Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050315.t1 | GAU16085.1 | 90.9 | 252 | 23 | 0 | 1 | 252 | 45 | 296 | 3.30E-113 | 417.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050315.t1 | Q9SR77 | 68.9 | 251 | 77 | 1 | 1 | 250 | 57 | 307 | 5.5e-85 | 315.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050315.t1 | G7KQV2 | 90.5 | 252 | 24 | 0 | 1 | 252 | 45 | 296 | 3.2e-110 | 407.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050315 | MS.gene051525 | 0.820686 | 6.02E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene051552 | -0.80058 | 1.35E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene051838 | 0.811051 | 8.49E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene052011 | -0.820698 | 5.98E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene052134 | 0.810019 | 1.42E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene052469 | 0.832345 | 9.97E-56 | -1.69E-46 |
| MS.gene050315 | MS.gene052589 | 0.800666 | 1.29E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene053330 | 0.841926 | 3.53E-58 | -1.69E-46 |
| MS.gene050315 | MS.gene053579 | 0.803478 | 3.42E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene054107 | 0.824131 | 9.53E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene055159 | -0.80272 | 4.91E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene055369 | 0.821804 | 3.32E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene055370 | 0.837668 | 4.54E-57 | -1.69E-46 |
| MS.gene050315 | MS.gene055539 | 0.80612 | 9.60E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene056633 | 0.819549 | 1.10E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene057124 | 0.807119 | 5.91E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene058700 | 0.803533 | 3.33E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene059420 | 0.808814 | 2.57E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene059512 | 0.812777 | 3.57E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene061345 | 0.812509 | 4.09E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene062524 | 0.800577 | 1.35E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene06260 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene063196 | 0.840892 | 6.61E-58 | -1.69E-46 |
| MS.gene050315 | MS.gene063493 | 0.820954 | 5.22E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene064688 | 0.808597 | 2.86E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene065996 | 0.821377 | 4.17E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene066406 | 0.821433 | 4.05E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene066578 | -0.819848 | 9.36E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene066845 | 0.825234 | 5.24E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene066846 | 0.825537 | 4.44E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene066847 | 0.82132 | 4.30E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene06688 | 0.819708 | 1.01E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene06756 | -0.800992 | 1.11E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene068776 | 0.810555 | 1.09E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene068820 | 0.807017 | 6.21E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene06897 | 0.814226 | 1.72E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene069261 | 0.803818 | 2.91E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene069855 | 0.801118 | 1.05E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene070956 | 0.802845 | 4.62E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene071518 | 0.804274 | 2.34E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene071993 | 0.835915 | 1.27E-56 | -1.69E-46 |
| MS.gene050315 | MS.gene072376 | -0.806949 | 6.42E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene072550 | 0.802169 | 6.37E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene07311 | 0.843481 | 1.36E-58 | -1.69E-46 |
| MS.gene050315 | MS.gene07312 | 0.826825 | 2.19E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene07939 | 0.847591 | 1.05E-59 | -1.69E-46 |
| MS.gene050315 | MS.gene08208 | 0.820434 | 6.87E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene09667 | 0.826554 | 2.55E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene20025 | 0.801071 | 1.07E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene20812 | 0.80331 | 3.71E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene20862 | 0.81797 | 2.50E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene20866 | 0.838642 | 2.55E-57 | -1.69E-46 |
| MS.gene050315 | MS.gene21182 | 0.819343 | 1.22E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene21480 | 0.847542 | 1.08E-59 | -1.69E-46 |
| MS.gene050315 | MS.gene22411 | 0.80181 | 7.55E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene23185 | -0.801956 | 7.05E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene23404 | -0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene23588 | -0.826763 | 2.27E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene24742 | 0.87601 | 1.96E-68 | -1.69E-46 |
| MS.gene050315 | MS.gene27093 | 0.830285 | 3.20E-55 | -1.69E-46 |
| MS.gene050315 | MS.gene27916 | 0.821798 | 3.33E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene30313 | 0.823406 | 1.41E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene30558 | 0.827386 | 1.61E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene33046 | -0.811762 | 5.95E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene33072 | 0.855766 | 5.06E-62 | -1.69E-46 |
| MS.gene050315 | MS.gene34225 | 0.802866 | 4.58E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene35898 | 0.8103 | 1.23E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene36337 | 0.801075 | 1.07E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene36412 | 0.808008 | 3.82E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene37584 | 0.836892 | 7.17E-57 | -1.69E-46 |
| MS.gene050315 | MS.gene38102 | -0.800012 | 1.76E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene39429 | 0.832812 | 7.63E-56 | -1.69E-46 |
| MS.gene050315 | MS.gene40650 | 0.807022 | 6.19E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene41130 | 0.826675 | 2.38E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene41649 | 0.816962 | 4.22E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene41728 | 0.802221 | 6.22E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene42319 | 0.806323 | 8.70E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene42798 | 0.841931 | 3.52E-58 | -1.69E-46 |
| MS.gene050315 | MS.gene43151 | 0.813651 | 2.30E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene44252 | 0.805347 | 1.40E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene44439 | 0.807968 | 3.90E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene44958 | -0.817464 | 3.25E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene45607 | 0.809958 | 1.46E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene47344 | 0.812553 | 4.00E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene47873 | 0.826725 | 2.32E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene48553 | 0.814065 | 1.86E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene48885 | -0.80282 | 4.68E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene48982 | -0.840013 | 1.12E-57 | -1.69E-46 |
| MS.gene050315 | MS.gene49436 | 0.867458 | 1.35E-65 | -1.69E-46 |
| MS.gene050315 | MS.gene51034 | 0.802964 | 4.37E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene52869 | 0.80162 | 8.26E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene52883 | 0.83665 | 8.26E-57 | -1.69E-46 |
| MS.gene050315 | MS.gene53510 | 0.810261 | 1.26E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene53843 | 0.802545 | 5.33E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene54795 | 0.85617 | 3.86E-62 | -1.69E-46 |
| MS.gene050315 | MS.gene55048 | 0.80492 | 1.71E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene56074 | 0.809009 | 2.34E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene56412 | 0.824214 | 9.11E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene58740 | -0.803627 | 3.18E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene59101 | 0.80502 | 1.63E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene60021 | 0.815194 | 1.05E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene60176 | 0.805766 | 1.14E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene60748 | 0.814384 | 1.58E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene61544 | 0.807259 | 5.52E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene62955 | 0.805413 | 1.35E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene64048 | 0.815309 | 9.87E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene65641 | 0.85243 | 4.64E-61 | -1.69E-46 |
| MS.gene050315 | MS.gene65965 | 0.830263 | 3.24E-55 | -1.69E-46 |
| MS.gene050315 | MS.gene66702 | 0.836657 | 8.23E-57 | -1.69E-46 |
| MS.gene050315 | MS.gene66922 | 0.842953 | 1.89E-58 | -1.69E-46 |
| MS.gene050315 | MS.gene70306 | 0.807021 | 6.20E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene71006 | 0.844772 | 6.15E-59 | -1.69E-46 |
| MS.gene050315 | MS.gene72416 | 0.827402 | 1.60E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene73446 | 0.803731 | 3.03E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene73995 | -0.802645 | 5.08E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene75346 | 0.82911 | 6.18E-55 | -1.69E-46 |
| MS.gene050315 | MS.gene75750 | 0.816623 | 5.03E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene76521 | 0.800265 | 1.56E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene77334 | 0.811436 | 7.01E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene77342 | -0.842899 | 1.95E-58 | -1.69E-46 |
| MS.gene050315 | MS.gene77877 | 0.812433 | 4.25E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene78643 | 0.804612 | 1.99E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene80172 | 0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene81254 | 0.804351 | 2.25E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene83427 | 0.826705 | 2.34E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene83429 | 0.820223 | 7.68E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene85276 | -0.8179 | 2.59E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene85919 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene86339 | 0.803009 | 4.28E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene88173 | 0.879139 | 1.59E-69 | -1.69E-46 |
| MS.gene050315 | MS.gene88577 | 0.805236 | 1.47E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene88958 | 0.806943 | 6.43E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene89074 | 0.800254 | 1.57E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene90178 | 0.8097 | 1.66E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene91098 | 0.824098 | 9.70E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene91302 | 0.817422 | 3.32E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene91401 | 0.822011 | 2.98E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene92106 | 0.836639 | 8.32E-57 | -1.69E-46 |
| MS.gene050315 | MS.gene92668 | 0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene95351 | -0.815061 | 1.12E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene95707 | 0.82371 | 1.20E-53 | -1.69E-46 |
| MS.gene050315 | MS.gene95891 | 0.800917 | 1.15E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene96111 | 0.815786 | 7.73E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene97024 | -0.801329 | 9.48E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene98065 | 0.819198 | 1.32E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene98470 | -0.800179 | 1.63E-48 | -1.69E-46 |
| MS.gene050315 | MS.gene98609 | 0.810234 | 1.28E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050315.t1 | MTR_7g104650 | 92.063 | 252 | 20 | 0 | 1 | 252 | 45 | 296 | 2.47e-171 | 474 |
| MS.gene050315.t1 | MTR_4g019130 | 38.500 | 200 | 105 | 10 | 58 | 248 | 11 | 201 | 5.24e-26 | 101 |
| MS.gene050315.t1 | MTR_2g054130 | 34.694 | 196 | 100 | 6 | 55 | 248 | 208 | 377 | 1.34e-24 | 100 |
| MS.gene050315.t1 | MTR_4g019150 | 35.610 | 205 | 107 | 10 | 57 | 248 | 10 | 202 | 3.09e-24 | 96.7 |
| MS.gene050315.t1 | MTR_2g055010 | 35.754 | 179 | 88 | 5 | 55 | 232 | 208 | 360 | 1.22e-23 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050315.t1 | AT3G10130 | 68.127 | 251 | 79 | 1 | 1 | 250 | 57 | 307 | 2.02e-120 | 346 |
| MS.gene050315.t1 | AT5G20140 | 37.755 | 196 | 95 | 7 | 55 | 248 | 203 | 373 | 2.24e-27 | 108 |
| MS.gene050315.t1 | AT5G20140 | 38.547 | 179 | 84 | 6 | 55 | 232 | 203 | 356 | 3.82e-26 | 105 |
| MS.gene050315.t1 | AT2G37970 | 36.321 | 212 | 109 | 10 | 57 | 248 | 41 | 246 | 3.31e-24 | 97.4 |
| MS.gene050315.t1 | AT1G17100 | 28.155 | 206 | 113 | 8 | 57 | 248 | 45 | 229 | 1.61e-11 | 62.8 |
Find 58 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATCTGACGGGGTTAAAA+TGG | 0.231954 | 7.2:-8256395 | MS.gene050315:CDS |
| GAAGGGACCAGTATGAAATT+AGG | 0.242932 | 7.2:-8257421 | MS.gene050315:CDS |
| CCCGTCAGATTGATTCTTAC+TGG | 0.247024 | 7.2:+8256405 | None:intergenic |
| CGTTGAAATGGAAGAGAAAA+TGG | 0.259478 | 7.2:+8254743 | None:intergenic |
| CAGTCATTTAATGTCCTTGC+CGG | 0.325460 | 7.2:-8256625 | MS.gene050315:CDS |
| GAATACAACGGAGGAGAAAA+TGG | 0.340380 | 7.2:-8256449 | MS.gene050315:CDS |
| GTATTACTACCTTACCAAAA+AGG | 0.353328 | 7.2:+8256599 | None:intergenic |
| AAGGGACCAGTATGAAATTA+GGG | 0.383324 | 7.2:-8257420 | MS.gene050315:CDS |
| AGTTCAAAGTTCTAACTAGA+AGG | 0.388608 | 7.2:-8257439 | MS.gene050315:CDS |
| CAATTTCCCTAATTTCATAC+TGG | 0.403074 | 7.2:+8257414 | None:intergenic |
| ATCTCATTACGGCGTTGAAA+TGG | 0.406251 | 7.2:+8254731 | None:intergenic |
| TAAATGATGAAGAAGTTAAG+AGG | 0.439896 | 7.2:-8254955 | MS.gene050315:CDS |
| GTAGTCTCTGCTACAAAGTA+AGG | 0.440978 | 7.2:+8256688 | None:intergenic |
| CCTCCAATGCAATCTCATTA+CGG | 0.447950 | 7.2:+8254720 | None:intergenic |
| AGGCAAGAGCACACCTGAAA+AGG | 0.455534 | 7.2:+8255500 | None:intergenic |
| TTTGTCATGCCTTCAAAGTA+CGG | 0.455727 | 7.2:-8255597 | MS.gene050315:CDS |
| CCGTAATGAGATTGCATTGG+AGG | 0.470725 | 7.2:-8254720 | MS.gene050315:CDS |
| AACTTGACAGTCTCAAGGTC+CGG | 0.485073 | 7.2:+8257458 | None:intergenic |
| AAGTTAGCACCGTACTTTGA+AGG | 0.490479 | 7.2:+8255588 | None:intergenic |
| CCAGTAAGAATCAATCTGAC+GGG | 0.498668 | 7.2:-8256405 | MS.gene050315:CDS |
| GTTGAAATGGAAGAGAAAAT+GGG | 0.501128 | 7.2:+8254744 | None:intergenic |
| TGAACGCTTCTTCGAGAGTA+CGG | 0.505095 | 7.2:+8257577 | None:intergenic |
| ATTGTCACAGAGGAATCTTT+AGG | 0.506778 | 7.2:+8255558 | None:intergenic |
| CTCGAAGAAGCGTTCATGAC+AGG | 0.512309 | 7.2:-8257570 | MS.gene050315:intron |
| GTAGCAGAGACTACAATGCC+TGG | 0.520335 | 7.2:-8256679 | MS.gene050315:CDS |
| CGGACAGTTCAAAATTAAAG+AGG | 0.529151 | 7.2:-8254897 | MS.gene050315:CDS |
| CAAAATTAAAGAGGGAACTT+CGG | 0.533590 | 7.2:-8254888 | MS.gene050315:CDS |
| AAATCGAACCCACTCTTCCC+AGG | 0.538220 | 7.2:+8256661 | None:intergenic |
| ACGCCGTAATGAGATTGCAT+TGG | 0.545636 | 7.2:-8254723 | MS.gene050315:CDS |
| GTATGAAATTAGGGAAATTG+AGG | 0.549915 | 7.2:-8257411 | MS.gene050315:intron |
| TAATGAGATTGCATTGGAGG+TGG | 0.555048 | 7.2:-8254717 | MS.gene050315:CDS |
| ACTACAATGCCTGGGAAGAG+TGG | 0.556618 | 7.2:-8256670 | MS.gene050315:CDS |
| TGCAGTCTCAGTAACGGCAT+CGG | 0.558896 | 7.2:+8257629 | None:intergenic |
| TCGAGCTTCGAATGCTGACA+TGG | 0.562557 | 7.2:+8257804 | None:intergenic |
| GTTCAAAGTTCTAACTAGAA+GGG | 0.562833 | 7.2:-8257438 | MS.gene050315:CDS |
| AAGAGTGGGTTCGATTTCAG+TGG | 0.563340 | 7.2:-8256655 | MS.gene050315:CDS |
| TTCCTCTGTGACAATTAAAG+AGG | 0.565126 | 7.2:-8255550 | MS.gene050315:CDS |
| AATACCTTTGTTGTTAACAC+GGG | 0.566075 | 7.2:+8256361 | None:intergenic |
| ACCAGTAAGAATCAATCTGA+CGG | 0.568080 | 7.2:-8256406 | MS.gene050315:CDS |
| ACAGAGGAATCTTTAGGCAG+TGG | 0.575018 | 7.2:+8255564 | None:intergenic |
| CTCTGTGACAATTAAAGAGG+TGG | 0.579625 | 7.2:-8255547 | MS.gene050315:CDS |
| CTACAATGCCTGGGAAGAGT+GGG | 0.583512 | 7.2:-8256669 | MS.gene050315:CDS |
| AACTTCGGTAGAAATTGCAC+AGG | 0.590139 | 7.2:-8254873 | MS.gene050315:intron |
| AGATTGCATTGGAGGTGGAG+TGG | 0.593319 | 7.2:-8254712 | MS.gene050315:CDS |
| TAATACCTTTGTTGTTAACA+CGG | 0.597561 | 7.2:+8256360 | None:intergenic |
| TTGAAATGGAAGAGAAAATG+GGG | 0.598136 | 7.2:+8254745 | None:intergenic |
| CTTTGAACTTGACAGTCTCA+AGG | 0.599106 | 7.2:+8257453 | None:intergenic |
| TAGCAGAGACTACAATGCCT+GGG | 0.605360 | 7.2:-8256678 | MS.gene050315:CDS |
| GGACAGTTCAAAATTAAAGA+GGG | 0.619400 | 7.2:-8254896 | MS.gene050315:CDS |
| TTTACGTCGCTGTGAGAGAG+AGG | 0.620129 | 7.2:+8257747 | None:intergenic |
| AACTCCCGTGTTAACAACAA+AGG | 0.626293 | 7.2:-8256365 | MS.gene050315:intron |
| GTACTTTGCAGTCTCAGTAA+CGG | 0.640972 | 7.2:+8257623 | None:intergenic |
| ACGTCGCTGTGAGAGAGAGG+TGG | 0.646916 | 7.2:+8257750 | None:intergenic |
| AGACTGGAGATAAAGATGAG+TGG | 0.658108 | 7.2:-8255629 | MS.gene050315:CDS |
| CAGTAAGAATCAATCTGACG+GGG | 0.666209 | 7.2:-8256404 | MS.gene050315:CDS |
| CACCTCTTTAATTGTCACAG+AGG | 0.686016 | 7.2:+8255548 | None:intergenic |
| TGAAATGGAAGAGAAAATGG+GGG | 0.710764 | 7.2:+8254746 | None:intergenic |
| TTGATGGTAGAATACAACGG+AGG | 0.744492 | 7.2:-8256458 | MS.gene050315:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATTAACATGTAATT+GGG | + | chr7.2:8256631-8256650 | None:intergenic | 10.0% |
| !! | GAAAAATACATAATTAATTT+AGG | + | chr7.2:8257501-8257520 | None:intergenic | 10.0% |
| !! | TATATATATTAACATGTAAT+TGG | + | chr7.2:8256632-8256651 | None:intergenic | 10.0% |
| !! | TTGTATATTGTTAATTATTT+CGG | - | chr7.2:8255000-8255019 | MS.gene050315:intron | 10.0% |
| !!! | ACTATAATTATTCAATATTT+TGG | - | chr7.2:8255122-8255141 | MS.gene050315:intron | 10.0% |
| !!! | ATGTTAATATATATATTTTC+TGG | - | chr7.2:8256637-8256656 | MS.gene050315:CDS | 10.0% |
| !!! | GATTTTTTTTCATAATAAAA+TGG | - | chr7.2:8256166-8256185 | MS.gene050315:intron | 10.0% |
| !! | AACTAATAAAAAACTCATAA+AGG | + | chr7.2:8255272-8255291 | None:intergenic | 15.0% |
| !! | GAATCAAATGTTTATTTAAA+TGG | - | chr7.2:8255526-8255545 | MS.gene050315:CDS | 15.0% |
| !! | TGAAAAATAAATATTAGGTT+AGG | + | chr7.2:8256321-8256340 | None:intergenic | 15.0% |
| !! | TTATAAATTCCTTTCAATTA+TGG | - | chr7.2:8256279-8256298 | MS.gene050315:intron | 15.0% |
| !!! | ATATATTGAAATAATTTTGC+TGG | + | chr7.2:8256242-8256261 | None:intergenic | 15.0% |
| !!! | ATTCTTCGTTTTTTTTATTT+TGG | + | chr7.2:8255510-8255529 | None:intergenic | 15.0% |
| !!! | TGCATTTTTAAAATTTCATT+GGG | - | chr7.2:8255949-8255968 | MS.gene050315:intron | 15.0% |
| !!! | TTTTTTTTATTTTGGAAACT+TGG | + | chr7.2:8255502-8255521 | None:intergenic | 15.0% |
| !! | AAGCCATATGAAAATAAATA+AGG | + | chr7.2:8256218-8256237 | None:intergenic | 20.0% |
| !! | AATAAAAAACTCATAAAGGA+AGG | + | chr7.2:8255268-8255287 | None:intergenic | 20.0% |
| !! | ATGACTGAATATTTAACTAA+TGG | - | chr7.2:8257122-8257141 | MS.gene050315:intron | 20.0% |
| !! | ATTCATAGGTTCTTTAAATA+TGG | - | chr7.2:8256505-8256524 | MS.gene050315:intron | 20.0% |
| !! | CACTTATAATAAGTATTTAG+AGG | + | chr7.2:8257446-8257465 | None:intergenic | 20.0% |
| !! | CTCTAAATACTTATTATAAG+TGG | - | chr7.2:8257444-8257463 | MS.gene050315:CDS | 20.0% |
| !! | GTATTGGATTATGATTATAA+AGG | - | chr7.2:8257095-8257114 | MS.gene050315:intron | 20.0% |
| !! | GTTCTTATTGAAGTTATTTA+GGG | - | chr7.2:8255651-8255670 | MS.gene050315:intron | 20.0% |
| !! | TACTAGCAATACATTATAAT+TGG | + | chr7.2:8257333-8257352 | None:intergenic | 20.0% |
| !! | TGTTCTTATTGAAGTTATTT+AGG | - | chr7.2:8255650-8255669 | MS.gene050315:intron | 20.0% |
| !! | TTGATATTGTTCTTTACTAT+AGG | - | chr7.2:8256588-8256607 | MS.gene050315:intron | 20.0% |
| !!! | AGTCCTTATTTATTTTCATA+TGG | - | chr7.2:8256212-8256231 | MS.gene050315:intron | 20.0% |
| !!! | ATACAATATACAAAGCATTA+AGG | + | chr7.2:8257025-8257044 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTTTGTTCACAAA+AGG | - | chr7.2:8255172-8255191 | MS.gene050315:intron | 20.0% |
| !!! | CAATGAAATTTTAAAAATGC+AGG | + | chr7.2:8255950-8255969 | None:intergenic | 20.0% |
| !!! | CTGCATTTTTAAAATTTCAT+TGG | - | chr7.2:8255948-8255967 | MS.gene050315:intron | 20.0% |
| !!! | TTTAGTTCTAGTATTCAATT+AGG | - | chr7.2:8256670-8256689 | MS.gene050315:CDS | 20.0% |
| ! | ACTGGTATTATTACAAAACA+TGG | + | chr7.2:8255749-8255768 | None:intergenic | 25.0% |
| ! | ATTATTGAGTGTAATTCATG+TGG | - | chr7.2:8257241-8257260 | MS.gene050315:intron | 25.0% |
| ! | ATTTCTTCATGTTCTTACTT+GGG | - | chr7.2:8255203-8255222 | MS.gene050315:intron | 25.0% |
| ! | CTGGTATTATTACAAAACAT+GGG | + | chr7.2:8255748-8255767 | None:intergenic | 25.0% |
| ! | CTTGAACTTTACATATTACT+GGG | + | chr7.2:8256531-8256550 | None:intergenic | 25.0% |
| ! | TAAATGATGAAGAAGTTAAG+AGG | - | chr7.2:8257547-8257566 | MS.gene050315:intron | 25.0% |
| ! | TAAATGATGAAGAGATAAGT+AGG | + | chr7.2:8254802-8254821 | None:intergenic | 25.0% |
| ! | TGGAAAAACTTTCATTAACT+TGG | - | chr7.2:8255582-8255601 | MS.gene050315:CDS | 25.0% |
| ! | TGGAAAAGCTTTCATTAATT+TGG | - | chr7.2:8255546-8255565 | MS.gene050315:CDS | 25.0% |
| !! | AATTTGGAGCTAATTCAAAT+TGG | - | chr7.2:8255562-8255581 | MS.gene050315:CDS | 25.0% |
| !! | ATGAATTCAAAAGACTTTTC+AGG | + | chr7.2:8256491-8256510 | None:intergenic | 25.0% |
| !! | GAAAAGTCTTTTGAATTCAT+AGG | - | chr7.2:8256491-8256510 | MS.gene050315:intron | 25.0% |
| !! | TGTTTTGTAATAATACCAGT+TGG | - | chr7.2:8255749-8255768 | MS.gene050315:intron | 25.0% |
| !!! | AACTTTAATTTGATTGAACC+TGG | + | chr7.2:8256397-8256416 | None:intergenic | 25.0% |
| !!! | AAGAGATAAGTAGGATTTTT+TGG | + | chr7.2:8254793-8254812 | None:intergenic | 25.0% |
| !!! | TAATACCTTTGTTGTTAACA+CGG | + | chr7.2:8256145-8256164 | None:intergenic | 25.0% |
| AACTACCATTTGAAGAAGAA+AGG | + | chr7.2:8257710-8257729 | None:intergenic | 30.0% | |
| AACTTCTCTCAAAAGTGAAA+GGG | + | chr7.2:8256005-8256024 | None:intergenic | 30.0% | |
| ACTACCATTTGAAGAAGAAA+GGG | + | chr7.2:8257709-8257728 | None:intergenic | 30.0% | |
| AGACAAATGATCGATTAATC+CGG | + | chr7.2:8255474-8255493 | None:intergenic | 30.0% | |
| ATCGATGTATTATCTTAGAC+TGG | - | chr7.2:8256857-8256876 | MS.gene050315:intron | 30.0% | |
| ATGTTTCCTGCAAATAGAAA+AGG | - | chr7.2:8255608-8255627 | MS.gene050315:CDS | 30.0% | |
| CAAAATTAAAGAGGGAACTT+CGG | - | chr7.2:8257614-8257633 | MS.gene050315:CDS | 30.0% | |
| CAATCAAATTAAAGTTCAGC+TGG | - | chr7.2:8256401-8256420 | MS.gene050315:CDS | 30.0% | |
| CAATTTCCCTAATTTCATAC+TGG | + | chr7.2:8255091-8255110 | None:intergenic | 30.0% | |
| CTACTAAATAACCAATGACA+GGG | + | chr7.2:8257073-8257092 | None:intergenic | 30.0% | |
| GATTTCTTCATGTTCTTACT+TGG | - | chr7.2:8255202-8255221 | MS.gene050315:intron | 30.0% | |
| GCTTGAACTTTACATATTAC+TGG | + | chr7.2:8256532-8256551 | None:intergenic | 30.0% | |
| GGACAGTTCAAAATTAAAGA+GGG | - | chr7.2:8257606-8257625 | MS.gene050315:CDS | 30.0% | |
| GTATGAAATTAGGGAAATTG+AGG | - | chr7.2:8255091-8255110 | MS.gene050315:intron | 30.0% | |
| GTATTACTACCTTACCAAAA+AGG | + | chr7.2:8255906-8255925 | None:intergenic | 30.0% | |
| GTTGAAATGGAAGAGAAAAT+GGG | + | chr7.2:8257761-8257780 | None:intergenic | 30.0% | |
| GTTTAACTGCCATAATTGAA+AGG | + | chr7.2:8256291-8256310 | None:intergenic | 30.0% | |
| TAAATCCTTAACGCAATCTA+GGG | - | chr7.2:8257653-8257672 | MS.gene050315:intron | 30.0% | |
| TAACTTCTCTCAAAAGTGAA+AGG | + | chr7.2:8256006-8256025 | None:intergenic | 30.0% | |
| TGATTCTTACTGGTAAAAAC+AGG | + | chr7.2:8256090-8256109 | None:intergenic | 30.0% | |
| TGTTTCCTGCAAATAGAAAA+GGG | - | chr7.2:8255609-8255628 | MS.gene050315:CDS | 30.0% | |
| TTAAACAACTTAAACTACCC+TGG | - | chr7.2:8256427-8256446 | MS.gene050315:CDS | 30.0% | |
| TTAAATCCTTAACGCAATCT+AGG | - | chr7.2:8257652-8257671 | MS.gene050315:intron | 30.0% | |
| TTGAAATGGAAGAGAAAATG+GGG | + | chr7.2:8257760-8257779 | None:intergenic | 30.0% | |
| ! | AGTTCAAAGTTCTAACTAGA+AGG | - | chr7.2:8255063-8255082 | MS.gene050315:intron | 30.0% |
| ! | GTTCAAAGTTCTAACTAGAA+GGG | - | chr7.2:8255064-8255083 | MS.gene050315:intron | 30.0% |
| !! | AATACCTTTGTTGTTAACAC+GGG | + | chr7.2:8256144-8256163 | None:intergenic | 30.0% |
| !! | CTTTTGATGGTAGAATACAA+CGG | - | chr7.2:8256041-8256060 | MS.gene050315:intron | 30.0% |
| !! | TGAAGTTATTTAGGGTCTTT+TGG | - | chr7.2:8255659-8255678 | MS.gene050315:intron | 30.0% |
| !!! | GTGTGTGTGTTTTATTTTTC+AGG | - | chr7.2:8257418-8257437 | MS.gene050315:CDS | 30.0% |
| AAAAATGCAGGAATGTAGCT+CGG | + | chr7.2:8255938-8255957 | None:intergenic | 35.0% | |
| AAAACAGCAACACAACTTTG+AGG | + | chr7.2:8255706-8255725 | None:intergenic | 35.0% | |
| AAACAGCAACACAACTTTGA+GGG | + | chr7.2:8255705-8255724 | None:intergenic | 35.0% | |
| AAAGACAATCAAGTCAAGGT+AGG | + | chr7.2:8255790-8255809 | None:intergenic | 35.0% | |
| AAAGACTCGATGAATCATGT+AGG | + | chr7.2:8257386-8257405 | None:intergenic | 35.0% | |
| AAATCCTTAACGCAATCTAG+GGG | - | chr7.2:8257654-8257673 | MS.gene050315:intron | 35.0% | |
| AAGGGACCAGTATGAAATTA+GGG | - | chr7.2:8255082-8255101 | MS.gene050315:intron | 35.0% | |
| ACAAATGATCGATTAATCCG+GGG | + | chr7.2:8255472-8255491 | None:intergenic | 35.0% | |
| ACCAGTAAGAATCAATCTGA+CGG | - | chr7.2:8256096-8256115 | MS.gene050315:intron | 35.0% | |
| ACTTCTCTCAAAAGTGAAAG+GGG | + | chr7.2:8256004-8256023 | None:intergenic | 35.0% | |
| AGAGAAGCCATGAAAAATGA+CGG | - | chr7.2:8257585-8257604 | MS.gene050315:CDS | 35.0% | |
| ATAATTGGACGAAGTTCATG+TGG | + | chr7.2:8257318-8257337 | None:intergenic | 35.0% | |
| ATAGAAAAGGGAGATTAGAG+AGG | - | chr7.2:8255621-8255640 | MS.gene050315:CDS | 35.0% | |
| ATCAAAAGTTTATAACCCCC+AGG | - | chr7.2:8255296-8255315 | MS.gene050315:intron | 35.0% | |
| ATTGTCACAGAGGAATCTTT+AGG | + | chr7.2:8256947-8256966 | None:intergenic | 35.0% | |
| CAAAACCTGATTCAGTACAA+AGG | + | chr7.2:8257527-8257546 | None:intergenic | 35.0% | |
| CAGCTTGACAAAATATTCCA+GGG | + | chr7.2:8256447-8256466 | None:intergenic | 35.0% | |
| CATGTAATTGGGATAGAACA+TGG | + | chr7.2:8256620-8256639 | None:intergenic | 35.0% | |
| CCTACTAAATAACCAATGAC+AGG | + | chr7.2:8257074-8257093 | None:intergenic | 35.0% | |
| CGGACAGTTCAAAATTAAAG+AGG | - | chr7.2:8257605-8257624 | MS.gene050315:CDS | 35.0% | |
| CGTTGAAATGGAAGAGAAAA+TGG | + | chr7.2:8257762-8257781 | None:intergenic | 35.0% | |
| GACAAATGATCGATTAATCC+GGG | + | chr7.2:8255473-8255492 | None:intergenic | 35.0% | |
| TAATTGGACGAAGTTCATGT+GGG | + | chr7.2:8257317-8257336 | None:intergenic | 35.0% | |
| TACCTTACCAAAAAGGTAAC+CGG | + | chr7.2:8255899-8255918 | None:intergenic | 35.0% | |
| TAGAAAAGGGAGATTAGAGA+GGG | - | chr7.2:8255622-8255641 | MS.gene050315:CDS | 35.0% | |
| TAGGAGATATTTCTTGAGCT+TGG | - | chr7.2:8256689-8256708 | MS.gene050315:CDS | 35.0% | |
| TCAAAAGTTTATAACCCCCA+GGG | - | chr7.2:8255297-8255316 | MS.gene050315:intron | 35.0% | |
| TCAGCTTGACAAAATATTCC+AGG | + | chr7.2:8256448-8256467 | None:intergenic | 35.0% | |
| TCCACATAGAGCTTTCAATT+GGG | - | chr7.2:8255419-8255438 | MS.gene050315:intron | 35.0% | |
| TGAAATGGAAGAGAAAATGG+GGG | + | chr7.2:8257759-8257778 | None:intergenic | 35.0% | |
| TGGTTATTTAGTAGGCGTAT+TGG | - | chr7.2:8257079-8257098 | MS.gene050315:intron | 35.0% | |
| TTCCTCTGTGACAATTAAAG+AGG | - | chr7.2:8256952-8256971 | MS.gene050315:intron | 35.0% | |
| TTTGAGCTTTCTTGTAGTTC+CGG | - | chr7.2:8255025-8255044 | MS.gene050315:intron | 35.0% | |
| TTTGTCATGCCTTCAAAGTA+CGG | - | chr7.2:8256905-8256924 | MS.gene050315:intron | 35.0% | |
| ! | AAATTTCATTGGGTTGCTGT+TGG | - | chr7.2:8255959-8255978 | MS.gene050315:intron | 35.0% |
| ! | AATCTCCCTTTTCTATTTGC+AGG | + | chr7.2:8255617-8255636 | None:intergenic | 35.0% |
| ! | CCTGTCATTGGTTATTTAGT+AGG | - | chr7.2:8257071-8257090 | MS.gene050315:intron | 35.0% |
| ! | GTACGGCTTTCAAATCTTTT+TGG | + | chr7.2:8254911-8254930 | None:intergenic | 35.0% |
| ! | TTTCATTTTGTCCCTGTCAT+TGG | - | chr7.2:8257059-8257078 | MS.gene050315:intron | 35.0% |
| !! | AACCACAGCAACTATTTTTC+TGG | + | chr7.2:8256981-8257000 | None:intergenic | 35.0% |
| !! | GATGTGTGTTGTTCTTTTGA+TGG | - | chr7.2:8256028-8256047 | MS.gene050315:intron | 35.0% |
| !!! | GTGTTGCTGTTTTATAATCG+AGG | - | chr7.2:8255713-8255732 | MS.gene050315:intron | 35.0% |
| AAACCAAACTTCACGAATCC+AGG | - | chr7.2:8256376-8256395 | MS.gene050315:CDS | 40.0% | |
| AACTCCCGTGTTAACAACAA+AGG | - | chr7.2:8256137-8256156 | MS.gene050315:intron | 40.0% | |
| AACTTCGGTAGAAATTGCAC+AGG | - | chr7.2:8257629-8257648 | MS.gene050315:CDS | 40.0% | |
| AAGTTAGCACCGTACTTTGA+AGG | + | chr7.2:8256917-8256936 | None:intergenic | 40.0% | |
| AATTGGACGAAGTTCATGTG+GGG | + | chr7.2:8257316-8257335 | None:intergenic | 40.0% | |
| ACCTGATTCAGTACAAAGGA+AGG | + | chr7.2:8257523-8257542 | None:intergenic | 40.0% | |
| AGACTGGAGATAAAGATGAG+TGG | - | chr7.2:8256873-8256892 | MS.gene050315:intron | 40.0% | |
| AGCACAGATAACACACAGAT+TGG | - | chr7.2:8257149-8257168 | MS.gene050315:intron | 40.0% | |
| ATTGAAAGCTCTATGTGGAC+TGG | + | chr7.2:8255418-8255437 | None:intergenic | 40.0% | |
| CAAAAGTTTATAACCCCCAG+GGG | - | chr7.2:8255298-8255317 | MS.gene050315:intron | 40.0% | |
| CAAATGATCGATTAATCCGG+GGG | + | chr7.2:8255471-8255490 | None:intergenic | 40.0% | |
| CACCTCTTTAATTGTCACAG+AGG | + | chr7.2:8256957-8256976 | None:intergenic | 40.0% | |
| CAGTAAGAATCAATCTGACG+GGG | - | chr7.2:8256098-8256117 | MS.gene050315:intron | 40.0% | |
| CAGTCATTTAATGTCCTTGC+CGG | - | chr7.2:8255877-8255896 | MS.gene050315:intron | 40.0% | |
| CCAAACTGCAAACTAATCTC+TGG | + | chr7.2:8256563-8256582 | None:intergenic | 40.0% | |
| CCAGTAAGAATCAATCTGAC+GGG | - | chr7.2:8256097-8256116 | MS.gene050315:intron | 40.0% | |
| CCTCCAATGCAATCTCATTA+CGG | + | chr7.2:8257785-8257804 | None:intergenic | 40.0% | |
| CGATCCCTTTCTTCTTCAAA+TGG | - | chr7.2:8257702-8257721 | MS.gene050315:intron | 40.0% | |
| CTCTGTGACAATTAAAGAGG+TGG | - | chr7.2:8256955-8256974 | MS.gene050315:intron | 40.0% | |
| CTGCAAAGACAATCAAGTCA+AGG | + | chr7.2:8255794-8255813 | None:intergenic | 40.0% | |
| CTTTGAACTTGACAGTCTCA+AGG | + | chr7.2:8255052-8255071 | None:intergenic | 40.0% | |
| GAAGGGACCAGTATGAAATT+AGG | - | chr7.2:8255081-8255100 | MS.gene050315:intron | 40.0% | |
| GAATACAACGGAGGAGAAAA+TGG | - | chr7.2:8256053-8256072 | MS.gene050315:intron | 40.0% | |
| GTACTTTGCAGTCTCAGTAA+CGG | + | chr7.2:8254882-8254901 | None:intergenic | 40.0% | |
| GTAGTCTCTGCTACAAAGTA+AGG | + | chr7.2:8255817-8255836 | None:intergenic | 40.0% | |
| GTCCACATAGAGCTTTCAAT+TGG | - | chr7.2:8255418-8255437 | MS.gene050315:intron | 40.0% | |
| TAATGAGATTGCATTGGAGG+TGG | - | chr7.2:8257785-8257804 | MS.gene050315:CDS | 40.0% | |
| TCAAGGTAGGTGAGATTGAT+AGG | + | chr7.2:8255777-8255796 | None:intergenic | 40.0% | |
| TCAATCTGACGGGGTTAAAA+TGG | - | chr7.2:8256107-8256126 | MS.gene050315:intron | 40.0% | |
| TCCTTCCTTTGTACTGAATC+AGG | - | chr7.2:8257519-8257538 | MS.gene050315:intron | 40.0% | |
| TGAGATTGATAGGAACCAAC+TGG | + | chr7.2:8255767-8255786 | None:intergenic | 40.0% | |
| TGTACGGCTGTAACATGTAT+AGG | - | chr7.2:8255240-8255259 | MS.gene050315:intron | 40.0% | |
| TTAACCCCTAGATTGCGTTA+AGG | + | chr7.2:8257661-8257680 | None:intergenic | 40.0% | |
| ! | ATCTCATTACGGCGTTGAAA+TGG | + | chr7.2:8257774-8257793 | None:intergenic | 40.0% |
| ! | CTTTTGGCACATTTGGATGT+GGG | - | chr7.2:8255675-8255694 | MS.gene050315:intron | 40.0% |
| ! | TCTTTTGGCACATTTGGATG+TGG | - | chr7.2:8255674-8255693 | MS.gene050315:intron | 40.0% |
| ! | TTAGGGTCTTTTGGCACATT+TGG | - | chr7.2:8255668-8255687 | MS.gene050315:intron | 40.0% |
| ! | TTGATGGTAGAATACAACGG+AGG | - | chr7.2:8256044-8256063 | MS.gene050315:intron | 40.0% |
| !! | CCAGAGATTAGTTTGCAGTT+TGG | - | chr7.2:8256560-8256579 | MS.gene050315:intron | 40.0% |
| !! | TTTCTTGAGCTTGGTGATGT+TGG | - | chr7.2:8256698-8256717 | MS.gene050315:intron | 40.0% |
| !!! | GAACTGTCCGTCATTTTTCA+TGG | + | chr7.2:8257595-8257614 | None:intergenic | 40.0% |
| AAATCCCATGGTCTACTAGC+GGG | + | chr7.2:8255446-8255465 | None:intergenic | 45.0% | |
| AACTTGACAGTCTCAAGGTC+CGG | + | chr7.2:8255047-8255066 | None:intergenic | 45.0% | |
| ACAGAGGAATCTTTAGGCAG+TGG | + | chr7.2:8256941-8256960 | None:intergenic | 45.0% | |
| ACGCCGTAATGAGATTGCAT+TGG | - | chr7.2:8257779-8257798 | MS.gene050315:CDS | 45.0% | |
| AGCAGGATTTATTGGTCCCT+AGG | + | chr7.2:8255390-8255409 | None:intergenic | 45.0% | |
| AGGTCTCTCTTCCTATTTGG+AGG | + | chr7.2:8257278-8257297 | None:intergenic | 45.0% | |
| ATCAAACCTAAGACGCTGAG+AGG | + | chr7.2:8256745-8256764 | None:intergenic | 45.0% | |
| CAAATCCCATGGTCTACTAG+CGG | + | chr7.2:8255447-8255466 | None:intergenic | 45.0% | |
| CCAAACTAGCCCATGGAAAT+TGG | + | chr7.2:8256779-8256798 | None:intergenic | 45.0% | |
| CCGTAATGAGATTGCATTGG+AGG | - | chr7.2:8257782-8257801 | MS.gene050315:CDS | 45.0% | |
| CTAGGGGTTAAACGTCTGTA+AGG | - | chr7.2:8257670-8257689 | MS.gene050315:intron | 45.0% | |
| GAACCTGGATTCGTGAAGTT+TGG | + | chr7.2:8256382-8256401 | None:intergenic | 45.0% | |
| GCCCAATTGAAAGCTCTATG+TGG | + | chr7.2:8255423-8255442 | None:intergenic | 45.0% | |
| GGACCAATAAATCCTGCTCT+GGG | - | chr7.2:8255392-8255411 | MS.gene050315:intron | 45.0% | |
| GGCCAGAAAAATAGTTGCTG+TGG | - | chr7.2:8256976-8256995 | MS.gene050315:intron | 45.0% | |
| GTCTTAGGTTTGATTCTCCC+CGG | - | chr7.2:8256751-8256770 | MS.gene050315:intron | 45.0% | |
| TAAGAAGCCAAACTAGCCCA+TGG | + | chr7.2:8256786-8256805 | None:intergenic | 45.0% | |
| TACCAAAAAGGTAACCGGCA+AGG | + | chr7.2:8255894-8255913 | None:intergenic | 45.0% | |
| TAGCAGAGACTACAATGCCT+GGG | - | chr7.2:8255824-8255843 | MS.gene050315:intron | 45.0% | |
| TCTCAGGTTCGAATCTCCTA+GGG | - | chr7.2:8255371-8255390 | MS.gene050315:intron | 45.0% | |
| TGAACGCTTCTTCGAGAGTA+CGG | + | chr7.2:8254928-8254947 | None:intergenic | 45.0% | |
| TGCAGGTCTCTCTTCCTATT+TGG | + | chr7.2:8257281-8257300 | None:intergenic | 45.0% | |
| TGTTACAGCCGTACACTTAC+AGG | + | chr7.2:8255235-8255254 | None:intergenic | 45.0% | |
| ! | AAGAGTGGGTTCGATTTCAG+TGG | - | chr7.2:8255847-8255866 | MS.gene050315:intron | 45.0% |
| ! | CCCGTCAGATTGATTCTTAC+TGG | + | chr7.2:8256100-8256119 | None:intergenic | 45.0% |
| ! | CTGTTGGTTGCTGCATATCT+TGG | - | chr7.2:8255975-8255994 | MS.gene050315:intron | 45.0% |
| ! | GTTGCTGTGGTTTCCTTTTC+AGG | - | chr7.2:8256989-8257008 | MS.gene050315:intron | 45.0% |
| !! | CCAATTTCCATGGGCTAGTT+TGG | - | chr7.2:8256776-8256795 | MS.gene050315:intron | 45.0% |
| !! | GAGCTTGGTGATGTTGGTTT+GGG | - | chr7.2:8256704-8256723 | MS.gene050315:intron | 45.0% |
| !! | TGAGCTTGGTGATGTTGGTT+TGG | - | chr7.2:8256703-8256722 | MS.gene050315:intron | 45.0% |
| !! | TGCCGGTTACCTTTTTGGTA+AGG | - | chr7.2:8255894-8255913 | MS.gene050315:intron | 45.0% |
| !! | ATTATTGAAAAATAAATATT+AGG | + | chr7.2:8256326-8256345 | None:intergenic | 5.0% |
| AAATCGAACCCACTCTTCCC+AGG | + | chr7.2:8255844-8255863 | None:intergenic | 50.0% | |
| AATCCCATGGTCTACTAGCG+GGG | + | chr7.2:8255445-8255464 | None:intergenic | 50.0% | |
| ACTACAATGCCTGGGAAGAG+TGG | - | chr7.2:8255832-8255851 | MS.gene050315:intron | 50.0% | |
| AGATTGCATTGGAGGTGGAG+TGG | - | chr7.2:8257790-8257809 | MS.gene050315:CDS | 50.0% | |
| AGTTTATAACCCCCAGGGGT+CGG | - | chr7.2:8255302-8255321 | MS.gene050315:intron | 50.0% | |
| CCATGTGCGAACCTCCAAAT+AGG | - | chr7.2:8257264-8257283 | MS.gene050315:intron | 50.0% | |
| CCTATTTGGAGGTTCGCACA+TGG | + | chr7.2:8257267-8257286 | None:intergenic | 50.0% | |
| CTACAATGCCTGGGAAGAGT+GGG | - | chr7.2:8255833-8255852 | MS.gene050315:intron | 50.0% | |
| CTAGGATGTGCTCATGTCTC+AGG | - | chr7.2:8255355-8255374 | MS.gene050315:intron | 50.0% | |
| CTGAGACATGAGCACATCCT+AGG | + | chr7.2:8255357-8255376 | None:intergenic | 50.0% | |
| GGCATGTGCCTGTAAGTGTA+CGG | - | chr7.2:8255224-8255243 | MS.gene050315:intron | 50.0% | |
| GGGACCAATAAATCCTGCTC+TGG | - | chr7.2:8255391-8255410 | MS.gene050315:intron | 50.0% | |
| GGTCTCAAGTCTTCACCACA+AGG | + | chr7.2:8255336-8255355 | None:intergenic | 50.0% | |
| GTAGCAGAGACTACAATGCC+TGG | - | chr7.2:8255823-8255842 | MS.gene050315:intron | 50.0% | |
| GTCTCAGGTTCGAATCTCCT+AGG | - | chr7.2:8255370-8255389 | MS.gene050315:intron | 50.0% | |
| GTGGTGAAGACTTGAGACCT+AGG | - | chr7.2:8255337-8255356 | MS.gene050315:intron | 50.0% | |
| TAGCCCATGGAAATTGGCAC+CGG | + | chr7.2:8256773-8256792 | None:intergenic | 50.0% | |
| TGCAGTCTCAGTAACGGCAT+CGG | + | chr7.2:8254876-8254895 | None:intergenic | 50.0% | |
| TGGCCCAGAGCAGGATTTAT+TGG | + | chr7.2:8255398-8255417 | None:intergenic | 50.0% | |
| TTTACGTCGCTGTGAGAGAG+AGG | + | chr7.2:8254758-8254777 | None:intergenic | 50.0% | |
| ! | AGGCAAGAGCACACCTGAAA+AGG | + | chr7.2:8257005-8257024 | None:intergenic | 50.0% |
| !! | CTCGAAGAAGCGTTCATGAC+AGG | - | chr7.2:8254932-8254951 | MS.gene050315:CDS | 50.0% |
| !! | GTCCTTGCCGGTTACCTTTT+TGG | - | chr7.2:8255889-8255908 | MS.gene050315:intron | 50.0% |
| AATCCGGGGGACAAATCCCA+TGG | + | chr7.2:8255458-8255477 | None:intergenic | 55.0% | |
| AGACCATGGGATTTGTCCCC+CGG | - | chr7.2:8255452-8255471 | MS.gene050315:intron | 55.0% | |
| AGCCCATGGAAATTGGCACC+GGG | + | chr7.2:8256772-8256791 | None:intergenic | 55.0% | |
| TGGGGCTCACTGAATCATGC+AGG | + | chr7.2:8257298-8257317 | None:intergenic | 55.0% | |
| ! | TCCCCGGTGCCAATTTCCAT+GGG | - | chr7.2:8256767-8256786 | MS.gene050315:intron | 55.0% |
| ACGTCGCTGTGAGAGAGAGG+TGG | + | chr7.2:8254755-8254774 | None:intergenic | 60.0% | |
| GCCCATGGAAATTGGCACCG+GGG | + | chr7.2:8256771-8256790 | None:intergenic | 60.0% | |
| TATAACCCCCAGGGGTCGGT+TGG | - | chr7.2:8255306-8255325 | MS.gene050315:intron | 60.0% | |
| TGCGCTCCTCTCAGCGTCTT+AGG | - | chr7.2:8256736-8256755 | MS.gene050315:intron | 60.0% | |
| ! | CTCCCCGGTGCCAATTTCCA+TGG | - | chr7.2:8256766-8256785 | MS.gene050315:intron | 60.0% |
| !! | TATGTGGACTGGCCCAGAGC+AGG | + | chr7.2:8255407-8255426 | None:intergenic | 60.0% |
| AAGGCCAACCAACCGACCCC+TGG | + | chr7.2:8255317-8255336 | None:intergenic | 65.0% | |
| AGGCCAACCAACCGACCCCT+GGG | + | chr7.2:8255316-8255335 | None:intergenic | 65.0% | |
| GGGCCCCGCTAGTAGACCAT+GGG | - | chr7.2:8255439-8255458 | MS.gene050315:intron | 65.0% | |
| TGGGCCCCGCTAGTAGACCA+TGG | - | chr7.2:8255438-8255457 | MS.gene050315:intron | 65.0% | |
| ! | GCTGAGAGGAGCGCACTGCA+AGG | + | chr7.2:8256731-8256750 | None:intergenic | 65.0% |
| !! | GGGTCGGTTGGTTGGCCTTG+TGG | - | chr7.2:8255318-8255337 | MS.gene050315:intron | 65.0% |
| ACCCCCAGGGGTCGGTTGGT+TGG | - | chr7.2:8255310-8255329 | MS.gene050315:intron | 70.0% | |
| GCCAACCAACCGACCCCTGG+GGG | + | chr7.2:8255314-8255333 | None:intergenic | 70.0% | |
| GGCCAACCAACCGACCCCTG+GGG | + | chr7.2:8255315-8255334 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 8254700 | 8257824 | 8254700 | ID=MS.gene050315 |
| chr7.2 | mRNA | 8254700 | 8257824 | 8254700 | ID=MS.gene050315.t1;Parent=MS.gene050315 |
| chr7.2 | exon | 8257752 | 8257824 | 8257752 | ID=MS.gene050315.t1.exon1;Parent=MS.gene050315.t1 |
| chr7.2 | CDS | 8257752 | 8257824 | 8257752 | ID=cds.MS.gene050315.t1;Parent=MS.gene050315.t1 |
| chr7.2 | exon | 8257571 | 8257657 | 8257571 | ID=MS.gene050315.t1.exon2;Parent=MS.gene050315.t1 |
| chr7.2 | CDS | 8257571 | 8257657 | 8257571 | ID=cds.MS.gene050315.t1;Parent=MS.gene050315.t1 |
| chr7.2 | exon | 8257412 | 8257482 | 8257412 | ID=MS.gene050315.t1.exon3;Parent=MS.gene050315.t1 |
| chr7.2 | CDS | 8257412 | 8257482 | 8257412 | ID=cds.MS.gene050315.t1;Parent=MS.gene050315.t1 |
| chr7.2 | exon | 8256609 | 8256710 | 8256609 | ID=MS.gene050315.t1.exon4;Parent=MS.gene050315.t1 |
| chr7.2 | CDS | 8256609 | 8256710 | 8256609 | ID=cds.MS.gene050315.t1;Parent=MS.gene050315.t1 |
| chr7.2 | exon | 8256366 | 8256470 | 8256366 | ID=MS.gene050315.t1.exon5;Parent=MS.gene050315.t1 |
| chr7.2 | CDS | 8256366 | 8256470 | 8256366 | ID=cds.MS.gene050315.t1;Parent=MS.gene050315.t1 |
| chr7.2 | exon | 8255514 | 8255649 | 8255514 | ID=MS.gene050315.t1.exon6;Parent=MS.gene050315.t1 |
| chr7.2 | CDS | 8255514 | 8255649 | 8255514 | ID=cds.MS.gene050315.t1;Parent=MS.gene050315.t1 |
| chr7.2 | exon | 8254874 | 8254983 | 8254874 | ID=MS.gene050315.t1.exon7;Parent=MS.gene050315.t1 |
| chr7.2 | CDS | 8254874 | 8254983 | 8254874 | ID=cds.MS.gene050315.t1;Parent=MS.gene050315.t1 |
| chr7.2 | exon | 8254700 | 8254774 | 8254700 | ID=MS.gene050315.t1.exon8;Parent=MS.gene050315.t1 |
| chr7.2 | CDS | 8254700 | 8254774 | 8254700 | ID=cds.MS.gene050315.t1;Parent=MS.gene050315.t1 |
| Gene Sequence |
| Protein sequence |
