AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060850.t1 MTR_1g097850 92.775 346 7 2 1 342 19 350 0.0 664
MS.gene060850.t1 MTR_6g039820 78.086 324 67 1 1 320 19 342 0.0 545
MS.gene060850.t1 MTR_3g013430 66.769 325 103 2 2 322 131 454 6.29e-169 480
MS.gene060850.t1 MTR_1g097850 92.531 241 4 1 1 241 19 245 7.56e-167 465
MS.gene060850.t1 MTR_8g041330 62.848 323 115 2 2 320 40 361 2.19e-155 442
MS.gene060850.t1 MTR_6g040230 75.319 235 52 2 90 320 263 495 3.50e-126 371
MS.gene060850.t1 MTR_2g054370 32.500 320 197 6 9 320 57 365 4.46e-46 161
MS.gene060850.t1 MTR_8g041220 59.140 93 33 2 220 308 40 131 6.10e-34 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060850.t1 AT1G74320 65.031 326 109 2 2 323 23 347 1.69e-163 460
MS.gene060850.t1 AT4G09760 64.815 324 108 3 2 320 19 341 2.47e-162 457
MS.gene060850.t1 AT4G09760 64.815 324 108 3 2 320 19 341 2.47e-162 457
MS.gene060850.t1 AT1G71697 64.000 325 112 2 3 322 22 346 2.44e-160 452
MS.gene060850.t1 AT4G09760 61.650 206 77 2 2 206 19 223 2.07e-92 276
MS.gene060850.t1 AT4G09760 60.733 191 73 2 2 191 19 208 9.66e-84 253
MS.gene060850.t1 AT2G26830 32.588 313 189 7 17 317 58 360 9.73e-49 168

Find 0 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTCAATAGAAAATA+AGG + 10958:26840-26859 MS.gene060850:intron 10.0%
!! TAATAGAACTAAATAATTTA+TGG + 10958:27749-27768 MS.gene060850:intron 10.0%
!!! ATTGGATTTTTTTATTAAAA+TGG - 10958:26265-26284 MS.gene060850:intergenic 10.0%
!!! CATAATTTTTTTAAATCAAA+TGG - 10958:28173-28192 MS.gene060850:intergenic 10.0%
!!! TATTTACATTTTTAAGTTTA+AGG + 10958:27954-27973 MS.gene060850:intron 10.0%
!!! TCTTTAAAAAAGAAATTTAA+TGG + 10958:27478-27497 MS.gene060850:intron 10.0%
!!! TTAAATTTCTTTTTTAAAGA+TGG - 10958:27478-27497 MS.gene060850:intergenic 10.0%
!! AAAAAAGAAATTTAATGGAA+CGG + 10958:27483-27502 MS.gene060850:intron 15.0%
!! ACAAAACAGTAAAATATAAT+TGG - 10958:26668-26687 MS.gene060850:intergenic 15.0%
!! ATATTATCTTGCAAAATAAA+GGG + 10958:27248-27267 MS.gene060850:intron 15.0%
!! CTTCTTAACTTATAAAATTA+AGG - 10958:26404-26423 MS.gene060850:intergenic 15.0%
!!! ATTTTATAAGTTAAGAAGTT+TGG + 10958:26406-26425 MS.gene060850:intron 15.0%
!!! TAAGAAGTATATTTGATATT+CGG - 10958:28859-28878 MS.gene060850:intergenic 15.0%
!!! TTCAATTGATTTTAATTCTT+TGG - 10958:27891-27910 MS.gene060850:intergenic 15.0%
!! AAGATAAAGGGAATAAATTA+AGG - 10958:27388-27407 MS.gene060850:intergenic 20.0%
!! AATTTATGTGTCTGTAAAAA+AGG - 10958:27789-27808 MS.gene060850:intergenic 20.0%
!! ACTAAACTAAACTAACTTAT+AGG - 10958:26873-26892 MS.gene060850:intergenic 20.0%
!! AGAATAAATAACATGAAGAA+AGG - 10958:27576-27595 MS.gene060850:intergenic 20.0%
!! AGATAAAGGGAATAAATTAA+GGG - 10958:27387-27406 MS.gene060850:intergenic 20.0%
!! AGATGATGAAATAAATATTC+TGG + 10958:28299-28318 MS.gene060850:CDS 20.0%
!! ATTTATCTGAAAAACTTCAT+TGG - 10958:25864-25883 MS.gene060850:intergenic 20.0%
!! CATATTATCTTGCAAAATAA+AGG + 10958:27247-27266 MS.gene060850:intron 20.0%
!! CTAAATAATTTATGGAACTA+AGG + 10958:27757-27776 MS.gene060850:intron 20.0%
!! GCATGTTTCTTTATTATTAT+TGG - 10958:27600-27619 MS.gene060850:intergenic 20.0%
!! TAAATGTTCATTAGTAAACT+TGG + 10958:27726-27745 MS.gene060850:intron 20.0%
!! TATATAAAGTAGATCAAGAT+CGG - 10958:27211-27230 MS.gene060850:intergenic 20.0%
!! TATTCAATAGAAAATAAGGT+AGG + 10958:26844-26863 MS.gene060850:intron 20.0%
!!! AAAATCAATTTTGTTGCAAT+TGG + 10958:26589-26608 MS.gene060850:intron 20.0%
!!! AATTTATTCCCTTTATCTTT+TGG + 10958:27389-27408 MS.gene060850:intron 20.0%
!!! ATGAAGTTTTTCAGATAAAT+TGG + 10958:25864-25883 MS.gene060850:CDS 20.0%
!!! CAGAAATATTTCTATCATAT+TGG - 10958:26283-26302 MS.gene060850:intergenic 20.0%
!!! CTATTCTTCAATTTTGAATT+AGG - 10958:26432-26451 MS.gene060850:intergenic 20.0%
!!! TAATTTGTAGAACTAAAAAG+TGG + 10958:26210-26229 MS.gene060850:intron 20.0%
!!! TATAAGTAACTATCATGTTT+TGG - 10958:28462-28481 MS.gene060850:intergenic 20.0%
!!! TATTTTCTAAATTTACTTGC+AGG - 10958:26798-26817 MS.gene060850:intergenic 20.0%
!!! TGTTGAAATTTTCTTCAATA+GGG + 10958:25943-25962 MS.gene060850:CDS 20.0%
! ACAATATGGTAACATTATGA+TGG + 10958:28374-28393 MS.gene060850:CDS 25.0%
! ATAACATGAAGAAAGGAATA+TGG - 10958:27569-27588 MS.gene060850:intergenic 25.0%
! CAAAGGAAACAAAAAAATTC+GGG + 10958:28265-28284 MS.gene060850:CDS 25.0%
! CCAAAGGAAACAAAAAAATT+CGG + 10958:28264-28283 MS.gene060850:CDS 25.0%
! CTAAGAACAAAAAATTTACC+AGG - 10958:28633-28652 MS.gene060850:intergenic 25.0%
! GCAAGATAATATGTTATGAT+GGG - 10958:27240-27259 MS.gene060850:intergenic 25.0%
! TAACATGAAGAAAGGAATAT+GGG - 10958:27568-27587 MS.gene060850:intergenic 25.0%
! TATGTATGCATAGAATGATA+AGG + 10958:27670-27689 MS.gene060850:intron 25.0%
! TCATAATGTTACCATATTGT+AGG - 10958:28374-28393 MS.gene060850:intergenic 25.0%
! TGATCTCAAAAGCTAAAATA+TGG - 10958:27292-27311 MS.gene060850:intergenic 25.0%
! TGCAAGATAATATGTTATGA+TGG - 10958:27241-27260 MS.gene060850:intergenic 25.0%
! TTGAAGTTTATCATGTACTT+TGG + 10958:26143-26162 MS.gene060850:intron 25.0%
! TTGAATAGAACAAACCAAAT+AGG - 10958:26633-26652 MS.gene060850:intergenic 25.0%
! TTGACATATAAGAACCTATT+TGG + 10958:26616-26635 MS.gene060850:intron 25.0%
! TTGATTACAAAGAATATGCA+AGG + 10958:29132-29151 MS.gene060850:CDS 25.0%
!! GTGTTGAAATTTTCTTCAAT+AGG + 10958:25942-25961 MS.gene060850:CDS 25.0%
!! TGAAATAAATATTCTGGAGA+AGG + 10958:28305-28324 MS.gene060850:CDS 25.0%
!!! AAATCACCATCATTTTTTGT+TGG - 10958:25890-25909 MS.gene060850:intergenic 25.0%
!!! CGAATTTTTTTGTTTCCTTT+GGG - 10958:28266-28285 MS.gene060850:intergenic 25.0%
!!! GAATTTTTTTGTTTCCTTTG+GGG - 10958:28265-28284 MS.gene060850:intergenic 25.0%
!!! TTTTTTGCATCATGAAACTA+TGG + 10958:26486-26505 MS.gene060850:intron 25.0%
AAGATGATATTTCAGAGTCA+CGG - 10958:28042-28061 MS.gene060849:intergenic 30.0%
AATTGGCCAACAAAAAATGA+TGG + 10958:25881-25900 MS.gene060850:CDS 30.0%
ACAAAAAGGAACACATTAAC+AGG - 10958:27842-27861 MS.gene060850:intergenic 30.0%
AGGGAATAAATTAAGGGAAA+AGG - 10958:27381-27400 MS.gene060850:intergenic 30.0%
CAAATTCATCATCCTTGTAT+TGG - 10958:27923-27942 MS.gene060850:intergenic 30.0%
CTGGGTAGGTAATATAATTA+GGG + 10958:26319-26338 MS.gene060850:intron 30.0%
GAAAAATTTCTTGCAGTGAA+TGG + 10958:27156-27175 MS.gene060850:intron 30.0%
TAAGGTGAATCAGTTAATGA+CGG + 10958:28935-28954 MS.gene060850:CDS 30.0%
TACAAATTAGTATGTCAGCA+AGG - 10958:28720-28739 MS.gene060850:intergenic 30.0%
TCACACTAATTGTAAGCTAA+TGG + 10958:28415-28434 MS.gene060850:intron 30.0%
TTTGTCTTTCCAATCAGAAT+CGG + 10958:27092-27111 MS.gene060850:intron 30.0%
! AGACAAGTTCTTTTATTGGT+AGG + 10958:26907-26926 MS.gene060850:intron 30.0%
! CAAAAAATGATGGTGATTTG+AGG + 10958:25891-25910 MS.gene060850:CDS 30.0%
! GAAAGAGTTTTACCAATACA+AGG + 10958:27908-27927 MS.gene060850:intron 30.0%
! GTCAAGACAAGTTCTTTTAT+TGG + 10958:26903-26922 MS.gene060850:intron 30.0%
! TGTTTTCCATGTGTTTTACT+AGG + 10958:28208-28227 MS.gene060850:intron 30.0%
!! TGACTCTGAAATATCATCTT+TGG + 10958:28042-28061 MS.gene060850:CDS 30.0%
!! TTTGATTGCTTTGAGAAGAT+AGG + 10958:26523-26542 MS.gene060850:intron 30.0%
!!! CCGAATTTTTTTGTTTCCTT+TGG - 10958:28267-28286 MS.gene060850:intergenic 30.0%
!!! GTAACTATCATGTTTTGGAA+AGG - 10958:28457-28476 MS.gene060850:intergenic 30.0%
!!! TGCAGCAAATTATTTTTGCT+GGG + 10958:26301-26320 MS.gene060850:intron 30.0%
AGAAAGGAATATGGGAAGAA+AGG - 10958:27560-27579 MS.gene060850:intergenic 35.0%
AGAACACACAATACTCATTG+TGG - 10958:28666-28685 MS.gene060850:intergenic 35.0%
CAGTTAACAAACTAGTATGC+TGG - 10958:27812-27831 MS.gene060850:intergenic 35.0%
CCATTGCTCCAAAAGATAAA+GGG - 10958:27400-27419 MS.gene060850:intergenic 35.0%
CGACAGAGTGAAATTCATAA+TGG - 10958:28810-28829 MS.gene060850:intergenic 35.0%
GACATCAACAACAGACAAAA+AGG - 10958:27856-27875 MS.gene060850:intergenic 35.0%
GATAAGAGAATCACATACTC+TGG - 10958:26068-26087 MS.gene060850:intergenic 35.0%
GCTGGGTAGGTAATATAATT+AGG + 10958:26318-26337 MS.gene060850:intron 35.0%
GGCAAATCATTTCTGTGAAA+TGG + 10958:28558-28577 MS.gene060850:CDS 35.0%
GTACAAAGAAGGCTCATATT+TGG + 10958:28107-28126 MS.gene060850:CDS 35.0%
GTTAAGGAAGCCTACTTTAT+TGG + 10958:29175-29194 MS.gene060850:CDS 35.0%
GTTAATGAGAACACCTATTC+AGG - 10958:27132-27151 MS.gene060850:intergenic 35.0%
TAAAGTAGATCAAGATCGGA+CGG - 10958:27207-27226 MS.gene060850:intergenic 35.0%
TACAATCACTCTTTGTACAC+AGG + 10958:28894-28913 MS.gene060850:intron 35.0%
TACCATATTGTAGGTCATTG+TGG - 10958:28365-28384 MS.gene060850:intergenic 35.0%
TACTCCAAAACAACCAAAAG+AGG - 10958:27437-27456 MS.gene060850:intergenic 35.0%
TCCATTGCTCCAAAAGATAA+AGG - 10958:27401-27420 MS.gene060850:intergenic 35.0%
TCTCGCAAACCATATATTCT+GGG + 10958:28974-28993 MS.gene060850:CDS 35.0%
TCTTGACTACAGTAATATCC+TGG + 10958:28612-28631 MS.gene060850:intron 35.0%
TGTGAAGGATATCAAGAGAT+TGG + 10958:28333-28352 MS.gene060850:CDS 35.0%
TTACTGTAGTCAAGAACATG+AGG - 10958:28607-28626 MS.gene060850:intergenic 35.0%
TTGCAAGTGATTCCATTGAA+AGG + 10958:25830-25849 MS.gene060850:CDS 35.0%
TTTGAGTGTATCTCAAAGCA+TGG + 10958:25983-26002 MS.gene060850:CDS 35.0%
! AAATGATGGTGATTTGAGGA+AGG + 10958:25895-25914 MS.gene060850:CDS 35.0%
! CATGTGTTTTACTAGGAACT+GGG + 10958:28215-28234 MS.gene060850:intron 35.0%
! GAATCCAATTTCCTCTAAGA+GGG - 10958:26944-26963 MS.gene060850:intergenic 35.0%
! GTTGATGAGTCCAATAAAGT+AGG - 10958:29188-29207 MS.gene060850:intergenic 35.0%
! TTTCACAGAAATGATTTGCC+AGG - 10958:28558-28577 MS.gene060850:intergenic 35.0%
!! AAGGTTCTGGTTCGTTTATA+TGG + 10958:25914-25933 MS.gene060850:CDS 35.0%
!! CTCTGAAATATCATCTTTGG+TGG + 10958:28045-28064 MS.gene060850:CDS 35.0%
!! TTTGCCTCTTTTGGTTGTTT+TGG + 10958:27430-27449 MS.gene060850:intron 35.0%
!!! CTGCAGCAAATTATTTTTGC+TGG + 10958:26300-26319 MS.gene060850:intron 35.0%
!!! GCAAATTATTTTTGCTGGGT+AGG + 10958:26305-26324 MS.gene060850:intron 35.0%
!!! TTATCTTTTGGAGCAATGGA+GGG + 10958:27401-27420 MS.gene060850:intron 35.0%
!!! TTTATCTTTTGGAGCAATGG+AGG + 10958:27400-27419 MS.gene060850:intron 35.0%
AACTGTTCACAGTTTCGGTT+TGG - 10958:29220-29239 MS.gene060849:intergenic 40.0%
AAGTCATCGATGTCCTGAAT+AGG + 10958:27116-27135 MS.gene060850:intron 40.0%
ACAAAGAATATGCAAGGCAG+AGG + 10958:29138-29157 MS.gene060850:CDS 40.0%
ACTGTTCACAGTTTCGGTTT+GGG - 10958:29219-29238 MS.gene060850:intergenic 40.0%
AGGAATATGGGAAGAAAGGA+TGG - 10958:27556-27575 MS.gene060850:intergenic 40.0%
AGTGAATGGAAACACGCATT+CGG + 10958:27170-27189 MS.gene060850:intron 40.0%
ATATGAGCCTTCTTTGTACC+AGG - 10958:28106-28125 MS.gene060850:intergenic 40.0%
ATATGATGAACCAGAACTCG+AGG + 10958:28739-28758 MS.gene060850:intron 40.0%
CAAGAAACCAAGCAATGCTA+AGG + 10958:28917-28936 MS.gene060850:CDS 40.0%
CCAGTTCCTAGTAAAACACA+TGG - 10958:28217-28236 MS.gene060850:intergenic 40.0%
CTCATATTTGGCAGAGAATG+AGG + 10958:28119-28138 MS.gene060850:CDS 40.0%
CTCGCAAACCATATATTCTG+GGG + 10958:28975-28994 MS.gene060850:CDS 40.0%
CTCTCGCAAACCATATATTC+TGG + 10958:28973-28992 MS.gene060850:CDS 40.0%
GAACATGAGGTGTATCACTA+TGG - 10958:28594-28613 MS.gene060850:intergenic 40.0%
GAATGGAATCATGTGCTCTT+AGG + 10958:27519-27538 MS.gene060850:intron 40.0%
GATGACTTTCCGATTCTGAT+TGG - 10958:27104-27123 MS.gene060850:intergenic 40.0%
GGAAACAAAAAAATTCGGGC+TGG + 10958:28269-28288 MS.gene060850:CDS 40.0%
GGAATCCAATTTCCTCTAAG+AGG - 10958:26945-26964 MS.gene060850:intergenic 40.0%
TAAGCCCTCTTAGAGGAAAT+TGG + 10958:26937-26956 MS.gene060850:intron 40.0%
TACCAGGCATATGAAGCTTA+TGG - 10958:28090-28109 MS.gene060850:intergenic 40.0%
TCATATGCCTGGTACAAAGA+AGG + 10958:28096-28115 MS.gene060850:CDS 40.0%
TGAATGTGTGTATCTCTGCA+GGG - 10958:26989-27008 MS.gene060850:intergenic 40.0%
TGATTCACCTTAGCATTGCT+TGG - 10958:28927-28946 MS.gene060850:intergenic 40.0%
TGCCACAATGACCTACAATA+TGG + 10958:28360-28379 MS.gene060850:CDS 40.0%
TGTATCTCAAAGCATGGACA+AGG + 10958:25989-26008 MS.gene060850:CDS 40.0%
TTACCTATAAGCCCTCTTAG+AGG + 10958:26930-26949 MS.gene060850:intron 40.0%
TTCCATAAGCTTCATATGCC+TGG + 10958:28085-28104 MS.gene060850:CDS 40.0%
TTGAATGTGTGTATCTCTGC+AGG - 10958:26990-27009 MS.gene060850:intergenic 40.0%
TTGGTCATTGCACCTTTCAA+TGG - 10958:25845-25864 MS.gene060850:intergenic 40.0%
TTTCACTACTGGTAGAGTTG+AGG + 10958:26030-26049 MS.gene060850:CDS 40.0%
! ACGGTATTGAGTCAATGGAA+TGG + 10958:27502-27521 MS.gene060850:intron 40.0%
! ATGGAACGGTATTGAGTCAA+TGG + 10958:27497-27516 MS.gene060850:intron 40.0%
! CAAAGTGTTCACATCATCGA+TGG - 10958:25813-25832 MS.gene060850:intergenic 40.0%
! CCATGTGTTTTACTAGGAAC+TGG + 10958:28214-28233 MS.gene060850:intron 40.0%
! TGTTTTACTAGGAACTGGGT+TGG + 10958:28219-28238 MS.gene060850:intron 40.0%
! TTTCCTCTAAGAGGGCTTAT+AGG - 10958:26936-26955 MS.gene060850:intergenic 40.0%
!! ACCATATATTCTGGGGCTTA+TGG + 10958:28982-29001 MS.gene060850:CDS 40.0%
!! CATATATTCTGGGGCTTATG+GGG + 10958:28984-29003 MS.gene060850:CDS 40.0%
!! CCATATATTCTGGGGCTTAT+GGG + 10958:28983-29002 MS.gene060850:CDS 40.0%
!! GGTTTCAGCAGTATTGGTTA+AGG + 10958:29159-29178 MS.gene060850:CDS 40.0%
!!! CCCTTTATCTTTTGGAGCAA+TGG + 10958:27397-27416 MS.gene060850:intron 40.0%
!!! CTCGCTTCTTCTCTTGTTTT+TGG + 10958:27988-28007 MS.gene060850:intron 40.0%
AATTGGATTCCCGCAAGTCA+AGG + 10958:26954-26973 MS.gene060850:intron 45.0%
ACACACATTCAAGACATCCG+TGG + 10958:26998-27017 MS.gene060850:intron 45.0%
CAAAAGTTTGTGCTCCCCAA+AGG + 10958:28248-28267 MS.gene060850:CDS 45.0%
CAATCCTATTGCGTATGACC+TGG + 10958:28537-28556 MS.gene060850:CDS 45.0%
CAGCGAACTGTTCACAGTTT+CGG - 10958:29225-29244 MS.gene060850:intergenic 45.0%
CAGTAGTGAAACGAGCAAGA+AGG - 10958:26021-26040 MS.gene060850:intergenic 45.0%
CCCATAAGCCCCAGAATATA+TGG - 10958:28986-29005 MS.gene060850:intergenic 45.0%
CTTCTTGCTCGTTTCACTAC+TGG + 10958:26019-26038 MS.gene060850:CDS 45.0%
GAATGTGTGTATCTCTGCAG+GGG - 10958:26988-27007 MS.gene060850:intergenic 45.0%
GGGCTTATGGGGACTTATTT+CGG + 10958:28995-29014 MS.gene060850:CDS 45.0%
GTGAATGGAAACACGCATTC+GGG + 10958:27171-27190 MS.gene060850:intron 45.0%
TGGTGATTTGAGGAAGGTTC+TGG + 10958:25901-25920 MS.gene060850:CDS 45.0%
TTTGCCAGGTCATACGCAAT+AGG - 10958:28544-28563 MS.gene060850:intergenic 45.0%
! CGTGTCTATCTCAGTTCTGA+AGG + 10958:28779-28798 MS.gene060850:CDS 45.0%
! CTGGTTCGTTTATATGGCGA+AGG + 10958:25920-25939 MS.gene060850:CDS 45.0%
! GGGCTATCATTTGCCTCTTT+TGG + 10958:27421-27440 MS.gene060850:intron 45.0%
!! AGTTTCGGTTTGGGCAACAA+TGG - 10958:29210-29229 MS.gene060850:intergenic 45.0%
!! CTTTGGGGAGCACAAACTTT+TGG - 10958:28250-28269 MS.gene060850:intergenic 45.0%
!! TATAATATAGATATAAAAAA+AGG - 10958:26090-26109 MS.gene060850:intergenic 5.0%
!!! ATTTTATTTTATTTTGATAT+AGG + 10958:28495-28514 MS.gene060850:intron 5.0%
!!! TTTATATCTATATTATATTT+TGG + 10958:26093-26112 MS.gene060850:intron 5.0%
AGTGATTACTGCGGTGGCTT+CGG + 10958:25775-25794 MS.gene060850:CDS 50.0%
ATTCCCGCAAGTCAAGGATC+CGG + 10958:26960-26979 MS.gene060850:intron 50.0%
CGATCTTGATCGAACGACCA+CGG - 10958:27018-27037 MS.gene060850:intergenic 50.0%
CGTGGTCGTTCGATCAAGAT+CGG + 10958:27016-27035 MS.gene060850:intron 50.0%
CTGGAGAAGGAGTTGTGTGA+AGG + 10958:28318-28337 MS.gene060850:CDS 50.0%
GGACGGTCAAGATTCAAGCT+TGG + 10958:27037-27056 MS.gene060850:intron 50.0%
GGCAGAGGTTTCAGCAGTAT+TGG + 10958:29153-29172 MS.gene060850:CDS 50.0%
GTCGTTCGATCAAGATCGGA+CGG + 10958:27020-27039 MS.gene060850:intron 50.0%
ACTGCGGTGGCTTCGGATTT+AGG + 10958:25782-25801 MS.gene060850:CDS 55.0%
CTTTGACGCTCCTCGAGTTC+TGG - 10958:28752-28771 MS.gene060850:intergenic 55.0%
GTGAAACGAGCAAGAAGGCG+TGG - 10958:26016-26035 MS.gene060850:intergenic 55.0%
!! CAGAACTCGAGGAGCGTCAA+AGG + 10958:28750-28769 MS.gene060850:intron 55.0%
GTGTATCTCTGCAGGGGAGC+CGG - 10958:26982-27001 MS.gene060850:intergenic 60.0%
! GGAGCCGGATCCTTGACTTG+CGG - 10958:26967-26986 MS.gene060850:intergenic 60.0%
!! GAGCCGGATCCTTGACTTGC+GGG - 10958:26966-26985 MS.gene060850:intergenic 60.0%


Chromosome Type Strat End Strand Name
10958 gene 25770 29265 25770 ID=MS.gene060850
10958 mRNA 25770 29265 25770 ID=MS.gene060850.t1;Parent=MS.gene060850
10958 exon 25770 26069 25770 ID=MS.gene060850.t1.exon1;Parent=MS.gene060850.t1
10958 CDS 25770 26069 25770 ID=cds.MS.gene060850.t1;Parent=MS.gene060850.t1
10958 exon 28019 28140 28019 ID=MS.gene060850.t1.exon2;Parent=MS.gene060850.t1
10958 CDS 28019 28140 28019 ID=cds.MS.gene060850.t1;Parent=MS.gene060850.t1
10958 exon 28230 28425 28230 ID=MS.gene060850.t1.exon3;Parent=MS.gene060850.t1
10958 CDS 28230 28425 28230 ID=cds.MS.gene060850.t1;Parent=MS.gene060850.t1
10958 exon 28517 28622 28517 ID=MS.gene060850.t1.exon4;Parent=MS.gene060850.t1
10958 CDS 28517 28622 28517 ID=cds.MS.gene060850.t1;Parent=MS.gene060850.t1
10958 exon 28753 28800 28753 ID=MS.gene060850.t1.exon5;Parent=MS.gene060850.t1
10958 CDS 28753 28800 28753 ID=cds.MS.gene060850.t1;Parent=MS.gene060850.t1
10958 exon 28916 29016 28916 ID=MS.gene060850.t1.exon6;Parent=MS.gene060850.t1
10958 CDS 28916 29016 28916 ID=cds.MS.gene060850.t1;Parent=MS.gene060850.t1
10958 exon 29110 29265 29110 ID=MS.gene060850.t1.exon7;Parent=MS.gene060850.t1
10958 CDS 29110 29265 29110 ID=cds.MS.gene060850.t1;Parent=MS.gene060850.t1
Gene Sequence

>MS.gene060850

ATGGAAGTGATTACTGCGGTGGCTTCGGATTTAGGAGATGCCATCGATGATGTGAACACTTTGCAAGTGATTCCATTGAAAGGTGCAATGACCAATGAAGTTTTTCAGATAAATTGGCCAACAAAAAATGATGGTGATTTGAGGAAGGTTCTGGTTCGTTTATATGGCGAAGGTGTTGAAATTTTCTTCAATAGGGATGAAGAAATTCGAACTTTTGAGTGTATCTCAAAGCATGGACAAGGTCCACGCCTTCTTGCTCGTTTCACTACTGGTAGAGTTGAGGAGTTTATTCATGCCAGAGTATGTGATTCTCTTATCCTTTTTTTATATCTATATTATATTTTGGTACTTTGATACTTTTTTATTTATATTTTTGAAGTTTATCATGTACTTTGGAGTCTATATAAATTACAAAAGTACATATTTAACATATCATTTTGTAATTTGTAGAACTAAAAAGTGGATAAGACTAAAAACTAAACATATACTTGACCATTTTAATAAAAAAATCCAATATGATAGAAATATTTCTGCAGCAAATTATTTTTGCTGGGTAGGTAATATAATTAGGGAAAAATTCTAAGTTACACACACTTTTATGAAGTGAAGAGTTTAAGAGATTATGCAGAAACCTTAATTTTATAAGTTAAGAAGTTTGGCCTAATTCAAAATTGAAGAATAGTCAAAGTTAAATTTGATCTAGTTATTGTGATAGTTTTTTTGCATCATGAAACTATGGTATTTAGTTATTTGTTTGATTGCTTTGAGAAGATAGGATCATAAAATTTAAACACTGAAAGAAATGAAATTGTTAAAAGAAAAATCAATTTTGTTGCAATTGGAGCATTGACATATAAGAACCTATTTGGTTTGTTCTATTCAATTAGAGACATATCCAATTATATTTTACTGTTTTGTCATGAAGATTTTGAGAAGTGATGTTATATGTTCAAATAGTGAAATATATAAAATTTCATTATATATGTTAAGTTCTTTCAAATATACACTAAGCTGTTTTCAATTTTCCTGCAAGTAAATTTAGAAAATATTGAAAATAAAAAATAAACAAAAAAATATTCAATAGAAAATAAGGTAGGTTACCTATAAGTTAGTTTAGTTTAGTGTCAAATCATGTCAAGACAAGTTCTTTTATTGGTAGGTTACCTATAAGCCCTCTTAGAGGAAATTGGATTCCCGCAAGTCAAGGATCCGGCTCCCCTGCAGAGATACACACATTCAAGACATCCGTGGTCGTTCGATCAAGATCGGACGGTCAAGATTCAAGCTTGGTATTTTGAATTAAAATCAAAATCTGTATTTTTTTTGTCTTTCCAATCAGAATCGGAAAGTCATCGATGTCCTGAATAGGTGTTCTCATTAACTGTAGAAAAATTTCTTGCAGTGAATGGAAACACGCATTCGGGACATCTATGACCGTCCGATCTTGATCTACTTTATATATGTGAGCCCATCATAACATATTATCTTGCAAAATAAAGGGTGCAGTGAATATTTCATTCCATATTTTAGCTTTTGAGATCATAGTCACTTTACAAGTAGATTCACTTTATTGTTTAGTCAAAAGAGCTTTTCTTTGAACTTGTACTTCCTTTTCCCTTAATTTATTCCCTTTATCTTTTGGAGCAATGGAGGGCTATCATTTGCCTCTTTTGGTTGTTTTGGAGTAAATTATTTTTTTGAAGAACCATCTTTAAAAAAGAAATTTAATGGAACGGTATTGAGTCAATGGAATGGAATCATGTGCTCTTAGGTGCTTCTATTACCATCCTTTCTTCCCATATTCCTTTCTTCATGTTATTTATTCTTCCAATAATAATAAAGAAACATGCATTATGTACTTAAACAGTATGTTTTTTGAAAGATATCTGCGATTTCTTTTTATGTATGCATAGAATGATAAGGACTCATGAGTTCATATTCTATTTTACTAATTATTAAATGTTCATTAGTAAACTTGGTAATAGAACTAAATAATTTATGGAACTAAGGTAGTGTCCTTTTTTACAGACACATAAATTCCAGCATACTAGTTTGTTAACTGATTACATCCTGTTAATGTGTTCCTTTTTGTCTGTTGTTGATGTCGCTTTCTATTTTCCAAAGAATTAAAATCAATTGAAAGAGTTTTACCAATACAAGGATGATGAATTTGACAAGCAGTGTTATTTACATTTTTAAGTTTAAGGATTGTGCATAACTCGCTTCTTCTCTTGTTTTTGGCTTTCTAGACTCTCTCAGCTGTTGATCTCCGTGACTCTGAAATATCATCTTTGGTGGCATCTAAGATGAGAGAATTCCATAAGCTTCATATGCCTGGTACAAAGAAGGCTCATATTTGGCAGAGAATGAGGTAGTTATAGATCATGTCATTCTTAAAATCCATTTGATTTAAAAAAATTATGCAGAATATCAAGTGTTGTTTTCCATGTGTTTTACTAGGAACTGGGTTGGTGAAGCCAAAAGTTTGTGCTCCCCAAAGGAAACAAAAAAATTCGGGCTGGACAATCTAGATGATGAAATAAATATTCTGGAGAAGGAGTTGTGTGAAGGATATCAAGAGATTGGTTTTTGCCACAATGACCTACAATATGGTAACATTATGATGGATGAAGAGACTAGATCAATCACACTAATTGTAAGCTAATGGTTATGTATTTTCTTTTCCTTTCCAAAACATGATAGTTACTTATATTGCAGTACTCTAATTTTATTTTATTTTGATATAGGACTACGAATACGCGAGTTACAATCCTATTGCGTATGACCTGGCAAATCATTTCTGTGAAATGGCAGCAGATTACCATAGTGATACACCTCATGTTCTTGACTACAGTAATATCCTGGTAAATTTTTTGTTCTTAGTCTTACATTTCCACAATGAGTATTGTGTGTTCTTGTTTTTGTTTTTATTGATATCATCACTCTACCTTGCTGACATACTAATTTGTATATGATGAACCAGAACTCGAGGAGCGTCAAAGGTTCATTCGTGTCTATCTCAGTTCTGAAGGTTAGTCCATTATGAATTTCACTCTGTCGAAATCATAGATTGAAATGCAACACTTCCGAATATCAAATATACTTCTTAAATTTAAGTTTTTCTTACAATCACTCTTTGTACACAGGCAAGAAACCAAGCAATGCTAAGGTGAATCAGTTAATGACGGCTGTAGAAAAATATACTCTCGCAAACCATATATTCTGGGGCTTATGGGGACTTATTTCGGTAAAGCTCTTTTTAATGTAAATAGTACTTGTTAGTTAAGTATATAACTATATATTATATGCTGATACTATACACATGTTTTATTAATTGCAGAGTTATGTGAATAAAATTGACTTTGATTACAAAGAATATGCAAGGCAGAGGTTTCAGCAGTATTGGTTAAGGAAGCCTACTTTATTGGACTCATCAACCATTGTTGCCCAAACCGAAACTGTGAACAGTTCGCTGCCACTAGCATCATGTGTGTGA

Protein sequence

>MS.gene060850.t1

MEVITAVASDLGDAIDDVNTLQVIPLKGAMTNEVFQINWPTKNDGDLRKVLVRLYGEGVEIFFNRDEEIRTFECISKHGQGPRLLARFTTGRVEEFIHARTLSAVDLRDSEISSLVASKMREFHKLHMPGTKKAHIWQRMRNWVGEAKSLCSPKETKKFGLDNLDDEINILEKELCEGYQEIGFCHNDLQYGNIMMDEETRSITLIDYEYASYNPIAYDLANHFCEMAADYHSDTPHVLDYKLEERQRFIRVYLSSEGKKPSNAKVNQLMTAVEKYTLANHIFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLLDSSTIVAQTETVNSSLPLASCV