Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44377.t1 | XP_003613227.1 | 96.6 | 178 | 6 | 0 | 20 | 197 | 1 | 178 | 3.10E-92 | 348.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44377.t1 | Q6NKP9 | 66.3 | 169 | 55 | 1 | 31 | 199 | 2 | 168 | 9.4e-58 | 225.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44377.t1 | G7K1D2 | 96.6 | 178 | 6 | 0 | 20 | 197 | 1 | 178 | 2.2e-92 | 348.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04998 | MS.gene44377 | 0.806636 | 7.47E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene44377 | 0.808606 | 2.85E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene44377 | 0.817844 | 2.67E-52 | -1.69E-46 |
| MS.gene056779 | MS.gene44377 | 0.803249 | 3.81E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene44377 | 0.819642 | 1.04E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene44377 | 0.806152 | 9.45E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene44377 | 0.810277 | 1.25E-50 | -1.69E-46 |
| MS.gene060851 | MS.gene44377 | 0.827404 | 1.59E-54 | -1.69E-46 |
| MS.gene060852 | MS.gene44377 | 0.829554 | 4.82E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 74 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAAAATCAGTTTATATTA+TGG | 0.188868 | 5.1:-25145300 | MS.gene44377:CDS |
| GCGAGGACTTGGTTACTTTA+TGG | 0.241212 | 5.1:+25145255 | None:intergenic |
| GGTTACTTTATGGTCTAAAA+AGG | 0.243770 | 5.1:+25145265 | None:intergenic |
| TTTCCAGTCAATGCGGTTAA+TGG | 0.255071 | 5.1:-25144796 | MS.gene44377:intron |
| GGATCCATCCAACAGGATAA+AGG | 0.336304 | 5.1:+25143868 | None:intergenic |
| TTAGATGCCGATTCCTGCTT+TGG | 0.347374 | 5.1:+25144067 | None:intergenic |
| GACGATTACGATAACGAATC+TGG | 0.373750 | 5.1:+25140299 | None:intergenic |
| TCACTATTACTTCTCAGCTT+TGG | 0.377256 | 5.1:-25140488 | MS.gene44377:CDS |
| GAAAACTTCCTCCTCATTTG+TGG | 0.403748 | 5.1:+25143911 | None:intergenic |
| CTGCTATAGGAACAGATATC+AGG | 0.407155 | 5.1:-25141478 | MS.gene44377:CDS |
| TCGAGTTCTTCGGCGGTGGA+AGG | 0.416976 | 5.1:+25140386 | None:intergenic |
| AGATTCGTTATCTGAATTTG+TGG | 0.428102 | 5.1:+25145148 | None:intergenic |
| AGAAAATACAGAAAAGGATC+TGG | 0.430299 | 5.1:-25144751 | MS.gene44377:CDS |
| GATCCATCCAACAGGATAAA+GGG | 0.433194 | 5.1:+25143869 | None:intergenic |
| TAGTCGTTGCTGGTTACAAC+TGG | 0.433888 | 5.1:-25145333 | MS.gene44377:CDS |
| TGAGGCATTTGCGATTGTAT+TGG | 0.440709 | 5.1:-25143333 | MS.gene44377:CDS |
| TGCAGGGGAAGGCGAGGACT+TGG | 0.440859 | 5.1:+25145244 | None:intergenic |
| GAGGTTTGAGTAGTCGTTGC+TGG | 0.442818 | 5.1:-25145343 | MS.gene44377:CDS |
| TAAAATGATTCTTACAAGAA+AGG | 0.457601 | 5.1:+25144707 | None:intergenic |
| GGCGACGGCGTCGAGTTCTT+CGG | 0.459089 | 5.1:+25140376 | None:intergenic |
| GAGTGGATCCACCGACGATT+GGG | 0.461602 | 5.1:-25141687 | MS.gene44377:CDS |
| AAGGTAGAGAAAACGAGTTC+CGG | 0.462931 | 5.1:+25140545 | None:intergenic |
| TGATTAGTGTGGTCATATAG+AGG | 0.468432 | 5.1:+25144092 | None:intergenic |
| TCAAAGTTGTTTCATGTCAT+CGG | 0.468592 | 5.1:-25143661 | MS.gene44377:CDS |
| CTGGAAACATGTGGTATACT+TGG | 0.475749 | 5.1:-25144732 | MS.gene44377:CDS |
| GGCGTCGAGTTCTTCGGCGG+TGG | 0.495466 | 5.1:+25140382 | None:intergenic |
| TGCTAAAGAAAATACAGAAA+AGG | 0.496176 | 5.1:-25144757 | MS.gene44377:CDS |
| GAAAGATCCCTTTATCCTGT+TGG | 0.497748 | 5.1:-25143876 | MS.gene44377:CDS |
| AGAGTGGATCCACCGACGAT+TGG | 0.502957 | 5.1:-25141688 | MS.gene44377:CDS |
| GATCCCTTTATCCTGTTGGA+TGG | 0.503825 | 5.1:-25143872 | MS.gene44377:CDS |
| ATTCTTCGTCTCGCCGGCGC+CGG | 0.505076 | 5.1:-25140564 | MS.gene44377:CDS |
| GGCTCCACACAACACAGTGC+AGG | 0.506857 | 5.1:+25145227 | None:intergenic |
| TTGATTGTAGATGCTGCTAT+AGG | 0.509718 | 5.1:-25141491 | MS.gene44377:intron |
| GCGGTGAAGAGTAATTCAAC+AGG | 0.510549 | 5.1:+25140437 | None:intergenic |
| CGAGTTCTTCGGCGGTGGAA+GGG | 0.515865 | 5.1:+25140387 | None:intergenic |
| AATCATACCAAAGCAGGAAT+CGG | 0.516666 | 5.1:-25144074 | MS.gene44377:CDS |
| CAACAGGATCATCAAAGCTA+TGG | 0.521111 | 5.1:+25140453 | None:intergenic |
| CACACTAATCATACCAAAGC+AGG | 0.522849 | 5.1:-25144080 | MS.gene44377:CDS |
| CTTTCAATTATCCAGGAGAA+GGG | 0.528394 | 5.1:-25144118 | MS.gene44377:intron |
| AATACAATCGCAAATGCCTC+AGG | 0.530998 | 5.1:+25143335 | None:intergenic |
| GCTCCACACAACACAGTGCA+GGG | 0.532225 | 5.1:+25145228 | None:intergenic |
| AGCAACATTCTTCGTCTCGC+CGG | 0.532365 | 5.1:-25140570 | MS.gene44377:CDS |
| TTCCCCTGCACTGTGTTGTG+TGG | 0.538955 | 5.1:-25145231 | MS.gene44377:CDS |
| AAAATTTCTTCACCGGTGAA+CGG | 0.545652 | 5.1:-25140325 | MS.gene44377:CDS |
| CATACATGGATCCATCCAAC+AGG | 0.548997 | 5.1:+25143861 | None:intergenic |
| CCAGTCAATGCGGTTAATGG+AGG | 0.564775 | 5.1:-25144793 | MS.gene44377:intron |
| CGAATCTGGAAACCGTTCAC+CGG | 0.566478 | 5.1:+25140313 | None:intergenic |
| GAGAAAACGAGTTCCGGCGC+CGG | 0.566711 | 5.1:+25140551 | None:intergenic |
| TTATACCTTGAGGTATCAGT+TGG | 0.568198 | 5.1:+25143308 | None:intergenic |
| GACATGAAACAACTTTGAGA+AGG | 0.582373 | 5.1:+25143666 | None:intergenic |
| TGGAAGGGACGTACTGCGAG+TGG | 0.584129 | 5.1:+25140402 | None:intergenic |
| AAGCTGAGAAGTAATAGTGA+TGG | 0.584688 | 5.1:+25140491 | None:intergenic |
| TGAACTGTCCCAATCGTCGG+TGG | 0.587513 | 5.1:+25141679 | None:intergenic |
| CTGCTTTGGTATGATTAGTG+TGG | 0.591645 | 5.1:+25144081 | None:intergenic |
| AGTTGGATCAATCACCTGGT+AGG | 0.599897 | 5.1:+25143617 | None:intergenic |
| AAGTTGTTTCATGTCATCGG+TGG | 0.601407 | 5.1:-25143658 | MS.gene44377:CDS |
| GATTAGTGTGGTCATATAGA+GGG | 0.602810 | 5.1:+25144093 | None:intergenic |
| ACAGATATCAGGAAGAAAAG+TGG | 0.604067 | 5.1:-25141467 | MS.gene44377:intron |
| ACAGTGTAATGCCACAAATG+AGG | 0.604494 | 5.1:-25143922 | MS.gene44377:intron |
| ACACAACACAGTGCAGGGGA+AGG | 0.620815 | 5.1:+25145233 | None:intergenic |
| ACATGAAACAACTTTGAGAA+GGG | 0.633287 | 5.1:+25143667 | None:intergenic |
| ACACAGTGCAGGGGAAGGCG+AGG | 0.635341 | 5.1:+25145238 | None:intergenic |
| GTCATCATCGAAGACGGCGA+CGG | 0.636223 | 5.1:+25140361 | None:intergenic |
| ATCACCGTCATCATCGAAGA+CGG | 0.639955 | 5.1:+25140355 | None:intergenic |
| TACGATATGTATATCACGCA+CGG | 0.642307 | 5.1:+25145112 | None:intergenic |
| GTCGCCGTCTTCGATGATGA+CGG | 0.653263 | 5.1:-25140359 | MS.gene44377:CDS |
| TGGCACCAACTGATACCTCA+AGG | 0.653936 | 5.1:-25143313 | MS.gene44377:intron |
| GCACACTCAATATTCCTACC+AGG | 0.654009 | 5.1:-25143631 | MS.gene44377:intron |
| ACTGTGTTGTGTGGAGCCAG+TGG | 0.659270 | 5.1:-25145222 | MS.gene44377:CDS |
| GTGTAATGCCACAAATGAGG+AGG | 0.661724 | 5.1:-25143919 | MS.gene44377:CDS |
| GAAAAGGATCTGGAAACATG+TGG | 0.667652 | 5.1:-25144741 | MS.gene44377:CDS |
| GACGGCGTCGAGTTCTTCGG+CGG | 0.671567 | 5.1:+25140379 | None:intergenic |
| CTCCACACAACACAGTGCAG+GGG | 0.680286 | 5.1:+25145229 | None:intergenic |
| GTATGAACTGTCCCAATCGT+CGG | 0.682108 | 5.1:+25141676 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATCAGTTTATATTA+TGG | - | chr5.1:25140344-25140363 | MS.gene44377:CDS | 10.0% |
| !!! | TTATTCTATTTTTTTACTAA+TGG | - | chr5.1:25143664-25143683 | MS.gene44377:CDS | 10.0% |
| !!! | TTTTGAAATCAAATTATTAT+TGG | - | chr5.1:25144549-25144568 | MS.gene44377:intron | 10.0% |
| !!! | TTTTTATATTTGAATTCTAA+GGG | - | chr5.1:25144310-25144329 | MS.gene44377:intron | 10.0% |
| !!! | TTTTTTATATTTGAATTCTA+AGG | - | chr5.1:25144309-25144328 | MS.gene44377:intron | 10.0% |
| !! | AAAAAATAACATAAAACTGT+TGG | + | chr5.1:25142277-25142296 | None:intergenic | 15.0% |
| !! | AATTTGTATCTTAATATACA+AGG | - | chr5.1:25143724-25143743 | MS.gene44377:intron | 15.0% |
| !! | CAAAATAAATTGAAAGTTTA+AGG | - | chr5.1:25143107-25143126 | MS.gene44377:intron | 15.0% |
| !! | TGGAAAATATAAAATGAAAA+CGG | + | chr5.1:25140834-25140853 | None:intergenic | 15.0% |
| !!! | AACATTTGATTTAATGTAAT+TGG | - | chr5.1:25143072-25143091 | MS.gene44377:intron | 15.0% |
| !!! | ACATTTTCTAAAATTATTAC+TGG | - | chr5.1:25140689-25140708 | MS.gene44377:intron | 15.0% |
| !!! | ACTATATGTTTAATTTTGAA+TGG | - | chr5.1:25144239-25144258 | MS.gene44377:intron | 15.0% |
| !!! | ATTTAGAATACACTATATTT+TGG | - | chr5.1:25143808-25143827 | MS.gene44377:intron | 15.0% |
| !!! | GATAATAGTTTTGAAATATT+TGG | + | chr5.1:25144747-25144766 | None:intergenic | 15.0% |
| !! | AAAGATTTCAAACCTTAAAT+TGG | + | chr5.1:25142797-25142816 | None:intergenic | 20.0% |
| !! | AATCAAATATTTCAAACCAT+AGG | + | chr5.1:25143476-25143495 | None:intergenic | 20.0% |
| !! | AGATAAATGCTTTATAAAGT+TGG | + | chr5.1:25142047-25142066 | None:intergenic | 20.0% |
| !! | ATGGAAAGAAAAAAAAAACT+AGG | + | chr5.1:25141810-25141829 | None:intergenic | 20.0% |
| !! | ATTATAATATAAGATGCTGA+TGG | + | chr5.1:25144086-25144105 | None:intergenic | 20.0% |
| !! | GATAAAGTTAATATCTTTCA+TGG | + | chr5.1:25141007-25141026 | None:intergenic | 20.0% |
| !! | TAAAATGATTCTTACAAGAA+AGG | + | chr5.1:25140940-25140959 | None:intergenic | 20.0% |
| !! | TAAACTTTACGAGTAATATT+TGG | - | chr5.1:25143282-25143301 | MS.gene44377:intron | 20.0% |
| !! | TATATAATTGTATGTGTTAG+TGG | + | chr5.1:25144518-25144537 | None:intergenic | 20.0% |
| !! | TATTTGGATGTATTACTATT+AGG | + | chr5.1:25144731-25144750 | None:intergenic | 20.0% |
| !! | TGGAAGGAAAAAAAAATATA+AGG | - | chr5.1:25143828-25143847 | MS.gene44377:intron | 20.0% |
| !! | TTATAATATAAGATGCTGAT+GGG | + | chr5.1:25144085-25144104 | None:intergenic | 20.0% |
| !! | TTTCATAATTGTGCAAAAAA+TGG | - | chr5.1:25142400-25142419 | MS.gene44377:intron | 20.0% |
| !!! | AGGCTAATTTTAAAATTGTA+TGG | - | chr5.1:25143368-25143387 | MS.gene44377:intron | 20.0% |
| !!! | ATTTTAAAATTGTATGGAGA+AGG | - | chr5.1:25143374-25143393 | MS.gene44377:intron | 20.0% |
| !!! | CAGTTTTATGTTATTTTTTC+AGG | - | chr5.1:25142278-25142297 | MS.gene44377:intron | 20.0% |
| !!! | TTTGATTTAATGTAATTGGA+TGG | - | chr5.1:25143076-25143095 | MS.gene44377:intron | 20.0% |
| !!! | TTTTAAAATTGTATGGAGAA+GGG | - | chr5.1:25143375-25143394 | MS.gene44377:intron | 20.0% |
| !!! | TTTTGCACAATTATGAAAAT+TGG | + | chr5.1:25142398-25142417 | None:intergenic | 20.0% |
| ! | AAAAAAAACTAGGACATACA+TGG | + | chr5.1:25141800-25141819 | None:intergenic | 25.0% |
| ! | AAATATTTCAAACCATAGGT+TGG | + | chr5.1:25143472-25143491 | None:intergenic | 25.0% |
| ! | AACCTTAATATGTTACATTG+TGG | - | chr5.1:25143601-25143620 | MS.gene44377:intron | 25.0% |
| ! | ACCTTAATATGTTACATTGT+GGG | - | chr5.1:25143602-25143621 | MS.gene44377:intron | 25.0% |
| ! | ACTACTAACTAATTTAACCA+TGG | + | chr5.1:25142153-25142172 | None:intergenic | 25.0% |
| ! | ATAGTTAACTTATTAGTGAC+AGG | - | chr5.1:25143549-25143568 | MS.gene44377:intron | 25.0% |
| ! | ATATTAACTTTATCCATCCA+TGG | - | chr5.1:25141013-25141032 | MS.gene44377:intron | 25.0% |
| ! | ATTAATCTATCAAGCTAACT+TGG | + | chr5.1:25144790-25144809 | None:intergenic | 25.0% |
| ! | CATATCGAAAATTCTCAATA+AGG | - | chr5.1:25144865-25144884 | MS.gene44377:intron | 25.0% |
| ! | GAATAATTTATTAGCGAAGT+TGG | + | chr5.1:25143650-25143669 | None:intergenic | 25.0% |
| ! | TATGGTCTAAAAAGGATTTA+TGG | + | chr5.1:25140374-25140393 | None:intergenic | 25.0% |
| ! | TATTATCGAGTGAATTAGAT+CGG | - | chr5.1:25142113-25142132 | MS.gene44377:intron | 25.0% |
| ! | TGCTAAAGAAAATACAGAAA+AGG | - | chr5.1:25140887-25140906 | MS.gene44377:intron | 25.0% |
| ! | TGTACAAAAACTCCAATTTA+AGG | - | chr5.1:25142782-25142801 | MS.gene44377:intron | 25.0% |
| ! | TTAAGAAACCATCCAATATT+GGG | - | chr5.1:25143309-25143328 | MS.gene44377:intron | 25.0% |
| ! | TTCAAAGGGAATTCATAAAT+AGG | - | chr5.1:25142183-25142202 | MS.gene44377:intron | 25.0% |
| ! | TTCTCTACATTAATATATGC+AGG | - | chr5.1:25144415-25144434 | MS.gene44377:intron | 25.0% |
| !! | AACGGCATAAATAATTTTCA+AGG | + | chr5.1:25140816-25140835 | None:intergenic | 25.0% |
| !! | AACTTACATTCTTTTTGGAT+TGG | - | chr5.1:25141622-25141641 | MS.gene44377:intron | 25.0% |
| !! | ACGGCATAAATAATTTTCAA+GGG | + | chr5.1:25140815-25140834 | None:intergenic | 25.0% |
| !! | TAGTAGTTGATATCTTCAAA+GGG | - | chr5.1:25142169-25142188 | MS.gene44377:intron | 25.0% |
| !! | TATTTTCTTTAGCAAGATCA+AGG | + | chr5.1:25140881-25140900 | None:intergenic | 25.0% |
| !! | TGAATAAACAGAATTTGTTC+AGG | - | chr5.1:25143348-25143367 | MS.gene44377:intron | 25.0% |
| !! | TTGCAAACTTACATTCTTTT+TGG | - | chr5.1:25141617-25141636 | MS.gene44377:intron | 25.0% |
| !! | TTTATATTTTCCAGTCAATG+CGG | - | chr5.1:25140841-25140860 | MS.gene44377:intron | 25.0% |
| !! | TTTTTCCAAAAGCTAAACTT+TGG | + | chr5.1:25141361-25141380 | None:intergenic | 25.0% |
| !!! | AGAATACACTATATTTTGGA+AGG | - | chr5.1:25143812-25143831 | MS.gene44377:intron | 25.0% |
| !!! | CATATTACAGCTTTTAATTC+AGG | - | chr5.1:25140465-25140484 | MS.gene44377:CDS | 25.0% |
| !!! | GATTTCTATAATTAGCCTTA+TGG | - | chr5.1:25140780-25140799 | MS.gene44377:intron | 25.0% |
| !!! | TTACCATAGCATTTTGAAAT+AGG | + | chr5.1:25142524-25142543 | None:intergenic | 25.0% |
| !!! | TTTAGCTTTTGGAAAAATCA+TGG | - | chr5.1:25141364-25141383 | MS.gene44377:intron | 25.0% |
| !!! | TTTTTCTTCCTTTAATTTGC+TGG | - | chr5.1:25143900-25143919 | MS.gene44377:CDS | 25.0% |
| AACTATTGAATGTCTTGATG+AGG | + | chr5.1:25144056-25144075 | None:intergenic | 30.0% | |
| AAGAAAGTGAAAATGGTGAA+AGG | + | chr5.1:25145051-25145070 | None:intergenic | 30.0% | |
| AAGACAAGTATTATACCTTG+AGG | + | chr5.1:25142349-25142368 | None:intergenic | 30.0% | |
| AAGCCTATTTCAAAATGCTA+TGG | - | chr5.1:25142518-25142537 | MS.gene44377:intron | 30.0% | |
| AGAAAATACAGAAAAGGATC+TGG | - | chr5.1:25140893-25140912 | MS.gene44377:intron | 30.0% | |
| AGATCTTCTATATCGACAAA+TGG | + | chr5.1:25142907-25142926 | None:intergenic | 30.0% | |
| AGATTCGTTATCTGAATTTG+TGG | + | chr5.1:25140499-25140518 | None:intergenic | 30.0% | |
| ATCAAAACAAGGGATAATGT+GGG | + | chr5.1:25144373-25144392 | None:intergenic | 30.0% | |
| ATCAACCTAACGATTAAAAC+TGG | - | chr5.1:25142239-25142258 | MS.gene44377:intron | 30.0% | |
| ATCTAGAGGAAAATATAAGC+AGG | + | chr5.1:25142454-25142473 | None:intergenic | 30.0% | |
| CAAATGTTTAGAAAAGCGAA+TGG | + | chr5.1:25141949-25141968 | None:intergenic | 30.0% | |
| CATATAGGCAAGAATTGTTT+GGG | + | chr5.1:25144936-25144955 | None:intergenic | 30.0% | |
| GAAAATGGTGAAAGGTAAAA+AGG | + | chr5.1:25145043-25145062 | None:intergenic | 30.0% | |
| GTTAAGAAACCATCCAATAT+TGG | - | chr5.1:25143308-25143327 | MS.gene44377:intron | 30.0% | |
| TAGATATAAGTCAAACCAGT+AGG | + | chr5.1:25141925-25141944 | None:intergenic | 30.0% | |
| TATCAAAACAAGGGATAATG+TGG | + | chr5.1:25144374-25144393 | None:intergenic | 30.0% | |
| TCAACGAAAAATTTCTTCAC+CGG | - | chr5.1:25145312-25145331 | MS.gene44377:CDS | 30.0% | |
| TCATTTGGAAATACTTGCAA+AGG | - | chr5.1:25144636-25144655 | MS.gene44377:intron | 30.0% | |
| TCCCACAATGTAACATATTA+AGG | + | chr5.1:25143606-25143625 | None:intergenic | 30.0% | |
| TGATGAGTTTAACGAAATCA+TGG | - | chr5.1:25141311-25141330 | MS.gene44377:intron | 30.0% | |
| TGCTGTAAAGAAAGTGAAAA+TGG | + | chr5.1:25145058-25145077 | None:intergenic | 30.0% | |
| TGTAGAGAATGTGACAAAAA+AGG | + | chr5.1:25144404-25144423 | None:intergenic | 30.0% | |
| TTGCAATTAGACACTTCATT+TGG | - | chr5.1:25144621-25144640 | MS.gene44377:intron | 30.0% | |
| TTTGTCGATATAGAAGATCT+AGG | - | chr5.1:25142907-25142926 | MS.gene44377:intron | 30.0% | |
| ! | AAGAGTACATACATAAGAGA+GGG | + | chr5.1:25141165-25141184 | None:intergenic | 30.0% |
| ! | ACATGAAACAACTTTGAGAA+GGG | + | chr5.1:25141980-25141999 | None:intergenic | 30.0% |
| ! | ATAGGTTTTACAACACTGTT+GGG | - | chr5.1:25140756-25140775 | MS.gene44377:intron | 30.0% |
| ! | ATCTTTGATTTACGCTAACA+AGG | - | chr5.1:25142811-25142830 | MS.gene44377:intron | 30.0% |
| ! | ATTGGAGTTTTTGTACACAT+TGG | + | chr5.1:25142779-25142798 | None:intergenic | 30.0% |
| ! | GGAAATCTTATTTGCCATAT+AGG | + | chr5.1:25144951-25144970 | None:intergenic | 30.0% |
| ! | GGTTACTTTATGGTCTAAAA+AGG | + | chr5.1:25140382-25140401 | None:intergenic | 30.0% |
| ! | GTAGTAGTTGATATCTTCAA+AGG | - | chr5.1:25142168-25142187 | MS.gene44377:intron | 30.0% |
| ! | TCAAAGTTGTTTCATGTCAT+CGG | - | chr5.1:25141983-25142002 | MS.gene44377:intron | 30.0% |
| ! | TTTGAAATAGGCTTAAACTG+TGG | + | chr5.1:25142512-25142531 | None:intergenic | 30.0% |
| ! | TTTGCTAGTACAAATGGATT+GGG | + | chr5.1:25144910-25144929 | None:intergenic | 30.0% |
| !! | TAAATAATTTTCAAGGGCAG+TGG | + | chr5.1:25140809-25140828 | None:intergenic | 30.0% |
| !! | TTATGCCAGTTTTAATCGTT+AGG | + | chr5.1:25142247-25142266 | None:intergenic | 30.0% |
| !! | TTCTATAATTAGCCTTATGG+AGG | - | chr5.1:25140783-25140802 | MS.gene44377:intron | 30.0% |
| AAAATTTCTTCACCGGTGAA+CGG | - | chr5.1:25145319-25145338 | MS.gene44377:CDS | 35.0% | |
| AACAATGACTACTCGTTGTT+TGG | - | chr5.1:25143782-25143801 | MS.gene44377:intron | 35.0% | |
| AAGCTCACACAGATTAACAT+AGG | + | chr5.1:25141889-25141908 | None:intergenic | 35.0% | |
| AAGCTGAGAAGTAATAGTGA+TGG | + | chr5.1:25145156-25145175 | None:intergenic | 35.0% | |
| AATCATACCAAAGCAGGAAT+CGG | - | chr5.1:25141570-25141589 | MS.gene44377:intron | 35.0% | |
| AATGGTGAAAGGTAAAAAGG+CGG | + | chr5.1:25145040-25145059 | None:intergenic | 35.0% | |
| AATGTGTGCTATATCCATTG+TGG | + | chr5.1:25142859-25142878 | None:intergenic | 35.0% | |
| ACAGATATCAGGAAGAAAAG+TGG | - | chr5.1:25144177-25144196 | MS.gene44377:intron | 35.0% | |
| AGAATGTGACAAAAAAGGAC+TGG | + | chr5.1:25144399-25144418 | None:intergenic | 35.0% | |
| AGCTCACACAGATTAACATA+GGG | + | chr5.1:25141888-25141907 | None:intergenic | 35.0% | |
| ATAAAGTTGGATCAATCACC+TGG | + | chr5.1:25142034-25142053 | None:intergenic | 35.0% | |
| ATAATTCTCGTGTCTCAAGT+GGG | - | chr5.1:25144263-25144282 | MS.gene44377:intron | 35.0% | |
| ATAGAGATTCAGCACATGTT+TGG | - | chr5.1:25141283-25141302 | MS.gene44377:intron | 35.0% | |
| ATAGCACACATTTGTTTCCA+CGG | - | chr5.1:25142867-25142886 | MS.gene44377:intron | 35.0% | |
| ATGTGTGCTATATCCATTGT+GGG | + | chr5.1:25142858-25142877 | None:intergenic | 35.0% | |
| ATTATGTGATGAGTAAAGCG+AGG | + | chr5.1:25144990-25145009 | None:intergenic | 35.0% | |
| ATTTGACCGTGAAAACAAAC+AGG | - | chr5.1:25142971-25142990 | MS.gene44377:intron | 35.0% | |
| CCAAACAATTCTTGCCTATA+TGG | - | chr5.1:25144934-25144953 | MS.gene44377:intron | 35.0% | |
| CCATATAGGCAAGAATTGTT+TGG | + | chr5.1:25144937-25144956 | None:intergenic | 35.0% | |
| CTAGTTGTATGTTCTTTCTC+AGG | - | chr5.1:25142632-25142651 | MS.gene44377:intron | 35.0% | |
| CTTAGAATATCCATACCATC+CGG | + | chr5.1:25142685-25142704 | None:intergenic | 35.0% | |
| CTTTCAATTATCCAGGAGAA+GGG | - | chr5.1:25141526-25141545 | MS.gene44377:intron | 35.0% | |
| CTTTCCATATTGCAAGTCTT+AGG | - | chr5.1:25141822-25141841 | MS.gene44377:intron | 35.0% | |
| CTTTGCTAGTACAAATGGAT+TGG | + | chr5.1:25144911-25144930 | None:intergenic | 35.0% | |
| GACTTGTCTTTCAATTATCC+AGG | - | chr5.1:25141519-25141538 | MS.gene44377:intron | 35.0% | |
| GATGTTCGAAACAAGGAAAT+TGG | - | chr5.1:25143243-25143262 | MS.gene44377:intron | 35.0% | |
| GATTAGTGTGGTCATATAGA+GGG | + | chr5.1:25141554-25141573 | None:intergenic | 35.0% | |
| GTCAAATGGCGAATACATAT+TGG | + | chr5.1:25142958-25142977 | None:intergenic | 35.0% | |
| GTTATCTGATGTTCGAAACA+AGG | - | chr5.1:25143236-25143255 | MS.gene44377:intron | 35.0% | |
| GTTTCAATTCACAGATGCTA+TGG | - | chr5.1:25142561-25142580 | MS.gene44377:intron | 35.0% | |
| TACACATGGTTTCCATTATC+TGG | + | chr5.1:25143420-25143439 | None:intergenic | 35.0% | |
| TACGATATGTATATCACGCA+CGG | + | chr5.1:25140535-25140554 | None:intergenic | 35.0% | |
| TACTTAGCATCTACATCTAG+AGG | + | chr5.1:25142468-25142487 | None:intergenic | 35.0% | |
| TATTGAATGTCTTGATGAGG+CGG | + | chr5.1:25144053-25144072 | None:intergenic | 35.0% | |
| TCACTATTACTTCTCAGCTT+TGG | - | chr5.1:25145156-25145175 | MS.gene44377:CDS | 35.0% | |
| TCTTTCAATTATCCAGGAGA+AGG | - | chr5.1:25141525-25141544 | MS.gene44377:intron | 35.0% | |
| TGAGTTTAACGAAATCATGG+TGG | - | chr5.1:25141314-25141333 | MS.gene44377:intron | 35.0% | |
| TGATTAGTGTGGTCATATAG+AGG | + | chr5.1:25141555-25141574 | None:intergenic | 35.0% | |
| TGTACAAAAACTCCAACCTA+TGG | - | chr5.1:25143457-25143476 | MS.gene44377:intron | 35.0% | |
| TTAGCAATAGTAGTTCCTAC+TGG | - | chr5.1:25141907-25141926 | MS.gene44377:intron | 35.0% | |
| TTGATTGTAGATGCTGCTAT+AGG | - | chr5.1:25144153-25144172 | MS.gene44377:intron | 35.0% | |
| TTTAATGTAATCACACGTGC+CGG | + | chr5.1:25140664-25140683 | None:intergenic | 35.0% | |
| TTTAGCACATGTTGTTAGCA+GGG | - | chr5.1:25141656-25141675 | MS.gene44377:intron | 35.0% | |
| ! | ATTGCAACAAAGATTAGCTG+AGG | + | chr5.1:25141122-25141141 | None:intergenic | 35.0% |
| ! | CAAGAGTACATACATAAGAG+AGG | + | chr5.1:25141166-25141185 | None:intergenic | 35.0% |
| ! | CATAGGTTTTACAACACTGT+TGG | - | chr5.1:25140755-25140774 | MS.gene44377:intron | 35.0% |
| ! | GAAGTGTCTAATTGCAATCA+CGG | + | chr5.1:25144618-25144637 | None:intergenic | 35.0% |
| ! | GACATGAAACAACTTTGAGA+AGG | + | chr5.1:25141981-25142000 | None:intergenic | 35.0% |
| ! | GGATATTCTAAGAAGTTGTC+CGG | - | chr5.1:25142693-25142712 | MS.gene44377:intron | 35.0% |
| ! | GTTGGAGTTTTTGTACACAT+TGG | + | chr5.1:25143454-25143473 | None:intergenic | 35.0% |
| ! | GTTTTGTGATCATAATGCCA+TGG | + | chr5.1:25141033-25141052 | None:intergenic | 35.0% |
| ! | TCTTTCGCTGTCTTCTTTTA+TGG | - | chr5.1:25141438-25141457 | MS.gene44377:intron | 35.0% |
| ! | TTATACCTTGAGGTATCAGT+TGG | + | chr5.1:25142339-25142358 | None:intergenic | 35.0% |
| ! | TTTTAGCACATGTTGTTAGC+AGG | - | chr5.1:25141655-25141674 | MS.gene44377:intron | 35.0% |
| ! | TTTTGTTCATCTTGATCCAC+TGG | + | chr5.1:25140441-25140460 | None:intergenic | 35.0% |
| !! | AACAAGCCTGTTTGTTTTCA+CGG | + | chr5.1:25142980-25142999 | None:intergenic | 35.0% |
| !! | ACAGCTTTTAATTCAGGAGA+TGG | - | chr5.1:25140471-25140490 | MS.gene44377:CDS | 35.0% |
| !! | AGGACTGGTTTATCAAAACA+AGG | + | chr5.1:25144384-25144403 | None:intergenic | 35.0% |
| !! | GGACTGGTTTATCAAAACAA+GGG | + | chr5.1:25144383-25144402 | None:intergenic | 35.0% |
| !! | TAAATTGACTTGTGTGCTGA+AGG | - | chr5.1:25140976-25140995 | MS.gene44377:intron | 35.0% |
| !! | TGCTTTCGTGTTTTTGAATC+CGG | + | chr5.1:25145127-25145146 | None:intergenic | 35.0% |
| !! | TGTTTGTTTTCACGGTCAAA+TGG | + | chr5.1:25142972-25142991 | None:intergenic | 35.0% |
| !!! | AAGCTCCAAAGTTTAGCTTT+TGG | - | chr5.1:25141353-25141372 | MS.gene44377:intron | 35.0% |
| !!! | TTACTCTTCACCGCTTTTTT+TGG | - | chr5.1:25145216-25145235 | MS.gene44377:CDS | 35.0% |
| AAGGTAGAGAAAACGAGTTC+CGG | + | chr5.1:25145102-25145121 | None:intergenic | 40.0% | |
| AATACAATCGCAAATGCCTC+AGG | + | chr5.1:25142312-25142331 | None:intergenic | 40.0% | |
| AATATCCATACCATCCGGTT+CGG | + | chr5.1:25142680-25142699 | None:intergenic | 40.0% | |
| AATGAAAATAGCAGCAGCAG+TGG | + | chr5.1:25143926-25143945 | None:intergenic | 40.0% | |
| ACAGTGTAATGCCACAAATG+AGG | - | chr5.1:25141722-25141741 | MS.gene44377:intron | 40.0% | |
| AGATTCATGCAGCCCAATAT+TGG | + | chr5.1:25143324-25143343 | None:intergenic | 40.0% | |
| ATTAGCGAAGTTGGATCTAG+CGG | + | chr5.1:25143641-25143660 | None:intergenic | 40.0% | |
| CAACAGGATCATCAAAGCTA+TGG | + | chr5.1:25145194-25145213 | None:intergenic | 40.0% | |
| CACACTAATCATACCAAAGC+AGG | - | chr5.1:25141564-25141583 | MS.gene44377:intron | 40.0% | |
| CATAATTCTCGTGTCTCAAG+TGG | - | chr5.1:25144262-25144281 | MS.gene44377:intron | 40.0% | |
| CCACACAAAGAACCAGATAA+TGG | - | chr5.1:25142730-25142749 | MS.gene44377:intron | 40.0% | |
| CGAGGAAGGAAAGTGATAAA+CGG | + | chr5.1:25144972-25144991 | None:intergenic | 40.0% | |
| CGAGTGGAATCCAAAAAAAG+CGG | + | chr5.1:25145229-25145248 | None:intergenic | 40.0% | |
| CGGAATTCTTATTGACACCA+TGG | - | chr5.1:25142133-25142152 | MS.gene44377:intron | 40.0% | |
| CTACTTCATTTGATGCTGCT+AGG | - | chr5.1:25141201-25141220 | MS.gene44377:intron | 40.0% | |
| CTGCTATAGGAACAGATATC+AGG | - | chr5.1:25144166-25144185 | MS.gene44377:intron | 40.0% | |
| CTGCTTTGGTATGATTAGTG+TGG | + | chr5.1:25141566-25141585 | None:intergenic | 40.0% | |
| CTGGAAACATGTGGTATACT+TGG | - | chr5.1:25140912-25140931 | MS.gene44377:intron | 40.0% | |
| GAAAACTTCCTCCTCATTTG+TGG | + | chr5.1:25141736-25141755 | None:intergenic | 40.0% | |
| GAAAAGGATCTGGAAACATG+TGG | - | chr5.1:25140903-25140922 | MS.gene44377:intron | 40.0% | |
| GAAAATTGGCTGCAACTACA+AGG | + | chr5.1:25142384-25142403 | None:intergenic | 40.0% | |
| GAAAGATCCCTTTATCCTGT+TGG | - | chr5.1:25141768-25141787 | MS.gene44377:intron | 40.0% | |
| GATCCATCCAACAGGATAAA+GGG | + | chr5.1:25141778-25141797 | None:intergenic | 40.0% | |
| GCGAATACATATTGGACTCA+TGG | + | chr5.1:25142950-25142969 | None:intergenic | 40.0% | |
| GCTCACACAGATTAACATAG+GGG | + | chr5.1:25141887-25141906 | None:intergenic | 40.0% | |
| GGGATTATGTGTTTCAGACT+TGG | + | chr5.1:25144353-25144372 | None:intergenic | 40.0% | |
| GGGTTCTTTGCTAGTACAAA+TGG | + | chr5.1:25144916-25144935 | None:intergenic | 40.0% | |
| GTTGCCTAAGACTTGCAATA+TGG | + | chr5.1:25141829-25141848 | None:intergenic | 40.0% | |
| TGGATGCGAAACAAAGAACT+TGG | - | chr5.1:25141458-25141477 | MS.gene44377:intron | 40.0% | |
| TGTGATCATAATGCCATGGA+TGG | + | chr5.1:25141029-25141048 | None:intergenic | 40.0% | |
| TGTGTTCAGACATGCAATAG+TGG | + | chr5.1:25140562-25140581 | None:intergenic | 40.0% | |
| TTCATTTATGTCGCAGAGAG+TGG | - | chr5.1:25143940-25143959 | MS.gene44377:intron | 40.0% | |
| TTTCCAGTCAATGCGGTTAA+TGG | - | chr5.1:25140848-25140867 | MS.gene44377:intron | 40.0% | |
| ! | AAGTTGTTTCATGTCATCGG+TGG | - | chr5.1:25141986-25142005 | MS.gene44377:intron | 40.0% |
| ! | GCACTGACAATTCAGATTGA+AGG | - | chr5.1:25140627-25140646 | MS.gene44377:intron | 40.0% |
| ! | TGAGGCATTTGCGATTGTAT+TGG | - | chr5.1:25142311-25142330 | MS.gene44377:intron | 40.0% |
| !! | CAAATGGATTGGGAATGAGT+AGG | + | chr5.1:25144900-25144919 | None:intergenic | 40.0% |
| !! | CCATTATCTGGTTCTTTGTG+TGG | + | chr5.1:25142733-25142752 | None:intergenic | 40.0% |
| !! | GTTTTGATCGATGGCAAGAT+TGG | + | chr5.1:25141407-25141426 | None:intergenic | 40.0% |
| !! | TGCAGTGTGTAGCTCTAATT+GGG | + | chr5.1:25143763-25143782 | None:intergenic | 40.0% |
| !! | TTGCAGTGTGTAGCTCTAAT+TGG | + | chr5.1:25143764-25143783 | None:intergenic | 40.0% |
| !! | TTTTCAGGCAATGATTCCTG+AGG | - | chr5.1:25142293-25142312 | MS.gene44377:intron | 40.0% |
| !!! | TGAGTGCATGTTTTGATCGA+TGG | + | chr5.1:25141416-25141435 | None:intergenic | 40.0% |
| AGCAGTGGCCAGCAAATTAA+AGG | + | chr5.1:25143911-25143930 | None:intergenic | 45.0% | |
| AGTTGGATCAATCACCTGGT+AGG | + | chr5.1:25142030-25142049 | None:intergenic | 45.0% | |
| ATCACCGTCATCATCGAAGA+CGG | + | chr5.1:25145292-25145311 | None:intergenic | 45.0% | |
| ATGTTCTTTCTCAGGAGCTG+TGG | - | chr5.1:25142640-25142659 | MS.gene44377:intron | 45.0% | |
| CAGCACATACTATCTCACGA+CGG | - | chr5.1:25143517-25143536 | MS.gene44377:intron | 45.0% | |
| CATACATGGATCCATCCAAC+AGG | + | chr5.1:25141786-25141805 | None:intergenic | 45.0% | |
| CCACACAGAGAACCAGATAA+TGG | - | chr5.1:25143405-25143424 | MS.gene44377:intron | 45.0% | |
| GATCCCTTTATCCTGTTGGA+TGG | - | chr5.1:25141772-25141791 | MS.gene44377:intron | 45.0% | |
| GCACACTCAATATTCCTACC+AGG | - | chr5.1:25142013-25142032 | MS.gene44377:intron | 45.0% | |
| GCGGTGAAGAGTAATTCAAC+AGG | + | chr5.1:25145210-25145229 | None:intergenic | 45.0% | |
| GGATCCATCCAACAGGATAA+AGG | + | chr5.1:25141779-25141798 | None:intergenic | 45.0% | |
| GGTGTTAACATGTCAGTGTC+AGG | - | chr5.1:25144570-25144589 | MS.gene44377:intron | 45.0% | |
| GTATGAACTGTCCCAATCGT+CGG | + | chr5.1:25143971-25143990 | None:intergenic | 45.0% | |
| GTGTAATGCCACAAATGAGG+AGG | - | chr5.1:25141725-25141744 | MS.gene44377:intron | 45.0% | |
| TAATGTTTCTCATGCGCCGA+CGG | - | chr5.1:25145006-25145025 | MS.gene44377:intron | 45.0% | |
| TACACAGGGTTGCCATTATC+TGG | + | chr5.1:25142745-25142764 | None:intergenic | 45.0% | |
| TCATGCAGCCCAATATTGGA+TGG | + | chr5.1:25143320-25143339 | None:intergenic | 45.0% | |
| TCTAAGAAGTTGTCCGGAGA+GGG | - | chr5.1:25142699-25142718 | MS.gene44377:intron | 45.0% | |
| TGTCTATGACGGTGCTTCAT+AGG | - | chr5.1:25140738-25140757 | MS.gene44377:intron | 45.0% | |
| TGTGATGAGTAAAGCGAGGA+AGG | + | chr5.1:25144986-25145005 | None:intergenic | 45.0% | |
| ! | GCGAGGACTTGGTTACTTTA+TGG | + | chr5.1:25140392-25140411 | None:intergenic | 45.0% |
| ! | TAGTCGTTGCTGGTTACAAC+TGG | - | chr5.1:25140311-25140330 | MS.gene44377:CDS | 45.0% |
| ! | TTCTAAGAAGTTGTCCGGAG+AGG | - | chr5.1:25142698-25142717 | MS.gene44377:intron | 45.0% |
| !! | CCATTATCTGGTTCTCTGTG+TGG | + | chr5.1:25143408-25143427 | None:intergenic | 45.0% |
| !! | TGAAGCACCGTCATAGACAT+CGG | + | chr5.1:25140737-25140756 | None:intergenic | 45.0% |
| !! | TTAGATGCCGATTCCTGCTT+TGG | + | chr5.1:25141580-25141599 | None:intergenic | 45.0% |
| AGCAACATTCTTCGTCTCGC+CGG | - | chr5.1:25145074-25145093 | MS.gene44377:intron | 50.0% | |
| CACATGTTGTTAGCAGGGCT+TGG | - | chr5.1:25141661-25141680 | MS.gene44377:intron | 50.0% | |
| CCAGTCAATGCGGTTAATGG+AGG | - | chr5.1:25140851-25140870 | MS.gene44377:intron | 50.0% | |
| CGAAGTTGGATCTAGCGGAA+GGG | + | chr5.1:25143636-25143655 | None:intergenic | 50.0% | |
| CGAATCTGGAAACCGTTCAC+CGG | + | chr5.1:25145334-25145353 | None:intergenic | 50.0% | |
| CGGACACGACACTGATACAT+TGG | + | chr5.1:25140717-25140736 | None:intergenic | 50.0% | |
| CTAAGAAGTTGTCCGGAGAG+GGG | - | chr5.1:25142700-25142719 | MS.gene44377:intron | 50.0% | |
| GAAAGGTAAAAAGGCGGCTC+CGG | + | chr5.1:25145034-25145053 | None:intergenic | 50.0% | |
| GAAGTTGGATCTAGCGGAAG+GGG | + | chr5.1:25143635-25143654 | None:intergenic | 50.0% | |
| GTCGTGTCCGATGTCTATGA+CGG | - | chr5.1:25140727-25140746 | MS.gene44377:intron | 50.0% | |
| TATAGAGGGTTCCCTTCTCC+TGG | + | chr5.1:25141540-25141559 | None:intergenic | 50.0% | |
| TCTCTTTCGCCTAACCGAAC+CGG | - | chr5.1:25142663-25142682 | MS.gene44377:intron | 50.0% | |
| TGGAGCAGTGCTCATACACA+TGG | + | chr5.1:25143434-25143453 | None:intergenic | 50.0% | |
| TGGCACCAACTGATACCTCA+AGG | - | chr5.1:25142331-25142350 | MS.gene44377:intron | 50.0% | |
| TGGTGAGAGTCATATCACCG+TGG | + | chr5.1:25142887-25142906 | None:intergenic | 50.0% | |
| TGTGGATGAAATCCCCTCTC+CGG | + | chr5.1:25142715-25142734 | None:intergenic | 50.0% | |
| ! | CCTCCATTAACCGCATTGAC+TGG | + | chr5.1:25140854-25140873 | None:intergenic | 50.0% |
| ! | CTCGTTTTCTCTACCTTCGC+CGG | - | chr5.1:25145105-25145124 | MS.gene44377:intron | 50.0% |
| !! | CGTGTTTTTGAATCCGGCGA+AGG | + | chr5.1:25145121-25145140 | None:intergenic | 50.0% |
| ACACAACACAGTGCAGGGGA+AGG | + | chr5.1:25140414-25140433 | None:intergenic | 55.0% | |
| ACTGTGTTGTGTGGAGCCAG+TGG | - | chr5.1:25140422-25140441 | MS.gene44377:CDS | 55.0% | |
| AGAGTGGATCCACCGACGAT+TGG | - | chr5.1:25143956-25143975 | MS.gene44377:intron | 55.0% | |
| CAGCGCATACTGTCCCACAA+TGG | - | chr5.1:25142842-25142861 | MS.gene44377:intron | 55.0% | |
| CCTAACCGAACCGGATGGTA+TGG | - | chr5.1:25142672-25142691 | MS.gene44377:intron | 55.0% | |
| CTCCACACAACACAGTGCAG+GGG | + | chr5.1:25140418-25140437 | None:intergenic | 55.0% | |
| GAGTGGATCCACCGACGATT+GGG | - | chr5.1:25143957-25143976 | MS.gene44377:intron | 55.0% | |
| GCGAAGTTGGATCTAGCGGA+AGG | + | chr5.1:25143637-25143656 | None:intergenic | 55.0% | |
| GCTCCACACAACACAGTGCA+GGG | + | chr5.1:25140419-25140438 | None:intergenic | 55.0% | |
| GTCATCATCGAAGACGGCGA+CGG | + | chr5.1:25145286-25145305 | None:intergenic | 55.0% | |
| GTCGCCGTCTTCGATGATGA+CGG | - | chr5.1:25145285-25145304 | MS.gene44377:CDS | 55.0% | |
| TGAACTGTCCCAATCGTCGG+TGG | + | chr5.1:25143968-25143987 | None:intergenic | 55.0% | |
| TGGAGCAGTGCTCGTACACA+GGG | + | chr5.1:25142759-25142778 | None:intergenic | 55.0% | |
| TTCCCCTGCACTGTGTTGTG+TGG | - | chr5.1:25140413-25140432 | MS.gene44377:CDS | 55.0% | |
| TTGGAGCAGTGCTCGTACAC+AGG | + | chr5.1:25142760-25142779 | None:intergenic | 55.0% | |
| TTTCGCCTAACCGAACCGGA+TGG | - | chr5.1:25142667-25142686 | MS.gene44377:intron | 55.0% | |
| ! | ATTGAAGGTGCGTCCGACAC+CGG | - | chr5.1:25140642-25140661 | MS.gene44377:intron | 55.0% |
| ! | GTAATCACACGTGCCGGTGT+CGG | + | chr5.1:25140658-25140677 | None:intergenic | 55.0% |
| !! | CCATACCATCCGGTTCGGTT+AGG | + | chr5.1:25142675-25142694 | None:intergenic | 55.0% |
| CAAGGGCAGTGGCCTCCATA+AGG | + | chr5.1:25140798-25140817 | None:intergenic | 60.0% | |
| CGAGTTCTTCGGCGGTGGAA+GGG | + | chr5.1:25145260-25145279 | None:intergenic | 60.0% | |
| GAGAAAACGAGTTCCGGCGC+CGG | + | chr5.1:25145096-25145115 | None:intergenic | 60.0% | |
| GGCTCCACACAACACAGTGC+AGG | + | chr5.1:25140420-25140439 | None:intergenic | 60.0% | |
| TCGAGTTCTTCGGCGGTGGA+AGG | + | chr5.1:25145261-25145280 | None:intergenic | 60.0% | |
| TGGAAGGGACGTACTGCGAG+TGG | + | chr5.1:25145245-25145264 | None:intergenic | 60.0% | |
| ACACAGTGCAGGGGAAGGCG+AGG | + | chr5.1:25140409-25140428 | None:intergenic | 65.0% | |
| ATTCTTCGTCTCGCCGGCGC+CGG | - | chr5.1:25145080-25145099 | MS.gene44377:intron | 65.0% | |
| TGCAGGGGAAGGCGAGGACT+TGG | + | chr5.1:25140403-25140422 | None:intergenic | 65.0% | |
| ! | GACGGCGTCGAGTTCTTCGG+CGG | + | chr5.1:25145268-25145287 | None:intergenic | 65.0% |
| ! | GGCGACGGCGTCGAGTTCTT+CGG | + | chr5.1:25145271-25145290 | None:intergenic | 65.0% |
| ! | GGCGTCGAGTTCTTCGGCGG+TGG | + | chr5.1:25145265-25145284 | None:intergenic | 70.0% |
| ! | TTCTCATGCGCCGACGGCGC+CGG | - | chr5.1:25145012-25145031 | MS.gene44377:intron | 70.0% |
| AAAGGCGGCTCCGGCGCCGT+CGG | + | chr5.1:25145025-25145044 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 25140304 | 25145362 | 25140304 | ID=MS.gene44377 |
| chr5.1 | mRNA | 25140304 | 25145362 | 25140304 | ID=MS.gene44377.t1;Parent=MS.gene44377 |
| chr5.1 | exon | 25145115 | 25145362 | 25145115 | ID=MS.gene44377.t1.exon1;Parent=MS.gene44377.t1 |
| chr5.1 | CDS | 25145115 | 25145362 | 25145115 | ID=cds.MS.gene44377.t1;Parent=MS.gene44377.t1 |
| chr5.1 | exon | 25144722 | 25144811 | 25144722 | ID=MS.gene44377.t1.exon2;Parent=MS.gene44377.t1 |
| chr5.1 | CDS | 25144722 | 25144811 | 25144722 | ID=cds.MS.gene44377.t1;Parent=MS.gene44377.t1 |
| chr5.1 | exon | 25144063 | 25144125 | 25144063 | ID=MS.gene44377.t1.exon3;Parent=MS.gene44377.t1 |
| chr5.1 | CDS | 25144063 | 25144125 | 25144063 | ID=cds.MS.gene44377.t1;Parent=MS.gene44377.t1 |
| chr5.1 | exon | 25143866 | 25143940 | 25143866 | ID=MS.gene44377.t1.exon4;Parent=MS.gene44377.t1 |
| chr5.1 | CDS | 25143866 | 25143940 | 25143866 | ID=cds.MS.gene44377.t1;Parent=MS.gene44377.t1 |
| chr5.1 | exon | 25143632 | 25143694 | 25143632 | ID=MS.gene44377.t1.exon5;Parent=MS.gene44377.t1 |
| chr5.1 | CDS | 25143632 | 25143694 | 25143632 | ID=cds.MS.gene44377.t1;Parent=MS.gene44377.t1 |
| chr5.1 | exon | 25143314 | 25143366 | 25143314 | ID=MS.gene44377.t1.exon6;Parent=MS.gene44377.t1 |
| chr5.1 | CDS | 25143314 | 25143366 | 25143314 | ID=cds.MS.gene44377.t1;Parent=MS.gene44377.t1 |
| chr5.1 | exon | 25141676 | 25141710 | 25141676 | ID=MS.gene44377.t1.exon7;Parent=MS.gene44377.t1 |
| chr5.1 | CDS | 25141676 | 25141710 | 25141676 | ID=cds.MS.gene44377.t1;Parent=MS.gene44377.t1 |
| chr5.1 | exon | 25141468 | 25141503 | 25141468 | ID=MS.gene44377.t1.exon8;Parent=MS.gene44377.t1 |
| chr5.1 | CDS | 25141468 | 25141503 | 25141468 | ID=cds.MS.gene44377.t1;Parent=MS.gene44377.t1 |
| chr5.1 | exon | 25140304 | 25140590 | 25140304 | ID=MS.gene44377.t1.exon9;Parent=MS.gene44377.t1 |
| chr5.1 | CDS | 25140304 | 25140590 | 25140304 | ID=cds.MS.gene44377.t1;Parent=MS.gene44377.t1 |
| Gene Sequence |
| Protein sequence |
