AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44228

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44228.t1 MTR_8g075340 97.528 1173 29 0 1 1173 1 1173 0.0 2380
MS.gene44228.t1 MTR_5g022470 74.727 1191 253 13 4 1167 28 1197 0.0 1755
MS.gene44228.t1 MTR_5g022470 73.577 1124 249 13 4 1100 28 1130 0.0 1628
MS.gene44228.t1 MTR_1g090850 29.449 472 300 11 280 734 197 652 1.25e-41 167
MS.gene44228.t1 MTR_1g090850 39.231 130 65 4 1024 1153 921 1036 1.08e-16 86.3
MS.gene44228.t1 MTR_1g087140 30.388 464 269 15 303 735 231 671 3.99e-40 162
MS.gene44228.t1 MTR_1g087140 30.303 198 116 6 957 1153 908 1084 6.10e-17 87.0
MS.gene44228.t1 MTR_8g080770 33.439 314 197 3 424 726 236 548 5.51e-36 148
MS.gene44228.t1 MTR_8g080770 36.296 135 63 3 1026 1154 729 846 8.73e-17 86.3
MS.gene44228.t1 MTR_8g080770 33.439 314 197 3 424 726 345 657 9.07e-36 147
MS.gene44228.t1 MTR_8g080770 36.296 135 63 3 1026 1154 838 955 7.02e-17 87.0
MS.gene44228.t1 MTR_3g085130 33.228 316 193 6 427 726 193 506 1.93e-35 146
MS.gene44228.t1 MTR_3g085130 34.161 161 81 4 999 1154 669 809 8.09e-17 86.7
MS.gene44228.t1 MTR_8g106150 34.091 308 153 5 460 726 372 670 5.37e-35 145
MS.gene44228.t1 MTR_8g106150 35.664 143 60 4 1026 1154 858 982 1.68e-16 85.5
MS.gene44228.t1 MTR_3g085130 32.381 315 197 4 427 726 403 716 6.43e-35 145
MS.gene44228.t1 MTR_3g085130 34.161 161 81 4 999 1154 879 1019 4.81e-17 87.4
MS.gene44228.t1 MTR_8g106150 34.091 308 153 5 460 726 129 427 9.72e-35 143
MS.gene44228.t1 MTR_8g106150 35.664 143 60 4 1026 1154 615 739 1.25e-16 85.9
MS.gene44228.t1 MTR_5g097410 27.032 529 319 16 426 921 572 1066 3.23e-33 140
MS.gene44228.t1 MTR_5g097410 31.944 144 61 4 1030 1154 1075 1200 2.60e-12 72.0
MS.gene44228.t1 MTR_4g031150 32.075 265 157 4 461 725 383 624 5.45e-29 125
MS.gene44228.t1 MTR_7g109150 32.031 256 152 3 461 716 334 567 7.40e-29 124
MS.gene44228.t1 MTR_3g105590 31.618 272 165 5 474 726 373 642 5.47e-27 119
MS.gene44228.t1 MTR_1g013360 26.110 383 219 9 405 726 298 677 3.09e-24 110
MS.gene44228.t1 MTR_8g019680 33.987 153 85 5 1017 1169 17 153 3.83e-14 71.6
MS.gene44228.t1 MTR_7g116330 27.778 252 142 10 909 1153 527 745 7.54e-14 76.6
MS.gene44228.t1 MTR_7g116330 24.277 346 218 9 460 792 364 678 2.05e-12 72.0
MS.gene44228.t1 MTR_8g063580 31.690 142 72 4 1029 1167 12 131 1.84e-12 66.6
MS.gene44228.t1 MTR_1g073840 29.496 139 97 1 461 599 355 492 2.69e-12 71.6
MS.gene44228.t1 MTR_1g079790 22.864 398 245 15 460 837 360 715 1.05e-11 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44228.t1 AT2G17820 63.682 1195 372 17 8 1167 30 1197 0.0 1489
MS.gene44228.t1 AT2G47430 25.230 1197 694 42 57 1154 14 1108 5.18e-75 271
MS.gene44228.t1 AT2G01830 33.141 347 205 6 405 726 406 750 5.22e-41 165
MS.gene44228.t1 AT2G01830 36.735 147 67 4 1015 1154 932 1059 4.46e-17 87.8
MS.gene44228.t1 AT2G01830 33.141 347 205 6 405 726 383 727 5.72e-41 164
MS.gene44228.t1 AT2G01830 36.735 147 67 4 1015 1154 909 1036 4.88e-17 87.4
MS.gene44228.t1 AT2G01830 33.141 347 205 6 405 726 383 727 5.72e-41 164
MS.gene44228.t1 AT2G01830 36.735 147 67 4 1015 1154 909 1036 4.88e-17 87.4
MS.gene44228.t1 AT2G01830 33.141 347 205 6 405 726 383 727 5.72e-41 164
MS.gene44228.t1 AT2G01830 36.735 147 67 4 1015 1154 909 1036 4.88e-17 87.4
MS.gene44228.t1 AT2G01830 33.141 347 205 6 405 726 383 727 5.72e-41 164
MS.gene44228.t1 AT2G01830 36.735 147 67 4 1015 1154 909 1036 4.88e-17 87.4
MS.gene44228.t1 AT2G01830 33.141 347 205 6 405 726 395 739 6.34e-41 164
MS.gene44228.t1 AT2G01830 36.735 147 67 4 1015 1154 921 1048 5.21e-17 87.4
MS.gene44228.t1 AT1G27320 34.985 323 196 4 405 716 384 703 4.72e-39 158
MS.gene44228.t1 AT1G27320 34.014 147 62 3 1026 1154 887 1016 1.98e-14 79.0
MS.gene44228.t1 AT5G35750 32.919 322 193 6 424 726 540 857 1.54e-36 150
MS.gene44228.t1 AT5G35750 30.263 152 69 4 1030 1162 1036 1169 2.51e-13 75.5
MS.gene44228.t1 AT1G66340 32.558 258 148 3 461 718 333 564 1.85e-31 133
MS.gene44228.t1 AT5G10720 31.765 255 153 5 474 726 369 604 3.30e-27 120
MS.gene44228.t1 AT2G40940 31.818 264 157 5 460 723 332 572 9.51e-25 111
MS.gene44228.t1 AT3G04580 35.664 143 72 4 1021 1162 634 757 1.88e-14 79.0
MS.gene44228.t1 AT3G04580 24.398 332 217 9 459 777 355 665 4.19e-11 67.8
MS.gene44228.t1 AT3G04580 35.664 143 72 4 1021 1162 634 757 1.88e-14 79.0
MS.gene44228.t1 AT3G04580 24.398 332 217 9 459 777 355 665 4.19e-11 67.8
MS.gene44228.t1 AT3G23150 23.714 350 228 10 461 792 357 685 1.78e-11 69.3

Find 216 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAAAGATGATTCATATTT+TGG 0.110114 8.1:+31780763 MS.gene44228:CDS
ACCTCATATTTGCAAGAAAT+TGG 0.164195 8.1:-31778222 None:intergenic
CAGAAAAGTAACTGCTTATT+AGG 0.180290 8.1:+31781001 MS.gene44228:CDS
TCACTATCACCATAAGAATT+TGG 0.199041 8.1:-31779129 None:intergenic
GTTCTCATGTTGCTTCATTT+TGG 0.222254 8.1:-31779196 None:intergenic
CCAAGATGTTATTGAGTAAA+TGG 0.227661 8.1:-31778482 None:intergenic
TAGGTATTGACCCGAGTAAA+TGG 0.298638 8.1:+31779467 MS.gene44228:intron
GCCTCATATCCATCCATCTT+TGG 0.303088 8.1:-31781493 None:intergenic
TTCAGCAGCATTGCCGGTTT+GGG 0.306475 8.1:+31776910 MS.gene44228:CDS
CATACCAAGAAAGCATATAA+TGG 0.311598 8.1:+31778009 MS.gene44228:CDS
GAAATAAGGAAATCAGAAAT+TGG 0.311793 8.1:+31781523 MS.gene44228:CDS
AGCTATACTTATTGAGTCTT+CGG 0.317592 8.1:-31776813 None:intergenic
AAGCTCCGTCTTTGCGGTAT+TGG 0.318318 8.1:-31780696 None:intergenic
AAAGAAACCTGAGCTTAAAA+TGG 0.319263 8.1:+31777105 MS.gene44228:CDS
TTTCAGCAGCATTGCCGGTT+TGG 0.320446 8.1:+31776909 MS.gene44228:CDS
CCTGTCAATGGCGAGAAAAT+TGG 0.321831 8.1:+31776770 MS.gene44228:CDS
TTCATATGACTTGATCCTAA+TGG 0.325693 8.1:+31781342 MS.gene44228:CDS
TTCTCTTTGTTTGTCTCCAT+TGG 0.328818 8.1:-31780945 None:intergenic
GCCAATTTCTTGCAAATATG+AGG 0.329015 8.1:+31778221 MS.gene44228:CDS
AACCAAGTCTCTAAATAGTT+TGG 0.329706 8.1:+31776246 MS.gene44228:CDS
AGTCAAATTCTGCCTCTTCT+AGG 0.333858 8.1:-31778666 None:intergenic
CATGCCCACTTCTAAACATT+TGG 0.335841 8.1:-31781605 None:intergenic
ATACCAAGAAAGCATATAAT+GGG 0.337592 8.1:+31778010 MS.gene44228:CDS
CCGCCTTTCTTCTTGCTTCG+AGG 0.341358 8.1:-31778177 None:intergenic
ATGATATGCCAAAGCTAGTT+CGG 0.350156 8.1:+31778856 MS.gene44228:CDS
ATGAGGCAACAAAAGAAATA+AGG 0.352677 8.1:+31781509 MS.gene44228:CDS
TATAATCGCATTAGTGTTCC+TGG 0.355538 8.1:-31780159 None:intergenic
AGAAATCAAGATTGTCAAAA+AGG 0.359968 8.1:+31780131 MS.gene44228:CDS
CTCTTTCTGCTTGAGTGCCT+TGG 0.362577 8.1:-31776396 None:intergenic
CTTGCGAAGCTCCGTCTTTG+CGG 0.366868 8.1:-31780702 None:intergenic
AGGCATGGAGGCACCGGTCT+TGG 0.367514 8.1:+31779704 MS.gene44228:intron
TAGACTTGAGCACAGATATA+TGG 0.369303 8.1:+31780600 MS.gene44228:CDS
GACATTGAGTAGTTGAATAC+TGG 0.372323 8.1:-31775664 None:intergenic
GGTTCTGACATATCTGAAAT+TGG 0.372966 8.1:+31780902 MS.gene44228:CDS
TCTTTGTGAAATGCCATGTT+AGG 0.374134 8.1:-31776216 None:intergenic
TGATATGCCAAAGCTAGTTC+GGG 0.388131 8.1:+31778857 MS.gene44228:CDS
CAGGCAGTGGATGCTCTAAA+TGG 0.388139 8.1:+31781262 MS.gene44228:CDS
GTTACTTTCAGCAGCATTGC+CGG 0.388211 8.1:+31776904 MS.gene44228:CDS
CTTATTACAGGTTAATAAGA+TGG 0.389612 8.1:+31780104 MS.gene44228:intron
TTCTAAATTTATTAGCATAC+AGG 0.393462 8.1:+31780532 MS.gene44228:CDS
TATAGCACATAGGTGGAATC+TGG 0.394834 8.1:+31778634 MS.gene44228:intron
TCCATCAGCTTAAAGTCAAT+TGG 0.397490 8.1:-31781646 None:intergenic
ATCATCTTTGCTTTGTAAAG+AGG 0.401741 8.1:-31780752 None:intergenic
TGTGAAAATCCAAATTCTTA+TGG 0.403470 8.1:+31779120 MS.gene44228:CDS
TATTAGAAGTCTTCTTTGAA+TGG 0.404156 8.1:-31779218 None:intergenic
ATCCGAATTGCTTCTGCTCC+AGG 0.406373 8.1:-31779161 None:intergenic
TTGATAACAAAATGATACTT+TGG 0.408163 8.1:+31779241 MS.gene44228:CDS
CCATTTACTCAATAACATCT+TGG 0.410502 8.1:+31778482 MS.gene44228:CDS
TTCATATGCTGCAAATGAAT+TGG 0.417578 8.1:-31776699 None:intergenic
CTTGATCCTAATGGATTGTC+AGG 0.421407 8.1:+31781351 MS.gene44228:CDS
GAATTCAAACCCTCCGGAGC+TGG 0.421849 8.1:-31780512 None:intergenic
TCAACAACAATGACAAATGT+TGG 0.424662 8.1:-31780566 None:intergenic
TACCTGACGGTGTAGCTTCA+TGG 0.425005 8.1:+31776849 MS.gene44228:CDS
ACACCGATGGCAGCAGTAAT+CGG 0.426125 8.1:+31778369 MS.gene44228:CDS
GAATCTCCCCGAACTAGCTT+TGG 0.429030 8.1:-31778864 None:intergenic
ACAATGACAAATGTTGGGTT+TGG 0.429280 8.1:-31780560 None:intergenic
AAAAGCATTGTTGCAGTTGT+GGG 0.430753 8.1:+31776944 MS.gene44228:CDS
TTTATTTCAACAAGAGCAAA+AGG 0.434209 8.1:+31781058 MS.gene44228:CDS
GCTATACTTATTGAGTCTTC+GGG 0.439537 8.1:-31776812 None:intergenic
TGCTGTAGGCGACGGACAAC+AGG 0.439996 8.1:+31781243 MS.gene44228:CDS
AGAAGTCTCTTGAAGGTTTG+AGG 0.441819 8.1:+31781143 MS.gene44228:CDS
AGCCAAACTATTTAGAGACT+TGG 0.442714 8.1:-31776248 None:intergenic
ATAGCAACAAGTCTGCGATT+TGG 0.446888 8.1:+31776729 MS.gene44228:CDS
GTTATGCTAGCTATCTTGAT+TGG 0.449619 8.1:+31776181 MS.gene44228:CDS
TGACAGGATCAAGTTGTTCC+CGG 0.454045 8.1:-31776754 None:intergenic
GACTTTGGAAGGGAACTTGA+AGG 0.454376 8.1:+31778685 MS.gene44228:CDS
CAACAACAATGACAAATGTT+GGG 0.456008 8.1:-31780565 None:intergenic
ACCCTGGAGCAGAAGCAATT+CGG 0.457255 8.1:+31779159 MS.gene44228:CDS
TGCCATGAAGCTACACCGTC+AGG 0.462950 8.1:-31776851 None:intergenic
AGGCAGAATTTGACTTTGGA+AGG 0.465133 8.1:+31778674 MS.gene44228:CDS
TAAAAGCATTGTTGCAGTTG+TGG 0.467925 8.1:+31776943 MS.gene44228:CDS
ACGCGAGAGCGAAATTTGTA+TGG 0.470371 8.1:+31780654 MS.gene44228:CDS
TCTCTTTGTGAGTGAAAGAA+TGG 0.472536 8.1:-31781674 None:intergenic
ATGAGTCAATGTAATATTGC+TGG 0.473523 8.1:-31777243 None:intergenic
ACTCGATAACTGTCAAGTAT+AGG 0.475293 8.1:+31776594 MS.gene44228:CDS
ACCAATTGACTTTAAGCTGA+TGG 0.475909 8.1:+31781645 MS.gene44228:CDS
GAAGAGGCAGAATTTGACTT+TGG 0.476112 8.1:+31778670 MS.gene44228:CDS
AGCATTTCATAGAGACTTGA+AGG 0.476420 8.1:+31776631 MS.gene44228:CDS
CGTGGTTCGCCTAGCAATCA+TGG 0.479373 8.1:+31775709 MS.gene44228:CDS
ATTAGGATCAAGTCATATGA+AGG 0.480841 8.1:-31781340 None:intergenic
AAGACGGAGCTTCGCAAGAA+AGG 0.481736 8.1:+31780707 MS.gene44228:CDS
TGATGCTCACTTTCCAGCTC+CGG 0.483762 8.1:+31780499 MS.gene44228:CDS
CACATACCTGACAATCCATT+AGG 0.485467 8.1:-31781357 None:intergenic
ATATTGCTGGTGACCTAGCC+TGG 0.485638 8.1:-31777230 None:intergenic
AAGAAAATTCCACAAGGATG+TGG 0.485997 8.1:+31775628 MS.gene44228:CDS
CAAGTCTGCGATTTGGTACC+GGG 0.486373 8.1:+31776736 MS.gene44228:CDS
ATCCTACTACAGTGTCTTCG+TGG 0.488058 8.1:+31775691 MS.gene44228:CDS
TGTGATGTTGCAAGCTCTGA+TGG 0.488910 8.1:+31780881 MS.gene44228:CDS
AGCTTCATGGCACGTTTCTG+TGG 0.489431 8.1:+31776862 MS.gene44228:CDS
TCACTGTGTATTATCGTCAT+TGG 0.491172 8.1:+31778082 MS.gene44228:CDS
GCCAAAGATGGATGGATATG+AGG 0.491952 8.1:+31781492 MS.gene44228:CDS
AACACAGAATCCCATTTACT+CGG 0.494050 8.1:-31779478 None:intergenic
CTAAAATAATTTCTACATTG+TGG 0.494150 8.1:-31778741 None:intergenic
AATGGAAAGAAGTCTCTTGA+AGG 0.494792 8.1:+31781136 MS.gene44228:CDS
ACAAGTCTGCGATTTGGTAC+CGG 0.495830 8.1:+31776735 MS.gene44228:CDS
TCTTTGCATTGTCAGATCCT+TGG 0.496165 8.1:+31779727 MS.gene44228:CDS
AGTGAAACAAGTAGGATTAG+TGG 0.496758 8.1:+31781097 MS.gene44228:CDS
CAGGTACTTCTTGCACTACA+TGG 0.501756 8.1:+31780338 MS.gene44228:intron
TCATGAACCTCATGACTTGG+AGG 0.502697 8.1:-31777199 None:intergenic
TGCCCATGTGACAGCCCTCA+TGG 0.504539 8.1:-31776546 None:intergenic
TAGTGTAGGGCAGTTAATGA+AGG 0.504796 8.1:+31776985 MS.gene44228:CDS
TTGCGGTATTGGACGAGTCA+TGG 0.505234 8.1:-31780685 None:intergenic
TCAAGTCTCTATGAAATGCT+TGG 0.505424 8.1:-31776628 None:intergenic
TGCTCACTTTCCAGCTCCGG+AGG 0.508924 8.1:+31780502 MS.gene44228:CDS
AGGTATTGACCCGAGTAAAT+GGG 0.509028 8.1:+31779468 MS.gene44228:intron
TCTTCATGAACCTCATGACT+TGG 0.512203 8.1:-31777202 None:intergenic
GAAGACTCAATAAGTATAGC+TGG 0.512406 8.1:+31776815 MS.gene44228:CDS
CATTTCAGGCATGGAGGCAC+CGG 0.512548 8.1:+31779698 MS.gene44228:intron
TTTGTTGAATTTGTAAGTAG+AGG 0.513089 8.1:-31777085 None:intergenic
AAGATACAGCAGTAATTCAA+AGG 0.514361 8.1:+31781179 MS.gene44228:CDS
GGTTCAAGTAAAGCTATGAA+TGG 0.518559 8.1:+31781118 MS.gene44228:CDS
TCTAATCTTGTAACTGCCAA+TGG 0.521244 8.1:+31780929 MS.gene44228:CDS
GAACTAGTTGATAAGCATAG+TGG 0.522807 8.1:+31777007 MS.gene44228:CDS
ATGTGGCTAAAGAAAACATA+CGG 0.523995 8.1:+31777166 MS.gene44228:CDS
CAACTGCACTTTATAGTGTA+GGG 0.526485 8.1:+31776972 MS.gene44228:CDS
TTATTACAGGTTAATAAGAT+GGG 0.527467 8.1:+31780105 MS.gene44228:intron
AATAAAGCAGATGCCAAAGA+TGG 0.528045 8.1:+31781480 MS.gene44228:intron
ACAACTGCACTTTATAGTGT+AGG 0.528302 8.1:+31776971 MS.gene44228:CDS
ATCCATGAGGGCTGTCACAT+GGG 0.532393 8.1:+31776544 MS.gene44228:CDS
AATTTAGAATTCAAACCCTC+CGG 0.533291 8.1:-31780518 None:intergenic
ATTAACTGACCATGATTGCT+AGG 0.534354 8.1:-31775718 None:intergenic
CTCGTCCAATACCGCAAAGA+CGG 0.534724 8.1:+31780691 MS.gene44228:CDS
GATGCTCTAAATGGCATGCC+TGG 0.535325 8.1:+31781271 MS.gene44228:CDS
GTAGATTAATTACATCTAAG+TGG 0.536265 8.1:+31780369 MS.gene44228:CDS
TTATTAGAAGAATCCCAAAC+CGG 0.537322 8.1:-31776923 None:intergenic
CACCGTCAGGTACTTGAGAC+AGG 0.538434 8.1:-31776838 None:intergenic
GACAATGCAAAGACCAAGAC+CGG 0.538892 8.1:-31779717 None:intergenic
TTGTTGAATTTGTAAGTAGA+GGG 0.538960 8.1:-31777084 None:intergenic
CATGAAGAGAACGCCAGGCT+AGG 0.542087 8.1:+31777217 MS.gene44228:CDS
GAACAACTTGATCCTGTCAA+TGG 0.544898 8.1:+31776758 MS.gene44228:CDS
TCCTCTCAGAATAATGTGAC+CGG 0.546854 8.1:-31779094 None:intergenic
TGTAAGTAGAGGGTCATTTG+TGG 0.547760 8.1:-31777074 None:intergenic
TCACTATGGAAGCATCTGAA+TGG 0.547812 8.1:+31780411 MS.gene44228:CDS
AATGTTCCACATCCTCAAGA+TGG 0.547990 8.1:-31776302 None:intergenic
TGAAAGAGCCTTCAAAACAT+TGG 0.549125 8.1:+31778042 MS.gene44228:CDS
GCAAAAGGTGAAGATTCTAA+AGG 0.549796 8.1:+31781073 MS.gene44228:CDS
TTCTGCAACGTCCCATCTTG+AGG 0.550001 8.1:+31776290 MS.gene44228:CDS
ACTTTGGAAGGGAACTTGAA+GGG 0.550352 8.1:+31778686 MS.gene44228:CDS
GAAGTTGACGACACAGGCTG+TGG 0.553420 8.1:+31779267 MS.gene44228:CDS
ATTGACAGATGGAGTATCAA+AGG 0.553958 8.1:+31778123 MS.gene44228:CDS
AGGTTCATGAAGAGAACGCC+AGG 0.554398 8.1:+31777212 MS.gene44228:CDS
AAGCAGATGCCAAAGATGGA+TGG 0.554555 8.1:+31781484 MS.gene44228:intron
AATCCATGAGGGCTGTCACA+TGG 0.555825 8.1:+31776543 MS.gene44228:CDS
TGTTGTTCTGTGGCATCCAC+AGG 0.556728 8.1:-31780198 None:intergenic
GCTTCATGGCACGTTTCTGT+GGG 0.557558 8.1:+31776863 MS.gene44228:CDS
AACTAGTTGATAAGCATAGT+GGG 0.557926 8.1:+31777008 MS.gene44228:CDS
ATGGAAGCATCTGAATGGAA+TGG 0.558044 8.1:+31780416 MS.gene44228:CDS
GGTCTCATTATATGAAAGAT+CGG 0.560737 8.1:-31776678 None:intergenic
TGCTTATTAGGATTAAGTAA+TGG 0.563159 8.1:+31781013 MS.gene44228:CDS
CATGCGACTAACTGCACCTG+TGG 0.564009 8.1:+31780182 MS.gene44228:CDS
AGATACAGCAGTAATTCAAA+GGG 0.566152 8.1:+31781180 MS.gene44228:CDS
TCGGGGAGATTCTGCGAGAG+TGG 0.566872 8.1:+31778875 MS.gene44228:CDS
GGCAGAATTTGACTTTGGAA+GGG 0.570782 8.1:+31778675 MS.gene44228:CDS
ATTGTGTTTCTTTCAACACC+AGG 0.570876 8.1:-31781289 None:intergenic
AGGCGACGGACAACAGGCAG+TGG 0.572133 8.1:+31781249 MS.gene44228:CDS
TCCGAATTGCTTCTGCTCCA+GGG 0.572483 8.1:-31779160 None:intergenic
AACGTCCCATCTTGAGGATG+TGG 0.573006 8.1:+31776296 MS.gene44228:CDS
CATGAACCTCATGACTTGGA+GGG 0.573555 8.1:-31777198 None:intergenic
GCTCACTTTCCAGCTCCGGA+GGG 0.580319 8.1:+31780503 MS.gene44228:CDS
GGAGCCACCGTTGTTGCTGT+AGG 0.580845 8.1:+31781229 MS.gene44228:CDS
ATAACTGTCAAGTATAGGAA+TGG 0.583037 8.1:+31776599 MS.gene44228:CDS
AGGATTAAGTAATGGATACA+TGG 0.583551 8.1:+31781021 MS.gene44228:CDS
TCACCTCGAAGCAAGAAGAA+AGG 0.583647 8.1:+31778174 MS.gene44228:CDS
ATGTTCCACATCCTCAAGAT+GGG 0.584461 8.1:-31776301 None:intergenic
AATCCGATTACTGCTGCCAT+CGG 0.585511 8.1:-31778372 None:intergenic
TGAGCTGTAAGAGCGACGAT+TGG 0.588069 8.1:-31781562 None:intergenic
CGAAGCAAGAAGAAAGGCGG+AGG 0.588877 8.1:+31778180 MS.gene44228:CDS
AAATAAGATTCATACCAGAA+AGG 0.590579 8.1:-31778765 None:intergenic
ACCGTTGTTGCTGTAGGCGA+CGG 0.591122 8.1:+31781235 MS.gene44228:CDS
CTCTCGCGTAGTACTTGTGA+AGG 0.591922 8.1:-31780640 None:intergenic
GTCACATTATTCTGAGAGGA+TGG 0.593714 8.1:+31779097 MS.gene44228:CDS
TGGAAAACTTGTCCTAGAAG+AGG 0.595077 8.1:+31778654 MS.gene44228:CDS
CTAAAGGTAGTGAAACAAGT+AGG 0.597373 8.1:+31781089 MS.gene44228:CDS
TGAAGCCAAATGTTTAGAAG+TGG 0.598691 8.1:+31781600 MS.gene44228:CDS
AACCACGAAGACACTGTAGT+AGG 0.600067 8.1:-31775693 None:intergenic
TTACAGGTTAATAAGATGGG+TGG 0.605671 8.1:+31780108 MS.gene44228:intron
GGCCTGTCTCAAGTACCTGA+CGG 0.611371 8.1:+31776836 MS.gene44228:CDS
TGGTTTGAAGTTGACGACAC+AGG 0.613885 8.1:+31779261 MS.gene44228:CDS
TCATCATTGTTAAGATGACA+AGG 0.613919 8.1:-31781701 None:intergenic
TATGTATTTGACCTCTCAAG+AGG 0.615158 8.1:+31777033 MS.gene44228:CDS
CAAATGTTTAGAAGTGGGCA+TGG 0.615383 8.1:+31781606 MS.gene44228:CDS
GAGTATGTTATCAGAAGCCA+CGG 0.615717 8.1:+31776370 MS.gene44228:CDS
TAACATCTTGGATATAAGCA+AGG 0.616190 8.1:+31778494 MS.gene44228:CDS
GAAGCCAAATGTTTAGAAGT+GGG 0.619807 8.1:+31781601 MS.gene44228:CDS
CAATTTCCCTCCAAGTCATG+AGG 0.619846 8.1:+31777192 MS.gene44228:CDS
CTTGAGTGCCTTGGTTACCG+TGG 0.624316 8.1:-31776387 None:intergenic
TACAGCAGTAATTCAAAGGG+TGG 0.626931 8.1:+31781183 MS.gene44228:CDS
CACTCAAGCAGAAAGAGTTG+AGG 0.627252 8.1:+31776402 MS.gene44228:CDS
ATCAGAAGCCACGGTAACCA+AGG 0.628492 8.1:+31776379 MS.gene44228:CDS
TTAGGATCAAGTCATATGAA+GGG 0.630200 8.1:-31781339 None:intergenic
ATAATCGCATTAGTGTTCCT+GGG 0.633707 8.1:-31780158 None:intergenic
TACCAAGAAAGCATATAATG+GGG 0.634950 8.1:+31778011 MS.gene44228:CDS
GGCAATGCTGCTGAAAGTAA+CGG 0.637366 8.1:-31776902 None:intergenic
TAAGAGCGACGATTGGAATG+TGG 0.639382 8.1:-31781555 None:intergenic
TGATAACGAAGTAATAAGAG+AGG 0.639587 8.1:+31777138 MS.gene44228:CDS
GTCTACTCACTATCCTAACA+TGG 0.643699 8.1:+31776203 MS.gene44228:CDS
GATAACGAAGTAATAAGAGA+GGG 0.644016 8.1:+31777139 MS.gene44228:CDS
ACACAGAATCCCATTTACTC+GGG 0.644528 8.1:-31779477 None:intergenic
GACTTGACAATGTTGTTCTG+TGG 0.645112 8.1:-31780208 None:intergenic
GTTGCAGAAGTTCGTAACGC+AGG 0.651401 8.1:-31776276 None:intergenic
AAGCAAATAGCCCTCTTGAG+AGG 0.654817 8.1:-31777044 None:intergenic
ATGTATTTGACCTCTCAAGA+GGG 0.661239 8.1:+31777034 MS.gene44228:CDS
ACCAAGAAAGCATATAATGG+GGG 0.661897 8.1:+31778012 MS.gene44228:CDS
TGTGGCTAAAGAAAACATAC+GGG 0.667227 8.1:+31777167 MS.gene44228:CDS
TCCGTCGCCTACAGCAACAA+CGG 0.667951 8.1:-31781236 None:intergenic
GCCGGTCACATTATTCTGAG+AGG 0.668073 8.1:+31779093 MS.gene44228:intron
CACAGATGTATGAATCCATG+AGG 0.669707 8.1:+31776531 MS.gene44228:intron
TCATGAACTGAGGACACCGA+TGG 0.669919 8.1:+31778356 MS.gene44228:CDS
CCTCGAAGCAAGAAGAAAGG+CGG 0.694393 8.1:+31778177 MS.gene44228:CDS
ACAGATGTATGAATCCATGA+GGG 0.694819 8.1:+31776532 MS.gene44228:intron
TGCATTACAGTCATGAACTG+AGG 0.713029 8.1:+31778346 MS.gene44228:intron
TAATAAGAGAGGGAGCGATG+TGG 0.713072 8.1:+31777149 MS.gene44228:CDS
GATATGCCAAAGCTAGTTCG+GGG 0.714157 8.1:+31778858 MS.gene44228:CDS
AGGCAGAAGAAAATTCCACA+AGG 0.721322 8.1:+31775622 MS.gene44228:CDS
GTCGCCTACAGCAACAACGG+TGG 0.727532 8.1:-31781233 None:intergenic
ATTGAGTAAATGGAGCAATG+CGG 0.793121 8.1:-31778472 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTTGTTTAAATACTA+CGG - chr8.1:31775941-31775960 None:intergenic 10.0%
!!! AAGAAAAAAAAAATAGTTTT+AGG + chr8.1:31779348-31779367 MS.gene44228:intron 10.0%
!!! TATAATGTATTTATACATTT+TGG + chr8.1:31777952-31777971 MS.gene44228:intron 10.0%
!! AAAAAATAAGATCAAATGTA+AGG - chr8.1:31777324-31777343 None:intergenic 15.0%
!!! AAATAAATAACCAATTTTGT+TGG + chr8.1:31776128-31776147 MS.gene44228:intron 15.0%
!!! CTTTATATTATCTTTTCTTA+TGG + chr8.1:31777758-31777777 MS.gene44228:intron 15.0%
!!! TAAAATTTTACGATGTTATA+TGG + chr8.1:31777354-31777373 MS.gene44228:intron 15.0%
!! AAAATTCTCTAGTTAGTTAA+AGG - chr8.1:31779815-31779834 None:intergenic 20.0%
!! AAATTCAAAGATTTGTCAAA+TGG + chr8.1:31779009-31779028 MS.gene44228:intron 20.0%
!! AATAAACCACTAAAAGAAAA+TGG - chr8.1:31776483-31776502 None:intergenic 20.0%
!! ACAAAAGAAAAATATGAAAG+AGG + chr8.1:31780817-31780836 MS.gene44228:CDS 20.0%
!! CAAAATTGTAACATCATATA+AGG - chr8.1:31775749-31775768 None:intergenic 20.0%
!! CTAAAATAATTTCTACATTG+TGG - chr8.1:31778744-31778763 None:intergenic 20.0%
!! TAAATTCTAACTTATAGCAA+AGG - chr8.1:31776456-31776475 None:intergenic 20.0%
!! TGCTTAGAGAAATTATTTAA+AGG + chr8.1:31778561-31778580 MS.gene44228:intron 20.0%
!! TTATTACAGGTTAATAAGAT+GGG + chr8.1:31780105-31780124 MS.gene44228:intron 20.0%
!! TTATTTATCTTCACAACAAA+GGG - chr8.1:31776114-31776133 None:intergenic 20.0%
!! TTCTAAATTTATTAGCATAC+AGG + chr8.1:31780532-31780551 MS.gene44228:CDS 20.0%
!! TTTATTTATCTTCACAACAA+AGG - chr8.1:31776115-31776134 None:intergenic 20.0%
!!! AAAATTTATAATTTGTGTCC+TGG - chr8.1:31777907-31777926 None:intergenic 20.0%
!!! AAAATTTTCTGTGTTTGAAA+TGG + chr8.1:31779429-31779448 MS.gene44228:intron 20.0%
!!! AAATTTATAATTTGTGTCCT+GGG - chr8.1:31777906-31777925 None:intergenic 20.0%
!!! AAATTTTCTGTGTTTGAAAT+GGG + chr8.1:31779430-31779449 MS.gene44228:intron 20.0%
!!! AATATAAAGTCAAACTGTTT+TGG - chr8.1:31777747-31777766 None:intergenic 20.0%
!!! ACATTTTCTTATTTGAGTAA+CGG - chr8.1:31778448-31778467 None:intergenic 20.0%
!!! ATGTATTTATACATTTTGGT+TGG + chr8.1:31777956-31777975 MS.gene44228:intron 20.0%
!!! TAGAAATATACTAGTTTGTT+TGG + chr8.1:31777569-31777588 MS.gene44228:intron 20.0%
!!! TATTTTTGGTTGCATAATAT+AGG + chr8.1:31778783-31778802 MS.gene44228:intron 20.0%
!!! TTATTCTTTTGCAAATGAAA+CGG - chr8.1:31779765-31779784 None:intergenic 20.0%
!!! TTGATAACAAAATGATACTT+TGG + chr8.1:31779241-31779260 MS.gene44228:CDS 20.0%
!!! TTTTTCTAGACTAATTTTGT+TGG - chr8.1:31779298-31779317 None:intergenic 20.0%
! AAAAAATTAAGATACACCGA+TGG + chr8.1:31778273-31778292 MS.gene44228:intron 25.0%
! AAATAAGATTCATACCAGAA+AGG - chr8.1:31778768-31778787 None:intergenic 25.0%
! AAATAATTTCTCTAAGCATG+AGG - chr8.1:31778559-31778578 None:intergenic 25.0%
! AACCATAATGCTTGAAAAAA+TGG + chr8.1:31781207-31781226 MS.gene44228:CDS 25.0%
! AATAAGCTGAAAACAGATTA+TGG - chr8.1:31777677-31777696 None:intergenic 25.0%
! ACCATAATGCTTGAAAAAAT+GGG + chr8.1:31781208-31781227 MS.gene44228:CDS 25.0%
! ACCTACATATAGCAAAATAA+TGG - chr8.1:31776163-31776182 None:intergenic 25.0%
! AGAAATCAAGATTGTCAAAA+AGG + chr8.1:31780131-31780150 MS.gene44228:CDS 25.0%
! AGATAAACAGCTTATATAAG+CGG - chr8.1:31777800-31777819 None:intergenic 25.0%
! ATAAGCTGTTTATCTAAACA+AGG + chr8.1:31777805-31777824 MS.gene44228:intron 25.0%
! CATCTTATTAACCTGTAATA+AGG - chr8.1:31780106-31780125 None:intergenic 25.0%
! CTTATTACAGGTTAATAAGA+TGG + chr8.1:31780104-31780123 MS.gene44228:intron 25.0%
! GAAATAAGGAAATCAGAAAT+TGG + chr8.1:31781523-31781542 MS.gene44228:CDS 25.0%
! GTAGATTAATTACATCTAAG+TGG + chr8.1:31780369-31780388 MS.gene44228:CDS 25.0%
! TATTAGAAGTCTTCTTTGAA+TGG - chr8.1:31779221-31779240 None:intergenic 25.0%
! TATTTAAAGGAAAACCATTG+TGG + chr8.1:31778574-31778593 MS.gene44228:intron 25.0%
! TCAAATAAGTCAACTTTAAC+CGG - chr8.1:31777391-31777410 None:intergenic 25.0%
! TCTAATATCTTATAGCACAT+AGG + chr8.1:31778624-31778643 MS.gene44228:intron 25.0%
! TGCTTATTAGGATTAAGTAA+TGG + chr8.1:31781013-31781032 MS.gene44228:CDS 25.0%
! TGTAAAGCATAGACATAAAT+AGG + chr8.1:31779915-31779934 MS.gene44228:intron 25.0%
! TGTGAAAATCCAAATTCTTA+TGG + chr8.1:31779120-31779139 MS.gene44228:CDS 25.0%
! TTATCTTCTTACATTAGTAC+CGG + chr8.1:31776061-31776080 MS.gene44228:intron 25.0%
! TTGTTGAATTTGTAAGTAGA+GGG - chr8.1:31777087-31777106 None:intergenic 25.0%
! TTTATTTCAACAAGAGCAAA+AGG + chr8.1:31781058-31781077 MS.gene44228:CDS 25.0%
! TTTGTTGAATTTGTAAGTAG+AGG - chr8.1:31777088-31777107 None:intergenic 25.0%
!! ACCAATTTTGTTGGATTAAT+CGG + chr8.1:31776137-31776156 MS.gene44228:intron 25.0%
!! AGCAAAGATGATTCATATTT+TGG + chr8.1:31780763-31780782 MS.gene44228:CDS 25.0%
!! ATACCAAGAAAGCATATAAT+GGG + chr8.1:31778010-31778029 MS.gene44228:CDS 25.0%
!! ATTACTTGACATTCTTTTGT+CGG + chr8.1:31778392-31778411 MS.gene44228:CDS 25.0%
!! ATTTGACACTTCTTATTTCA+GGG - chr8.1:31780313-31780332 None:intergenic 25.0%
!! TAAGATATTAGACGTCTTTT+TGG - chr8.1:31778616-31778635 None:intergenic 25.0%
!! TAGATTCCATTTTCTTTTAG+TGG + chr8.1:31776474-31776493 MS.gene44228:intron 25.0%
!! TCATTTTATCTCCTTATTAC+AGG + chr8.1:31780092-31780111 MS.gene44228:intron 25.0%
!!! GAAATTATTTTAGACCTTTC+TGG + chr8.1:31778751-31778770 MS.gene44228:CDS 25.0%
!!! TCTGGTATGAATCTTATTTT+TGG + chr8.1:31778769-31778788 MS.gene44228:intron 25.0%
!!! TTTTTTCTTTTGCCACAAAA+GGG - chr8.1:31779337-31779356 None:intergenic 25.0%
!!! TTTTTTTCTTTTGCCACAAA+AGG - chr8.1:31779338-31779357 None:intergenic 25.0%
AAAGAAACCTGAGCTTAAAA+TGG + chr8.1:31777105-31777124 MS.gene44228:CDS 30.0%
AACCAAGTCTCTAAATAGTT+TGG + chr8.1:31776246-31776265 MS.gene44228:CDS 30.0%
AAGAAAAATAGCACACTAAC+AGG + chr8.1:31775602-31775621 MS.gene44228:CDS 30.0%
AAGATACAGCAGTAATTCAA+AGG + chr8.1:31781179-31781198 MS.gene44228:CDS 30.0%
AATATCTTATAGCACATAGG+TGG + chr8.1:31778627-31778646 MS.gene44228:intron 30.0%
AATCTTGAAAAAGCTTCCTT+TGG + chr8.1:31777273-31777292 MS.gene44228:CDS 30.0%
AATTGTTAGAACAGCAAATC+CGG - chr8.1:31776083-31776102 None:intergenic 30.0%
ACCTCATATTTGCAAGAAAT+TGG - chr8.1:31778225-31778244 None:intergenic 30.0%
AGATACAGCAGTAATTCAAA+GGG + chr8.1:31781180-31781199 MS.gene44228:CDS 30.0%
AGCTATACTTATTGAGTCTT+CGG - chr8.1:31776816-31776835 None:intergenic 30.0%
AGTGTCTTAAAATGTACCAA+AGG - chr8.1:31777292-31777311 None:intergenic 30.0%
ATAACTGTCAAGTATAGGAA+TGG + chr8.1:31776599-31776618 MS.gene44228:CDS 30.0%
ATACATCTGTGGGAAAAAAT+TGG - chr8.1:31776522-31776541 None:intergenic 30.0%
ATCAAGATTGTCAAAAAGGA+AGG + chr8.1:31780135-31780154 MS.gene44228:CDS 30.0%
ATCATCTTTGCTTTGTAAAG+AGG - chr8.1:31780755-31780774 None:intergenic 30.0%
ATGAGGCAACAAAAGAAATA+AGG + chr8.1:31781509-31781528 MS.gene44228:CDS 30.0%
ATGAGTCAATGTAATATTGC+TGG - chr8.1:31777246-31777265 None:intergenic 30.0%
ATGTGGCTAAAGAAAACATA+CGG + chr8.1:31777166-31777185 MS.gene44228:CDS 30.0%
ATTAGGATCAAGTCATATGA+AGG - chr8.1:31781343-31781362 None:intergenic 30.0%
ATTTCTTGCAAATATGAGGT+TGG + chr8.1:31778225-31778244 MS.gene44228:intron 30.0%
CAACAACAATGACAAATGTT+GGG - chr8.1:31780568-31780587 None:intergenic 30.0%
CAGAAAAGTAACTGCTTATT+AGG + chr8.1:31781001-31781020 MS.gene44228:CDS 30.0%
CCAAGATGTTATTGAGTAAA+TGG - chr8.1:31778485-31778504 None:intergenic 30.0%
CCATTTACTCAATAACATCT+TGG + chr8.1:31778482-31778501 MS.gene44228:CDS 30.0%
CTAATCTTAACTCTGTCAAA+TGG + chr8.1:31779064-31779083 MS.gene44228:intron 30.0%
GATAACGAAGTAATAAGAGA+GGG + chr8.1:31777139-31777158 MS.gene44228:CDS 30.0%
GATGTTATATGGATGAGTAA+GGG + chr8.1:31777365-31777384 MS.gene44228:intron 30.0%
GGTCTCATTATATGAAAGAT+CGG - chr8.1:31776681-31776700 None:intergenic 30.0%
TAACATCTTGGATATAAGCA+AGG + chr8.1:31778494-31778513 MS.gene44228:CDS 30.0%
TCAACAACAATGACAAATGT+TGG - chr8.1:31780569-31780588 None:intergenic 30.0%
TCACTATCACCATAAGAATT+TGG - chr8.1:31779132-31779151 None:intergenic 30.0%
TCTAAGTGGTTACAGAAAAA+CGG + chr8.1:31780383-31780402 MS.gene44228:CDS 30.0%
TTAGGATCAAGTCATATGAA+GGG - chr8.1:31781342-31781361 None:intergenic 30.0%
TTATTAGAAGAATCCCAAAC+CGG - chr8.1:31776926-31776945 None:intergenic 30.0%
TTCATATGACTTGATCCTAA+TGG + chr8.1:31781342-31781361 MS.gene44228:CDS 30.0%
TTCATATGCTGCAAATGAAT+TGG - chr8.1:31776702-31776721 None:intergenic 30.0%
! AAGTTATTCTAGAGAGCTTA+TGG - chr8.1:31777505-31777524 None:intergenic 30.0%
! AATTTAGAATTCAAACCCTC+CGG - chr8.1:31780521-31780540 None:intergenic 30.0%
! ACTCATATTCGTTGATAAGT+GGG + chr8.1:31775884-31775903 MS.gene44228:intron 30.0%
! CATACCAAGAAAGCATATAA+TGG + chr8.1:31778009-31778028 MS.gene44228:CDS 30.0%
! CTTAAACCTTTTCTCATTTC+AGG + chr8.1:31779684-31779703 MS.gene44228:intron 30.0%
! GATGTTTTCATAAGTTATCC+TGG - chr8.1:31777712-31777731 None:intergenic 30.0%
! GATTTGACACTTCTTATTTC+AGG - chr8.1:31780314-31780333 None:intergenic 30.0%
! TACCAAGAAAGCATATAATG+GGG + chr8.1:31778011-31778030 MS.gene44228:CDS 30.0%
! TGATAACGAAGTAATAAGAG+AGG + chr8.1:31777138-31777157 MS.gene44228:CDS 30.0%
! TTTTGCTAACAATAACCTAG+TGG + chr8.1:31780233-31780252 MS.gene44228:CDS 30.0%
!! AACTAGTTGATAAGCATAGT+GGG + chr8.1:31777008-31777027 MS.gene44228:CDS 30.0%
!! AAGAAGTGTTTATCCAAACA+AGG - chr8.1:31781421-31781440 None:intergenic 30.0%
!! AGGATTAAGTAATGGATACA+TGG + chr8.1:31781021-31781040 MS.gene44228:CDS 30.0%
!! AGTTAAGATTAGTCTTCCAT+CGG - chr8.1:31779056-31779075 None:intergenic 30.0%
!! CAGAATAACCAATGTTTTGA+AGG - chr8.1:31778053-31778072 None:intergenic 30.0%
!! GCCATTATTTTGCTATATGT+AGG + chr8.1:31776159-31776178 MS.gene44228:intron 30.0%
!! TATTTTGGAAGACGTCATAA+AGG + chr8.1:31780778-31780797 MS.gene44228:CDS 30.0%
!! TGATAGTGAAAATTTTACCC+TGG + chr8.1:31779143-31779162 MS.gene44228:CDS 30.0%
!! TGCATTTTGATATTGACAGA+TGG + chr8.1:31778112-31778131 MS.gene44228:CDS 30.0%
!!! AAGGAAGCTTTTTCAAGATT+AGG - chr8.1:31777273-31777292 None:intergenic 30.0%
!!! CTAATAAGCAGTTACTTTTC+TGG - chr8.1:31781003-31781022 None:intergenic 30.0%
!!! TCCCATTTTTTCAAGCATTA+TGG - chr8.1:31781212-31781231 None:intergenic 30.0%
AACACAGAATCCCATTTACT+CGG - chr8.1:31779481-31779500 None:intergenic 35.0%
AAGAAAATTCCACAAGGATG+TGG + chr8.1:31775628-31775647 MS.gene44228:CDS 35.0%
AATAAAGCAGATGCCAAAGA+TGG + chr8.1:31781480-31781499 MS.gene44228:intron 35.0%
AATGGAAAGAAGTCTCTTGA+AGG + chr8.1:31781136-31781155 MS.gene44228:CDS 35.0%
ACAACTGCACTTTATAGTGT+AGG + chr8.1:31776971-31776990 MS.gene44228:CDS 35.0%
ACAATGACAAATGTTGGGTT+TGG - chr8.1:31780563-31780582 None:intergenic 35.0%
ACAGATGTATGAATCCATGA+GGG + chr8.1:31776532-31776551 MS.gene44228:intron 35.0%
ACTCGATAACTGTCAAGTAT+AGG + chr8.1:31776594-31776613 MS.gene44228:CDS 35.0%
AGCATTTCATAGAGACTTGA+AGG + chr8.1:31776631-31776650 MS.gene44228:CDS 35.0%
AGCCAAACTATTTAGAGACT+TGG - chr8.1:31776251-31776270 None:intergenic 35.0%
AGTGAAACAAGTAGGATTAG+TGG + chr8.1:31781097-31781116 MS.gene44228:CDS 35.0%
ATAATCGCATTAGTGTTCCT+GGG - chr8.1:31780161-31780180 None:intergenic 35.0%
ATGATATGCCAAAGCTAGTT+CGG + chr8.1:31778856-31778875 MS.gene44228:CDS 35.0%
ATGTATTTGACCTCTCAAGA+GGG + chr8.1:31777034-31777053 MS.gene44228:CDS 35.0%
ATTAACTGACCATGATTGCT+AGG - chr8.1:31775721-31775740 None:intergenic 35.0%
ATTGAGTAAATGGAGCAATG+CGG - chr8.1:31778475-31778494 None:intergenic 35.0%
ATTGTGTTTCTTTCAACACC+AGG - chr8.1:31781292-31781311 None:intergenic 35.0%
CAACTGCACTTTATAGTGTA+GGG + chr8.1:31776972-31776991 MS.gene44228:CDS 35.0%
CGATGTTATATGGATGAGTA+AGG + chr8.1:31777364-31777383 MS.gene44228:intron 35.0%
CTAAAGGTAGTGAAACAAGT+AGG + chr8.1:31781089-31781108 MS.gene44228:CDS 35.0%
GAAGACTCAATAAGTATAGC+TGG + chr8.1:31776815-31776834 MS.gene44228:CDS 35.0%
GAAGCCAAATGTTTAGAAGT+GGG + chr8.1:31781601-31781620 MS.gene44228:CDS 35.0%
GAATAGATTTGCACCTTGTT+TGG + chr8.1:31781405-31781424 MS.gene44228:intron 35.0%
GACATTGAGTAGTTGAATAC+TGG - chr8.1:31775667-31775686 None:intergenic 35.0%
GATGAGTAAGAAACTTGTAG+AGG - chr8.1:31778819-31778838 None:intergenic 35.0%
GCAAAAGGTGAAGATTCTAA+AGG + chr8.1:31781073-31781092 MS.gene44228:CDS 35.0%
GCAAGGTGATATATAAGCTA+AGG + chr8.1:31778511-31778530 MS.gene44228:intron 35.0%
GCCAATTTCTTGCAAATATG+AGG + chr8.1:31778221-31778240 MS.gene44228:CDS 35.0%
GCCGATTAATCCAACAAAAT+TGG - chr8.1:31776141-31776160 None:intergenic 35.0%
GCTATACTTATTGAGTCTTC+GGG - chr8.1:31776815-31776834 None:intergenic 35.0%
GGTTCAAGTAAAGCTATGAA+TGG + chr8.1:31781118-31781137 MS.gene44228:CDS 35.0%
GTTATGCTAGCTATCTTGAT+TGG + chr8.1:31776181-31776200 MS.gene44228:CDS 35.0%
TAGACTAGTGTCCAAAACAT+GGG - chr8.1:31779395-31779414 None:intergenic 35.0%
TAGACTTGAGCACAGATATA+TGG + chr8.1:31780600-31780619 MS.gene44228:CDS 35.0%
TATAATCGCATTAGTGTTCC+TGG - chr8.1:31780162-31780181 None:intergenic 35.0%
TATAGCAAACACTTCGTTGT+CGG + chr8.1:31775984-31776003 MS.gene44228:intron 35.0%
TATGTATTTGACCTCTCAAG+AGG + chr8.1:31777033-31777052 MS.gene44228:CDS 35.0%
TCAAGTCTCTATGAAATGCT+TGG - chr8.1:31776631-31776650 None:intergenic 35.0%
TCACTGTGTATTATCGTCAT+TGG + chr8.1:31778082-31778101 MS.gene44228:CDS 35.0%
TCATGGATTCATACATCTGT+GGG - chr8.1:31776532-31776551 None:intergenic 35.0%
TCCATCAGCTTAAAGTCAAT+TGG - chr8.1:31781649-31781668 None:intergenic 35.0%
TCTAATCTTGTAACTGCCAA+TGG + chr8.1:31780929-31780948 MS.gene44228:CDS 35.0%
TCTCTTTGTGAGTGAAAGAA+TGG - chr8.1:31781677-31781696 None:intergenic 35.0%
TCTTTGTGAAATGCCATGTT+AGG - chr8.1:31776219-31776238 None:intergenic 35.0%
TGAAAGAGCCTTCAAAACAT+TGG + chr8.1:31778042-31778061 MS.gene44228:CDS 35.0%
TGAAGCCAAATGTTTAGAAG+TGG + chr8.1:31781600-31781619 MS.gene44228:CDS 35.0%
TGTGGCTAAAGAAAACATAC+GGG + chr8.1:31777167-31777186 MS.gene44228:CDS 35.0%
TGTTAGCTGCAGTTACAATA+TGG + chr8.1:31775780-31775799 MS.gene44228:intron 35.0%
TTACAGGTTAATAAGATGGG+TGG + chr8.1:31780108-31780127 MS.gene44228:intron 35.0%
TTGAGGATCAACTTGTAAAC+TGG + chr8.1:31775914-31775933 MS.gene44228:intron 35.0%
TTGATACTAGAAAAGAGCCA+CGG + chr8.1:31775835-31775854 MS.gene44228:intron 35.0%
! AAAAGTCTTTTGAATGCCAC+TGG + chr8.1:31779643-31779662 MS.gene44228:intron 35.0%
! ACCAAGAAAGCATATAATGG+GGG + chr8.1:31778012-31778031 MS.gene44228:CDS 35.0%
! ACCAATTGACTTTAAGCTGA+TGG + chr8.1:31781645-31781664 MS.gene44228:CDS 35.0%
! ATTGAAAACTGTCCCTTTTG+TGG + chr8.1:31779322-31779341 MS.gene44228:intron 35.0%
! ATTGACAGATGGAGTATCAA+AGG + chr8.1:31778123-31778142 MS.gene44228:CDS 35.0%
! GACTCATATTCGTTGATAAG+TGG + chr8.1:31775883-31775902 MS.gene44228:intron 35.0%
! GCTCTTCATAGCATTTTCTT+TGG + chr8.1:31778323-31778342 MS.gene44228:intron 35.0%
! GGTTCTGACATATCTGAAAT+TGG + chr8.1:31780902-31780921 MS.gene44228:CDS 35.0%
! TTCTCTTTGTTTGTCTCCAT+TGG - chr8.1:31780948-31780967 None:intergenic 35.0%
!! AAAAGCATTGTTGCAGTTGT+GGG + chr8.1:31776944-31776963 MS.gene44228:CDS 35.0%
!! AAGAAGTGTCAAATCAATGC+AGG + chr8.1:31780319-31780338 MS.gene44228:intron 35.0%
!! GAACTAGTTGATAAGCATAG+TGG + chr8.1:31777007-31777026 MS.gene44228:CDS 35.0%
!! GTTCTCATGTTGCTTCATTT+TGG - chr8.1:31779199-31779218 None:intergenic 35.0%
!! TAAAAGCATTGTTGCAGTTG+TGG + chr8.1:31776943-31776962 MS.gene44228:CDS 35.0%
!! TGTTGCTTCATTTTGGTCTT+CGG - chr8.1:31779192-31779211 None:intergenic 35.0%
!!! ATGATTTGCTTCCCATGTTT+TGG + chr8.1:31779381-31779400 MS.gene44228:intron 35.0%
!!! GCTATTTTTCTTCCAACAAG+TGG - chr8.1:31775594-31775613 None:intergenic 35.0%
!!! TGATCTTATTTTAGCGCAGT+AGG + chr8.1:31779981-31780000 MS.gene44228:intron 35.0%
AAAAGAGCCACGGTTATTGA+AGG + chr8.1:31775845-31775864 MS.gene44228:intron 40.0%
AACGGAATTCTTACTCACCA+AGG - chr8.1:31779747-31779766 None:intergenic 40.0%
AATGTTCCACATCCTCAAGA+TGG - chr8.1:31776305-31776324 None:intergenic 40.0%
ACACAGAATCCCATTTACTC+GGG - chr8.1:31779480-31779499 None:intergenic 40.0%
ACACGAAACTGTAATGCCAT+CGG - chr8.1:31778292-31778311 None:intergenic 40.0%
AGAAGTCTCTTGAAGGTTTG+AGG + chr8.1:31781143-31781162 MS.gene44228:CDS 40.0%
AGGCAGAAGAAAATTCCACA+AGG + chr8.1:31775622-31775641 MS.gene44228:CDS 40.0%
AGTCAAATTCTGCCTCTTCT+AGG - chr8.1:31778669-31778688 None:intergenic 40.0%
AGTCTGTTTGACGGAATTGA+TGG + chr8.1:31777437-31777456 MS.gene44228:intron 40.0%
ATAGCAACAAGTCTGCGATT+TGG + chr8.1:31776729-31776748 MS.gene44228:CDS 40.0%
ATCAAAAACGTGCATGCACT+TGG - chr8.1:31775552-31775571 None:intergenic 40.0%
ATGTTCCACATCCTCAAGAT+GGG - chr8.1:31776304-31776323 None:intergenic 40.0%
CAAATGTTTAGAAGTGGGCA+TGG + chr8.1:31781606-31781625 MS.gene44228:CDS 40.0%
CACAGATGTATGAATCCATG+AGG + chr8.1:31776531-31776550 MS.gene44228:intron 40.0%
CACATACCTGACAATCCATT+AGG - chr8.1:31781360-31781379 None:intergenic 40.0%
CACTAATCCTTCAATAACCG+TGG - chr8.1:31775855-31775874 None:intergenic 40.0%
CATGCCCACTTCTAAACATT+TGG - chr8.1:31781608-31781627 None:intergenic 40.0%
CTAGACTAGTGTCCAAAACA+TGG - chr8.1:31779396-31779415 None:intergenic 40.0%
CTCATGGATTCATACATCTG+TGG - chr8.1:31776533-31776552 None:intergenic 40.0%
CTTATTTCAGTAAGCTCTCC+AGG + chr8.1:31777691-31777710 MS.gene44228:intron 40.0%
GAACAACTTGATCCTGTCAA+TGG + chr8.1:31776758-31776777 MS.gene44228:CDS 40.0%
GACTTGACAATGTTGTTCTG+TGG - chr8.1:31780211-31780230 None:intergenic 40.0%
GAGTATGTTATCAGAAGCCA+CGG + chr8.1:31776370-31776389 MS.gene44228:CDS 40.0%
GTCTACTCACTATCCTAACA+TGG + chr8.1:31776203-31776222 MS.gene44228:CDS 40.0%
TACAGCAGTAATTCAAAGGG+TGG + chr8.1:31781183-31781202 MS.gene44228:CDS 40.0%
TAGTGTAGGGCAGTTAATGA+AGG + chr8.1:31776985-31777004 MS.gene44228:CDS 40.0%
TATAGCACATAGGTGGAATC+TGG + chr8.1:31778634-31778653 MS.gene44228:intron 40.0%
TCCATGCCTGAAATGAGAAA+AGG - chr8.1:31779693-31779712 None:intergenic 40.0%
TCCCCCATTATATGCTTTCT+TGG - chr8.1:31778016-31778035 None:intergenic 40.0%
TCCTCTCAGAATAATGTGAC+CGG - chr8.1:31779097-31779116 None:intergenic 40.0%
TCTGTCAAATGGTTTACAGC+CGG + chr8.1:31779075-31779094 MS.gene44228:intron 40.0%
TCTTCATGAACCTCATGACT+TGG - chr8.1:31777205-31777224 None:intergenic 40.0%
TCTTTGCATTGTCAGATCCT+TGG + chr8.1:31779727-31779746 MS.gene44228:CDS 40.0%
TGATATGCCAAAGCTAGTTC+GGG + chr8.1:31778857-31778876 MS.gene44228:CDS 40.0%
TGCATTACAGTCATGAACTG+AGG + chr8.1:31778346-31778365 MS.gene44228:intron 40.0%
TGGAAAACTTGTCCTAGAAG+AGG + chr8.1:31778654-31778673 MS.gene44228:CDS 40.0%
TGTAAGTAGAGGGTCATTTG+TGG - chr8.1:31777077-31777096 None:intergenic 40.0%
TTATATGGATGAGTAAGGGC+CGG + chr8.1:31777369-31777388 MS.gene44228:intron 40.0%
TTGTTTATCCAAACAAGCCC+AGG + chr8.1:31777886-31777905 MS.gene44228:intron 40.0%
! AAGAAAGCATATAATGGGGG+AGG + chr8.1:31778015-31778034 MS.gene44228:CDS 40.0%
! ACCTTTTCTCATTTCAGGCA+TGG + chr8.1:31779689-31779708 MS.gene44228:intron 40.0%
! ACTTTGGAAGGGAACTTGAA+GGG + chr8.1:31778686-31778705 MS.gene44228:CDS 40.0%
! AGGCAGAATTTGACTTTGGA+AGG + chr8.1:31778674-31778693 MS.gene44228:CDS 40.0%
! AGTATTTGACAGAAGAGTGC+AGG + chr8.1:31779784-31779803 MS.gene44228:intron 40.0%
! CTTCTTTTTCCACATCCTTG+TGG - chr8.1:31775640-31775659 None:intergenic 40.0%
! GAAGAGGCAGAATTTGACTT+TGG + chr8.1:31778670-31778689 MS.gene44228:CDS 40.0%
! GGCAGAATTTGACTTTGGAA+GGG + chr8.1:31778675-31778694 MS.gene44228:CDS 40.0%
! GTCACATTATTCTGAGAGGA+TGG + chr8.1:31779097-31779116 MS.gene44228:CDS 40.0%
! TGAGTGCAGTTTTTCCACAA+TGG - chr8.1:31778591-31778610 None:intergenic 40.0%
! TTTTCTCATTTCAGGCATGG+AGG + chr8.1:31779692-31779711 MS.gene44228:intron 40.0%
!! AGGTATTGACCCGAGTAAAT+GGG + chr8.1:31779468-31779487 MS.gene44228:intron 40.0%
!! ATGGAAGCATCTGAATGGAA+TGG + chr8.1:31780416-31780435 MS.gene44228:CDS 40.0%
!! ATTAAGCACTGAAACTCCGA+TGG + chr8.1:31779037-31779056 MS.gene44228:intron 40.0%
!! CTTGATCCTAATGGATTGTC+AGG + chr8.1:31781351-31781370 MS.gene44228:CDS 40.0%
!! CTTTTCTGGTATAGTGACGA+TGG - chr8.1:31780989-31781008 None:intergenic 40.0%
!! TAGGTATTGACCCGAGTAAA+TGG + chr8.1:31779467-31779486 MS.gene44228:intron 40.0%
!! TCAACAGCCATTTTAAGCTC+AGG - chr8.1:31777115-31777134 None:intergenic 40.0%
!! TCACTATGGAAGCATCTGAA+TGG + chr8.1:31780411-31780430 MS.gene44228:CDS 40.0%
!! TTCTGTGTTTTGCCACTTGT+TGG + chr8.1:31775579-31775598 MS.gene44228:CDS 40.0%
AACCACGAAGACACTGTAGT+AGG - chr8.1:31775696-31775715 None:intergenic 45.0%
AAGCAAATAGCCCTCTTGAG+AGG - chr8.1:31777047-31777066 None:intergenic 45.0%
AAGCAGATGCCAAAGATGGA+TGG + chr8.1:31781484-31781503 MS.gene44228:intron 45.0%
AATCCGATTACTGCTGCCAT+CGG - chr8.1:31778375-31778394 None:intergenic 45.0%
ACGCGAGAGCGAAATTTGTA+TGG + chr8.1:31780654-31780673 MS.gene44228:CDS 45.0%
ACTTCGTTGTCGGAGATGTA+AGG + chr8.1:31775994-31776013 MS.gene44228:intron 45.0%
AGGTGATACTACTCACCACT+AGG - chr8.1:31780251-31780270 None:intergenic 45.0%
AGTGGTGAGTAGTATCACCT+TGG + chr8.1:31780251-31780270 MS.gene44228:intron 45.0%
ATCCTACTACAGTGTCTTCG+TGG + chr8.1:31775691-31775710 MS.gene44228:CDS 45.0%
ATGGGATTCTGTGCATCTGT+AGG + chr8.1:31779448-31779467 MS.gene44228:intron 45.0%
ATTGTCAAAAAGGAAGGCCC+AGG + chr8.1:31780141-31780160 MS.gene44228:CDS 45.0%
CAATTTCCCTCCAAGTCATG+AGG + chr8.1:31777192-31777211 MS.gene44228:CDS 45.0%
CACTCAAGCAGAAAGAGTTG+AGG + chr8.1:31776402-31776421 MS.gene44228:CDS 45.0%
CAGGTACTTCTTGCACTACA+TGG + chr8.1:31780338-31780357 MS.gene44228:intron 45.0%
CCTGTCAATGGCGAGAAAAT+TGG + chr8.1:31776770-31776789 MS.gene44228:CDS 45.0%
GACAATGCAAAGACCAAGAC+CGG - chr8.1:31779720-31779739 None:intergenic 45.0%
GAGCACTCATGAGACTGTTT+AGG + chr8.1:31777622-31777641 MS.gene44228:intron 45.0%
GATAAGTGGGAAGACACTTG+AGG + chr8.1:31775897-31775916 MS.gene44228:intron 45.0%
GATATGCCAAAGCTAGTTCG+GGG + chr8.1:31778858-31778877 MS.gene44228:CDS 45.0%
GCCAAAGATGGATGGATATG+AGG + chr8.1:31781492-31781511 MS.gene44228:CDS 45.0%
GCCTCATATCCATCCATCTT+TGG - chr8.1:31781496-31781515 None:intergenic 45.0%
GGCAATGCTGCTGAAAGTAA+CGG - chr8.1:31776905-31776924 None:intergenic 45.0%
GTCGGAGATGTAAGGACAAT+AGG + chr8.1:31776002-31776021 MS.gene44228:intron 45.0%
TAAGAGCGACGATTGGAATG+TGG - chr8.1:31781558-31781577 None:intergenic 45.0%
TAATAAGAGAGGGAGCGATG+TGG + chr8.1:31777149-31777168 MS.gene44228:CDS 45.0%
TATTACACCCACCTGCACAA+AGG - chr8.1:31777987-31778006 None:intergenic 45.0%
TCACCTCGAAGCAAGAAGAA+AGG + chr8.1:31778174-31778193 MS.gene44228:CDS 45.0%
! ACACGTGCTAGTCTGTTTGA+CGG + chr8.1:31777428-31777447 MS.gene44228:intron 45.0%
! ATTTGTGTCCTGGGCTTGTT+TGG - chr8.1:31777897-31777916 None:intergenic 45.0%
! CATGAACCTCATGACTTGGA+GGG - chr8.1:31777201-31777220 None:intergenic 45.0%
! CCAATTTTCTCGCCATTGAC+AGG - chr8.1:31776773-31776792 None:intergenic 45.0%
! GACTTTGGAAGGGAACTTGA+AGG + chr8.1:31778685-31778704 MS.gene44228:CDS 45.0%
! GTTACTTTCAGCAGCATTGC+CGG + chr8.1:31776904-31776923 MS.gene44228:CDS 45.0%
! TCATGAACCTCATGACTTGG+AGG - chr8.1:31777202-31777221 None:intergenic 45.0%
! TGACAGGATCAAGTTGTTCC+CGG - chr8.1:31776757-31776776 None:intergenic 45.0%
! TGGTTTGAAGTTGACGACAC+AGG + chr8.1:31779261-31779280 MS.gene44228:CDS 45.0%
! TGTGATGTTGCAAGCTCTGA+TGG + chr8.1:31780881-31780900 MS.gene44228:CDS 45.0%
!! ACAAGTCTGCGATTTGGTAC+CGG + chr8.1:31776735-31776754 MS.gene44228:CDS 45.0%
AACGTCCCATCTTGAGGATG+TGG + chr8.1:31776296-31776315 MS.gene44228:CDS 50.0%
AAGACGGAGCTTCGCAAGAA+AGG + chr8.1:31780707-31780726 MS.gene44228:CDS 50.0%
AAGCTCCGTCTTTGCGGTAT+TGG - chr8.1:31780699-31780718 None:intergenic 50.0%
AATCCATGAGGGCTGTCACA+TGG + chr8.1:31776543-31776562 MS.gene44228:CDS 50.0%
ACACCGATGGCAGCAGTAAT+CGG + chr8.1:31778369-31778388 MS.gene44228:CDS 50.0%
ACCCTGGAGCAGAAGCAATT+CGG + chr8.1:31779159-31779178 MS.gene44228:CDS 50.0%
AGCTTCATGGCACGTTTCTG+TGG + chr8.1:31776862-31776881 MS.gene44228:CDS 50.0%
AGGTTCATGAAGAGAACGCC+AGG + chr8.1:31777212-31777231 MS.gene44228:CDS 50.0%
ATATTGCTGGTGACCTAGCC+TGG - chr8.1:31777233-31777252 None:intergenic 50.0%
ATCAGAAGCCACGGTAACCA+AGG + chr8.1:31776379-31776398 MS.gene44228:CDS 50.0%
ATCCATGAGGGCTGTCACAT+GGG + chr8.1:31776544-31776563 MS.gene44228:CDS 50.0%
ATCCGAATTGCTTCTGCTCC+AGG - chr8.1:31779164-31779183 None:intergenic 50.0%
CCTCGAAGCAAGAAGAAAGG+CGG + chr8.1:31778177-31778196 MS.gene44228:CDS 50.0%
CTCGTCCAATACCGCAAAGA+CGG + chr8.1:31780691-31780710 MS.gene44228:CDS 50.0%
CTCTCGCGTAGTACTTGTGA+AGG - chr8.1:31780643-31780662 None:intergenic 50.0%
CTCTTTCTGCTTGAGTGCCT+TGG - chr8.1:31776399-31776418 None:intergenic 50.0%
GAAAAACGGCGTGGTCACTA+TGG + chr8.1:31780397-31780416 MS.gene44228:CDS 50.0%
GCCGGTCACATTATTCTGAG+AGG + chr8.1:31779093-31779112 MS.gene44228:intron 50.0%
GCTTCATGGCACGTTTCTGT+GGG + chr8.1:31776863-31776882 MS.gene44228:CDS 50.0%
GGCTTAACCTTTGTGCAGGT+GGG + chr8.1:31777977-31777996 MS.gene44228:intron 50.0%
GTGAACTCAGTGCAGTTCCA+AGG - chr8.1:31780271-31780290 None:intergenic 50.0%
GTGGTTACAGAAAAACGGCG+TGG + chr8.1:31780388-31780407 MS.gene44228:CDS 50.0%
GTTGCAGAAGTTCGTAACGC+AGG - chr8.1:31776279-31776298 None:intergenic 50.0%
TACCTGACGGTGTAGCTTCA+TGG + chr8.1:31776849-31776868 MS.gene44228:CDS 50.0%
TCATGAACTGAGGACACCGA+TGG + chr8.1:31778356-31778375 MS.gene44228:CDS 50.0%
TCCGAATTGCTTCTGCTCCA+GGG - chr8.1:31779163-31779182 None:intergenic 50.0%
TGAGCTGTAAGAGCGACGAT+TGG - chr8.1:31781565-31781584 None:intergenic 50.0%
TGATGCTCACTTTCCAGCTC+CGG + chr8.1:31780499-31780518 MS.gene44228:CDS 50.0%
TGGCTTAACCTTTGTGCAGG+TGG + chr8.1:31777976-31777995 MS.gene44228:intron 50.0%
TGTTGTTCTGTGGCATCCAC+AGG - chr8.1:31780201-31780220 None:intergenic 50.0%
TTCTGCAACGTCCCATCTTG+AGG + chr8.1:31776290-31776309 MS.gene44228:CDS 50.0%
! CAGGCAGTGGATGCTCTAAA+TGG + chr8.1:31781262-31781281 MS.gene44228:CDS 50.0%
! GAATCTCCCCGAACTAGCTT+TGG - chr8.1:31778867-31778886 None:intergenic 50.0%
! GATGCTCTAAATGGCATGCC+TGG + chr8.1:31781271-31781290 MS.gene44228:CDS 50.0%
! TGCCACTGGCTGAAGATACA+CGG + chr8.1:31779657-31779676 MS.gene44228:intron 50.0%
! TTGCGGTATTGGACGAGTCA+TGG - chr8.1:31780688-31780707 None:intergenic 50.0%
! TTTCAGCAGCATTGCCGGTT+TGG + chr8.1:31776909-31776928 MS.gene44228:CDS 50.0%
!! CAAGTCTGCGATTTGGTACC+GGG + chr8.1:31776736-31776755 MS.gene44228:CDS 50.0%
!! GGTTGGCTTAACCTTTGTGC+AGG + chr8.1:31777973-31777992 MS.gene44228:intron 50.0%
!! TTCAGCAGCATTGCCGGTTT+GGG + chr8.1:31776910-31776929 MS.gene44228:CDS 50.0%
ACCGTTGTTGCTGTAGGCGA+CGG + chr8.1:31781235-31781254 MS.gene44228:CDS 55.0%
CACCGTCAGGTACTTGAGAC+AGG - chr8.1:31776841-31776860 None:intergenic 55.0%
CATGAAGAGAACGCCAGGCT+AGG + chr8.1:31777217-31777236 MS.gene44228:CDS 55.0%
CATGCGACTAACTGCACCTG+TGG + chr8.1:31780182-31780201 MS.gene44228:CDS 55.0%
CCGCCTTTCTTCTTGCTTCG+AGG - chr8.1:31778180-31778199 None:intergenic 55.0%
CGAAGCAAGAAGAAAGGCGG+AGG + chr8.1:31778180-31778199 MS.gene44228:CDS 55.0%
CGTGGTTCGCCTAGCAATCA+TGG + chr8.1:31775709-31775728 MS.gene44228:CDS 55.0%
CTCCGTGTATCTTCAGCCAG+TGG - chr8.1:31779662-31779681 None:intergenic 55.0%
CTTGAGTGCCTTGGTTACCG+TGG - chr8.1:31776390-31776409 None:intergenic 55.0%
CTTGCGAAGCTCCGTCTTTG+CGG - chr8.1:31780705-31780724 None:intergenic 55.0%
GAAGTTGACGACACAGGCTG+TGG + chr8.1:31779267-31779286 MS.gene44228:CDS 55.0%
GAATTCAAACCCTCCGGAGC+TGG - chr8.1:31780515-31780534 None:intergenic 55.0%
GGCCTGTCTCAAGTACCTGA+CGG + chr8.1:31776836-31776855 MS.gene44228:CDS 55.0%
TCCGTCGCCTACAGCAACAA+CGG - chr8.1:31781239-31781258 None:intergenic 55.0%
TGCCATGAAGCTACACCGTC+AGG - chr8.1:31776854-31776873 None:intergenic 55.0%
! CATTTCAGGCATGGAGGCAC+CGG + chr8.1:31779698-31779717 MS.gene44228:intron 55.0%
GCTCACTTTCCAGCTCCGGA+GGG + chr8.1:31780503-31780522 MS.gene44228:CDS 60.0%
GGAGCCACCGTTGTTGCTGT+AGG + chr8.1:31781229-31781248 MS.gene44228:CDS 60.0%
GTCGCCTACAGCAACAACGG+TGG - chr8.1:31781236-31781255 None:intergenic 60.0%
TCGGGGAGATTCTGCGAGAG+TGG + chr8.1:31778875-31778894 MS.gene44228:CDS 60.0%
TGCCCATGTGACAGCCCTCA+TGG - chr8.1:31776549-31776568 None:intergenic 60.0%
TGCTCACTTTCCAGCTCCGG+AGG + chr8.1:31780502-31780521 MS.gene44228:CDS 60.0%
TGCTGTAGGCGACGGACAAC+AGG + chr8.1:31781243-31781262 MS.gene44228:CDS 60.0%
AGGCGACGGACAACAGGCAG+TGG + chr8.1:31781249-31781268 MS.gene44228:CDS 65.0%
!! AGGCATGGAGGCACCGGTCT+TGG + chr8.1:31779704-31779723 MS.gene44228:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 31775542 31781714 31775542 ID=MS.gene44228
chr8.1 mRNA 31775542 31781714 31775542 ID=MS.gene44228.t1;Parent=MS.gene44228
chr8.1 exon 31775542 31775730 31775542 ID=MS.gene44228.t1.exon1;Parent=MS.gene44228.t1
chr8.1 CDS 31775542 31775730 31775542 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31776181 31776423 31776181 ID=MS.gene44228.t1.exon2;Parent=MS.gene44228.t1
chr8.1 CDS 31776181 31776423 31776181 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31776536 31777294 31776536 ID=MS.gene44228.t1.exon3;Parent=MS.gene44228.t1
chr8.1 CDS 31776536 31777294 31776536 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31777995 31778242 31777995 ID=MS.gene44228.t1.exon4;Parent=MS.gene44228.t1
chr8.1 CDS 31777995 31778242 31777995 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31778356 31778515 31778356 ID=MS.gene44228.t1.exon5;Parent=MS.gene44228.t1
chr8.1 CDS 31778356 31778515 31778356 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31778646 31778772 31778646 ID=MS.gene44228.t1.exon6;Parent=MS.gene44228.t1
chr8.1 CDS 31778646 31778772 31778646 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31778856 31778945 31778856 ID=MS.gene44228.t1.exon7;Parent=MS.gene44228.t1
chr8.1 CDS 31778856 31778945 31778856 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31779094 31779288 31779094 ID=MS.gene44228.t1.exon8;Parent=MS.gene44228.t1
chr8.1 CDS 31779094 31779288 31779094 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31779470 31779539 31779470 ID=MS.gene44228.t1.exon9;Parent=MS.gene44228.t1
chr8.1 CDS 31779470 31779539 31779470 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31779706 31779748 31779706 ID=MS.gene44228.t1.exon10;Parent=MS.gene44228.t1
chr8.1 CDS 31779706 31779748 31779706 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31780114 31780254 31780114 ID=MS.gene44228.t1.exon11;Parent=MS.gene44228.t1
chr8.1 CDS 31780114 31780254 31780114 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31780341 31781372 31780341 ID=MS.gene44228.t1.exon12;Parent=MS.gene44228.t1
chr8.1 CDS 31780341 31781372 31780341 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
chr8.1 exon 31781490 31781714 31781490 ID=MS.gene44228.t1.exon13;Parent=MS.gene44228.t1
chr8.1 CDS 31781490 31781714 31781490 ID=cds.MS.gene44228.t1;Parent=MS.gene44228.t1
Gene Sequence

>MS.gene44228

ATGGCTACCAAGTGCATGCACGTTTTTGATAGATTGCTTCTGTGTTTTGCCACTTGTTGGAAGAAAAATAGCACACTAACAGGCAGAAGAAAATTCCACAAGGATGTGGAAAAAGAAGAATTCCAGTATTCAACTACTCAATGTCTCTCATCCTACTACAGTGTCTTCGTGGTTCGCCTAGCAATCATGGTCAGTTAATTTTTTCCTTATATGATGTTACAATTTTGAATTTTATTAGTGTTAGCTGCAGTTACAATATGGTTTATGTGCTTCGAGATATTCATTCATATTTATTGATACTAGAAAAGAGCCACGGTTATTGAAGGATTAGTGTTGAGTATGACTCATATTCGTTGATAAGTGGGAAGACACTTGAGGATCAACTTGTAAACTGGACCGTAGTATTTAAACAAATTTTTGATCAACTTGTTCAATACAAAACTATAGCAAACACTTCGTTGTCGGAGATGTAAGGACAATAGGACGAATTGCGTGATCAATCATTGTGTTTTTGTGCGTTTATCTTCTTACATTAGTACCGGATTTGCTGTTCTAACAATTAGAGTAGACCCTTTGTTGTGAAGATAAATAAATAACCAATTTTGTTGGATTAATCGGCCATTATTTTGCTATATGTAGGTTATGCTAGCTATCTTGATTGGTCTACTCACTATCCTAACATGGCATTTCACAAAGATTTATACAACCAAGTCTCTAAATAGTTTGGCTTACGACCTGCGTTACGAACTTCTGCAACGTCCCATCTTGAGGATGTGGAACATTTTGAACTCTACTGCTGAAATCACAACTGCTCAAGTTAAGTTGTCTGAGTATGTTATCAGAAGCCACGGTAACCAAGGCACTCAAGCAGAAAGAGTTGAGGTTAACTTTTATCTATTCATTGTACTCTTCCTTTGCTATAAGTTAGAATTTAGATTCCATTTTCTTTTAGTGGTTTATTACTTATTTGTATTGTTCCAATTTTTTCCCACAGATGTATGAATCCATGAGGGCTGTCACATGGGCACTATTTGCTAGTCGAAAAGCTCTCAACTCGATAACTGTCAAGTATAGGAATGGTTTTGTCCAAGCATTTCATAGAGACTTGAAGGATAATAATATTTTTTACATCTACACCGATCTTTCATATAATGAGACCAATTCATTTGCAGCATATGAAGACACTCATAGCAACAAGTCTGCGATTTGGTACCGGGAACAACTTGATCCTGTCAATGGCGAGAAAATTGGAAAAGCAATGAAGATTGCACCCGAAGACTCAATAAGTATAGCTGGCCTGTCTCAAGTACCTGACGGTGTAGCTTCATGGCACGTTTCTGTGGGCAAGTTTACAGATTCACCGTTACTTTCAGCAGCATTGCCGGTTTGGGATTCTTCTAATAAAAGCATTGTTGCAGTTGTGGGAGTTACAACTGCACTTTATAGTGTAGGGCAGTTAATGAAGGAACTAGTTGATAAGCATAGTGGGCATATGTATTTGACCTCTCAAGAGGGCTATTTGCTTGCAACTTCCACAAATGACCCTCTACTTACAAATTCAACAAAGAAACCTGAGCTTAAAATGGCTGTTGACTGTGATAACGAAGTAATAAGAGAGGGAGCGATGTGGCTAAAGAAAACATACGGGAACAATTTCCCTCCAAGTCATGAGGTTCATGAAGAGAACGCCAGGCTAGGTCACCAGCAATATTACATTGACTCATTCTTCCTAATCTTGAAAAAGCTTCCTTTGGTACATTTTAAGACACTGCACTTGTTCCTTACATTTGATCTTATTTTTTATATTGCTTTTAAAATTTTACGATGTTATATGGATGAGTAAGGGCCGGTTAAAGTTGACTTATTTGAGCTTTCTACTAGAATTAACACGTGCTAGTCTGTTTGACGGAATTGATGGAAACAACTTATGACATGTGCATAACTTGTTTTCAGTTTATTTCCATAAGCTCTCTAGAATAACTTATGAAATTTAAGAAAACAGTTTAAATTTATCTTATCTTTTGTTATAGAAATATACTAGTTTGTTTGGATTGACTTATTTGAGCTTATCTACTTGCATGAGCACTCATGAGACTGTTTAGGTTAACATATAAAAGTAACTTTTGAAATGTCCATAATCTGTTTTCAGCTTATTTCAGTAAGCTCTCCAGGATAACTTATGAAAACATCTTATAGCTTATACCAAAACAGTTTGACTTTATATTATCTTTTCTTATGGAAATAACTAATAATAACCGCTTATATAAGCTGTTTATCTAAACAAGGTTATAGATTATACATGAGCACTTATACAAAGCGCTTATGCTATAAGCACTTAATTAAGTTGTTTATCCAAACAAGCCCAGGACACAAATTATAAATTTTCTACTTCTATCTTATTTCTGTTTTTTATAATGTATTTATACATTTTGGTTGGCTTAACCTTTGTGCAGGTGGGTGTAATAATCATACCAAGAAAGCATATAATGGGGGAGGCAGATGAAAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCATCACTGTGTATTATCGTCATTGGATGTGTTTGCATTTTGATATTGACAGATGGAGTATCAAAGGAAATGAATCTAAGAGCAGAATTAATCAGTCACCTCGAAGCAAGAAGAAAGGCGGAGGCATCGAGCAACTATAAAAGCCAATTTCTTGCAAATATGAGGTTGGTTTTTCTAGTTCTGTGTGAAAATAGAAAAAATTAAGATACACCGATGGCATTACAGTTTCGTGTTCACAAGTTTTGCTCTTCATAGCATTTTCTTTGGTGCATTACAGTCATGAACTGAGGACACCGATGGCAGCAGTAATCGGATTACTTGACATTCTTTTGTCGGATGATCATCTCACAAATGAACAATGTGCAACCGTTACTCAAATAAGAAAATGTTCAACCGCATTGCTCCATTTACTCAATAACATCTTGGATATAAGCAAGGTGATATATAAGCTAAGGTTTTTTATTTAACAACTTTTAGCCTCATGCTTAGAGAAATTATTTAAAGGAAAACCATTGTGGAAAAACTGCACTCATTCCAAAAAGACGTCTAATATCTTATAGCACATAGGTGGAATCTGGAAAACTTGTCCTAGAAGAGGCAGAATTTGACTTTGGAAGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTGCAATGCATTAACCACAATGTAGAAATTATTTTAGACCTTTCTGGTATGAATCTTATTTTTGGTTGCATAATATAGGTGATTATAAACCTCTACAAGTTTCTTACTCATCTAGTTAGTCTGATACAGATGATATGCCAAAGCTAGTTCGGGGAGATTCTGCGAGAGTGGTTCAAATTTTTGCAAATTTGATCAATAACTCAATCAAATTTACTCTATGTAAGTAAAAAAAAATTGCTTCTAGTTTTGTATACAGTAATGTTCATTAGTATTGTTTTTGAGAAATTCAAAGATTTGTCAAATGGTATCAATTAAGCACTGAAACTCCGATGGAAGACTAATCTTAACTCTGTCAAATGGTTTACAGCCGGTCACATTATTCTGAGAGGATGGTGTGAAAATCCAAATTCTTATGGTGATAGTGAAAATTTTACCCTGGAGCAGAAGCAATTCGGATGTTCTCCGAAGACCAAAATGAAGCAACATGAGAACCATTCAAAGAAGACTTCTAATATTGATAACAAAATGATACTTTGGTTTGAAGTTGACGACACAGGCTGTGGTATGACCAACAAAATTAGTCTAGAAAAATTGCATTGAAAACTGTCCCTTTTGTGGCAAAAGAAAAAAAAAATAGTTTTAGGATAAATTATAATGATTTGCTTCCCATGTTTTGGACACTAGTCTAGAAAAACTGCACTGAAAATTTTCTGTGTTTGAAATGGGATTCTGTGCATCTGTAGGTATTGACCCGAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCTATCAACTACTAGACTGTAAGTGATTTAAATATTTTACAAAAAAACTATACAATTTTGTGAGCTGTTACTTTTGAGCAAACAAATCAGCATTACATTATTCTCTGCTAGTTATTTGCTGAAAAGTCTTTTGAATGCCACTGGCTGAAGATACACGGAGTTCTTAAACCTTTTCTCATTTCAGGCATGGAGGCACCGGTCTTGGTCTTTGCATTGTCAGATCCTTGGTGAGTAAGAATTCCGTTTCATTTGCAAAAGAATAAGTATTTGACAGAAGAGTGCAGGACAAACCTTTAACTAACTAGAGAATTTTTTGTCTTGTATAGTAATTGGTGGGCAATGAACAACACAAACAAAATACTATAAAATTTATTATGATGCGCTTTCAAACTATGTAAAGCATAGACATAAATAGGTGAAGTTTATATCTGTTGCATGTTAACATGAGCAAGAAAATCATGATCTTATTTTAGCGCAGTAGGCTTTTCTTGTTGAGCTCTATAAACTCACTTGCATTTGTTTTTTTTTTCTTCGTAAAGTGACATGAATCTCATAAGTTGTATATTAATTTCATTTTATCTCCTTATTACAGGTTAATAAGATGGGTGGAGAAATCAAGATTGTCAAAAAGGAAGGCCCAGGAACACTAATGCGATTATACATGCGACTAACTGCACCTGTGGATGCCACAGAACAACATTGTCAAGTCAATTTTGCTAACAATAACCTAGTGGTGAGTAGTATCACCTTGGAACTGCACTGAGTTCACTGAAAAGATAATAAGCACACCCTGAAATAAGAAGTGTCAAATCAATGCAGGTACTTCTTGCACTACATGGCAACATGAGTAGATTAATTACATCTAAGTGGTTACAGAAAAACGGCGTGGTCACTATGGAAGCATCTGAATGGAATGGATTAACACAAATTCTGAAAGAACTATTTCGTGCAAATACTTCAACTCATAACGATGACTTTGATGCTCACTTTCCAGCTCCGGAGGGTTTGAATTCTAAATTTATTAGCATACAGGAATTGCCAAACCCAACATTTGTCATTGTTGTTGATATTGATTTACTAGACTTGAGCACAGATATATGGAAAGAACAACTTAACTTCCTTCACAAGTACTACGCGAGAGCGAAATTTGTATGGTTACAAAACCATGACTCGTCCAATACCGCAAAGACGGAGCTTCGCAAGAAAGGACATATATTAACTGTCAACAAACCTCTTTACAAAGCAAAGATGATTCATATTTTGGAAGACGTCATAAAGGAAAGAAACGTTGAAGTACAAAAGAAAAATATGAAAGAGGATGATTTGCATGAGAGTCTTGAGATTGAATATACTCATCATTGTGATGTTGCAAGCTCTGATGGTTCTGACATATCTGAAATTGGTAGTTCTAATCTTGTAACTGCCAATGGAGACAAACAAAGAGAAGAGTTAGTTAGAATCAATCCATCGTCACTATACCAGAAAAGTAACTGCTTATTAGGATTAAGTAATGGATACATGGAACATAAAGAAGCATTTATTTCAACAAGAGCAAAAGGTGAAGATTCTAAAGGTAGTGAAACAAGTAGGATTAGTGGTTCAAGTAAAGCTATGAATGGAAAGAAGTCTCTTGAAGGTTTGAGGATATTGCTTGCAGAAGATACAGCAGTAATTCAAAGGGTGGCAACCATAATGCTTGAAAAAATGGGAGCCACCGTTGTTGCTGTAGGCGACGGACAACAGGCAGTGGATGCTCTAAATGGCATGCCTGGTGTTGAAAGAAACACAATAACATCTCAAACTGAGATTCTAAGTTTCCCTTCATATGACTTGATCCTAATGGATTGTCAGGTATGTGTGTAAAATATGTAATGCTTTACTCTGAATAGATTTGCACCTTGTTTGGATAAACACTTCTTTTTAGTTTGAATTTTCTGATTTCTTTTGTGTGTTTGTGAAATAAAGCAGATGCCAAAGATGGATGGATATGAGGCAACAAAAGAAATAAGGAAATCAGAAATTGGAACTTCATTCCACATTCCAATCGTCGCTCTTACAGCTCATGCAATGTCATGTGATGAAGCCAAATGTTTAGAAGTGGGCATGGATGCTTATTTAACTAAACCAATTGACTTTAAGCTGATGGAGTCTACCATTCTTTCACTCACAAAGAGAGAAACCTTGTCATCTTAA
Protein sequence

>MS.gene44228.t1

MATKCMHVFDRLLLCFATCWKKNSTLTGRRKFHKDVEKEEFQYSTTQCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLNSLAYDLRYELLQRPILRMWNILNSTAEITTAQVKLSEYVIRSHGNQGTQAERVEMYESMRAVTWALFASRKALNSITVKYRNGFVQAFHRDLKDNNIFYIYTDLSYNETNSFAAYEDTHSNKSAIWYREQLDPVNGEKIGKAMKIAPEDSISIAGLSQVPDGVASWHVSVGKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVDKHSGHMYLTSQEGYLLATSTNDPLLTNSTKKPELKMAVDCDNEVIREGAMWLKKTYGNNFPPSHEVHEENARLGHQQYYIDSFFLILKKLPLVGVIIIPRKHIMGEADERAFKTLVILISASLCIIVIGCVCILILTDGVSKEMNLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILLSDDHLTNEQCATVTQIRKCSTALLHLLNNILDISKVESGKLVLEEAEFDFGRELEGLVDMFSVQCINHNVEIILDLSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHIILRGWCENPNSYGDSENFTLEQKQFGCSPKTKMKQHENHSKKTSNIDNKMILWFEVDDTGCGIDPSKWDSVFESFEQADLSTTRLHGGTGLGLCIVRSLVNKMGGEIKIVKKEGPGTLMRLYMRLTAPVDATEQHCQVNFANNNLVVLLALHGNMSRLITSKWLQKNGVVTMEASEWNGLTQILKELFRANTSTHNDDFDAHFPAPEGLNSKFISIQELPNPTFVIVVDIDLLDLSTDIWKEQLNFLHKYYARAKFVWLQNHDSSNTAKTELRKKGHILTVNKPLYKAKMIHILEDVIKERNVEVQKKNMKEDDLHESLEIEYTHHCDVASSDGSDISEIGSSNLVTANGDKQREELVRINPSSLYQKSNCLLGLSNGYMEHKEAFISTRAKGEDSKGSETSRISGSSKAMNGKKSLEGLRILLAEDTAVIQRVATIMLEKMGATVVAVGDGQQAVDALNGMPGVERNTITSQTEILSFPSYDLILMDCQMPKMDGYEATKEIRKSEIGTSFHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMESTILSLTKRETLSS