AlfalfaGEDB | MS.gene056870

M. sativa cultivar XinJiangDaYe / MS.gene056870

KEGG: -
GO: GO:0003674 GO:0005488 GO:0030145 GO:0043167 GO:0043169 GO:0045735 GO:0046872 GO:0046914
PFAM: PF00190.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056870.t1	XP_013467999.1	97.8	227	4	1	1	226	1	227	2.20E-121	444.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056870.t1	Q9SR72	67.7	201	64	1	22	222	22	221	6.7e-82	305.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056870.t1	A0A072VK82	97.8	227	4	1	1	226	1	227	1.6e-121	444.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene056870	MS.gene064716	0.819077	1.40E-52	-1.69E-46
MS.gene056870	MS.gene064889	0.80059	1.34E-48	-1.69E-46
MS.gene056870	MS.gene065643	0.850557	1.57E-60	-1.69E-46
MS.gene056870	MS.gene068190	0.829324	5.49E-55	-1.69E-46
MS.gene056870	MS.gene07138	0.839131	1.90E-57	-1.69E-46
MS.gene056870	MS.gene071428	0.840145	1.04E-57	-1.69E-46
MS.gene056870	MS.gene07246	0.80555	1.26E-49	-1.69E-46
MS.gene056870	MS.gene07618	0.844717	6.36E-59	-1.69E-46
MS.gene056870	MS.gene07620	0.839495	1.53E-57	-1.69E-46
MS.gene056870	MS.gene07622	0.836873	7.25E-57	-1.69E-46
MS.gene056870	MS.gene08048	0.818261	2.15E-52	-1.69E-46
MS.gene056870	MS.gene08366	0.849037	4.18E-60	-1.69E-46
MS.gene056870	MS.gene09801	0.826574	2.52E-54	-1.69E-46
MS.gene056870	MS.gene20032	0.825375	4.85E-54	-1.69E-46
MS.gene056870	MS.gene20038	0.819511	1.12E-52	-1.69E-46
MS.gene056870	MS.gene20768	0.805401	1.36E-49	-1.69E-46
MS.gene056870	MS.gene22470	0.813445	2.55E-51	-1.69E-46
MS.gene056870	MS.gene24224	0.80338	3.58E-49	-1.69E-46
MS.gene056870	MS.gene26381	0.808944	2.41E-50	-1.69E-46
MS.gene056870	MS.gene26665	0.815595	8.53E-52	-1.69E-46
MS.gene056870	MS.gene27011	0.805576	1.25E-49	-1.69E-46
MS.gene056870	MS.gene27274	0.817423	3.32E-52	-1.69E-46
MS.gene056870	MS.gene29731	0.828243	1.00E-54	-1.69E-46
MS.gene056870	MS.gene31375	0.802012	6.87E-49	-1.69E-46
MS.gene056870	MS.gene33688	0.800484	1.41E-48	-1.69E-46
MS.gene056870	MS.gene33809	0.813578	2.38E-51	-1.69E-46
MS.gene056870	MS.gene34980	0.818338	2.07E-52	-1.69E-46
MS.gene056870	MS.gene42296	0.818048	2.40E-52	-1.69E-46
MS.gene056870	MS.gene47366	0.858018	1.10E-62	-1.69E-46
MS.gene056870	MS.gene49744	0.820171	7.90E-53	-1.69E-46
MS.gene056870	MS.gene59357	0.805148	1.54E-49	-1.69E-46
MS.gene056870	MS.gene68228	0.802243	6.15E-49	-1.69E-46
MS.gene056870	MS.gene69443	0.863274	2.80E-64	-1.69E-46
MS.gene056870	MS.gene70141	0.828408	9.14E-55	-1.69E-46
MS.gene056870	MS.gene75220	0.820522	6.56E-53	-1.69E-46
MS.gene056870	MS.gene77669	0.807157	5.80E-50	-1.69E-46
MS.gene056870	MS.gene79784	0.800663	1.30E-48	-1.69E-46
MS.gene056870	MS.gene80867	0.808114	3.63E-50	-1.69E-46
MS.gene056870	MS.gene81739	0.929487	6.48E-93	-1.69E-46
MS.gene056870	MS.gene92758	0.806948	6.42E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene056870	MS.gene07591	PPI
MS.gene056870	MS.gene037520	PPI
MS.gene056870	MS.gene50790	PPI
MS.gene056870	MS.gene004411	PPI
MS.gene056870	MS.gene002728	PPI
MS.gene056870	MS.gene50789	PPI
MS.gene056870	MS.gene50787	PPI
MS.gene89773	MS.gene056870	PPI
MS.gene056870	MS.gene89774	PPI
MS.gene056870	MS.gene70061	PPI
MS.gene056870	MS.gene89775	PPI
MS.gene056870	MS.gene037518	PPI
MS.gene056870	MS.gene037519	PPI
MS.gene056870	MS.gene70064	PPI
MS.gene056870	MS.gene047464	PPI
MS.gene056870	MS.gene037516	PPI
MS.gene056870	MS.gene70062	PPI
MS.gene056870	MS.gene96244	PPI
MS.gene056870	MS.gene74887	PPI
MS.gene056870	MS.gene005041	PPI
MS.gene056870	MS.gene50786	PPI
MS.gene056870	MS.gene89772	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056870.t1	MTR_1g060120	97.797	227	4	1	1	226	1	227	3.35e-164	452
MS.gene056870.t1	MTR_1g112200	55.665	203	80	1	20	222	17	209	1.27e-80	240
MS.gene056870.t1	MTR_1g085500	38.182	220	126	5	8	224	6	218	3.50e-49	160
MS.gene056870.t1	MTR_6g005330	40.271	221	120	6	5	220	2	215	1.33e-45	151
MS.gene056870.t1	MTR_2g030855	41.379	203	105	4	23	220	19	212	5.77e-45	149
MS.gene056870.t1	MTR_6g005360	39.545	220	123	5	5	220	2	215	4.00e-44	147
MS.gene056870.t1	MTR_2g031270	39.720	214	107	5	12	220	17	213	4.89e-44	147
MS.gene056870.t1	MTR_5g036570	40.500	200	109	4	25	220	26	219	7.21e-44	147
MS.gene056870.t1	MTR_1g023770	39.910	223	110	6	6	220	3	209	2.09e-43	145
MS.gene056870.t1	MTR_6g005310	40.476	210	114	5	16	220	12	215	2.45e-43	145
MS.gene056870.t1	MTR_6g005340	41.232	211	111	6	16	220	12	215	3.25e-43	145
MS.gene056870.t1	MTR_1g085140	38.350	206	118	4	22	224	20	219	4.18e-43	145
MS.gene056870.t1	MTR_4g017040	39.189	222	120	6	5	219	2	215	5.55e-43	144
MS.gene056870.t1	MTR_7g111240	39.109	202	114	4	25	223	19	214	2.04e-42	143
MS.gene056870.t1	MTR_7g111240	38.614	202	112	4	25	223	19	211	3.25e-42	142
MS.gene056870.t1	MTR_1g079490	37.838	222	121	5	11	220	1	217	3.27e-42	142
MS.gene056870.t1	MTR_4g017050	37.838	222	123	6	5	219	2	215	1.60e-41	141
MS.gene056870.t1	MTR_2g019250	38.288	222	122	6	5	219	2	215	1.73e-41	140
MS.gene056870.t1	MTR_5g046410	37.838	222	123	6	5	219	2	215	1.85e-41	140
MS.gene056870.t1	MTR_5g046430	37.838	222	123	6	5	219	2	215	1.85e-41	140
MS.gene056870.t1	MTR_4g017030	37.838	222	123	6	5	219	2	215	1.85e-41	140
MS.gene056870.t1	MTR_2g041550	36.842	209	125	2	13	220	4	206	2.86e-38	132
MS.gene056870.t1	MTR_8g007300	37.624	202	120	3	14	213	14	211	3.33e-38	132
MS.gene056870.t1	MTR_8g020610	38.220	191	105	5	30	217	20	200	8.80e-38	130
MS.gene056870.t1	MTR_6g005350	37.736	212	122	5	14	220	8	214	1.68e-37	130
MS.gene056870.t1	MTR_8g020590	40.909	176	97	3	30	204	19	188	4.17e-37	129
MS.gene056870.t1	MTR_2g041570	42.953	149	84	1	55	202	40	188	1.51e-36	127
MS.gene056870.t1	MTR_2g030895	41.860	172	94	4	55	220	7	178	1.68e-36	127
MS.gene056870.t1	MTR_2g041580	42.953	149	84	1	55	202	40	188	2.09e-36	127
MS.gene056870.t1	MTR_2g030865	41.279	172	95	4	55	220	7	178	5.29e-35	123
MS.gene056870.t1	MTR_3g096330	41.615	161	90	1	25	185	576	732	1.77e-34	130
MS.gene056870.t1	MTR_2g045100	35.329	167	107	1	54	220	40	205	8.48e-34	120
MS.gene056870.t1	MTR_3g019650	32.984	191	121	3	30	220	21	204	2.71e-33	119
MS.gene056870.t1	MTR_3g019710	33.178	214	129	5	7	220	6	205	2.88e-33	119
MS.gene056870.t1	MTR_8g020630	34.555	191	118	3	30	220	22	205	4.76e-33	119
MS.gene056870.t1	MTR_8g020750	36.866	217	122	7	4	217	1	205	5.54e-33	119
MS.gene056870.t1	MTR_2g086620	34.091	220	120	4	2	218	5	202	5.57e-33	118
MS.gene056870.t1	MTR_0284s0010	35.638	188	114	3	30	217	22	202	9.34e-33	118
MS.gene056870.t1	MTR_3g019680	32.243	214	133	5	7	220	3	204	1.31e-32	117
MS.gene056870.t1	MTR_4g010340	32.161	199	127	3	23	221	12	202	4.19e-32	116
MS.gene056870.t1	MTR_6g005380	37.850	214	116	7	5	210	2	206	5.78e-32	116
MS.gene056870.t1	MTR_2g086630	33.182	220	122	4	2	218	5	202	8.36e-32	115
MS.gene056870.t1	MTR_8g020670	32.701	211	131	4	10	220	6	205	9.42e-32	115
MS.gene056870.t1	MTR_2g036120	32.984	191	121	3	30	220	22	205	1.66e-31	114
MS.gene056870.t1	MTR_2g086640	33.641	217	119	4	5	218	7	201	2.11e-31	114
MS.gene056870.t1	MTR_8g020650	34.031	191	119	3	30	220	22	205	3.47e-31	114
MS.gene056870.t1	MTR_7g011340	34.043	188	117	3	30	217	22	202	5.79e-31	113
MS.gene056870.t1	MTR_8g020763	33.918	171	111	2	54	223	20	189	7.83e-31	112
MS.gene056870.t1	MTR_5g031460	30.851	188	123	3	30	217	22	202	2.13e-29	109
MS.gene056870.t1	MTR_2g031300	40.881	159	69	4	55	208	7	145	2.44e-29	107
MS.gene056870.t1	MTR_8g020760	31.019	216	135	5	7	220	4	207	1.57e-28	107
MS.gene056870.t1	MTR_4g052770	32.093	215	122	4	7	218	10	203	2.23e-28	106
MS.gene056870.t1	MTR_2g044040	29.302	215	138	4	6	220	5	205	2.93e-28	106
MS.gene056870.t1	MTR_3g073170	32.632	190	119	4	32	221	27	207	5.50e-28	105
MS.gene056870.t1	MTR_4g052780	31.579	209	121	3	13	218	14	203	8.16e-28	105
MS.gene056870.t1	MTR_8g020770	31.308	214	136	4	10	221	3	207	3.16e-27	103
MS.gene056870.t1	MTR_2g019780	33.333	192	115	4	31	220	28	208	2.55e-26	101
MS.gene056870.t1	MTR_3g019810	28.169	213	131	7	9	220	114	305	3.16e-19	84.7
MS.gene056870.t1	MTR_4g027415	36.719	128	74	3	30	157	22	142	2.20e-18	79.0
MS.gene056870.t1	MTR_3g019610	33.333	114	63	3	6	119	5	105	1.35e-12	62.8
MS.gene056870.t1	MTR_2g072560	36.000	100	58	2	30	129	22	115	1.07e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056870.t1	AT3G10080	67.662	201	64	1	22	222	22	221	8.62e-106	305
MS.gene056870.t1	AT3G10080	67.662	201	64	1	22	222	93	292	7.52e-105	305
MS.gene056870.t1	AT1G02335	39.706	204	114	3	24	224	22	219	2.73e-49	160
MS.gene056870.t1	AT1G18980	42.466	219	111	6	5	220	12	218	5.36e-48	157
MS.gene056870.t1	AT3G04200	42.925	212	109	5	9	213	9	215	8.41e-48	157
MS.gene056870.t1	AT1G18970	40.183	219	116	6	5	220	12	218	1.80e-47	156
MS.gene056870.t1	AT3G62020	39.720	214	117	6	16	224	13	219	2.08e-45	150
MS.gene056870.t1	AT5G26700	37.245	196	115	3	30	224	25	213	3.01e-44	147
MS.gene056870.t1	AT1G09560	38.725	204	116	4	24	224	22	219	8.12e-44	147
MS.gene056870.t1	AT5G38940	40.796	201	110	4	25	220	25	221	9.29e-44	147
MS.gene056870.t1	AT5G38940	40.796	201	110	4	25	220	49	245	1.55e-43	147
MS.gene056870.t1	AT3G04170	38.393	224	125	5	8	225	7	223	6.72e-43	144
MS.gene056870.t1	AT3G05950	39.614	207	114	4	26	226	26	227	7.49e-43	144
MS.gene056870.t1	AT5G39190	38.889	216	120	5	11	220	10	219	7.91e-43	144
MS.gene056870.t1	AT5G38960	41.463	205	110	4	22	220	22	222	1.04e-42	144
MS.gene056870.t1	AT5G39160	38.889	216	120	5	11	220	10	219	1.06e-42	144
MS.gene056870.t1	AT5G39130	38.426	216	121	5	11	220	10	219	1.15e-42	144
MS.gene056870.t1	AT5G38910	39.631	217	119	6	10	220	9	219	1.27e-42	144
MS.gene056870.t1	AT5G20630	39.583	192	109	2	30	220	22	207	3.03e-42	142
MS.gene056870.t1	AT5G38930	39.706	204	114	4	22	220	22	221	5.54e-42	142
MS.gene056870.t1	AT4G14630	38.496	226	126	6	3	220	2	222	8.04e-42	142
MS.gene056870.t1	AT3G05930	37.745	204	117	4	25	224	22	219	9.38e-42	141
MS.gene056870.t1	AT5G39160	39.352	216	115	6	11	220	10	215	2.74e-41	140
MS.gene056870.t1	AT3G04150	40.367	218	118	5	8	218	7	219	4.40e-41	140
MS.gene056870.t1	AT3G04150	38.938	226	123	5	8	218	7	232	1.27e-40	139
MS.gene056870.t1	AT5G61750	41.622	185	96	5	22	203	15	190	2.09e-40	137
MS.gene056870.t1	AT3G62020	41.714	175	96	4	55	224	17	190	3.02e-40	137
MS.gene056870.t1	AT5G39110	38.424	203	115	5	24	220	22	220	4.38e-40	137
MS.gene056870.t1	AT3G04180	37.879	198	112	4	26	217	26	218	1.13e-38	134
MS.gene056870.t1	AT5G39120	36.364	220	122	5	7	220	12	219	1.75e-38	133
MS.gene056870.t1	AT1G72610	38.542	192	111	2	30	220	19	204	2.55e-38	132
MS.gene056870.t1	AT5G39150	37.619	210	119	5	19	220	14	219	3.66e-38	132
MS.gene056870.t1	AT3G04190	38.660	194	108	4	26	213	26	214	5.60e-38	132
MS.gene056870.t1	AT5G39180	38.208	212	115	6	19	220	14	219	6.21e-38	132
MS.gene056870.t1	AT5G39190	35.185	216	106	5	11	220	10	197	3.80e-34	121
MS.gene056870.t1	AT5G39160	35.185	216	106	5	11	220	10	197	4.91e-34	121
MS.gene056870.t1	AT1G10460	34.146	205	125	5	23	221	16	216	5.57e-34	121
MS.gene056870.t1	AT1G74820	35.185	216	128	6	7	219	18	224	1.78e-31	115
MS.gene056870.t1	AT5G38910	33.023	215	99	6	10	220	9	182	1.47e-24	96.3

Find 47 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTTCTGCTGTGTTTGGTTC+AGG	0.218464	1.1:+45765405	MS.gene056870:CDS
GCAAGAACAGATATTGAAAT+TGG	0.257093	1.1:+45765147	MS.gene056870:CDS
CTAATCTACCTTTCTTGTTT+AGG	0.257806	1.1:-45765504	None:intergenic
GGAAAATTTGTAGGGTTTGC+AGG	0.300532	1.1:-45765096	None:intergenic
TCTTCTGCACTCCAGGATTC+TGG	0.310068	1.1:-45765380	None:intergenic
GATGAAGTTGTTACTTTGTT+TGG	0.346407	1.1:+45765345	MS.gene056870:CDS
AAGATACCTTCTGCTGTGTT+TGG	0.348538	1.1:+45765399	MS.gene056870:CDS
CTTCTGCTGTGTTTGGTTCA+GGG	0.370663	1.1:+45765406	MS.gene056870:CDS
GATTCAAGGAAAAGTGTATT+CGG	0.373900	1.1:+45765221	MS.gene056870:CDS
ATGGAAGCTAATATTGGGTT+TGG	0.377081	1.1:-45764946	None:intergenic
TCAGGAAACTTCTCAGAAAC+AGG	0.378732	1.1:+45765060	MS.gene056870:CDS
CAGAAGTCTTGAACTGGATC+AGG	0.380575	1.1:-45764919	None:intergenic
ATTCAAGGAAAAGTGTATTC+GGG	0.402862	1.1:+45765222	MS.gene056870:CDS
TGTCTACACAAAAGAACCTT+TGG	0.410688	1.1:+45764842	MS.gene056870:CDS
GGATTGAGTTCTAAACAGAT+TGG	0.444234	1.1:+45765459	MS.gene056870:CDS
TGTATTAGTTCAGTGGCTCT+TGG	0.445377	1.1:-45765195	None:intergenic
ACTTGAACAAGGTGAGGTTA+TGG	0.446223	1.1:+45765281	MS.gene056870:CDS
TTGAGACCTGGAAAATTTGT+AGG	0.448182	1.1:-45765105	None:intergenic
GAACTAATACATGTGATTCA+AGG	0.461345	1.1:+45765207	MS.gene056870:CDS
GAAGGTATCTTCTGCACTCC+AGG	0.463615	1.1:-45765387	None:intergenic
TTCTCCAACATGAAAACATC+AGG	0.464520	1.1:+45765042	MS.gene056870:CDS
GGTATGCAGAAGTCTTGAAC+TGG	0.465508	1.1:-45764925	None:intergenic
GTTGGAGAAGATAAAGTCAT+TGG	0.494642	1.1:-45765028	None:intergenic
ATAAAATGCACAAGTCCTCT+AGG	0.519148	1.1:-45765309	None:intergenic
AGAACAGATATTGAAATTGG+AGG	0.530145	1.1:+45765150	MS.gene056870:CDS
TTTCCAGGTCTCAACACACT+AGG	0.535831	1.1:+45765114	MS.gene056870:CDS
AATTAGATCCTAAACAAGAA+AGG	0.545557	1.1:+45765496	MS.gene056870:CDS
AATCACATGTATTAGTTCAG+TGG	0.548042	1.1:-45765202	None:intergenic
GTCTGAGGCTAATGTGGTGA+TGG	0.550261	1.1:-45764896	None:intergenic
TGAGACCTGGAAAATTTGTA+GGG	0.555602	1.1:-45765104	None:intergenic
ATCCCTAGTGTGTTGAGACC+TGG	0.557920	1.1:-45765117	None:intergenic
TGTGGTGATGGCTAAGTTGA+GGG	0.572606	1.1:-45764884	None:intergenic
TTCCAGGTCTCAACACACTA+GGG	0.576341	1.1:+45765115	MS.gene056870:CDS
GCATGGGAGAATGGTGTGAA+AGG	0.587406	1.1:-45764983	None:intergenic
AGAAGTCTTGAACTGGATCA+GGG	0.590746	1.1:-45764918	None:intergenic
AAATAGAGAGCAAAAGCCAA+AGG	0.599549	1.1:-45764858	None:intergenic
TTGAACTGGATCAGGGTCTG+AGG	0.599642	1.1:-45764911	None:intergenic
CCTGAACCAAACACAGCAGA+AGG	0.603153	1.1:-45765405	None:intergenic
ATCAGGGTCTGAGGCTAATG+TGG	0.603475	1.1:-45764902	None:intergenic
TAGAATACTTGAACAAGGTG+AGG	0.623266	1.1:+45765275	MS.gene056870:CDS
GTTTGGTTCAGGGATTGATG+AGG	0.628382	1.1:+45765416	MS.gene056870:CDS
GAGGTTATGGTGTTTCCTAG+AGG	0.631010	1.1:+45765294	MS.gene056870:CDS
TTTGCTAGAATACTTGAACA+AGG	0.648470	1.1:+45765270	MS.gene056870:CDS
GTGGCTCTTGGATGAAAATG+TGG	0.649171	1.1:-45765183	None:intergenic
ATGTGGTGATGGCTAAGTTG+AGG	0.657994	1.1:-45764885	None:intergenic
GCTCTTGGATGAAAATGTGG+TGG	0.675073	1.1:-45765180	None:intergenic
GTCATTGGTGATGACTTGTG+AGG	0.738706	1.1:-45765013	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAATGGAAGCTAATATT+GGG	-	chr1.1:45764954-45764973	None:intergenic	20.0%
!!!	TTTTGTTGATTCTAACAATA+AGG	+	chr1.1:45765245-45765264	MS.gene056870:CDS	20.0%
!	AATTAGATCCTAAACAAGAA+AGG	+	chr1.1:45765496-45765515	MS.gene056870:CDS	25.0%
!!	AGGATCTAATTTTCTTTTCA+TGG	-	chr1.1:45765487-45765506	None:intergenic	25.0%
!!!	GTTTTAATGGAAGCTAATAT+TGG	-	chr1.1:45764955-45764974	None:intergenic	25.0%
	AATCACATGTATTAGTTCAG+TGG	-	chr1.1:45765205-45765224	None:intergenic	30.0%
	AGAACAGATATTGAAATTGG+AGG	+	chr1.1:45765150-45765169	MS.gene056870:CDS	30.0%
	GAACTAATACATGTGATTCA+AGG	+	chr1.1:45765207-45765226	MS.gene056870:CDS	30.0%
	GCAAGAACAGATATTGAAAT+TGG	+	chr1.1:45765147-45765166	MS.gene056870:CDS	30.0%
	TTTGCTAGAATACTTGAACA+AGG	+	chr1.1:45765270-45765289	MS.gene056870:CDS	30.0%
!	ATTCAAGGAAAAGTGTATTC+GGG	+	chr1.1:45765222-45765241	MS.gene056870:CDS	30.0%
!	GAGCTTTTACAAAAAGCTTT+TGG	+	chr1.1:45765438-45765457	MS.gene056870:CDS	30.0%
!	GATTCAAGGAAAAGTGTATT+CGG	+	chr1.1:45765221-45765240	MS.gene056870:CDS	30.0%
!	GTGCATTTTATGATGAATGT+TGG	+	chr1.1:45765321-45765340	MS.gene056870:CDS	30.0%
!!	AAAGGTGTGATGTGTTTTAA+TGG	-	chr1.1:45764968-45764987	None:intergenic	30.0%
!!	GATGAAGTTGTTACTTTGTT+TGG	+	chr1.1:45765345-45765364	MS.gene056870:CDS	30.0%
	AAATAGAGAGCAAAAGCCAA+AGG	-	chr1.1:45764861-45764880	None:intergenic	35.0%
	ATAAAATGCACAAGTCCTCT+AGG	-	chr1.1:45765312-45765331	None:intergenic	35.0%
	ATGGAAGCTAATATTGGGTT+TGG	-	chr1.1:45764949-45764968	None:intergenic	35.0%
	GTTGGAGAAGATAAAGTCAT+TGG	-	chr1.1:45765031-45765050	None:intergenic	35.0%
	TAGAATACTTGAACAAGGTG+AGG	+	chr1.1:45765275-45765294	MS.gene056870:CDS	35.0%
	TGAGACCTGGAAAATTTGTA+GGG	-	chr1.1:45765107-45765126	None:intergenic	35.0%
	TGTCTACACAAAAGAACCTT+TGG	+	chr1.1:45764842-45764861	MS.gene056870:CDS	35.0%
	TTCTCCAACATGAAAACATC+AGG	+	chr1.1:45765042-45765061	MS.gene056870:CDS	35.0%
	TTGAGACCTGGAAAATTTGT+AGG	-	chr1.1:45765108-45765127	None:intergenic	35.0%
!	GTTTCCTGATGTTTTCATGT+TGG	-	chr1.1:45765049-45765068	None:intergenic	35.0%
!!	AGTTTTAATAGCCAGAATCC+TGG	+	chr1.1:45765369-45765388	MS.gene056870:CDS	35.0%
!!	GGATTGAGTTCTAAACAGAT+TGG	+	chr1.1:45765459-45765478	MS.gene056870:CDS	35.0%
	AAGATACCTTCTGCTGTGTT+TGG	+	chr1.1:45765399-45765418	MS.gene056870:CDS	40.0%
	ACTTGAACAAGGTGAGGTTA+TGG	+	chr1.1:45765281-45765300	MS.gene056870:CDS	40.0%
	AGAAGTCTTGAACTGGATCA+GGG	-	chr1.1:45764921-45764940	None:intergenic	40.0%
	GGAAAATTTGTAGGGTTTGC+AGG	-	chr1.1:45765099-45765118	None:intergenic	40.0%
	TCAGGAAACTTCTCAGAAAC+AGG	+	chr1.1:45765060-45765079	MS.gene056870:CDS	40.0%
	TGTATTAGTTCAGTGGCTCT+TGG	-	chr1.1:45765198-45765217	None:intergenic	40.0%
!	ACTTGTGAGGAGTTTTTGCA+TGG	-	chr1.1:45765003-45765022	None:intergenic	40.0%
!	CTTGTGAGGAGTTTTTGCAT+GGG	-	chr1.1:45765002-45765021	None:intergenic	40.0%
!	GCAAACCCTACAAATTTTCC+AGG	+	chr1.1:45765099-45765118	MS.gene056870:CDS	40.0%
	CAGAAGTCTTGAACTGGATC+AGG	-	chr1.1:45764922-45764941	None:intergenic	45.0%
	GAGGTTATGGTGTTTCCTAG+AGG	+	chr1.1:45765294-45765313	MS.gene056870:CDS	45.0%
	GCTCTTGGATGAAAATGTGG+TGG	-	chr1.1:45765183-45765202	None:intergenic	45.0%
	GGTATGCAGAAGTCTTGAAC+TGG	-	chr1.1:45764928-45764947	None:intergenic	45.0%
	GTGGCTCTTGGATGAAAATG+TGG	-	chr1.1:45765186-45765205	None:intergenic	45.0%
	TTCCAGGTCTCAACACACTA+GGG	+	chr1.1:45765115-45765134	MS.gene056870:CDS	45.0%
	TTTCCAGGTCTCAACACACT+AGG	+	chr1.1:45765114-45765133	MS.gene056870:CDS	45.0%
!	CTTCTGCTGTGTTTGGTTCA+GGG	+	chr1.1:45765406-45765425	MS.gene056870:CDS	45.0%
!	GGAGTTTTTGCATGGGAGAA+TGG	-	chr1.1:45764995-45765014	None:intergenic	45.0%
!	GTTTGGTTCAGGGATTGATG+AGG	+	chr1.1:45765416-45765435	MS.gene056870:CDS	45.0%
!!	ATGTGGTGATGGCTAAGTTG+AGG	-	chr1.1:45764888-45764907	None:intergenic	45.0%
!!	GTCATTGGTGATGACTTGTG+AGG	-	chr1.1:45765016-45765035	None:intergenic	45.0%
!!	TGTGGTGATGGCTAAGTTGA+GGG	-	chr1.1:45764887-45764906	None:intergenic	45.0%
	ATCCCTAGTGTGTTGAGACC+TGG	-	chr1.1:45765120-45765139	None:intergenic	50.0%
	CCTGAACCAAACACAGCAGA+AGG	-	chr1.1:45765408-45765427	None:intergenic	50.0%
	GCATGGGAGAATGGTGTGAA+AGG	-	chr1.1:45764986-45765005	None:intergenic	50.0%
	TCTTCTGCACTCCAGGATTC+TGG	-	chr1.1:45765383-45765402	None:intergenic	50.0%
	TTGAACTGGATCAGGGTCTG+AGG	-	chr1.1:45764914-45764933	None:intergenic	50.0%
!	ATCAGGGTCTGAGGCTAATG+TGG	-	chr1.1:45764905-45764924	None:intergenic	50.0%
!	CCTTCTGCTGTGTTTGGTTC+AGG	+	chr1.1:45765405-45765424	MS.gene056870:CDS	50.0%
!	GTCTGAGGCTAATGTGGTGA+TGG	-	chr1.1:45764899-45764918	None:intergenic	50.0%
!!	GAAGGTATCTTCTGCACTCC+AGG	-	chr1.1:45765390-45765409	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	45764841	45765521	45764841	ID=MS.gene056870
chr1.1	mRNA	45764841	45765521	45764841	ID=MS.gene056870.t1;Parent=MS.gene056870
chr1.1	exon	45764841	45765521	45764841	ID=MS.gene056870.t1.exon1;Parent=MS.gene056870.t1
chr1.1	CDS	45764841	45765521	45764841	ID=cds.MS.gene056870.t1;Parent=MS.gene056870.t1

Gene Sequence

>MS.gene056870

ATGTCTACACAAAAGAACCTTTGGCTTTTGCTCTCTATTTTCTCCCTCAACTTAGCCATCACCACATTAGCCTCAGACCCTGATCCAGTTCAAGACTTCTGCATACCAAACCCAATATTAGCTTCCATTAAAACACATCACACCTTTCACACCATTCTCCCATGCAAAAACTCCTCACAAGTCATCACCAATGACTTTATCTTCTCCAACATGAAAACATCAGGAAACTTCTCAGAAACAGGTTTAGCAGTAATACCTGCAAACCCTACAAATTTTCCAGGTCTCAACACACTAGGGATGTCATTTGCAAGAACAGATATTGAAATTGGAGGAATCAATCCACCACATTTTCATCCAAGAGCCACTGAACTAATACATGTGATTCAAGGAAAAGTGTATTCGGGTTTTGTTGATTCTAACAATAAGGTTTTTGCTAGAATACTTGAACAAGGTGAGGTTATGGTGTTTCCTAGAGGACTTGTGCATTTTATGATGAATGTTGGTGATGAAGTTGTTACTTTGTTTGGTAGTTTTAATAGCCAGAATCCTGGAGTGCAGAAGATACCTTCTGCTGTGTTTGGTTCAGGGATTGATGAGGAGCTTTTACAAAAAGCTTTTGGATTGAGTTCTAAACAGATTGGAACCATGAAAAGAAAATTAGATCCTAAACAAGAAAGGTAG

Protein sequence

>MS.gene056870.t1

MSTQKNLWLLLSIFSLNLAITTLASDPDPVQDFCIPNPILASIKTHHTFHTILPCKNSSQVITNDFIFSNMKTSGNFSETGLAVIPANPTNFPGLNTLGMSFARTDIEIGGINPPHFHPRATELIHVIQGKVYSGFVDSNNKVFARILEQGEVMVFPRGLVHFMMNVGDEVVTLFGSFNSQNPGVQKIPSAVFGSGIDEELLQKAFGLSSKQIGTMKRKLDPKQER