic | 45.0% | |
| AAGCCTGAGCATCTCTTTCA+AGG | + | chr3.2:89770886-89770905 | None:intergenic | 45.0% | |
| ACCTCTTCTCCCTTCATCAA+CGG | - | chr3.2:89773219-89773238 | MS.gene42296:CDS | 45.0% | |
| AGAAGTAGGCAAAAGGAAGG+AGG | + | chr3.2:89769727-89769746 | None:intergenic | 45.0% | |
| CCCCAAGTTTAGACCACTAA+AGG | + | chr3.2:89771239-89771258 | None:intergenic | 45.0% | |
| CTCAAGAGCTGCACTTAACA+TGG | - | chr3.2:89769649-89769668 | MS.gene42296:CDS | 45.0% | |
| CTCAATCTCATCACTGGGAT+TGG | - | chr3.2:89770682-89770701 | MS.gene42296:intron | 45.0% | |
| GATACACCGCAACGAAAACT+GGG | + | chr3.2:89772291-89772310 | None:intergenic | 45.0% | |
| GATCCTTGAAAGAGATGCTC+AGG | - | chr3.2:89770880-89770899 | MS.gene42296:intron | 45.0% | |
| GCCACAACAAGAGTTTGAAC+AGG | + | chr3.2:89772316-89772335 | None:intergenic | 45.0% | |
| GCCATGAGAAATGTAATGGC+TGG | + | chr3.2:89770398-89770417 | None:intergenic | 45.0% | |
| GGACATTGTTTGTCATGGTC+TGG | - | chr3.2:89770752-89770771 | MS.gene42296:intron | 45.0% | |
| GGAGAAGAGTTCTATTTGGG+AGG | - | chr3.2:89772358-89772377 | MS.gene42296:intron | 45.0% | |
| GGCCTTTAGTGGTCTAAACT+TGG | - | chr3.2:89771234-89771253 | MS.gene42296:intron | 45.0% | |
| GGGGTTATACCTAGTGTTGT+GGG | - | chr3.2:89773084-89773103 | MS.gene42296:CDS | 45.0% | |
| GGGTTATACCTAGTGTTGTG+GGG | - | chr3.2:89773085-89773104 | MS.gene42296:CDS | 45.0% | |
| TATGTTACTATGCTCCGGAG+TGG | + | chr3.2:89773158-89773177 | None:intergenic | 45.0% | |
| TGATACACCGCAACGAAAAC+TGG | + | chr3.2:89772292-89772311 | None:intergenic | 45.0% | |
| TGGGGTTATACCTAGTGTTG+TGG | - | chr3.2:89773083-89773102 | MS.gene42296:CDS | 45.0% | |
| TTCTCATGGCAGTCATACTC+AGG | - | chr3.2:89770408-89770427 | MS.gene42296:CDS | 45.0% | |
| TTGAAAGAGATGCTCAGGCT+TGG | - | chr3.2:89770885-89770904 | MS.gene42296:intron | 45.0% | |
| ! | CGTTTTTACCCCACAACACT+AGG | + | chr3.2:89773096-89773115 | None:intergenic | 45.0% |
| ! | TTCGCTCGCCTTATGCTTTT+TGG | - | chr3.2:89771724-89771743 | MS.gene42296:intron | 45.0% |
| ! | TTCTTTTGTCTTGCCCTCGT+CGG | - | chr3.2:89769928-89769947 | MS.gene42296:intron | 45.0% |
| ! | TTTTGAGCTAAGCGGGTGTT+TGG | + | chr3.2:89771699-89771718 | None:intergenic | 45.0% |
| !! | ACTATTGGGTTGGGACCTTT+AGG | - | chr3.2:89772657-89772676 | MS.gene42296:intron | 45.0% |
| !! | GAGCAGTGTTGATCATTGTG+GGG | - | chr3.2:89773065-89773084 | MS.gene42296:CDS | 45.0% |
| !! | GGAGCAGTGTTGATCATTGT+GGG | - | chr3.2:89773064-89773083 | MS.gene42296:CDS | 45.0% |
| !! | TGGAGCAGTGTTGATCATTG+TGG | - | chr3.2:89773063-89773082 | MS.gene42296:CDS | 45.0% |
| !!! | TGTTTTGGCATGATGGCTTG+AGG | + | chr3.2:89773188-89773207 | None:intergenic | 45.0% |
| !! | CTATATATATATAATTAATA+TGG | - | chr3.2:89770253-89770272 | MS.gene42296:intron | 5.0% |
| !!! | AAATATTATATCTATTTTTT+TGG | + | chr3.2:89771454-89771473 | None:intergenic | 5.0% |
| ACACAGGATTACAGCCAACC+AGG | - | chr3.2:89770307-89770326 | MS.gene42296:intron | 50.0% | |
| ACCCTGCATATCCAAACTGC+AGG | + | chr3.2:89769619-89769638 | None:intergenic | 50.0% | |
| AGAACGGTTTCAGCTGCATG+CGG | - | chr3.2:89769583-89769602 | MS.gene42296:CDS | 50.0% | |
| AGCCAAGCAAGTAGAAACCC+TGG | + | chr3.2:89770328-89770347 | None:intergenic | 50.0% | |
| CACAGGATTACAGCCAACCA+GGG | - | chr3.2:89770308-89770327 | MS.gene42296:intron | 50.0% | |
| CAGCTGAAACCGTTCTGGTA+TGG | + | chr3.2:89769579-89769598 | None:intergenic | 50.0% | |
| CCCTGCAGTTTGGATATGCA+GGG | - | chr3.2:89769615-89769634 | MS.gene42296:CDS | 50.0% | |
| CCCTGCATATCCAAACTGCA+GGG | + | chr3.2:89769618-89769637 | None:intergenic | 50.0% | |
| CTGATTCAGGTGGATCTTCG+GGG | - | chr3.2:89769540-89769559 | MS.gene42296:CDS | 50.0% | |
| CTGGGATTGGGAGATGCAAA+AGG | - | chr3.2:89770695-89770714 | MS.gene42296:intron | 50.0% | |
| GATGGAATAGGAAAGGTGGC+AGG | - | chr3.2:89770542-89770561 | MS.gene42296:intron | 50.0% | |
| GCCGGATACTTCTTAAGGAC+AGG | + | chr3.2:89770797-89770816 | None:intergenic | 50.0% | |
| GGGTTTCTACTTGCTTGGCT+TGG | - | chr3.2:89770328-89770347 | MS.gene42296:intron | 50.0% | |
| TGTGGTGCTCCATACCAGAA+CGG | - | chr3.2:89769567-89769586 | MS.gene42296:CDS | 50.0% | |
| TTTGTCATGGTCTGGTTGGC+TGG | - | chr3.2:89770760-89770779 | MS.gene42296:intron | 50.0% | |
| ! | AAAGGTGCGGTTGAGCAGAA+AGG | - | chr3.2:89770520-89770539 | MS.gene42296:CDS | 50.0% |
| ! | CTGCTGTTTAGAGGTGGAAC+TGG | + | chr3.2:89770632-89770651 | None:intergenic | 50.0% |
| ! | GCTGATTCAGGTGGATCTTC+GGG | - | chr3.2:89769539-89769558 | MS.gene42296:CDS | 50.0% |
| ! | GGCTGATTCAGGTGGATCTT+CGG | - | chr3.2:89769538-89769557 | MS.gene42296:CDS | 50.0% |
| ! | TCCGTTGATGAAGGGAGAAG+AGG | + | chr3.2:89773223-89773242 | None:intergenic | 50.0% |
| ! | TCTTTTGTCTTGCCCTCGTC+GGG | - | chr3.2:89769929-89769948 | MS.gene42296:intron | 50.0% |
| !! | GGTTGGGACCTTTAGGACTT+AGG | - | chr3.2:89772664-89772683 | MS.gene42296:intron | 50.0% |
| GCATGCAGCTGAAACCGTTC+TGG | + | chr3.2:89769584-89769603 | None:intergenic | 55.0% | |
| GCCCTGCAGTTTGGATATGC+AGG | - | chr3.2:89769614-89769633 | MS.gene42296:CDS | 55.0% | |
| GGCAGCAATCACTTCCACTC+CGG | - | chr3.2:89773141-89773160 | MS.gene42296:CDS | 55.0% | |
| GGCGAGCCGGATACTTCTTA+AGG | + | chr3.2:89770802-89770821 | None:intergenic | 55.0% | |
| GTGCAGCTCTTGAGACGACA+TGG | + | chr3.2:89769643-89769662 | None:intergenic | 55.0% | |
| GTGCGGTTGAGCAGAAAGGA+TGG | - | chr3.2:89770524-89770543 | MS.gene42296:CDS | 55.0% | |
| GTGGATCTTCGGGGAGAATG+TGG | - | chr3.2:89769549-89769568 | MS.gene42296:CDS | 55.0% | |
| TCCAAACTGCAGGGCCAACA+TGG | + | chr3.2:89769609-89769628 | None:intergenic | 55.0% | |
| TTGCAGGGAGTAGTGGCATC+AGG | - | chr3.2:89772223-89772242 | MS.gene42296:CDS | 55.0% | |
| ! | AGGAGGCCCAGTTTTCGTTG+CGG | - | chr3.2:89772282-89772301 | MS.gene42296:intron | 55.0% |
| GAAGTGACAGAGAGGCGAGC+CGG | + | chr3.2:89770815-89770834 | None:intergenic | 60.0% | |
| GCCATGTTGGCCCTGCAGTT+TGG | - | chr3.2:89769605-89769624 | MS.gene42296:CDS | 60.0% | |
| TCAGCTGCATGCGGCCATGT+TGG | - | chr3.2:89769592-89769611 | MS.gene42296:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 89769536 | 89773252 | 89769536 | ID=MS.gene42296 |
| chr3.2 | mRNA | 89769536 | 89773252 | 89769536 | ID=MS.gene42296.t1;Parent=MS.gene42296 |
| chr3.2 | exon | 89773035 | 89773252 | 89773035 | ID=MS.gene42296.t1.exon1;Parent=MS.gene42296.t1 |
| chr3.2 | CDS | 89773035 | 89773252 | 89773035 | ID=cds.MS.gene42296.t1;Parent=MS.gene42296.t1 |
| chr3.2 | exon | 89772838 | 89772900 | 89772838 | ID=MS.gene42296.t1.exon2;Parent=MS.gene42296.t1 |
| chr3.2 | CDS | 89772838 | 89772900 | 89772838 | ID=cds.MS.gene42296.t1;Parent=MS.gene42296.t1 |
| chr3.2 | exon | 89772359 | 89772475 | 89772359 | ID=MS.gene42296.t1.exon3;Parent=MS.gene42296.t1 |
| chr3.2 | CDS | 89772359 | 89772475 | 89772359 | ID=cds.MS.gene42296.t1;Parent=MS.gene42296.t1 |
| chr3.2 | exon | 89771839 | 89772274 | 89771839 | ID=MS.gene42296.t1.exon4;Parent=MS.gene42296.t1 |
| chr3.2 | CDS | 89771839 | 89772274 | 89771839 | ID=cds.MS.gene42296.t1;Parent=MS.gene42296.t1 |
| chr3.2 | exon | 89770408 | 89770559 | 89770408 | ID=MS.gene42296.t1.exon5;Parent=MS.gene42296.t1 |
| chr3.2 | CDS | 89770408 | 89770559 | 89770408 | ID=cds.MS.gene42296.t1;Parent=MS.gene42296.t1 |
| chr3.2 | exon | 89769536 | 89769731 | 89769536 | ID=MS.gene42296.t1.exon6;Parent=MS.gene42296.t1 |
| chr3.2 | CDS | 89769536 | 89769731 | 89769536 | ID=cds.MS.gene42296.t1;Parent=MS.gene42296.t1 |
| Gene Sequence |
| Protein sequence |
