Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42348.t1 | XP_013462112.1 | 95.1 | 284 | 13 | 1 | 1 | 284 | 1 | 283 | 2.20E-121 | 445.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42348.t1 | Q9ZU65 | 63.5 | 63 | 23 | 0 | 202 | 264 | 229 | 291 | 8.9e-15 | 82.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42348.t1 | A0A072V2Q5 | 95.1 | 284 | 13 | 1 | 1 | 284 | 1 | 283 | 1.6e-121 | 445.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene42348.t1 | TF | OFP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049281 | MS.gene42348 | 0.806091 | 9.73E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene42348 | -0.807373 | 5.22E-50 | -1.69E-46 |
| MS.gene054959 | MS.gene42348 | 0.803328 | 3.67E-49 | -1.69E-46 |
| MS.gene055776 | MS.gene42348 | -0.800477 | 1.41E-48 | -1.69E-46 |
| MS.gene055942 | MS.gene42348 | 0.828917 | 6.89E-55 | -1.69E-46 |
| MS.gene058628 | MS.gene42348 | 0.814533 | 1.47E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene42348 | -0.806616 | 7.54E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene42348 | -0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene42348 | -0.808681 | 2.75E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42348.t1 | MTR_3g111780 | 95.070 | 284 | 13 | 1 | 1 | 284 | 1 | 283 | 0.0 | 502 |
| MS.gene42348.t1 | MTR_8g103520 | 51.389 | 72 | 35 | 0 | 193 | 264 | 218 | 289 | 1.41e-20 | 89.4 |
| MS.gene42348.t1 | MTR_0907s0020 | 54.545 | 66 | 30 | 0 | 199 | 264 | 102 | 167 | 1.21e-19 | 84.7 |
| MS.gene42348.t1 | MTR_5g075210 | 43.000 | 100 | 57 | 0 | 164 | 263 | 245 | 344 | 4.79e-19 | 86.3 |
| MS.gene42348.t1 | MTR_7g072875 | 32.468 | 154 | 80 | 2 | 129 | 260 | 129 | 280 | 2.63e-18 | 83.2 |
| MS.gene42348.t1 | MTR_7g105790 | 53.623 | 69 | 32 | 0 | 202 | 270 | 113 | 181 | 5.87e-18 | 80.5 |
| MS.gene42348.t1 | MTR_4g052040 | 46.835 | 79 | 42 | 0 | 186 | 264 | 86 | 164 | 1.86e-17 | 78.6 |
| MS.gene42348.t1 | MTR_7g072630 | 26.829 | 287 | 155 | 8 | 27 | 260 | 58 | 342 | 4.57e-17 | 80.5 |
| MS.gene42348.t1 | MTR_5g079710 | 50.725 | 69 | 34 | 0 | 196 | 264 | 88 | 156 | 5.15e-17 | 79.0 |
| MS.gene42348.t1 | MTR_8g087530 | 47.692 | 65 | 34 | 0 | 199 | 263 | 258 | 322 | 6.80e-16 | 77.0 |
| MS.gene42348.t1 | MTR_2g018030 | 46.774 | 62 | 33 | 0 | 199 | 260 | 277 | 338 | 9.90e-16 | 76.6 |
| MS.gene42348.t1 | MTR_4g028930 | 50.820 | 61 | 30 | 0 | 200 | 260 | 315 | 375 | 6.48e-15 | 74.3 |
| MS.gene42348.t1 | MTR_4g052060 | 51.667 | 60 | 29 | 0 | 205 | 264 | 99 | 158 | 1.96e-13 | 67.8 |
| MS.gene42348.t1 | MTR_1g111640 | 45.161 | 62 | 34 | 0 | 198 | 259 | 136 | 197 | 3.70e-11 | 62.4 |
| MS.gene42348.t1 | MTR_4g132740 | 37.500 | 88 | 44 | 1 | 178 | 265 | 71 | 147 | 5.82e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42348.t1 | AT5G19650 | 62.121 | 66 | 25 | 0 | 199 | 264 | 154 | 219 | 7.56e-23 | 94.4 |
| MS.gene42348.t1 | AT2G18500 | 61.538 | 65 | 25 | 0 | 199 | 263 | 226 | 290 | 2.81e-20 | 89.0 |
| MS.gene42348.t1 | AT2G30400 | 50.000 | 70 | 35 | 0 | 194 | 263 | 247 | 316 | 1.73e-18 | 84.3 |
| MS.gene42348.t1 | AT3G52525 | 56.452 | 62 | 27 | 0 | 200 | 261 | 67 | 128 | 7.01e-18 | 79.3 |
| MS.gene42348.t1 | AT5G58360 | 53.731 | 67 | 31 | 0 | 197 | 263 | 222 | 288 | 2.31e-17 | 80.9 |
| MS.gene42348.t1 | AT2G36026 | 55.000 | 60 | 27 | 0 | 205 | 264 | 92 | 151 | 5.31e-17 | 77.4 |
| MS.gene42348.t1 | AT1G06920 | 33.010 | 103 | 64 | 1 | 167 | 264 | 206 | 308 | 4.42e-16 | 77.4 |
| MS.gene42348.t1 | AT5G01840 | 48.529 | 68 | 35 | 0 | 203 | 270 | 202 | 269 | 4.05e-15 | 73.9 |
| MS.gene42348.t1 | AT5G22240 | 44.118 | 68 | 38 | 0 | 196 | 263 | 93 | 160 | 1.22e-13 | 68.6 |
| MS.gene42348.t1 | AT4G18830 | 45.902 | 61 | 33 | 0 | 199 | 259 | 282 | 342 | 8.22e-12 | 65.1 |
Find 67 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGCAGGGCCTGGATTCC+CGG | 0.272464 | 3.2:+89241673 | None:intergenic |
| CTCAAATTATAGTGATAAAA+AGG | 0.274257 | 3.2:-89241369 | MS.gene42348:CDS |
| GGTCCATTCTTCTAGTACTA+TGG | 0.311039 | 3.2:-89241414 | MS.gene42348:CDS |
| GACACATTGCATTGGTGTTC+CGG | 0.326318 | 3.2:+89241584 | None:intergenic |
| TGCGAGCTTTCATGGAGATT+TGG | 0.332540 | 3.2:-89240992 | MS.gene42348:CDS |
| AGTAATTGTGCGAGCTTTCA+TGG | 0.344864 | 3.2:-89241000 | MS.gene42348:CDS |
| CACCGGAGAAAGACGGTATA+TGG | 0.359937 | 3.2:+89241655 | None:intergenic |
| TCCTCTTTCCCCGGGAATCC+AGG | 0.367021 | 3.2:-89241683 | MS.gene42348:CDS |
| TTTGGCAACAAATGTTCGTT+TGG | 0.381425 | 3.2:-89240974 | MS.gene42348:CDS |
| GGCGACGAAGCAGGAAGGTT+TGG | 0.382600 | 3.2:+89241605 | None:intergenic |
| TTATCACTATAATTTGAGAT+AGG | 0.385663 | 3.2:+89241374 | None:intergenic |
| ATACCCTATGTCATATGCTT+TGG | 0.387292 | 3.2:+89241628 | None:intergenic |
| GGTAAAAGAAAGCTTTGCTT+TGG | 0.392617 | 3.2:-89241162 | MS.gene42348:CDS |
| AGTGAGGTTTCAAAGTATTA+CGG | 0.405418 | 3.2:-89241285 | MS.gene42348:CDS |
| ATTTAACTAGCTCGAATAGA+AGG | 0.424510 | 3.2:-89241337 | MS.gene42348:CDS |
| AATGACCTTTCCTCTTTCCC+CGG | 0.427656 | 3.2:-89241692 | MS.gene42348:CDS |
| ACTTGACATAACCTTCGTTT+CGG | 0.428668 | 3.2:+89241199 | None:intergenic |
| GATGTCCGAGGCCAAGGACT+TGG | 0.437700 | 3.2:-89241072 | MS.gene42348:CDS |
| ATGGCAGGGCCTGGATTCCC+GGG | 0.439698 | 3.2:+89241674 | None:intergenic |
| GTTAGAGATGATAGAAGAGA+TGG | 0.441612 | 3.2:-89241096 | MS.gene42348:CDS |
| TTCTTGCTTAGCAAGATTCT+CGG | 0.449560 | 3.2:-89241447 | MS.gene42348:CDS |
| GAAGGTTATGTCAAGTAGAA+TGG | 0.463702 | 3.2:-89241192 | MS.gene42348:CDS |
| GAAGGTTATGTCAAGTAGAA+TGG | 0.463702 | 3.2:-89241240 | MS.gene42348:CDS |
| CTATGGATAGTACTAAAGTT+AGG | 0.470027 | 3.2:-89241397 | MS.gene42348:CDS |
| TGAAGAAGGTTGAGAGAGTG+AGG | 0.472397 | 3.2:-89241301 | MS.gene42348:CDS |
| CAATAGTTGCTCCAAGTCCT+TGG | 0.478606 | 3.2:+89241061 | None:intergenic |
| TCAAACAAATGTTCAAACTA+AGG | 0.481359 | 3.2:-89240928 | MS.gene42348:CDS |
| GGGGAAAGAGGAAAGGTCAT+TGG | 0.484366 | 3.2:+89241694 | None:intergenic |
| AGACGGTATATGGCAGGGCC+TGG | 0.484707 | 3.2:+89241665 | None:intergenic |
| ACTAGAAGAATGGACCTTCT+CGG | 0.488884 | 3.2:+89241421 | None:intergenic |
| GCCTGGATTCCCGGGGAAAG+AGG | 0.494617 | 3.2:+89241682 | None:intergenic |
| TATCCATAGTACTAGAAGAA+TGG | 0.495158 | 3.2:+89241411 | None:intergenic |
| AGAAACTCACTTCTTCTTGA+GGG | 0.501729 | 3.2:+89241509 | None:intergenic |
| TGGTGTTCCGGCGACGAAGC+AGG | 0.502249 | 3.2:+89241596 | None:intergenic |
| GACGATAAGTCGTGTGAAGA+AGG | 0.503045 | 3.2:-89241315 | MS.gene42348:CDS |
| GATGGAGATGTCCGAGGCCA+AGG | 0.503048 | 3.2:-89241078 | MS.gene42348:CDS |
| TGCCATATACCGTCTTTCTC+CGG | 0.503136 | 3.2:-89241657 | MS.gene42348:CDS |
| GAGCGACACATTTGAAAAGA+AGG | 0.503682 | 3.2:+89241716 | None:intergenic |
| GTCAAGTAGAATGGAGGAGA+AGG | 0.514162 | 3.2:-89241183 | MS.gene42348:CDS |
| AAACCTTCCTGCTTCGTCGC+CGG | 0.514759 | 3.2:-89241603 | MS.gene42348:CDS |
| TTGCTCCAAGTCCTTGGCCT+CGG | 0.515968 | 3.2:+89241067 | None:intergenic |
| AGCGACACATTTGAAAAGAA+GGG | 0.522344 | 3.2:+89241717 | None:intergenic |
| ATGACCTTTCCTCTTTCCCC+GGG | 0.522963 | 3.2:-89241691 | MS.gene42348:CDS |
| GGAGAAAGACGGTATATGGC+AGG | 0.531009 | 3.2:+89241659 | None:intergenic |
| TAGAAACTCACTTCTTCTTG+AGG | 0.531127 | 3.2:+89241508 | None:intergenic |
| TCATATGCTTTGGAGTTCAC+CGG | 0.541099 | 3.2:+89241638 | None:intergenic |
| CTAAATTCTAGAGATTATCA+TGG | 0.544872 | 3.2:-89241023 | MS.gene42348:CDS |
| GATTTCTTGAAGTCTTCGTA+AGG | 0.562850 | 3.2:+89241122 | None:intergenic |
| AATTGATAAAATCAATGAAG+AGG | 0.573253 | 3.2:-89241486 | MS.gene42348:CDS |
| AAGATTCTCGGAAGCCGAGA+AGG | 0.578226 | 3.2:-89241435 | MS.gene42348:CDS |
| AACTCCAAAGCATATGACAT+AGG | 0.582440 | 3.2:-89241632 | MS.gene42348:CDS |
| TCTTCTTGAGGGAACGTCGG+AGG | 0.601171 | 3.2:+89241520 | None:intergenic |
| ACTCCAAAGCATATGACATA+GGG | 0.601832 | 3.2:-89241631 | MS.gene42348:CDS |
| TCGAAGAGGAACCGAAACGA+AGG | 0.602284 | 3.2:-89241210 | MS.gene42348:CDS |
| ATTAAGAAAGTGAAATCCAA+AGG | 0.608408 | 3.2:-89241554 | MS.gene42348:CDS |
| TGGAGTTCACCGGAGAAAGA+CGG | 0.608559 | 3.2:+89241648 | None:intergenic |
| TCTTTGATGACACATTGCAT+TGG | 0.617252 | 3.2:+89241576 | None:intergenic |
| GTTCCGGCGACGAAGCAGGA+AGG | 0.630275 | 3.2:+89241600 | None:intergenic |
| GATTCCCGGGGAAAGAGGAA+AGG | 0.637825 | 3.2:+89241687 | None:intergenic |
| GAGAAAGACGGTATATGGCA+GGG | 0.639308 | 3.2:+89241660 | None:intergenic |
| ACTTCTTCTTGAGGGAACGT+CGG | 0.649804 | 3.2:+89241517 | None:intergenic |
| AGTATTACGGAGAATCAAAG+AGG | 0.650942 | 3.2:-89241272 | MS.gene42348:CDS |
| TGGCAGGGCCTGGATTCCCG+GGG | 0.653477 | 3.2:+89241675 | None:intergenic |
| GGTTATGTCAAGTAGAATGG+AGG | 0.656874 | 3.2:-89241189 | MS.gene42348:CDS |
| AGAATGGAAGAGAATCGAAG+AGG | 0.657497 | 3.2:-89241224 | MS.gene42348:CDS |
| TCAAAGAGGAAAAGAAACGA+AGG | 0.672215 | 3.2:-89241258 | MS.gene42348:CDS |
| AGAAGAGATGGAGATGTCCG+AGG | 0.675634 | 3.2:-89241084 | MS.gene42348:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATAAAATCAATGAAG+AGG | - | chr3.2:89241177-89241196 | MS.gene42348:CDS | 20.0% |
| !! | CTCAAATTATAGTGATAAAA+AGG | - | chr3.2:89241294-89241313 | MS.gene42348:CDS | 20.0% |
| !!! | TTATCACTATAATTTGAGAT+AGG | + | chr3.2:89241292-89241311 | None:intergenic | 20.0% |
| ! | ATTAAGAAAGTGAAATCCAA+AGG | - | chr3.2:89241109-89241128 | MS.gene42348:CDS | 25.0% |
| ! | TCAAACAAATGTTCAAACTA+AGG | - | chr3.2:89241735-89241754 | MS.gene42348:CDS | 25.0% |
| !! | CTAAATTCTAGAGATTATCA+TGG | - | chr3.2:89241640-89241659 | MS.gene42348:CDS | 25.0% |
| !!! | TGAAGATTTTTTACTGACTT+AGG | + | chr3.2:89241718-89241737 | None:intergenic | 25.0% |
| ATTTAACTAGCTCGAATAGA+AGG | - | chr3.2:89241326-89241345 | MS.gene42348:CDS | 30.0% | |
| CTATGGATAGTACTAAAGTT+AGG | - | chr3.2:89241266-89241285 | MS.gene42348:CDS | 30.0% | |
| TATCCATAGTACTAGAAGAA+TGG | + | chr3.2:89241255-89241274 | None:intergenic | 30.0% | |
| ! | AGTGAGGTTTCAAAGTATTA+CGG | - | chr3.2:89241378-89241397 | MS.gene42348:CDS | 30.0% |
| AACTCCAAAGCATATGACAT+AGG | - | chr3.2:89241031-89241050 | MS.gene42348:CDS | 35.0% | |
| ACTCCAAAGCATATGACATA+GGG | - | chr3.2:89241032-89241051 | MS.gene42348:CDS | 35.0% | |
| ACTTGACATAACCTTCGTTT+CGG | + | chr3.2:89241419-89241438 | None:intergenic | 35.0% | |
| AGAAACTCACTTCTTCTTGA+GGG | + | chr3.2:89241157-89241176 | None:intergenic | 35.0% | |
| AGCGACACATTTGAAAAGAA+GGG | + | chr3.2:89240949-89240968 | None:intergenic | 35.0% | |
| AGTATTACGGAGAATCAAAG+AGG | - | chr3.2:89241391-89241410 | MS.gene42348:CDS | 35.0% | |
| ATACCCTATGTCATATGCTT+TGG | + | chr3.2:89241038-89241057 | None:intergenic | 35.0% | |
| GAAGGTTATGTCAAGTAGAA+TGG | - | chr3.2:89241423-89241442 | MS.gene42348:CDS | 35.0% | |
| GATTTCTTGAAGTCTTCGTA+AGG | + | chr3.2:89241544-89241563 | None:intergenic | 35.0% | |
| GGTAAAAGAAAGCTTTGCTT+TGG | - | chr3.2:89241501-89241520 | MS.gene42348:CDS | 35.0% | |
| GTTAGAGATGATAGAAGAGA+TGG | - | chr3.2:89241567-89241586 | MS.gene42348:CDS | 35.0% | |
| TAGAAACTCACTTCTTCTTG+AGG | + | chr3.2:89241158-89241177 | None:intergenic | 35.0% | |
| TCAAAGAGGAAAAGAAACGA+AGG | - | chr3.2:89241405-89241424 | MS.gene42348:CDS | 35.0% | |
| TGCTTTGGTGAAAAAGTCAA+AGG | - | chr3.2:89241516-89241535 | MS.gene42348:CDS | 35.0% | |
| TTCTTGCTTAGCAAGATTCT+CGG | - | chr3.2:89241216-89241235 | MS.gene42348:CDS | 35.0% | |
| TTTGGCAACAAATGTTCGTT+TGG | - | chr3.2:89241689-89241708 | MS.gene42348:CDS | 35.0% | |
| ! | TCTTTGATGACACATTGCAT+TGG | + | chr3.2:89241090-89241109 | None:intergenic | 35.0% |
| !!! | GCAACTATTGCAGTGTTTTT+TGG | - | chr3.2:89241615-89241634 | MS.gene42348:CDS | 35.0% |
| ACTAGAAGAATGGACCTTCT+CGG | + | chr3.2:89241245-89241264 | None:intergenic | 40.0% | |
| AGAATGGAAGAGAATCGAAG+AGG | - | chr3.2:89241439-89241458 | MS.gene42348:CDS | 40.0% | |
| AGTAATTGTGCGAGCTTTCA+TGG | - | chr3.2:89241663-89241682 | MS.gene42348:CDS | 40.0% | |
| GAGCGACACATTTGAAAAGA+AGG | + | chr3.2:89240950-89240969 | None:intergenic | 40.0% | |
| GGTCCATTCTTCTAGTACTA+TGG | - | chr3.2:89241249-89241268 | MS.gene42348:CDS | 40.0% | |
| GGTTATGTCAAGTAGAATGG+AGG | - | chr3.2:89241426-89241445 | MS.gene42348:CDS | 40.0% | |
| !! | TCATATGCTTTGGAGTTCAC+CGG | + | chr3.2:89241028-89241047 | None:intergenic | 40.0% |
| AATGACCTTTCCTCTTTCCC+CGG | - | chr3.2:89240971-89240990 | MS.gene42348:CDS | 45.0% | |
| ACTTCTTCTTGAGGGAACGT+CGG | + | chr3.2:89241149-89241168 | None:intergenic | 45.0% | |
| CAATAGTTGCTCCAAGTCCT+TGG | + | chr3.2:89241605-89241624 | None:intergenic | 45.0% | |
| GACGATAAGTCGTGTGAAGA+AGG | - | chr3.2:89241348-89241367 | MS.gene42348:CDS | 45.0% | |
| GAGAAAGACGGTATATGGCA+GGG | + | chr3.2:89241006-89241025 | None:intergenic | 45.0% | |
| GTCAAGTAGAATGGAGGAGA+AGG | - | chr3.2:89241480-89241499 | MS.gene42348:CDS | 45.0% | |
| TGAAGAAGGTTGAGAGAGTG+AGG | - | chr3.2:89241362-89241381 | MS.gene42348:CDS | 45.0% | |
| TGCCATATACCGTCTTTCTC+CGG | - | chr3.2:89241006-89241025 | MS.gene42348:CDS | 45.0% | |
| TGCGAGCTTTCATGGAGATT+TGG | - | chr3.2:89241671-89241690 | MS.gene42348:CDS | 45.0% | |
| ! | GACACATTGCATTGGTGTTC+CGG | + | chr3.2:89241082-89241101 | None:intergenic | 45.0% |
| AAGATTCTCGGAAGCCGAGA+AGG | - | chr3.2:89241228-89241247 | MS.gene42348:CDS | 50.0% | |
| AGAAGAGATGGAGATGTCCG+AGG | - | chr3.2:89241579-89241598 | MS.gene42348:CDS | 50.0% | |
| ATGACCTTTCCTCTTTCCCC+GGG | - | chr3.2:89240972-89240991 | MS.gene42348:CDS | 50.0% | |
| CACCGGAGAAAGACGGTATA+TGG | + | chr3.2:89241011-89241030 | None:intergenic | 50.0% | |
| GGAGAAAGACGGTATATGGC+AGG | + | chr3.2:89241007-89241026 | None:intergenic | 50.0% | |
| GGGGAAAGAGGAAAGGTCAT+TGG | + | chr3.2:89240972-89240991 | None:intergenic | 50.0% | |
| TCGAAGAGGAACCGAAACGA+AGG | - | chr3.2:89241453-89241472 | MS.gene42348:CDS | 50.0% | |
| TGGAGTTCACCGGAGAAAGA+CGG | + | chr3.2:89241018-89241037 | None:intergenic | 50.0% | |
| AAACCTTCCTGCTTCGTCGC+CGG | - | chr3.2:89241060-89241079 | MS.gene42348:CDS | 55.0% | |
| GATTCCCGGGGAAAGAGGAA+AGG | + | chr3.2:89240979-89240998 | None:intergenic | 55.0% | |
| TCTTCTTGAGGGAACGTCGG+AGG | + | chr3.2:89241146-89241165 | None:intergenic | 55.0% | |
| TTGCTCCAAGTCCTTGGCCT+CGG | + | chr3.2:89241599-89241618 | None:intergenic | 55.0% | |
| !!! | GAACGTCGGAGGTGCTTTTG+CGG | + | chr3.2:89241135-89241154 | None:intergenic | 55.0% |
| AGACGGTATATGGCAGGGCC+TGG | + | chr3.2:89241001-89241020 | None:intergenic | 60.0% | |
| GATGGAGATGTCCGAGGCCA+AGG | - | chr3.2:89241585-89241604 | MS.gene42348:CDS | 60.0% | |
| GATGTCCGAGGCCAAGGACT+TGG | - | chr3.2:89241591-89241610 | MS.gene42348:CDS | 60.0% | |
| GGCGACGAAGCAGGAAGGTT+TGG | + | chr3.2:89241061-89241080 | None:intergenic | 60.0% | |
| TATGGCAGGGCCTGGATTCC+CGG | + | chr3.2:89240993-89241012 | None:intergenic | 60.0% | |
| TCCTCTTTCCCCGGGAATCC+AGG | - | chr3.2:89240980-89240999 | MS.gene42348:CDS | 60.0% | |
| !!! | GGAGGTGCTTTTGCGGCCTT+TGG | + | chr3.2:89241128-89241147 | None:intergenic | 60.0% |
| ATGGCAGGGCCTGGATTCCC+GGG | + | chr3.2:89240992-89241011 | None:intergenic | 65.0% | |
| GCCTGGATTCCCGGGGAAAG+AGG | + | chr3.2:89240984-89241003 | None:intergenic | 65.0% | |
| GTTCCGGCGACGAAGCAGGA+AGG | + | chr3.2:89241066-89241085 | None:intergenic | 65.0% | |
| TGGTGTTCCGGCGACGAAGC+AGG | + | chr3.2:89241070-89241089 | None:intergenic | 65.0% | |
| TGGCAGGGCCTGGATTCCCG+GGG | + | chr3.2:89240991-89241010 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 89240914 | 89241771 | 89240914 | ID=MS.gene42348 |
| chr3.2 | mRNA | 89240914 | 89241771 | 89240914 | ID=MS.gene42348.t1;Parent=MS.gene42348 |
| chr3.2 | exon | 89240914 | 89241771 | 89240914 | ID=MS.gene42348.t1.exon1;Parent=MS.gene42348.t1 |
| chr3.2 | CDS | 89240914 | 89241771 | 89240914 | ID=cds.MS.gene42348.t1;Parent=MS.gene42348.t1 |
| Gene Sequence |
| Protein sequence |
