Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44227.t1 | XP_024629212.1 | 96.8 | 1018 | 33 | 0 | 1 | 1018 | 1 | 1018 | 0.00E+00 | 2001.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44227.t1 | C0HJB3 | 78.0 | 987 | 209 | 3 | 33 | 1018 | 2 | 981 | 0.0e+00 | 1580.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44227.t1 | G7LB83 | 96.8 | 1018 | 33 | 0 | 1 | 1018 | 1 | 1018 | 0.0e+00 | 2001.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73391 | MS.gene44227 | PPI |
| MS.gene033714 | MS.gene44227 | PPI |
| MS.gene065392 | MS.gene44227 | PPI |
| MS.gene033712 | MS.gene44227 | PPI |
| MS.gene024279 | MS.gene44227 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44227.t1 | MTR_8g075330 | 96.758 | 1018 | 33 | 0 | 1 | 1018 | 1 | 1018 | 0.0 | 2055 |
| MS.gene44227.t1 | MTR_7g084030 | 60.159 | 1009 | 387 | 7 | 15 | 1018 | 53 | 1051 | 0.0 | 1260 |
| MS.gene44227.t1 | MTR_7g084040 | 58.893 | 1012 | 397 | 6 | 15 | 1018 | 7 | 1007 | 0.0 | 1251 |
| MS.gene44227.t1 | MTR_3g098650 | 60.861 | 999 | 373 | 10 | 29 | 1018 | 25 | 1014 | 0.0 | 1250 |
| MS.gene44227.t1 | MTR_7g084030 | 61.615 | 805 | 304 | 3 | 15 | 818 | 8 | 808 | 0.0 | 1051 |
| MS.gene44227.t1 | MTR_6g008850 | 29.535 | 860 | 488 | 29 | 44 | 827 | 138 | 955 | 2.27e-90 | 313 |
| MS.gene44227.t1 | MTR_4g071680 | 28.372 | 860 | 485 | 31 | 44 | 827 | 138 | 942 | 2.00e-78 | 279 |
| MS.gene44227.t1 | MTR_3g013720 | 67.347 | 49 | 16 | 0 | 56 | 104 | 11 | 59 | 2.42e-17 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44227.t1 | AT5G66150 | 66.369 | 1008 | 315 | 4 | 30 | 1018 | 32 | 1034 | 0.0 | 1388 |
| MS.gene44227.t1 | AT5G66150 | 66.303 | 1009 | 315 | 5 | 30 | 1018 | 32 | 1035 | 0.0 | 1384 |
| MS.gene44227.t1 | AT3G26720 | 59.190 | 1012 | 401 | 5 | 9 | 1018 | 2 | 1003 | 0.0 | 1246 |
| MS.gene44227.t1 | AT5G13980 | 58.777 | 1014 | 398 | 8 | 15 | 1018 | 7 | 1010 | 0.0 | 1205 |
| MS.gene44227.t1 | AT5G13980 | 58.777 | 1014 | 398 | 8 | 15 | 1018 | 7 | 1010 | 0.0 | 1205 |
| MS.gene44227.t1 | AT3G26720 | 58.934 | 957 | 385 | 3 | 9 | 965 | 2 | 950 | 0.0 | 1184 |
| MS.gene44227.t1 | AT3G26720 | 59.345 | 947 | 377 | 3 | 9 | 955 | 2 | 940 | 0.0 | 1180 |
| MS.gene44227.t1 | AT3G26720 | 59.243 | 925 | 369 | 3 | 9 | 933 | 2 | 918 | 0.0 | 1151 |
| MS.gene44227.t1 | AT3G26720 | 59.243 | 925 | 369 | 3 | 9 | 933 | 2 | 918 | 0.0 | 1150 |
| MS.gene44227.t1 | AT5G13980 | 59.676 | 925 | 357 | 6 | 15 | 933 | 7 | 921 | 0.0 | 1128 |
| MS.gene44227.t1 | AT5G66150 | 63.539 | 746 | 247 | 5 | 293 | 1018 | 1 | 741 | 0.0 | 965 |
| MS.gene44227.t1 | AT5G14950 | 29.466 | 862 | 493 | 27 | 42 | 827 | 150 | 972 | 9.16e-91 | 315 |
Find 237 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACATGTTCTTGTGTTTC+TGG | 0.051560 | 8.1:+31791421 | None:intergenic |
| ATTATATGTAAAGGCCTATT+TGG | 0.105844 | 8.1:-31787070 | MS.gene44227:CDS |
| TAGTGACTTTGTTCCCTTAC+AGG | 0.152498 | 8.1:-31789300 | MS.gene44227:intron |
| AATTTACTCACCAATCTTAT+TGG | 0.170296 | 8.1:-31784770 | MS.gene44227:CDS |
| AATCCGAACATATCGCTTTA+AGG | 0.183139 | 8.1:+31788313 | None:intergenic |
| AGAAATCACTTGAAGTTATT+TGG | 0.183366 | 8.1:-31789418 | MS.gene44227:CDS |
| TGAAACAGAAGCCAATATTT+TGG | 0.183888 | 8.1:+31787027 | None:intergenic |
| GATTCTAAGTGGATACTATT+TGG | 0.198412 | 8.1:-31788294 | MS.gene44227:intron |
| ATGATTGACCAAACAACTTT+AGG | 0.232196 | 8.1:-31790987 | MS.gene44227:CDS |
| CTAAAGTAGCTTTGCTGAAT+TGG | 0.234744 | 8.1:+31786617 | None:intergenic |
| TTCATCAGAAGTTTAATTCT+TGG | 0.244314 | 8.1:-31786165 | MS.gene44227:CDS |
| TTAGGAGGCAAGCTGTAATT+TGG | 0.255269 | 8.1:+31784584 | None:intergenic |
| TTGATCAGAAAGCAGAAAAT+TGG | 0.263725 | 8.1:-31784643 | MS.gene44227:intron |
| CACCCATTGTCCACATGATA+TGG | 0.273078 | 8.1:+31788817 | None:intergenic |
| AATGACATCTTTAAATTTCC+CGG | 0.289249 | 8.1:+31786795 | None:intergenic |
| ACCGGGGCTGGTATTGTTAA+AGG | 0.290654 | 8.1:-31791948 | MS.gene44227:CDS |
| GGTTGGCAGATTGATCCTTT+TGG | 0.295379 | 8.1:-31790921 | MS.gene44227:CDS |
| ATTGATCCACTATGTTAATA+AGG | 0.300775 | 8.1:-31788745 | MS.gene44227:intron |
| AGCTGAAGAACCAAATGTTT+TGG | 0.302866 | 8.1:+31789388 | None:intergenic |
| GTTTCCACTTGATAGGTATA+AGG | 0.307766 | 8.1:-31786875 | MS.gene44227:intron |
| TCTCAAGTTCCTGACCTTAG+AGG | 0.308074 | 8.1:+31788000 | None:intergenic |
| TGATTGACCAAACAACTTTA+GGG | 0.316065 | 8.1:-31790986 | MS.gene44227:CDS |
| CGAAACAAGCCCCAAAATAT+TGG | 0.320257 | 8.1:-31787038 | MS.gene44227:CDS |
| CACGAGGGGTTGTATTAAAT+TGG | 0.322682 | 8.1:+31790946 | None:intergenic |
| TTTCGGATGCAATCCCAAAT+AGG | 0.327950 | 8.1:+31787056 | None:intergenic |
| TCGACTTTAGATGATACTTT+TGG | 0.328452 | 8.1:-31788124 | MS.gene44227:CDS |
| GCAAACACAAACTTTCTGTT+TGG | 0.329089 | 8.1:+31791662 | None:intergenic |
| GAAGTTTCTTACTCCAGTTT+TGG | 0.329536 | 8.1:+31786734 | None:intergenic |
| CAATTCAGCAAAGCTACTTT+AGG | 0.330227 | 8.1:-31786616 | MS.gene44227:CDS |
| AGCAGTTGTTAGCTCTTCTT+TGG | 0.334571 | 8.1:-31787879 | MS.gene44227:CDS |
| TGGCTCCAACAATTCCATTC+AGG | 0.334713 | 8.1:-31791850 | MS.gene44227:intron |
| TCTTATTCTACATAGGTTAG+AGG | 0.335448 | 8.1:-31784859 | MS.gene44227:intron |
| TTTAGGGCATCGCTTTATAA+AGG | 0.337081 | 8.1:-31790970 | MS.gene44227:CDS |
| CGGATGTATAATTCCAAAAC+TGG | 0.343864 | 8.1:-31786747 | MS.gene44227:CDS |
| CACTTCACCGTCTTTGATGC+TGG | 0.350461 | 8.1:+31785191 | None:intergenic |
| CACAAGAATGACAGCAAATA+TGG | 0.350745 | 8.1:-31785785 | MS.gene44227:CDS |
| TTGGCATTGGTGTAAATAGA+TGG | 0.353346 | 8.1:+31788528 | None:intergenic |
| TTATCTGTCCAGCTCAATCT+TGG | 0.357436 | 8.1:-31785276 | MS.gene44227:intron |
| CATTCCACAGGCTAAAGATT+TGG | 0.365954 | 8.1:-31787544 | MS.gene44227:intron |
| GAAGTCAGAAATGAAGAAAA+TGG | 0.366126 | 8.1:-31783983 | MS.gene44227:CDS |
| TTATATGTAAAGGCCTATTT+GGG | 0.366264 | 8.1:-31787069 | MS.gene44227:CDS |
| GAGCACTTACTTCATTTCTA+AGG | 0.367741 | 8.1:-31786980 | MS.gene44227:CDS |
| GTCTTTGATGCTGGCTCCAC+CGG | 0.369918 | 8.1:+31785200 | None:intergenic |
| TCTTCATTTCTGACTTCTCT+TGG | 0.370190 | 8.1:+31783989 | None:intergenic |
| TGGATCCATGAGAGTTCCTT+TGG | 0.376062 | 8.1:+31784604 | None:intergenic |
| GAATATTGAGCATCTTCATT+TGG | 0.378827 | 8.1:+31784181 | None:intergenic |
| TATGCGAAACGGTTGGCTAT+TGG | 0.379907 | 8.1:-31788025 | MS.gene44227:CDS |
| ATCTAAAGTCGATCTCTTAC+CGG | 0.380760 | 8.1:+31788135 | None:intergenic |
| ACTCCATCATCGGTAGGAAT+TGG | 0.386672 | 8.1:+31785823 | None:intergenic |
| GTCATCAGTTGTATGTTGTT+TGG | 0.389959 | 8.1:+31788048 | None:intergenic |
| TGGCGTGCCTCCAAAACATT+TGG | 0.391529 | 8.1:-31789398 | MS.gene44227:CDS |
| GTTAGAGGAAATTACTATAT+CGG | 0.403159 | 8.1:-31784844 | MS.gene44227:CDS |
| TACTGGTATTCTGACTATAT+CGG | 0.408684 | 8.1:+31787264 | None:intergenic |
| ACTGATCTTGAAATAATAGT+TGG | 0.409663 | 8.1:+31786435 | None:intergenic |
| GCGGTTCAAGGTTACCTACT+TGG | 0.411448 | 8.1:-31790891 | MS.gene44227:CDS |
| TTTGGACACTCTGCGGTTCA+AGG | 0.413813 | 8.1:-31790903 | MS.gene44227:CDS |
| TGGAATTGTTCTTCTCCGTT+TGG | 0.414621 | 8.1:-31784458 | MS.gene44227:CDS |
| AGAGTTATCAAGGCAACATT+AGG | 0.415243 | 8.1:+31784566 | None:intergenic |
| TACTTCATTTCTAAGGCAGC+TGG | 0.419682 | 8.1:-31786973 | MS.gene44227:CDS |
| TGATATGCAGGTTCCCTTCA+AGG | 0.420654 | 8.1:-31786215 | MS.gene44227:intron |
| AACCATATCATGTGGACAAT+GGG | 0.425505 | 8.1:-31788819 | MS.gene44227:CDS |
| TCACGCTGGCGTCGTACAAC+TGG | 0.425773 | 8.1:-31784799 | MS.gene44227:CDS |
| CTGATGGAGCAAATGCATAT+TGG | 0.425917 | 8.1:-31788361 | MS.gene44227:CDS |
| GTTGGCTATTGGAGCCTCTA+AGG | 0.425962 | 8.1:-31788014 | MS.gene44227:intron |
| TTTCTTTGTTGGAACCTGTA+AGG | 0.426076 | 8.1:+31789286 | None:intergenic |
| AAAGTTTGTGTTTGCAGAGA+TGG | 0.431473 | 8.1:-31791654 | MS.gene44227:intron |
| TGAACCAAGACTCTGCATAT+TGG | 0.432026 | 8.1:+31788781 | None:intergenic |
| CCGTTTGGCACATCTATATG+AGG | 0.432117 | 8.1:-31784443 | MS.gene44227:intron |
| TATCTGTCCAGCTCAATCTT+GGG | 0.432754 | 8.1:-31785275 | MS.gene44227:intron |
| AGCGATGCCCTAAAGTTGTT+TGG | 0.434754 | 8.1:+31790979 | None:intergenic |
| AAGTGGAATTGATGCTTCAT+AGG | 0.440066 | 8.1:-31785173 | MS.gene44227:intron |
| TGATTTCTTCTGTAGGCATC+TGG | 0.440675 | 8.1:-31786489 | MS.gene44227:intron |
| CAGTGGCCACAACTGGTTTG+CGG | 0.443170 | 8.1:+31788500 | None:intergenic |
| ATTTCTAAGGCAGCTGGAAA+AGG | 0.447449 | 8.1:-31786967 | MS.gene44227:intron |
| TGACACAGGTTCGAGATCAT+AGG | 0.448933 | 8.1:-31785632 | MS.gene44227:intron |
| CCCTTACCTTATTAACATAG+TGG | 0.452700 | 8.1:+31788739 | None:intergenic |
| GACAAGAACCTCAAGCAGTA+AGG | 0.456135 | 8.1:-31783936 | MS.gene44227:CDS |
| TTGATAGGTATAAGGAGAAA+AGG | 0.463996 | 8.1:-31786867 | MS.gene44227:intron |
| GGATAGTAGTTTCCTGCTAC+AGG | 0.464263 | 8.1:+31785582 | None:intergenic |
| TGTGTAAAAGCCAATAAGAT+TGG | 0.464385 | 8.1:+31784760 | None:intergenic |
| TGTTGTTGAGCTTGGTCCTA+TGG | 0.466620 | 8.1:-31783887 | MS.gene44227:CDS |
| GAAAATGATTATAACCTGAA+TGG | 0.467764 | 8.1:+31791836 | None:intergenic |
| TTTAAGAAAATTATATGTAA+AGG | 0.468019 | 8.1:-31787079 | MS.gene44227:CDS |
| TGTGGAGCACTATAATGAAC+AGG | 0.475976 | 8.1:+31789344 | None:intergenic |
| TTCTGTTTGGATCCTTCTGA+AGG | 0.477706 | 8.1:+31791675 | None:intergenic |
| TATAACCTGAATGGAATTGT+TGG | 0.477992 | 8.1:+31791845 | None:intergenic |
| ATATACCTCAAGAGTTATCA+AGG | 0.478631 | 8.1:+31784556 | None:intergenic |
| TTCTTTGTTGGAACCTGTAA+GGG | 0.480045 | 8.1:+31789287 | None:intergenic |
| AGGAAAATTGAACGTTCACT+TGG | 0.480310 | 8.1:-31791928 | MS.gene44227:CDS |
| AAGACTCTGCATATTGGTAC+TGG | 0.486443 | 8.1:+31788787 | None:intergenic |
| TTTGACACGTTGTTCAACAT+TGG | 0.488889 | 8.1:+31789160 | None:intergenic |
| TTTGGCCTTGGAGATGCTCT+AGG | 0.491156 | 8.1:-31788106 | MS.gene44227:CDS |
| CAGCAAAGCTACTTTAGGTA+TGG | 0.493274 | 8.1:-31786611 | MS.gene44227:CDS |
| TGTGGAATGCTGTCTTCTGT+TGG | 0.496724 | 8.1:+31787558 | None:intergenic |
| TCCTTTAACAATACCAGCCC+CGG | 0.500351 | 8.1:+31791947 | None:intergenic |
| AAAGTTACTCAGCCTGTAGC+AGG | 0.503072 | 8.1:-31785594 | MS.gene44227:CDS |
| CGGTCCACGAATTACCTTGA+AGG | 0.503409 | 8.1:+31786201 | None:intergenic |
| CAACCTCTGGACAACTCAAA+CGG | 0.503583 | 8.1:-31786767 | MS.gene44227:CDS |
| AGAGTCTTGGTTCAAGCAAA+TGG | 0.505251 | 8.1:-31788772 | MS.gene44227:CDS |
| AAAATGGCATGGAAGGTTGA+AGG | 0.505845 | 8.1:-31783967 | MS.gene44227:CDS |
| TCTCACCATTCTTACTGTTG+AGG | 0.506377 | 8.1:+31786832 | None:intergenic |
| GGAATGCTGTCTTCTGTTGG+AGG | 0.506724 | 8.1:+31787561 | None:intergenic |
| ACAAAGTACAACACCGGGGC+TGG | 0.507473 | 8.1:-31791960 | MS.gene44227:CDS |
| AGGACGACGGTAGAGGAGTA+GGG | 0.510321 | 8.1:-31785056 | MS.gene44227:CDS |
| GGGTGATGAAACTGATTCTC+AGG | 0.511037 | 8.1:-31786579 | MS.gene44227:intron |
| GAGGACGACGGTAGAGGAGT+AGG | 0.514200 | 8.1:-31785057 | MS.gene44227:CDS |
| GGTCCAATTCCTACCGATGA+TGG | 0.517548 | 8.1:-31785826 | MS.gene44227:CDS |
| GTCTTAGTTGATCGTGCCAC+CGG | 0.517920 | 8.1:-31785219 | MS.gene44227:CDS |
| AGTACCAATATGCAGAGTCT+TGG | 0.519215 | 8.1:-31788785 | MS.gene44227:CDS |
| CGGCCTTAAAGCGATATGTT+CGG | 0.520755 | 8.1:-31788316 | MS.gene44227:CDS |
| GAGAACATTGACATCGGACC+GGG | 0.521614 | 8.1:-31786813 | MS.gene44227:CDS |
| GTTCCCTTCAAGGTAATTCG+TGG | 0.521780 | 8.1:-31786205 | MS.gene44227:CDS |
| TCTTACTGTTGAGGTGTGAG+AGG | 0.523199 | 8.1:+31786841 | None:intergenic |
| TTTAATACAACCCCTCGTGC+TGG | 0.525147 | 8.1:-31790942 | MS.gene44227:CDS |
| GAACATATCGCTTTAAGGCC+GGG | 0.527144 | 8.1:+31788318 | None:intergenic |
| GCAGATAAAAGAGTTGAAAG+AGG | 0.528239 | 8.1:-31784028 | MS.gene44227:intron |
| CTTTAGGTATGGCTCTAGTG+AGG | 0.529620 | 8.1:-31786600 | MS.gene44227:CDS |
| ACTGTTGATCAATACTATGT+TGG | 0.529854 | 8.1:-31791870 | MS.gene44227:CDS |
| ACAAGAACCTCAAGCAGTAA+GGG | 0.535520 | 8.1:-31783935 | MS.gene44227:CDS |
| GGAGCAAATGCATATTGGAC+AGG | 0.535924 | 8.1:-31788356 | MS.gene44227:CDS |
| TCACACCTCAACAGTAAGAA+TGG | 0.536175 | 8.1:-31786837 | MS.gene44227:CDS |
| AATGAAGAAAATGGCATGGA+AGG | 0.536544 | 8.1:-31783974 | MS.gene44227:CDS |
| TAAGCCAACCAACATCATCA+TGG | 0.537764 | 8.1:+31791895 | None:intergenic |
| AGTTCCTTTGGTTAAATGAG+AGG | 0.539673 | 8.1:+31784616 | None:intergenic |
| TAACGTTGAAGTACAGTATG+TGG | 0.540411 | 8.1:-31787124 | MS.gene44227:CDS |
| TATCGGTACGATTCCATCCA+AGG | 0.540459 | 8.1:+31787281 | None:intergenic |
| ATAGTTGGAGAGGATTCCCT+TGG | 0.541021 | 8.1:+31786450 | None:intergenic |
| GTTTAATTCTTGGATTTACC+AGG | 0.541252 | 8.1:-31786155 | MS.gene44227:intron |
| TTTAACCAAAGGAACTCTCA+TGG | 0.542454 | 8.1:-31784609 | MS.gene44227:CDS |
| TTCGAGATCATAGGGAAGAC+TGG | 0.542554 | 8.1:-31785623 | MS.gene44227:CDS |
| ACAGGCTGAGTAACTTTAAG+TGG | 0.544000 | 8.1:+31785600 | None:intergenic |
| TTGATCGAGGACGACGGTAG+AGG | 0.546178 | 8.1:-31785063 | MS.gene44227:CDS |
| TGTCTTGCTAGTAAGAAATC+CGG | 0.547021 | 8.1:-31787854 | MS.gene44227:CDS |
| GACACAGGTTCGAGATCATA+GGG | 0.547449 | 8.1:-31785631 | MS.gene44227:intron |
| CGAACATATCGCTTTAAGGC+CGG | 0.548372 | 8.1:+31788317 | None:intergenic |
| TTTGATGCTGGCTCCACCGG+TGG | 0.551526 | 8.1:+31785203 | None:intergenic |
| ATAATGAACAGGAAAAGTAT+TGG | 0.552749 | 8.1:+31789355 | None:intergenic |
| TGAACCGCAGAGTGTCCAAA+AGG | 0.554538 | 8.1:+31790906 | None:intergenic |
| TATATCGGAATCCACAATGT+TGG | 0.555924 | 8.1:-31784829 | MS.gene44227:CDS |
| ATCGGTACGATTCCATCCAA+GGG | 0.556443 | 8.1:+31787282 | None:intergenic |
| GATAAGAATAGTACATGTGA+TGG | 0.557055 | 8.1:-31784997 | MS.gene44227:CDS |
| CTTGTGGTGAAAGATTCATC+TGG | 0.558232 | 8.1:-31787150 | MS.gene44227:CDS |
| CAGCACCATGATGCTGTGAC+TGG | 0.559394 | 8.1:-31788076 | MS.gene44227:CDS |
| GGAATCCACAATGTTGGAGC+TGG | 0.559577 | 8.1:-31784823 | MS.gene44227:CDS |
| TGTTGCCTTGATAACTCTTG+AGG | 0.559803 | 8.1:-31784561 | MS.gene44227:intron |
| AAATGGCATGGAAGGTTGAA+GGG | 0.560769 | 8.1:-31783966 | MS.gene44227:CDS |
| AAACCATATCATGTGGACAA+TGG | 0.561179 | 8.1:-31788820 | MS.gene44227:CDS |
| CAATCTTGGGATTTATACAA+AGG | 0.564764 | 8.1:-31785262 | MS.gene44227:CDS |
| ACAAAATCTGAAGTGCTGAC+AGG | 0.566375 | 8.1:+31783907 | None:intergenic |
| CCACACTCCCATGATGATGT+TGG | 0.566834 | 8.1:-31791903 | MS.gene44227:CDS |
| CGATGATGGAGTAGGAAAAG+AGG | 0.568194 | 8.1:-31785812 | MS.gene44227:CDS |
| TGTCAATACCTCCACTCGGA+TGG | 0.568278 | 8.1:-31787002 | MS.gene44227:CDS |
| GTGCATATATATTCCGCCCA+AGG | 0.568614 | 8.1:-31786467 | MS.gene44227:CDS |
| CGATATGTTCGGATTCTAAG+TGG | 0.570160 | 8.1:-31788305 | MS.gene44227:CDS |
| CAACTGATGACTATGCGAAA+CGG | 0.570786 | 8.1:-31788036 | MS.gene44227:CDS |
| AAAATGCCGCAAACCAGTTG+TGG | 0.570790 | 8.1:-31788506 | MS.gene44227:CDS |
| AGCAAATATGGTCACAAACA+AGG | 0.571309 | 8.1:-31785773 | MS.gene44227:CDS |
| ATTTCTCATAGGTATGCTGA+TGG | 0.571547 | 8.1:-31788377 | MS.gene44227:intron |
| CAGAAATGAAGAAAATGGCA+TGG | 0.572073 | 8.1:-31783978 | MS.gene44227:CDS |
| CTACTTAAGGCGCTTGATCG+AGG | 0.572312 | 8.1:-31785076 | MS.gene44227:intron |
| CAGTGCCAGTCACAGCATCA+TGG | 0.573116 | 8.1:+31788071 | None:intergenic |
| GGACTACCCCTTACTGCTTG+AGG | 0.573385 | 8.1:+31783928 | None:intergenic |
| TTTGTTCTACCCACCATCGA+TGG | 0.574017 | 8.1:+31791446 | None:intergenic |
| TCTGTTTGGATCCTTCTGAA+GGG | 0.574391 | 8.1:+31791676 | None:intergenic |
| CATACACAAAGTACAACACC+GGG | 0.574852 | 8.1:-31791965 | MS.gene44227:CDS |
| ATTACCAAATCTTTAGCCTG+TGG | 0.575869 | 8.1:+31787540 | None:intergenic |
| GTTCATTATAGTGCTCCACA+TGG | 0.578573 | 8.1:-31789341 | MS.gene44227:CDS |
| TTTCCTACTCCATCATCGGT+AGG | 0.579151 | 8.1:+31785817 | None:intergenic |
| GGTCAATCATGTCTATGTAG+TGG | 0.580668 | 8.1:+31791000 | None:intergenic |
| TGAGAACATTGACATCGGAC+CGG | 0.580861 | 8.1:-31786814 | MS.gene44227:CDS |
| TGAAGTACAGTATGTGGATG+TGG | 0.581141 | 8.1:-31787118 | MS.gene44227:CDS |
| TTAGTTGATCGTGCCACCGG+TGG | 0.582532 | 8.1:-31785216 | MS.gene44227:CDS |
| TCGTGGACCGCTAGTTGATG+AGG | 0.582635 | 8.1:-31786188 | MS.gene44227:CDS |
| ACTCCCATGATGATGTTGGT+TGG | 0.586522 | 8.1:-31791899 | MS.gene44227:CDS |
| ATACAACCCCTCGTGCTGGT+TGG | 0.587540 | 8.1:-31790938 | MS.gene44227:CDS |
| GGTCCACGAATTACCTTGAA+GGG | 0.588939 | 8.1:+31786202 | None:intergenic |
| AAGTCCTCTCATTTAACCAA+AGG | 0.591439 | 8.1:-31784620 | MS.gene44227:CDS |
| TGCATATATATTCCGCCCAA+GGG | 0.591672 | 8.1:-31786466 | MS.gene44227:CDS |
| GTTATCAAGGCAACATTAGG+AGG | 0.593368 | 8.1:+31784569 | None:intergenic |
| TGGAAGGTTGAAGGGGACAA+AGG | 0.594417 | 8.1:-31783958 | MS.gene44227:CDS |
| GAATGCTGTCTTCTGTTGGA+GGG | 0.595701 | 8.1:+31787562 | None:intergenic |
| AACAGAAGACAGCATTCCAC+AGG | 0.598348 | 8.1:-31787556 | MS.gene44227:CDS |
| AAGCCAACCAACATCATCAT+GGG | 0.600163 | 8.1:+31791896 | None:intergenic |
| ACATTGGAATCAAATAAAAG+AGG | 0.600165 | 8.1:+31789176 | None:intergenic |
| CATCCGTTTGAGTTGTCCAG+AGG | 0.600303 | 8.1:+31786764 | None:intergenic |
| CCTCATATAGATGTGCCAAA+CGG | 0.601534 | 8.1:+31784443 | None:intergenic |
| TTTAGGTATGGCTCTAGTGA+GGG | 0.603408 | 8.1:-31786599 | MS.gene44227:CDS |
| TAGTTGGAGAGGATTCCCTT+GGG | 0.603621 | 8.1:+31786451 | None:intergenic |
| ATGCAAACTTGTTCATCGAG+TGG | 0.604106 | 8.1:+31785030 | None:intergenic |
| TGAACAAGTTTGCATAGCAA+AGG | 0.606055 | 8.1:-31785022 | MS.gene44227:CDS |
| ATTCCTACCGATGATGGAGT+AGG | 0.607819 | 8.1:-31785820 | MS.gene44227:CDS |
| GATTTGTATCCAGGTAGTTG+TGG | 0.609745 | 8.1:-31787314 | MS.gene44227:intron |
| CAGTGTATTCAATTTCAGCA+TGG | 0.612815 | 8.1:+31785960 | None:intergenic |
| TCTTGAAATAATAGTTGGAG+AGG | 0.615123 | 8.1:+31786440 | None:intergenic |
| CAAGAACCTCAAGCAGTAAG+GGG | 0.615364 | 8.1:-31783934 | MS.gene44227:CDS |
| AGGTTACCTACTTGGTGCTG+AGG | 0.615402 | 8.1:-31790883 | MS.gene44227:intron |
| TCCTCACGGGAAGTAGTCAT+CGG | 0.616305 | 8.1:+31788473 | None:intergenic |
| CATTGGAAATGAGGAACACA+AGG | 0.616936 | 8.1:-31792061 | None:intergenic |
| TGATGACTATGCGAAACGGT+TGG | 0.617647 | 8.1:-31788032 | MS.gene44227:CDS |
| AAGTGCTAAACATTGATCAC+CGG | 0.623215 | 8.1:+31787835 | None:intergenic |
| AGGAAAGTACGTATTTCCAT+AGG | 0.623538 | 8.1:+31783871 | None:intergenic |
| AATAGATGGAGTAGAATACA+AGG | 0.623885 | 8.1:+31788542 | None:intergenic |
| GCATACACAAAGTACAACAC+CGG | 0.627353 | 8.1:-31791966 | MS.gene44227:CDS |
| CAGCATCAAAGACGGTGAAG+TGG | 0.630999 | 8.1:-31785190 | MS.gene44227:CDS |
| GTGTATGCACGATGAAGCCA+CGG | 0.634772 | 8.1:-31791024 | MS.gene44227:CDS |
| TAGGTTACTAGGCTGTACAA+AGG | 0.638409 | 8.1:-31785989 | MS.gene44227:CDS |
| TCAATCTGCCAACCAGCACG+AGG | 0.638439 | 8.1:+31790930 | None:intergenic |
| TTACACGAATTCTAGCTGAC+CGG | 0.638530 | 8.1:+31791384 | None:intergenic |
| AATGGCATGGAAGGTTGAAG+GGG | 0.638747 | 8.1:-31783965 | MS.gene44227:CDS |
| CAAGTGTCAATACCTCCACT+CGG | 0.641411 | 8.1:-31787006 | MS.gene44227:CDS |
| GGTGGAGCCAGCATCAAAGA+CGG | 0.641636 | 8.1:-31785198 | MS.gene44227:CDS |
| AGGCGCTTGATCGAGGACGA+CGG | 0.642101 | 8.1:-31785069 | MS.gene44227:CDS |
| CCAACATCATCATGGGAGTG+TGG | 0.645741 | 8.1:+31791903 | None:intergenic |
| CGAGGACAAACCATATCATG+TGG | 0.647700 | 8.1:-31788827 | MS.gene44227:CDS |
| TAAGTGCTCCATCCGAGTGG+AGG | 0.649027 | 8.1:+31786994 | None:intergenic |
| AATCTGCCAACCAGCACGAG+GGG | 0.650265 | 8.1:+31790932 | None:intergenic |
| GGTTAATGAAGCTAATCTTG+TGG | 0.650521 | 8.1:-31787166 | MS.gene44227:CDS |
| ATGTTGGAGCTGGTTCACGC+TGG | 0.652314 | 8.1:-31784813 | MS.gene44227:CDS |
| GTGTCGGCAGAAATGGTGGT+TGG | 0.656017 | 8.1:-31791046 | MS.gene44227:intron |
| GGACGACGGTAGAGGAGTAG+GGG | 0.657442 | 8.1:-31785055 | MS.gene44227:CDS |
| TGATGTGTCGGCAGAAATGG+TGG | 0.661957 | 8.1:-31791050 | MS.gene44227:intron |
| CAATTCCTAGAGCATCTCCA+AGG | 0.662980 | 8.1:+31788101 | None:intergenic |
| CAATCTGCCAACCAGCACGA+GGG | 0.663990 | 8.1:+31790931 | None:intergenic |
| GTGAACCAGCTCCAACATTG+TGG | 0.666345 | 8.1:+31784818 | None:intergenic |
| AGCATGTGTTGAGAATGTGT+TGG | 0.668971 | 8.1:-31791714 | MS.gene44227:CDS |
| TTGGAGAGGATTCCCTTGGG+CGG | 0.670985 | 8.1:+31786454 | None:intergenic |
| TACTGACCTCAGCACCAAGT+AGG | 0.673591 | 8.1:+31790877 | None:intergenic |
| CATGTCTATGTAGTGGACCG+TGG | 0.674129 | 8.1:+31791007 | None:intergenic |
| ACTTCAAAGTTGAAACCATG+TGG | 0.684452 | 8.1:+31789326 | None:intergenic |
| AAGTAAGTGCTCCATCCGAG+TGG | 0.685230 | 8.1:+31786991 | None:intergenic |
| TGATGAACCTCATCAACTAG+CGG | 0.689176 | 8.1:+31786181 | None:intergenic |
| TATTATAGGCGAATGTGACG+AGG | 0.698266 | 8.1:-31788845 | MS.gene44227:intron |
| TCGGTACGATTCCATCCAAG+GGG | 0.704865 | 8.1:+31787283 | None:intergenic |
| AATGGTGAGAACATTGACAT+CGG | 0.709922 | 8.1:-31786819 | MS.gene44227:CDS |
| CGGTACGATTCCATCCAAGG+GGG | 0.786068 | 8.1:+31787284 | None:intergenic |
| CATATCGCTTTAAGGCCGGG+CGG | 0.789083 | 8.1:+31788321 | None:intergenic |
| ATACACAAAGTACAACACCG+GGG | 0.864914 | 8.1:-31791964 | MS.gene44227:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 31783858 | 31792075 | 31783858 | ID=MS.gene44227 |
| chr8.1 | mRNA | 31783858 | 31792075 | 31783858 | ID=MS.gene44227.t1;Parent=MS.gene44227 |
| chr8.1 | exon | 31791851 | 31792075 | 31791851 | ID=MS.gene44227.t1.exon1;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31791851 | 31792075 | 31791851 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31791655 | 31791738 | 31791655 | ID=MS.gene44227.t1.exon2;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31791655 | 31791738 | 31791655 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31791388 | 31791476 | 31791388 | ID=MS.gene44227.t1.exon3;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31791388 | 31791476 | 31791388 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31790884 | 31791058 | 31790884 | ID=MS.gene44227.t1.exon4;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31790884 | 31791058 | 31790884 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31789301 | 31789504 | 31789301 | ID=MS.gene44227.t1.exon5;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31789301 | 31789504 | 31789301 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31789133 | 31789204 | 31789133 | ID=MS.gene44227.t1.exon6;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31789133 | 31789204 | 31789133 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31788746 | 31788859 | 31788746 | ID=MS.gene44227.t1.exon7;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31788746 | 31788859 | 31788746 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31788480 | 31788580 | 31788480 | ID=MS.gene44227.t1.exon8;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31788480 | 31788580 | 31788480 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31788295 | 31788388 | 31788295 | ID=MS.gene44227.t1.exon9;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31788295 | 31788388 | 31788295 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31788015 | 31788182 | 31788015 | ID=MS.gene44227.t1.exon10;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31788015 | 31788182 | 31788015 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31787817 | 31787906 | 31787817 | ID=MS.gene44227.t1.exon11;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31787817 | 31787906 | 31787817 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31787545 | 31787610 | 31787545 | ID=MS.gene44227.t1.exon12;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31787545 | 31787610 | 31787545 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31787267 | 31787323 | 31787267 | ID=MS.gene44227.t1.exon13;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31787267 | 31787323 | 31787267 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31786968 | 31787187 | 31786968 | ID=MS.gene44227.t1.exon14;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31786968 | 31787187 | 31786968 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31786746 | 31786882 | 31786746 | ID=MS.gene44227.t1.exon15;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31786746 | 31786882 | 31786746 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31786580 | 31786648 | 31786580 | ID=MS.gene44227.t1.exon16;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31786580 | 31786648 | 31786580 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31786437 | 31786496 | 31786437 | ID=MS.gene44227.t1.exon17;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31786437 | 31786496 | 31786437 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31786156 | 31786227 | 31786156 | ID=MS.gene44227.t1.exon18;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31786156 | 31786227 | 31786156 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31785961 | 31786008 | 31785961 | ID=MS.gene44227.t1.exon19;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31785961 | 31786008 | 31785961 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31785732 | 31785851 | 31785732 | ID=MS.gene44227.t1.exon20;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31785732 | 31785851 | 31785732 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31785581 | 31785646 | 31785581 | ID=MS.gene44227.t1.exon21;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31785581 | 31785646 | 31785581 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31785174 | 31785286 | 31785174 | ID=MS.gene44227.t1.exon22;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31785174 | 31785286 | 31785174 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31784990 | 31785089 | 31784990 | ID=MS.gene44227.t1.exon23;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31784990 | 31785089 | 31784990 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31784756 | 31784866 | 31784756 | ID=MS.gene44227.t1.exon24;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31784756 | 31784866 | 31784756 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31784562 | 31784657 | 31784562 | ID=MS.gene44227.t1.exon25;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31784562 | 31784657 | 31784562 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31784444 | 31784491 | 31784444 | ID=MS.gene44227.t1.exon26;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31784444 | 31784491 | 31784444 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31784135 | 31784203 | 31784135 | ID=MS.gene44227.t1.exon27;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31784135 | 31784203 | 31784135 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| chr8.1 | exon | 31783858 | 31784046 | 31783858 | ID=MS.gene44227.t1.exon28;Parent=MS.gene44227.t1 |
| chr8.1 | CDS | 31783858 | 31784046 | 31783858 | ID=cds.MS.gene44227.t1;Parent=MS.gene44227.t1 |
| Gene Sequence |
| Protein sequence |
