Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42319.t1 | XP_013462149.1 | 99.3 | 301 | 2 | 0 | 1 | 301 | 4 | 304 | 3.00E-167 | 597.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42319.t1 | Q9FWS6 | 69.2 | 305 | 82 | 2 | 7 | 300 | 3 | 306 | 1.9e-114 | 413.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42319.t1 | B7FJ72 | 99.3 | 301 | 2 | 0 | 1 | 301 | 4 | 304 | 2.2e-167 | 597.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050315 | MS.gene42319 | 0.806323 | 8.70E-50 | -1.69E-46 |
| MS.gene051171 | MS.gene42319 | 0.811921 | 5.50E-51 | -1.69E-46 |
| MS.gene051208 | MS.gene42319 | 0.822464 | 2.34E-53 | -1.69E-46 |
| MS.gene052589 | MS.gene42319 | 0.821236 | 4.49E-53 | -1.69E-46 |
| MS.gene052590 | MS.gene42319 | 0.821163 | 4.67E-53 | -1.69E-46 |
| MS.gene053330 | MS.gene42319 | 0.884743 | 1.48E-71 | -1.69E-46 |
| MS.gene055217 | MS.gene42319 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene055488 | MS.gene42319 | -0.81089 | 9.20E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene42319 | 0.810514 | 1.11E-50 | -1.69E-46 |
| MS.gene056305 | MS.gene42319 | 0.827452 | 1.55E-54 | -1.69E-46 |
| MS.gene056442 | MS.gene42319 | 0.838355 | 3.02E-57 | -1.69E-46 |
| MS.gene056633 | MS.gene42319 | 0.854409 | 1.26E-61 | -1.69E-46 |
| MS.gene058746 | MS.gene42319 | 0.839484 | 1.54E-57 | -1.69E-46 |
| MS.gene059512 | MS.gene42319 | 0.803399 | 3.55E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42319.t1 | MTR_3g112160 | 99.336 | 301 | 2 | 0 | 1 | 301 | 4 | 304 | 0.0 | 622 |
| MS.gene42319.t1 | MTR_3g112160 | 99.127 | 229 | 2 | 0 | 1 | 229 | 4 | 232 | 3.73e-170 | 472 |
| MS.gene42319.t1 | MTR_1g022485 | 70.323 | 310 | 80 | 2 | 1 | 301 | 35 | 341 | 1.35e-159 | 450 |
| MS.gene42319.t1 | MTR_5g023110 | 36.571 | 175 | 104 | 4 | 128 | 300 | 141 | 310 | 5.21e-27 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42319.t1 | AT1G75380 | 74.545 | 275 | 69 | 1 | 26 | 300 | 33 | 306 | 9.92e-154 | 434 |
| MS.gene42319.t1 | AT1G75380 | 74.545 | 275 | 69 | 1 | 26 | 300 | 33 | 306 | 9.92e-154 | 434 |
| MS.gene42319.t1 | AT1G75380 | 74.545 | 275 | 69 | 1 | 26 | 300 | 33 | 306 | 9.92e-154 | 434 |
| MS.gene42319.t1 | AT1G75380 | 74.545 | 275 | 69 | 1 | 26 | 300 | 33 | 306 | 9.92e-154 | 434 |
| MS.gene42319.t1 | AT1G19660 | 73.188 | 276 | 72 | 2 | 26 | 300 | 36 | 310 | 1.33e-150 | 426 |
| MS.gene42319.t1 | AT1G19660 | 73.188 | 276 | 72 | 2 | 26 | 300 | 36 | 310 | 1.33e-150 | 426 |
| MS.gene42319.t1 | AT1G19660 | 72.826 | 276 | 73 | 2 | 26 | 300 | 36 | 310 | 1.44e-149 | 424 |
| MS.gene42319.t1 | AT5G66050 | 36.723 | 177 | 104 | 4 | 127 | 301 | 49 | 219 | 3.28e-23 | 96.7 |
| MS.gene42319.t1 | AT5G66050 | 36.723 | 177 | 104 | 4 | 127 | 301 | 143 | 313 | 5.78e-23 | 97.4 |
| MS.gene42319.t1 | AT5G66050 | 36.723 | 177 | 104 | 4 | 127 | 301 | 143 | 313 | 7.93e-23 | 97.4 |
| MS.gene42319.t1 | AT5G66050 | 34.239 | 184 | 113 | 4 | 127 | 308 | 143 | 320 | 1.93e-19 | 87.8 |
Find 79 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACAAGTCAACAAGTATT+TGG | 0.238673 | 3.2:-89443801 | MS.gene42319:CDS |
| AAAAGACATACAAACGATTA+TGG | 0.245394 | 3.2:+89444784 | None:intergenic |
| ACATGGCAAGAAAGGGAATT+AGG | 0.247322 | 3.2:+89445926 | None:intergenic |
| CGATCCAGTTCAGTAAATAA+TGG | 0.329877 | 3.2:+89443710 | None:intergenic |
| TCCATCTTCAACACAATTGC+AGG | 0.355266 | 3.2:+89444830 | None:intergenic |
| GTCCTCCATGAGGGCTGTTA+TGG | 0.367780 | 3.2:+89444876 | None:intergenic |
| CCCTCATGGAGGACTTCTTC+CGG | 0.368244 | 3.2:-89444867 | MS.gene42319:CDS |
| TTCAAATGGTAGTGGAAGTA+TGG | 0.371169 | 3.2:-89445855 | MS.gene42319:CDS |
| TGGCCCATTATTTACTGAAC+TGG | 0.375188 | 3.2:-89443714 | MS.gene42319:CDS |
| GAGGTGAAGAGTGGAGGAGA+TGG | 0.376747 | 3.2:-89444941 | MS.gene42319:CDS |
| TCATATTTACATGGCAAGAA+AGG | 0.393581 | 3.2:+89445918 | None:intergenic |
| TCAACACAAGGCTTACCATT+TGG | 0.407225 | 3.2:+89443490 | None:intergenic |
| AAAGACATACAAACGATTAT+GGG | 0.408082 | 3.2:+89444785 | None:intergenic |
| AAATACTTGTTGACTTGTAT+AGG | 0.410743 | 3.2:+89443803 | None:intergenic |
| AAGAGTTACTAAGAGAGTTC+AGG | 0.417338 | 3.2:-89444256 | MS.gene42319:CDS |
| GCGTTGATTGGTCCAATCAT+AGG | 0.427412 | 3.2:+89446001 | None:intergenic |
| GATGCCAAGTGTCTTGTTAA+TGG | 0.431725 | 3.2:-89444615 | MS.gene42319:CDS |
| CTACTACAACCAGCGTTGAT+TGG | 0.432408 | 3.2:+89445989 | None:intergenic |
| GGAATGAGAGTAATTGAATC+AGG | 0.437048 | 3.2:-89443767 | MS.gene42319:CDS |
| GATCCAGTTCAGTAAATAAT+GGG | 0.438185 | 3.2:+89443711 | None:intergenic |
| GCAGGATGTGGTGCATAATC+CGG | 0.457419 | 3.2:+89444848 | None:intergenic |
| AGGTGAAGAGTGGAGGAGAT+GGG | 0.465253 | 3.2:-89444940 | MS.gene42319:CDS |
| TGACTTATTTGCAGACCAAA+TGG | 0.466130 | 3.2:-89443505 | MS.gene42319:intron |
| GAAGGAGATGATTGACAAGA+TGG | 0.467393 | 3.2:-89444418 | MS.gene42319:CDS |
| AACTCATCTTCAAATGGTAG+TGG | 0.476288 | 3.2:-89445863 | MS.gene42319:CDS |
| CATATTTACATGGCAAGAAA+GGG | 0.486267 | 3.2:+89445919 | None:intergenic |
| TGCACTTTCTCATATTTACA+TGG | 0.491468 | 3.2:+89445909 | None:intergenic |
| AATTCTACTATTCTTGAAGC+AGG | 0.491817 | 3.2:-89445797 | MS.gene42319:intron |
| TGTGTAGTTGAGGTGAAGAG+TGG | 0.494302 | 3.2:-89444950 | MS.gene42319:intron |
| TTGAAGATGGAGGATGGAAC+TGG | 0.494500 | 3.2:-89444818 | MS.gene42319:CDS |
| GATAAAATGGTTTGTGTGAA+AGG | 0.496281 | 3.2:-89446049 | None:intergenic |
| ACTCAGTCCCCTGGTTCAGA+TGG | 0.500433 | 3.2:-89443734 | MS.gene42319:CDS |
| AAGTATTTGGCTTACAGTGA+TGG | 0.500663 | 3.2:-89443788 | MS.gene42319:CDS |
| AAGTGTCTTGTTAATGGCAG+CGG | 0.507255 | 3.2:-89444609 | MS.gene42319:CDS |
| TGCGTCCATAACAGCCCTCA+TGG | 0.507711 | 3.2:-89444881 | MS.gene42319:CDS |
| AATAATGGGCCATCTGAACC+AGG | 0.513864 | 3.2:+89443725 | None:intergenic |
| GTGCAAAAGATTGAACTCCT+TGG | 0.528331 | 3.2:+89443465 | None:intergenic |
| AGTTTCAACTCATCTTCAAA+TGG | 0.531934 | 3.2:-89445869 | MS.gene42319:CDS |
| CAAAACTATTACCAGCGTCT+TGG | 0.537387 | 3.2:+89443410 | None:intergenic |
| ATCCAGCATTGGAATGTCGA+TGG | 0.538707 | 3.2:-89442477 | MS.gene42319:intron |
| AACTCCTTGGTTTCAACACA+AGG | 0.539583 | 3.2:+89443478 | None:intergenic |
| AGTGTTGCTATGCCTATGAT+TGG | 0.546554 | 3.2:-89446013 | MS.gene42319:CDS |
| ATGGGTTCATAGTCAAAATG+AGG | 0.552865 | 3.2:-89444922 | MS.gene42319:CDS |
| TGCTCAGCTATATCTTTCCA+AGG | 0.554143 | 3.2:-89444223 | MS.gene42319:intron |
| TCCTGCAATTGTGTTGAAGA+TGG | 0.554227 | 3.2:-89444831 | MS.gene42319:CDS |
| ATGAATTACCTTGCATCTGA+CGG | 0.554836 | 3.2:+89444054 | None:intergenic |
| TTCAACACAATTGCAGGATG+TGG | 0.559028 | 3.2:+89444836 | None:intergenic |
| AAGGAGATGATTGACAAGAT+GGG | 0.563238 | 3.2:-89444417 | MS.gene42319:CDS |
| TCCAGCATTGGAATGTCGAT+GGG | 0.580170 | 3.2:-89442476 | MS.gene42319:intron |
| AAACTGTCAACTCAGTCCCC+TGG | 0.581648 | 3.2:-89443743 | MS.gene42319:CDS |
| TTGTAGTAGAATTGAATTGT+GGG | 0.582297 | 3.2:-89445975 | MS.gene42319:CDS |
| TTCACTACTTGATATAAAGT+AGG | 0.583362 | 3.2:+89444438 | None:intergenic |
| GTTGTAGTAGAATTGAATTG+TGG | 0.585443 | 3.2:-89445976 | MS.gene42319:CDS |
| TACTTTATATCAAGTAGTGA+AGG | 0.586601 | 3.2:-89444436 | MS.gene42319:CDS |
| CATTATTTACTGAACTGGAT+CGG | 0.591707 | 3.2:-89443709 | MS.gene42319:intron |
| CAACATTGCCGTCAGATGCA+AGG | 0.598286 | 3.2:-89444062 | MS.gene42319:intron |
| TTCATAGTCAAAATGAGGGA+TGG | 0.606214 | 3.2:-89444917 | MS.gene42319:CDS |
| CCGGAAGAAGTCCTCCATGA+GGG | 0.609077 | 3.2:+89444867 | None:intergenic |
| AAGACATACAAACGATTATG+GGG | 0.611378 | 3.2:+89444786 | None:intergenic |
| AGTTACTAAGAGAGTTCAGG+AGG | 0.616947 | 3.2:-89444253 | MS.gene42319:CDS |
| GCTGCCATTAACAAGACACT+TGG | 0.631772 | 3.2:+89444611 | None:intergenic |
| GACTTATGAGTATACACAAG+GGG | 0.633649 | 3.2:+89442415 | None:intergenic |
| GTAGTTGAGGTGAAGAGTGG+AGG | 0.641244 | 3.2:-89444947 | MS.gene42319:intron |
| TGATAGCATCTGAAGGTCGA+AGG | 0.644393 | 3.2:+89444083 | None:intergenic |
| ATTGTGTTGAAGATGGAGGA+TGG | 0.647763 | 3.2:-89444824 | MS.gene42319:CDS |
| TGGGTTCATAGTCAAAATGA+GGG | 0.648695 | 3.2:-89444921 | MS.gene42319:CDS |
| TAAGCCTTGTGTTGAAACCA+AGG | 0.655141 | 3.2:-89443482 | MS.gene42319:CDS |
| GAAGAGCGCTACCAAGACGC+TGG | 0.659837 | 3.2:-89443421 | MS.gene42319:intron |
| ATGATTGGACCAATCAACGC+TGG | 0.660475 | 3.2:-89445998 | MS.gene42319:CDS |
| TAATGGGCCATCTGAACCAG+GGG | 0.661956 | 3.2:+89443727 | None:intergenic |
| TACACAAGGGGAGAAGCGAA+CGG | 0.666819 | 3.2:+89442427 | None:intergenic |
| GCAATGTTGATAGCATCTGA+AGG | 0.668734 | 3.2:+89444076 | None:intergenic |
| TGTAGTAGAATTGAATTGTG+GGG | 0.671461 | 3.2:-89445974 | MS.gene42319:CDS |
| AAGACTTATGAGTATACACA+AGG | 0.674289 | 3.2:+89442413 | None:intergenic |
| ATAATGGGCCATCTGAACCA+GGG | 0.677787 | 3.2:+89443726 | None:intergenic |
| TGCAATTGTGTTGAAGATGG+AGG | 0.695717 | 3.2:-89444828 | MS.gene42319:CDS |
| TCCGGAAGAAGTCCTCCATG+AGG | 0.699210 | 3.2:+89444866 | None:intergenic |
| AGACTTATGAGTATACACAA+GGG | 0.729227 | 3.2:+89442414 | None:intergenic |
| GTCCATAACAGCCCTCATGG+AGG | 0.747707 | 3.2:-89444878 | MS.gene42319:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAAAATAAATAAT+TGG | + | chr3.2:89443030-89443049 | None:intergenic | 0.0% |
| !! | ATAAAATAAAATAAATAATT+GGG | + | chr3.2:89443029-89443048 | None:intergenic | 0.0% |
| !!! | ATGAAAATAAAATAGTTTTA+TGG | + | chr3.2:89442830-89442849 | None:intergenic | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | - | chr3.2:89445570-89445589 | MS.gene42319:intron | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | + | chr3.2:89445589-89445570 | None:intergenic | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | + | chr3.2:89445747-89445766 | None:intergenic | 10.0% |
| !!! | TGAAAATAAAATAGTTTTAT+GGG | + | chr3.2:89442829-89442848 | None:intergenic | 10.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | - | chr3.2:89445748-89445767 | MS.gene42319:intron | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | - | chr3.2:89445808-89445827 | MS.gene42319:CDS | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | + | chr3.2:89445827-89445808 | None:intergenic | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | - | chr3.2:89445749-89445768 | MS.gene42319:intron | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | - | chr3.2:89445809-89445828 | MS.gene42319:CDS | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | + | chr3.2:89445828-89445809 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAAAATTTGCA+GGG | + | chr3.2:89445629-89445648 | None:intergenic | 15.0% |
| !! | GTAAAAAATAAGAAAAAGAA+AGG | + | chr3.2:89445884-89445903 | None:intergenic | 15.0% |
| !! | TCAAAAAAAAAAAAATTTGC+AGG | + | chr3.2:89445630-89445649 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAACAATTTTGCA+AGG | + | chr3.2:89445597-89445616 | None:intergenic | 15.0% |
| !!! | AAATTGTTTTTTTTTGGAAA+TGG | + | chr3.2:89445685-89445704 | None:intergenic | 15.0% |
| !!! | AATTGTTTTTTTTTTGGAAA+TGG | - | chr3.2:89445602-89445621 | MS.gene42319:intron | 15.0% |
| !!! | ACAGTTACTTTAAAAAAAAA+TGG | + | chr3.2:89443394-89443413 | None:intergenic | 15.0% |
| !!! | CAAAATTTTTTTATAGGTTT+TGG | - | chr3.2:89445510-89445529 | MS.gene42319:intron | 15.0% |
| !!! | GTGAAAAATTGTTTTTTTAT+TGG | - | chr3.2:89442715-89442734 | MS.gene42319:intron | 15.0% |
| !!! | TTATATAAGATAGCAAATTT+TGG | - | chr3.2:89445914-89445933 | MS.gene42319:CDS | 15.0% |
| !!! | TTGCAAAATTGTTTTTTTTT+TGG | - | chr3.2:89445596-89445615 | MS.gene42319:intron | 15.0% |
| !! | ACCAAAATAATATATAGGAT+AGG | + | chr3.2:89443766-89443785 | None:intergenic | 20.0% |
| !! | ACTACAATACAATTAAGATT+AGG | + | chr3.2:89444105-89444124 | None:intergenic | 20.0% |
| !! | AGAGTAAAATAAAATTTCCA+AGG | + | chr3.2:89443447-89443466 | None:intergenic | 20.0% |
| !! | ATTACTCATAAAAAAGTTGT+AGG | + | chr3.2:89443177-89443196 | None:intergenic | 20.0% |
| !! | TATCTATACACTAAAGAAAT+TGG | - | chr3.2:89443212-89443231 | MS.gene42319:intron | 20.0% |
| !! | TCATCACCAAAATAATATAT+AGG | + | chr3.2:89443771-89443790 | None:intergenic | 20.0% |
| !! | TTGTTTATCAAAGATTTAAC+TGG | - | chr3.2:89444609-89444628 | MS.gene42319:CDS | 20.0% |
| !!! | AACCTATAAAAAAATTTTGC+AGG | + | chr3.2:89445509-89445528 | None:intergenic | 20.0% |
| !!! | ACCTATAAAAAAATTTTGCA+GGG | + | chr3.2:89445508-89445527 | None:intergenic | 20.0% |
| !!! | CAAAAAAAAACAATTTTGCA+GGG | - | chr3.2:89445689-89445708 | MS.gene42319:intron | 20.0% |
| !!! | GAAATTTTATTTTACTCTCA+TGG | - | chr3.2:89443449-89443468 | MS.gene42319:CDS | 20.0% |
| !!! | TATCATACAAGTTTACTTTT+TGG | - | chr3.2:89443738-89443757 | MS.gene42319:CDS | 20.0% |
| !!! | TCCTATCCTATATATTATTT+TGG | - | chr3.2:89443762-89443781 | MS.gene42319:CDS | 20.0% |
| !!! | TTTTCTTTTTGGCTAAAATA+TGG | - | chr3.2:89445444-89445463 | MS.gene42319:intron | 20.0% |
| ! | AAAAGACATACAAACGATTA+TGG | + | chr3.2:89443673-89443692 | None:intergenic | 25.0% |
| ! | AAAGACATACAAACGATTAT+GGG | + | chr3.2:89443672-89443691 | None:intergenic | 25.0% |
| ! | AATTTGAACTATATCACTTG+AGG | + | chr3.2:89443315-89443334 | None:intergenic | 25.0% |
| ! | ATGGAGAATCAATAAAACAA+CGG | + | chr3.2:89443375-89443394 | None:intergenic | 25.0% |
| ! | GAAAATCAATAATGATTAGC+AGG | + | chr3.2:89445183-89445202 | None:intergenic | 25.0% |
| ! | GAGAATATGTTACAGAAAAA+CGG | + | chr3.2:89443953-89443972 | None:intergenic | 25.0% |
| ! | GTAAATTAATCACATGTGTA+TGG | - | chr3.2:89443085-89443104 | MS.gene42319:intron | 25.0% |
| ! | TAAAAAAGTTGTAGGTATAG+TGG | + | chr3.2:89443169-89443188 | None:intergenic | 25.0% |
| ! | TACTTTATATCAAGTAGTGA+AGG | - | chr3.2:89444018-89444037 | MS.gene42319:intron | 25.0% |
| ! | TATACAAGTCAACAAGTATT+TGG | - | chr3.2:89444653-89444672 | MS.gene42319:intron | 25.0% |
| ! | TCATATATGCTTAGTTTAGT+TGG | - | chr3.2:89442693-89442712 | MS.gene42319:intron | 25.0% |
| ! | TTCACTACTTGATATAAAGT+AGG | + | chr3.2:89444019-89444038 | None:intergenic | 25.0% |
| ! | TTGCATTAGTAGTAAAATGT+TGG | - | chr3.2:89443914-89443933 | MS.gene42319:intron | 25.0% |
| ! | TTGTAGTAGAATTGAATTGT+GGG | - | chr3.2:89442479-89442498 | MS.gene42319:intron | 25.0% |
| !! | ACATTTTACTACTAATGCAA+TGG | + | chr3.2:89443914-89443933 | None:intergenic | 25.0% |
| !! | CCAAAAAAAAACAATTTTGC+AGG | - | chr3.2:89445688-89445707 | MS.gene42319:intron | 25.0% |
| !!! | AAATACTTGTTGACTTGTAT+AGG | + | chr3.2:89444654-89444673 | None:intergenic | 25.0% |
| !!! | CCTGCAAAATTGTTTTTTTT+TGG | + | chr3.2:89445691-89445710 | None:intergenic | 25.0% |
| !!! | GTATTACTTGTTTTTGGTAT+AGG | - | chr3.2:89444317-89444336 | MS.gene42319:intron | 25.0% |
| !!! | GTGAAAATAAATTTGTTGTG+TGG | - | chr3.2:89443475-89443494 | MS.gene42319:CDS | 25.0% |
| !!! | TCCCTGCAAAATTTTTTTAT+AGG | - | chr3.2:89445504-89445523 | MS.gene42319:intron | 25.0% |
| AAAACTTCTAGGTTCCATTT+AGG | + | chr3.2:89444546-89444565 | None:intergenic | 30.0% | |
| AAGACATACAAACGATTATG+GGG | + | chr3.2:89443671-89443690 | None:intergenic | 30.0% | |
| AAGACTTATGAGTATACACA+AGG | + | chr3.2:89446044-89446063 | None:intergenic | 30.0% | |
| AATTCTACTATTCTTGAAGC+AGG | - | chr3.2:89442657-89442676 | MS.gene42319:intron | 30.0% | |
| ACACTAATTACTAACTCATG+CGG | + | chr3.2:89442760-89442779 | None:intergenic | 30.0% | |
| AGACTTATGAGTATACACAA+GGG | + | chr3.2:89446043-89446062 | None:intergenic | 30.0% | |
| AGTATTCATAATCTCTGTTC+TGG | - | chr3.2:89444815-89444834 | MS.gene42319:CDS | 30.0% | |
| AGTTTCAACTCATCTTCAAA+TGG | - | chr3.2:89442585-89442604 | MS.gene42319:intron | 30.0% | |
| ATAAATAATTGGGTCTGTAC+TGG | + | chr3.2:89443019-89443038 | None:intergenic | 30.0% | |
| ATATAGTTCAAATTCCACCT+GGG | - | chr3.2:89443321-89443340 | MS.gene42319:intron | 30.0% | |
| ATTCATGATGCAACATAGAA+AGG | + | chr3.2:89443700-89443719 | None:intergenic | 30.0% | |
| CAACCATATAGTTAGTTGTT+TGG | + | chr3.2:89443981-89444000 | None:intergenic | 30.0% | |
| CATATTTACATGGCAAGAAA+GGG | + | chr3.2:89442538-89442557 | None:intergenic | 30.0% | |
| CATTATTTACTGAACTGGAT+CGG | - | chr3.2:89444745-89444764 | MS.gene42319:intron | 30.0% | |
| GAAAGGCTAAAATATGACAT+TGG | + | chr3.2:89445867-89445886 | None:intergenic | 30.0% | |
| GAACCAAACAACTAACTATA+TGG | - | chr3.2:89443975-89443994 | MS.gene42319:intron | 30.0% | |
| GAATTTGATCCAAAACTTCT+AGG | + | chr3.2:89444557-89444576 | None:intergenic | 30.0% | |
| GATCCAGTTCAGTAAATAAT+GGG | + | chr3.2:89444746-89444765 | None:intergenic | 30.0% | |
| GATGAACCACAAAATTACAT+TGG | + | chr3.2:89443804-89443823 | None:intergenic | 30.0% | |
| GGACCAACTTAATCAATTTA+GGG | - | chr3.2:89445300-89445319 | MS.gene42319:intron | 30.0% | |
| GTTGTAGTAGAATTGAATTG+TGG | - | chr3.2:89442478-89442497 | MS.gene42319:intron | 30.0% | |
| TCACAAGATTACATTTCTTG+TGG | - | chr3.2:89445201-89445220 | MS.gene42319:intron | 30.0% | |
| TCATATTTACATGGCAAGAA+AGG | + | chr3.2:89442539-89442558 | None:intergenic | 30.0% | |
| TGCACTTTCTCATATTTACA+TGG | + | chr3.2:89442548-89442567 | None:intergenic | 30.0% | |
| TGTAGTAGAATTGAATTGTG+GGG | - | chr3.2:89442480-89442499 | MS.gene42319:intron | 30.0% | |
| TGTGTAAATAAATCCAGCAT+TGG | - | chr3.2:89445966-89445985 | MS.gene42319:CDS | 30.0% | |
| TTCATGATGCAACATAGAAA+GGG | + | chr3.2:89443699-89443718 | None:intergenic | 30.0% | |
| ! | AACTATATGGTTGATGTAAC+AGG | - | chr3.2:89443988-89444007 | MS.gene42319:intron | 30.0% |
| ! | ACAGAAAAACGGAATCATTT+TGG | + | chr3.2:89443942-89443961 | None:intergenic | 30.0% |
| ! | GGTACATACTATTGGATTTT+AGG | + | chr3.2:89443148-89443167 | None:intergenic | 30.0% |
| ! | TAAATGGAACCTAGAAGTTT+TGG | - | chr3.2:89444545-89444564 | MS.gene42319:intron | 30.0% |
| ! | TCTCTTCCAATGTAATTTTG+TGG | - | chr3.2:89443795-89443814 | MS.gene42319:CDS | 30.0% |
| ! | TGGTTCATCTTTATTTGTAG+TGG | - | chr3.2:89443815-89443834 | MS.gene42319:intron | 30.0% |
| ! | TTTTATAAGACTAGAAGCCT+TGG | - | chr3.2:89443427-89443446 | MS.gene42319:CDS | 30.0% |
| !! | AAATCTGGTTTCTTTTTGTG+TGG | + | chr3.2:89444289-89444308 | None:intergenic | 30.0% |
| !! | ATACTATTGGATTTTAGGTC+AGG | + | chr3.2:89443143-89443162 | None:intergenic | 30.0% |
| !! | CTGACAGTATTACTTGTTTT+TGG | - | chr3.2:89444311-89444330 | MS.gene42319:intron | 30.0% |
| !! | TTTTGGCTAAAATATGGCAT+TGG | - | chr3.2:89445450-89445469 | MS.gene42319:intron | 30.0% |
| !!! | GTTTTGGAAGATACATTTCA+AGG | - | chr3.2:89444771-89444790 | MS.gene42319:intron | 30.0% |
| !!! | TACTTGTTTTTGGTATAGGT+TGG | - | chr3.2:89444321-89444340 | MS.gene42319:intron | 30.0% |
| !!! | TTTTTTTTTGAAATGGTCCC+TGG | - | chr3.2:89445639-89445658 | MS.gene42319:intron | 30.0% |
| AAAGAAAAGAGACCAGAAGA+AGG | + | chr3.2:89445432-89445451 | None:intergenic | 35.0% | |
| AACTCATCTTCAAATGGTAG+TGG | - | chr3.2:89442591-89442610 | MS.gene42319:intron | 35.0% | |
| AAGAGTTACTAAGAGAGTTC+AGG | - | chr3.2:89444198-89444217 | MS.gene42319:intron | 35.0% | |
| AAGGAGATGATTGACAAGAT+GGG | - | chr3.2:89444037-89444056 | MS.gene42319:intron | 35.0% | |
| AATCCAAGGAATGTGAAACT+TGG | + | chr3.2:89444495-89444514 | None:intergenic | 35.0% | |
| ACAATATATCTTTCGTGTGC+AGG | - | chr3.2:89444165-89444184 | MS.gene42319:intron | 35.0% | |
| AGATTCGAAGATATCTTTCG+AGG | + | chr3.2:89444864-89444883 | None:intergenic | 35.0% | |
| ATGAATTACCTTGCATCTGA+CGG | + | chr3.2:89444403-89444422 | None:intergenic | 35.0% | |
| ATGGGTTCATAGTCAAAATG+AGG | - | chr3.2:89443532-89443551 | MS.gene42319:intron | 35.0% | |
| CAAAACTGAGCATATTTGCA+GGG | - | chr3.2:89445780-89445799 | MS.gene42319:intron | 35.0% | |
| CAGAAAAGAAAGCGAATAAC+AGG | - | chr3.2:89445323-89445342 | MS.gene42319:intron | 35.0% | |
| CGATCCAGTTCAGTAAATAA+TGG | + | chr3.2:89444747-89444766 | None:intergenic | 35.0% | |
| CTGCCCTAAATTGATTAAGT+TGG | + | chr3.2:89445306-89445325 | None:intergenic | 35.0% | |
| GACTTATGAGTATACACAAG+GGG | + | chr3.2:89446042-89446061 | None:intergenic | 35.0% | |
| GATATAGTTCAAATTCCACC+TGG | - | chr3.2:89443320-89443339 | MS.gene42319:intron | 35.0% | |
| GGAATGAGAGTAATTGAATC+AGG | - | chr3.2:89444687-89444706 | MS.gene42319:intron | 35.0% | |
| GGGACCAACTTAATCAATTT+AGG | - | chr3.2:89445299-89445318 | MS.gene42319:intron | 35.0% | |
| GGTATAGTGGTACATACTAT+TGG | + | chr3.2:89443156-89443175 | None:intergenic | 35.0% | |
| GTAATACTGTCAGACAAATC+TGG | + | chr3.2:89444304-89444323 | None:intergenic | 35.0% | |
| TAGGAATATGCAACAGCAAA+GGG | + | chr3.2:89444086-89444105 | None:intergenic | 35.0% | |
| TATAGTTCAAATTCCACCTG+GGG | - | chr3.2:89443322-89443341 | MS.gene42319:intron | 35.0% | |
| TATCTTCGAATCTGTCTCAT+TGG | - | chr3.2:89444871-89444890 | MS.gene42319:CDS | 35.0% | |
| TGACTTATTTGCAGACCAAA+TGG | - | chr3.2:89444949-89444968 | MS.gene42319:intron | 35.0% | |
| TGGGTTCATAGTCAAAATGA+GGG | - | chr3.2:89443533-89443552 | MS.gene42319:intron | 35.0% | |
| TGTTGCATCATGAATCTCTA+TGG | - | chr3.2:89443705-89443724 | MS.gene42319:intron | 35.0% | |
| TTAGGAATATGCAACAGCAA+AGG | + | chr3.2:89444087-89444106 | None:intergenic | 35.0% | |
| TTCATAGTCAAAATGAGGGA+TGG | - | chr3.2:89443537-89443556 | MS.gene42319:intron | 35.0% | |
| TTTGGCAAATGTTGCCTAAA+TGG | - | chr3.2:89444529-89444548 | MS.gene42319:intron | 35.0% | |
| ! | AAGTATTTGGCTTACAGTGA+TGG | - | chr3.2:89444666-89444685 | MS.gene42319:intron | 35.0% |
| ! | CTTCTGGTCTCTTTTCTTTT+TGG | - | chr3.2:89445433-89445452 | MS.gene42319:intron | 35.0% |
| ! | GATTCACTGGTACAAAGTTT+TGG | - | chr3.2:89444511-89444530 | MS.gene42319:intron | 35.0% |
| ! | GGAAAGTATGAACTTTACCT+TGG | + | chr3.2:89444251-89444270 | None:intergenic | 35.0% |
| ! | GTGGTTTTTATGTGTAGTTG+AGG | - | chr3.2:89443494-89443513 | MS.gene42319:CDS | 35.0% |
| ! | TGGTTTCTTTTTGTGTGGTT+TGG | + | chr3.2:89444284-89444303 | None:intergenic | 35.0% |
| !! | TTCAAATGGTAGTGGAAGTA+TGG | - | chr3.2:89442599-89442618 | MS.gene42319:intron | 35.0% |
| AAAATCAAGTTATCGCCCAG+GGG | + | chr3.2:89443288-89443307 | None:intergenic | 40.0% | |
| AACTCCTTGGTTTCAACACA+AGG | + | chr3.2:89444979-89444998 | None:intergenic | 40.0% | |
| ACAAAATCAAGTTATCGCCC+AGG | + | chr3.2:89443290-89443309 | None:intergenic | 40.0% | |
| ACATGGCAAGAAAGGGAATT+AGG | + | chr3.2:89442531-89442550 | None:intergenic | 40.0% | |
| ACTTTGTACCAGTGAATCCA+AGG | + | chr3.2:89444509-89444528 | None:intergenic | 40.0% | |
| AGTTACTAAGAGAGTTCAGG+AGG | - | chr3.2:89444201-89444220 | MS.gene42319:intron | 40.0% | |
| ATAGTTCAAATTCCACCTGG+GGG | - | chr3.2:89443323-89443342 | MS.gene42319:intron | 40.0% | |
| ATCGAACTAACTGTAGTGTG+TGG | - | chr3.2:89442928-89442947 | MS.gene42319:intron | 40.0% | |
| ATGCTGCCAAAGTTAGCAAT+CGG | - | chr3.2:89442901-89442920 | MS.gene42319:intron | 40.0% | |
| ATTGTGTTGAAGATGGAGGA+TGG | - | chr3.2:89443630-89443649 | MS.gene42319:intron | 40.0% | |
| ATTTACTGAACTGGATCGGT+AGG | - | chr3.2:89444749-89444768 | MS.gene42319:intron | 40.0% | |
| CAAAACAGGGCATATTTGCA+GGG | - | chr3.2:89445840-89445859 | MS.gene42319:CDS | 40.0% | |
| CAAAACAGGGCATATTTGCA+GGG | + | chr3.2:89445859-89445840 | None:intergenic | 40.0% | |
| CAAAACCAGGCATATTTGCA+GGG | + | chr3.2:89445477-89445496 | None:intergenic | 40.0% | |
| CAAAACTATTACCAGCGTCT+TGG | + | chr3.2:89445047-89445066 | None:intergenic | 40.0% | |
| CAAAATCAAGTTATCGCCCA+GGG | + | chr3.2:89443289-89443308 | None:intergenic | 40.0% | |
| CAAGAGTAAACACACAGGTA+AGG | + | chr3.2:89445088-89445107 | None:intergenic | 40.0% | |
| CAGGGACTAAAACCAAAACA+GGG | - | chr3.2:89445827-89445846 | MS.gene42319:CDS | 40.0% | |
| CAGGGACTAAAACCAAAACA+GGG | + | chr3.2:89445846-89445827 | None:intergenic | 40.0% | |
| CAGGGACTAAAACCAAAACT+GGG | - | chr3.2:89445707-89445726 | MS.gene42319:intron | 40.0% | |
| CCAAAACTGAGCATATTTGC+AGG | - | chr3.2:89445779-89445798 | MS.gene42319:intron | 40.0% | |
| CTTACCTGTGTGTTTACTCT+TGG | - | chr3.2:89445086-89445105 | MS.gene42319:intron | 40.0% | |
| GAAGGAGATGATTGACAAGA+TGG | - | chr3.2:89444036-89444055 | MS.gene42319:intron | 40.0% | |
| GTGCAAAAGATTGAACTCCT+TGG | + | chr3.2:89444992-89445011 | None:intergenic | 40.0% | |
| TCAACACAAGGCTTACCATT+TGG | + | chr3.2:89444967-89444986 | None:intergenic | 40.0% | |
| TCCATCTTCAACACAATTGC+AGG | + | chr3.2:89443627-89443646 | None:intergenic | 40.0% | |
| TCCTGCAATTGTGTTGAAGA+TGG | - | chr3.2:89443623-89443642 | MS.gene42319:intron | 40.0% | |
| TCGAACTAACTGTAGTGTGT+GGG | - | chr3.2:89442929-89442948 | MS.gene42319:intron | 40.0% | |
| TGCAATTGTGTTGAAGATGG+AGG | - | chr3.2:89443626-89443645 | MS.gene42319:intron | 40.0% | |
| TGCTCAGCTATATCTTTCCA+AGG | - | chr3.2:89444231-89444250 | MS.gene42319:CDS | 40.0% | |
| TGGCCCATTATTTACTGAAC+TGG | - | chr3.2:89444740-89444759 | MS.gene42319:intron | 40.0% | |
| TTCAACACAATTGCAGGATG+TGG | + | chr3.2:89443621-89443640 | None:intergenic | 40.0% | |
| TTCACATTCCTTGGATTCAC+TGG | - | chr3.2:89444498-89444517 | MS.gene42319:intron | 40.0% | |
| TTTCCACATGCAACTTACAC+AGG | + | chr3.2:89444459-89444478 | None:intergenic | 40.0% | |
| ! | AAGTGTCTTGTTAATGGCAG+CGG | - | chr3.2:89443845-89443864 | MS.gene42319:intron | 40.0% |
| ! | AGTGTTGCTATGCCTATGAT+TGG | - | chr3.2:89442441-89442460 | MS.gene42319:CDS | 40.0% |
| ! | ATCACACCGATTGCTAACTT+TGG | + | chr3.2:89442910-89442929 | None:intergenic | 40.0% |
| ! | ATCATTTTACAATAGCCCCC+AGG | + | chr3.2:89443341-89443360 | None:intergenic | 40.0% |
| ! | CCTGCAAATATGCTCAGTTT+TGG | + | chr3.2:89445782-89445801 | None:intergenic | 40.0% |
| ! | GATGCCAAGTGTCTTGTTAA+TGG | - | chr3.2:89443839-89443858 | MS.gene42319:intron | 40.0% |
| ! | TAAGCCTTGTGTTGAAACCA+AGG | - | chr3.2:89444972-89444991 | MS.gene42319:intron | 40.0% |
| !! | GCAATGTTGATAGCATCTGA+AGG | + | chr3.2:89444381-89444400 | None:intergenic | 40.0% |
| !!! | AGGCACAATTTTTTGCAGGT+CGG | + | chr3.2:89443240-89443259 | None:intergenic | 40.0% |
| !!! | AGTGAGGCACAATTTTTTGC+AGG | + | chr3.2:89443244-89443263 | None:intergenic | 40.0% |
| !!! | CTTTTTGTGTGGTTTGGTGA+GGG | + | chr3.2:89444278-89444297 | None:intergenic | 40.0% |
| !!! | TCTTTTTGTGTGGTTTGGTG+AGG | + | chr3.2:89444279-89444298 | None:intergenic | 40.0% |
| !!! | TTTTTGTGTGGTTTGGTGAG+GGG | + | chr3.2:89444277-89444296 | None:intergenic | 40.0% |
| ACCTCCAAGAGTAAACACAC+AGG | + | chr3.2:89445093-89445112 | None:intergenic | 45.0% | |
| ACCTGTGTGTTTACTCTTGG+AGG | - | chr3.2:89445089-89445108 | MS.gene42319:intron | 45.0% | |
| ACTCCAACTCAACCTTCTTC+TGG | - | chr3.2:89445417-89445436 | MS.gene42319:intron | 45.0% | |
| AGACCAGAAGAAGGTTGAGT+TGG | + | chr3.2:89445423-89445442 | None:intergenic | 45.0% | |
| ATGATTGGACCAATCAACGC+TGG | - | chr3.2:89442456-89442475 | MS.gene42319:CDS | 45.0% | |
| ATGGTGTACTCCAGTGGTAA+TGG | - | chr3.2:89443104-89443123 | MS.gene42319:intron | 45.0% | |
| ATGTGTATGGTGTACTCCAG+TGG | - | chr3.2:89443098-89443117 | MS.gene42319:intron | 45.0% | |
| CAAAACTGGGCATATCTGCA+GGG | - | chr3.2:89445720-89445739 | MS.gene42319:intron | 45.0% | |
| CAGCCAAGTTTCACATTCCT+TGG | - | chr3.2:89444489-89444508 | MS.gene42319:intron | 45.0% | |
| CAGGGACTAAAACCAAAACC+AGG | + | chr3.2:89445490-89445509 | None:intergenic | 45.0% | |
| CCAAAACAGGGCATATTTGC+AGG | - | chr3.2:89445839-89445858 | MS.gene42319:CDS | 45.0% | |
| CCAAAACAGGGCATATTTGC+AGG | + | chr3.2:89445858-89445839 | None:intergenic | 45.0% | |
| CCAAAACCAGGCATATTTGC+AGG | + | chr3.2:89445478-89445497 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+AGG | - | chr3.2:89445706-89445725 | MS.gene42319:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+AGG | + | chr3.2:89445725-89445706 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr3.2:89445706-89445725 | MS.gene42319:intron | 45.0% | |
| GCTGCCATTAACAAGACACT+TGG | + | chr3.2:89443846-89443865 | None:intergenic | 45.0% | |
| TCACCTGTGTAAGTTGCATG+TGG | - | chr3.2:89444453-89444472 | MS.gene42319:intron | 45.0% | |
| TCAGCTTAGTGGCGAGAATA+GGG | - | chr3.2:89442961-89442980 | MS.gene42319:intron | 45.0% | |
| TGATAGCATCTGAAGGTCGA+AGG | + | chr3.2:89444374-89444393 | None:intergenic | 45.0% | |
| TGTATAGGCACCTACAACGT+TGG | + | chr3.2:89444639-89444658 | None:intergenic | 45.0% | |
| TGTGTAGTTGAGGTGAAGAG+TGG | - | chr3.2:89443504-89443523 | MS.gene42319:intron | 45.0% | |
| TTGAAGATGGAGGATGGAAC+TGG | - | chr3.2:89443636-89443655 | MS.gene42319:intron | 45.0% | |
| ! | AGAGTGTCCACGATCTGAAA+CGG | + | chr3.2:89445942-89445961 | None:intergenic | 45.0% |
| ! | ATCCAGCATTGGAATGTCGA+TGG | - | chr3.2:89445977-89445996 | MS.gene42319:CDS | 45.0% |
| ! | ATTTTACAATAGCCCCCAGG+TGG | + | chr3.2:89443338-89443357 | None:intergenic | 45.0% |
| ! | CCTGCAAATATGCCCTGTTT+TGG | - | chr3.2:89445535-89445554 | MS.gene42319:intron | 45.0% |
| ! | CCTGCAAATATGCCCTGTTT+TGG | + | chr3.2:89445554-89445535 | None:intergenic | 45.0% |
| ! | CCTGCAAATATGCCTGGTTT+TGG | - | chr3.2:89445475-89445494 | MS.gene42319:intron | 45.0% |
| ! | TAATTGGGTCTGTACTGGTG+TGG | + | chr3.2:89443014-89443033 | None:intergenic | 45.0% |
| ! | TCCAGCATTGGAATGTCGAT+GGG | - | chr3.2:89445978-89445997 | MS.gene42319:CDS | 45.0% |
| ! | TGAACTGGATCGGTAGGTTT+TGG | - | chr3.2:89444755-89444774 | MS.gene42319:intron | 45.0% |
| ! | TTTGGTTCCGTTTCAGATCG+TGG | - | chr3.2:89445932-89445951 | MS.gene42319:CDS | 45.0% |
| !! | AATAATGGGCCATCTGAACC+AGG | + | chr3.2:89444732-89444751 | None:intergenic | 45.0% |
| !! | ATAATGGGCCATCTGAACCA+GGG | + | chr3.2:89444731-89444750 | None:intergenic | 45.0% |
| !! | CTACTACAACCAGCGTTGAT+TGG | + | chr3.2:89442468-89442487 | None:intergenic | 45.0% |
| !! | GATTTTAGGTCAGGTACTCC+GGG | + | chr3.2:89443134-89443153 | None:intergenic | 45.0% |
| !! | GCGTTGATTGGTCCAATCAT+AGG | + | chr3.2:89442456-89442475 | None:intergenic | 45.0% |
| !! | GGATTTTAGGTCAGGTACTC+CGG | + | chr3.2:89443135-89443154 | None:intergenic | 45.0% |
| !!! | TGTGCCTCACTGATTTTGTG+AGG | - | chr3.2:89443253-89443272 | MS.gene42319:intron | 45.0% |
| !!! | TTTTGTGTGGTTTGGTGAGG+GGG | + | chr3.2:89444276-89444295 | None:intergenic | 45.0% |
| !!! | AAATTTTTTTTTTTTTGAAA+TGG | - | chr3.2:89445632-89445651 | MS.gene42319:intron | 5.0% |
| AAACTGTCAACTCAGTCCCC+TGG | - | chr3.2:89444711-89444730 | MS.gene42319:intron | 50.0% | |
| AACTGGTCCACCAACGTTGT+AGG | - | chr3.2:89444626-89444645 | MS.gene42319:intron | 50.0% | |
| AACTGTAGTGTGTGGGCAAG+AGG | - | chr3.2:89442936-89442955 | MS.gene42319:intron | 50.0% | |
| AGGTGAAGAGTGGAGGAGAT+GGG | - | chr3.2:89443514-89443533 | MS.gene42319:intron | 50.0% | |
| ATAGGCACCTACAACGTTGG+TGG | + | chr3.2:89444636-89444655 | None:intergenic | 50.0% | |
| CAACATTGCCGTCAGATGCA+AGG | - | chr3.2:89444392-89444411 | MS.gene42319:intron | 50.0% | |
| CAGCTTAGTGGCGAGAATAG+GGG | - | chr3.2:89442962-89442981 | MS.gene42319:intron | 50.0% | |
| CCAAAACTGGGCATATCTGC+AGG | - | chr3.2:89445719-89445738 | MS.gene42319:intron | 50.0% | |
| CTGGCCTCACAAAATCAGTG+AGG | + | chr3.2:89443260-89443279 | None:intergenic | 50.0% | |
| GCAGGATGTGGTGCATAATC+CGG | + | chr3.2:89443609-89443628 | None:intergenic | 50.0% | |
| GTAGTTGAGGTGAAGAGTGG+AGG | - | chr3.2:89443507-89443526 | MS.gene42319:intron | 50.0% | |
| GTCAGCTTAGTGGCGAGAAT+AGG | - | chr3.2:89442960-89442979 | MS.gene42319:intron | 50.0% | |
| TACACAAGGGGAGAAGCGAA+CGG | + | chr3.2:89446030-89446049 | None:intergenic | 50.0% | |
| TCCCATCGACATTCCAATGC+TGG | + | chr3.2:89445982-89446001 | None:intergenic | 50.0% | |
| TTGGTCCCTGCAAATATGCC+TGG | - | chr3.2:89445469-89445488 | MS.gene42319:intron | 50.0% | |
| ! | CCTGCAGATATGCCCAGTTT+TGG | + | chr3.2:89445722-89445741 | None:intergenic | 50.0% |
| ! | TAATGGGCCATCTGAACCAG+GGG | + | chr3.2:89444730-89444749 | None:intergenic | 50.0% |
| ! | TGTACTGGTGTGGCACAGTA+CGG | + | chr3.2:89443004-89443023 | None:intergenic | 50.0% |
| !! | ATGCAACTCTAGCTCTGTGG+AGG | - | chr3.2:89445278-89445297 | MS.gene42319:intron | 50.0% |
| !! | CTGATGCAACTCTAGCTCTG+TGG | - | chr3.2:89445275-89445294 | MS.gene42319:intron | 50.0% |
| !! | TGCAACTCTAGCTCTGTGGA+GGG | - | chr3.2:89445279-89445298 | MS.gene42319:intron | 50.0% |
| !!! | CTCACTGATTTTGTGAGGCC+AGG | - | chr3.2:89443258-89443277 | MS.gene42319:intron | 50.0% |
| AATAGGGGCGGACCTAGACT+AGG | - | chr3.2:89442977-89442996 | MS.gene42319:intron | 55.0% | |
| ACTCAGTCCCCTGGTTCAGA+TGG | - | chr3.2:89444720-89444739 | MS.gene42319:intron | 55.0% | |
| ATCAAGTTATCGCCCAGGGG+CGG | + | chr3.2:89443285-89443304 | None:intergenic | 55.0% | |
| CCCTCATGGAGGACTTCTTC+CGG | - | chr3.2:89443587-89443606 | MS.gene42319:intron | 55.0% | |
| CCGGAAGAAGTCCTCCATGA+GGG | + | chr3.2:89443590-89443609 | None:intergenic | 55.0% | |
| CTTAGTGGCGAGAATAGGGG+CGG | - | chr3.2:89442965-89442984 | MS.gene42319:intron | 55.0% | |
| GAGGTGAAGAGTGGAGGAGA+TGG | - | chr3.2:89443513-89443532 | MS.gene42319:intron | 55.0% | |
| GTCCATAACAGCCCTCATGG+AGG | - | chr3.2:89443576-89443595 | MS.gene42319:intron | 55.0% | |
| GTCCTCCATGAGGGCTGTTA+TGG | + | chr3.2:89443581-89443600 | None:intergenic | 55.0% | |
| TCCGGAAGAAGTCCTCCATG+AGG | + | chr3.2:89443591-89443610 | None:intergenic | 55.0% | |
| TGCGTCCATAACAGCCCTCA+TGG | - | chr3.2:89443573-89443592 | MS.gene42319:intron | 55.0% | |
| ! | GTACTGGTGTGGCACAGTAC+GGG | + | chr3.2:89443003-89443022 | None:intergenic | 55.0% |
| !! | GGCAAGAGGTGTCAGCTTAG+TGG | - | chr3.2:89442950-89442969 | MS.gene42319:intron | 55.0% |
| AAATGGTCCCTGTCCCCACG+TGG | + | chr3.2:89445668-89445687 | None:intergenic | 60.0% | |
| AATGGTCCCTGGCATCCACG+TGG | - | chr3.2:89445650-89445669 | MS.gene42319:intron | 60.0% | |
| ATGGTCCCTGGCATCCACGT+GGG | - | chr3.2:89445651-89445670 | MS.gene42319:intron | 60.0% | |
| GCACAGTACGGGCCTAGTCT+AGG | + | chr3.2:89442992-89443011 | None:intergenic | 60.0% | |
| !! | GAAGAGCGCTACCAAGACGC+TGG | - | chr3.2:89445033-89445052 | MS.gene42319:intron | 60.0% |
| !! | GTGTGGTTTGGTGAGGGGGA+AGG | + | chr3.2:89444272-89444291 | None:intergenic | 60.0% |
| !! | TCCAGTGGTAATGGTGCGCC+CGG | - | chr3.2:89443113-89443132 | MS.gene42319:intron | 60.0% |
| CTGGCATCCACGTGGGGACA+GGG | - | chr3.2:89445658-89445677 | MS.gene42319:intron | 65.0% | |
| CTGTCCCCACGTGGATGCCA+GGG | + | chr3.2:89445659-89445678 | None:intergenic | 65.0% | |
| TCCGGGCGCACCATTACCAC+TGG | + | chr3.2:89443117-89443136 | None:intergenic | 65.0% | |
| TGGTCCCTGGCATCCACGTG+GGG | - | chr3.2:89445652-89445671 | MS.gene42319:intron | 65.0% | |
| CCTGGCATCCACGTGGGGAC+AGG | - | chr3.2:89445657-89445676 | MS.gene42319:intron | 70.0% | |
| CCTGTCCCCACGTGGATGCC+AGG | + | chr3.2:89445660-89445679 | None:intergenic | 70.0% | |
| TTATCGCCCAGGGGCGGACC+TGG | + | chr3.2:89443279-89443298 | None:intergenic | 70.0% | |
| GTGAGGCCAGGTCCGCCCCT+GGG | - | chr3.2:89443270-89443289 | MS.gene42319:intron | 75.0% | |
| TGTGAGGCCAGGTCCGCCCC+TGG | - | chr3.2:89443269-89443288 | MS.gene42319:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 89442411 | 89446065 | 89442411 | ID=MS.gene42319 |
| chr3.2 | mRNA | 89442411 | 89446065 | 89442411 | ID=MS.gene42319.t1;Parent=MS.gene42319 |
| chr3.2 | exon | 89445798 | 89446065 | 89445798 | ID=MS.gene42319.t1.exon1;Parent=MS.gene42319.t1 |
| chr3.2 | CDS | 89445798 | 89446065 | 89445798 | ID=cds.MS.gene42319.t1;Parent=MS.gene42319.t1 |
| chr3.2 | exon | 89444795 | 89444965 | 89444795 | ID=MS.gene42319.t1.exon2;Parent=MS.gene42319.t1 |
| chr3.2 | CDS | 89444795 | 89444965 | 89444795 | ID=cds.MS.gene42319.t1;Parent=MS.gene42319.t1 |
| chr3.2 | exon | 89444592 | 89444641 | 89444592 | ID=MS.gene42319.t1.exon3;Parent=MS.gene42319.t1 |
| chr3.2 | CDS | 89444592 | 89444641 | 89444592 | ID=cds.MS.gene42319.t1;Parent=MS.gene42319.t1 |
| chr3.2 | exon | 89444410 | 89444466 | 89444410 | ID=MS.gene42319.t1.exon4;Parent=MS.gene42319.t1 |
| chr3.2 | CDS | 89444410 | 89444466 | 89444410 | ID=cds.MS.gene42319.t1;Parent=MS.gene42319.t1 |
| chr3.2 | exon | 89444224 | 89444289 | 89444224 | ID=MS.gene42319.t1.exon5;Parent=MS.gene42319.t1 |
| chr3.2 | CDS | 89444224 | 89444289 | 89444224 | ID=cds.MS.gene42319.t1;Parent=MS.gene42319.t1 |
| chr3.2 | exon | 89444063 | 89444137 | 89444063 | ID=MS.gene42319.t1.exon6;Parent=MS.gene42319.t1 |
| chr3.2 | CDS | 89444063 | 89444137 | 89444063 | ID=cds.MS.gene42319.t1;Parent=MS.gene42319.t1 |
| chr3.2 | exon | 89443710 | 89443828 | 89443710 | ID=MS.gene42319.t1.exon7;Parent=MS.gene42319.t1 |
| chr3.2 | CDS | 89443710 | 89443828 | 89443710 | ID=cds.MS.gene42319.t1;Parent=MS.gene42319.t1 |
| chr3.2 | exon | 89443422 | 89443513 | 89443422 | ID=MS.gene42319.t1.exon8;Parent=MS.gene42319.t1 |
| chr3.2 | CDS | 89443422 | 89443513 | 89443422 | ID=cds.MS.gene42319.t1;Parent=MS.gene42319.t1 |
| chr3.2 | exon | 89442411 | 89442493 | 89442411 | ID=MS.gene42319.t1.exon9;Parent=MS.gene42319.t1 |
| chr3.2 | CDS | 89442411 | 89442493 | 89442411 | ID=cds.MS.gene42319.t1;Parent=MS.gene42319.t1 |
| Gene Sequence |
| Protein sequence |
