Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45048.t1 | AEX20346.1 | 99.4 | 344 | 2 | 0 | 1 | 344 | 1 | 344 | 5.90E-198 | 699.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45048.t1 | Q9ZTR1 | 92.1 | 342 | 18 | 2 | 3 | 344 | 2 | 334 | 5.6e-181 | 634.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45048.t1 | H2EIY6 | 99.4 | 344 | 2 | 0 | 1 | 344 | 1 | 344 | 4.2e-198 | 699.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45048 | MS.gene42684 | PPI |
| MS.gene45048 | MS.gene42624 | PPI |
| MS.gene45048 | MS.gene014976 | PPI |
| MS.gene45048 | MS.gene051552 | PPI |
| MS.gene45048 | MS.gene32768 | PPI |
| MS.gene45048 | MS.gene058418 | PPI |
| MS.gene45048 | MS.gene016160 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45048.t1 | MTR_5g034470 | 97.384 | 344 | 8 | 1 | 1 | 344 | 1 | 343 | 0.0 | 689 |
| MS.gene45048.t1 | MTR_5g034470 | 94.065 | 337 | 19 | 1 | 1 | 337 | 1 | 336 | 0.0 | 650 |
| MS.gene45048.t1 | MTR_8g063940 | 80.802 | 349 | 52 | 3 | 3 | 344 | 2 | 342 | 0.0 | 579 |
| MS.gene45048.t1 | MTR_3g091090 | 64.759 | 332 | 90 | 5 | 34 | 339 | 23 | 353 | 1.97e-148 | 422 |
| MS.gene45048.t1 | MTR_1g028360 | 66.337 | 303 | 87 | 4 | 50 | 339 | 57 | 357 | 2.46e-140 | 402 |
| MS.gene45048.t1 | MTR_3g078190 | 60.473 | 296 | 96 | 2 | 53 | 344 | 41 | 319 | 4.85e-135 | 387 |
| MS.gene45048.t1 | MTR_1g015300 | 33.942 | 274 | 162 | 10 | 34 | 297 | 11 | 275 | 5.65e-39 | 141 |
| MS.gene45048.t1 | MTR_5g006140 | 36.771 | 223 | 133 | 6 | 73 | 290 | 42 | 261 | 1.05e-37 | 137 |
| MS.gene45048.t1 | MTR_5g006140 | 37.264 | 212 | 126 | 5 | 73 | 279 | 42 | 251 | 1.61e-37 | 135 |
| MS.gene45048.t1 | MTR_3g104960 | 30.709 | 254 | 150 | 10 | 47 | 292 | 28 | 263 | 6.56e-28 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45048.t1 | AT1G23820 | 79.580 | 333 | 65 | 2 | 12 | 344 | 5 | 334 | 0.0 | 554 |
| MS.gene45048.t1 | AT1G70310 | 79.403 | 335 | 61 | 3 | 14 | 344 | 10 | 340 | 0.0 | 544 |
| MS.gene45048.t1 | AT1G23820 | 79.926 | 269 | 52 | 1 | 12 | 280 | 49 | 315 | 1.61e-159 | 449 |
| MS.gene45048.t1 | AT5G53120 | 64.371 | 334 | 92 | 4 | 34 | 341 | 23 | 355 | 8.11e-148 | 421 |
| MS.gene45048.t1 | AT5G53120 | 64.371 | 334 | 92 | 4 | 34 | 341 | 23 | 355 | 8.11e-148 | 421 |
| MS.gene45048.t1 | AT5G53120 | 64.371 | 334 | 92 | 4 | 34 | 341 | 23 | 355 | 8.11e-148 | 421 |
| MS.gene45048.t1 | AT5G53120 | 64.371 | 334 | 92 | 4 | 34 | 341 | 23 | 355 | 8.11e-148 | 421 |
| MS.gene45048.t1 | AT5G53120 | 64.371 | 334 | 92 | 4 | 34 | 341 | 23 | 355 | 8.11e-148 | 421 |
| MS.gene45048.t1 | AT5G53120 | 64.371 | 334 | 92 | 4 | 34 | 341 | 40 | 372 | 2.39e-147 | 421 |
| MS.gene45048.t1 | AT5G53120 | 59.280 | 361 | 93 | 5 | 34 | 341 | 23 | 382 | 1.99e-143 | 411 |
| MS.gene45048.t1 | AT5G19530 | 31.541 | 279 | 170 | 8 | 70 | 343 | 40 | 302 | 4.43e-40 | 144 |
| MS.gene45048.t1 | AT5G19530 | 31.541 | 279 | 170 | 8 | 70 | 343 | 47 | 309 | 5.87e-40 | 144 |
Find 74 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTGGTTGAGGTTCTTT+TGG | 0.239220 | 5.3:-23326974 | None:intergenic |
| TCAAGGAAAATCTGATTATC+AGG | 0.273203 | 5.3:+23328535 | MS.gene45048:CDS |
| ATATGGCAAGGTTCTTGTTT+TGG | 0.280455 | 5.3:+23328667 | MS.gene45048:CDS |
| CTCAATTCCAAACCCCAAAA+AGG | 0.285078 | 5.3:+23328760 | MS.gene45048:CDS |
| TCAAAACCTACTGCTATATC+AGG | 0.285866 | 5.3:-23330181 | None:intergenic |
| GGTTTATCTTCTGTTATTCC+TGG | 0.301003 | 5.3:+23326995 | MS.gene45048:CDS |
| TTCTTCTCTTTGCCTCTTCA+AGG | 0.305491 | 5.3:-23326903 | None:intergenic |
| TCAGGATGTTATGGTCTTCC+AGG | 0.350984 | 5.3:+23328553 | MS.gene45048:CDS |
| TTGGTCATTGGTGGAGGAGA+TGG | 0.355582 | 5.3:+23329481 | MS.gene45048:CDS |
| TTTAGAAGCAATTGCTCTCT+TGG | 0.357834 | 5.3:-23331667 | None:intergenic |
| ACTGCATCATAAGTTCCTTC+TGG | 0.359338 | 5.3:-23330349 | None:intergenic |
| ATCTGATTATCAGGATGTTA+TGG | 0.375563 | 5.3:+23328544 | MS.gene45048:CDS |
| TATCTTCTGTTATTCCTGGC+TGG | 0.386803 | 5.3:+23326999 | MS.gene45048:CDS |
| TGACAGAGCCTTTGAATACT+TGG | 0.386990 | 5.3:-23330633 | None:intergenic |
| TTGCTCAACTGAGGGGCCTT+CGG | 0.394265 | 5.3:+23331243 | MS.gene45048:CDS |
| GTGGATTCATCTGATCCTAT+TGG | 0.395416 | 5.3:+23330376 | MS.gene45048:CDS |
| TATATCAGGGAAAAGTTGTT+TGG | 0.400287 | 5.3:-23330167 | None:intergenic |
| ATAACAGAAGATAAACCATT+TGG | 0.430526 | 5.3:-23326989 | None:intergenic |
| GTACTCAGGCGGAAAGTATA+TGG | 0.432205 | 5.3:+23330569 | MS.gene45048:CDS |
| GTGGAAAAGATTCTGTTTCA+AGG | 0.447500 | 5.3:+23328518 | MS.gene45048:CDS |
| TTCGGTCGATTTCAAGCATC+CGG | 0.461644 | 5.3:+23331261 | MS.gene45048:CDS |
| TGGCTATCATTCTCATCAAT+AGG | 0.466884 | 5.3:-23331289 | None:intergenic |
| TCAGAGTTGTAAAATTTCAA+TGG | 0.468115 | 5.3:-23331325 | None:intergenic |
| TGAGTACACACAACACCTCC+TGG | 0.469052 | 5.3:-23330553 | None:intergenic |
| AAAACGAACCAGGCCACATT+GGG | 0.470461 | 5.3:-23327036 | None:intergenic |
| GTTGCAAGGGCTCTTCGTCC+AGG | 0.475620 | 5.3:+23330535 | MS.gene45048:CDS |
| TTTATGCTTTGCTCAACTGA+GGG | 0.479096 | 5.3:+23331235 | MS.gene45048:CDS |
| TCTTCTCTTTGCCTCTTCAA+GGG | 0.480585 | 5.3:-23326902 | None:intergenic |
| GAAGATAAACCATTTGGTTG+AGG | 0.481438 | 5.3:-23326983 | None:intergenic |
| CCAAAAGAACCTCAACCAAA+TGG | 0.482653 | 5.3:+23326974 | MS.gene45048:CDS |
| AACTTATGATGCAGTTATTG+TGG | 0.485527 | 5.3:+23330357 | MS.gene45048:CDS |
| GTCATTGGTGGAGGAGATGG+AGG | 0.490380 | 5.3:+23329484 | MS.gene45048:CDS |
| ATTGCTCTCTTGGCAAAAGA+TGG | 0.491734 | 5.3:-23331657 | None:intergenic |
| CCACGTGTGACACTTAATAT+CGG | 0.495007 | 5.3:+23330208 | MS.gene45048:CDS |
| TCAATGGTCTTCCTGCATGC+TGG | 0.497270 | 5.3:-23331309 | None:intergenic |
| AAGGCTCTGTCAACTATGCT+TGG | 0.497721 | 5.3:+23330644 | MS.gene45048:CDS |
| GAAATTAGCCCAATGTGGCC+TGG | 0.504538 | 5.3:+23327028 | MS.gene45048:CDS |
| TTCTCATCAATAGGATTCAC+CGG | 0.513261 | 5.3:-23331280 | None:intergenic |
| AGGGGAGGCTCACTCATTGA+AGG | 0.518756 | 5.3:+23328496 | MS.gene45048:intron |
| GCAAACAGAAAGCTGCTGAA+TGG | 0.526418 | 5.3:-23331635 | None:intergenic |
| GAAGATGAGTGATCATCTCT+TGG | 0.533026 | 5.3:-23328730 | None:intergenic |
| AGAACACACCTTGGGTATGT+AGG | 0.534999 | 5.3:-23330676 | None:intergenic |
| AGGAGATGGAGGAGTCCTGC+GGG | 0.539206 | 5.3:+23329495 | MS.gene45048:CDS |
| GAAAACGAACCAGGCCACAT+TGG | 0.547905 | 5.3:-23327037 | None:intergenic |
| CTAATTTCAGAGAACCAGCC+AGG | 0.562845 | 5.3:-23327013 | None:intergenic |
| GGTCATTCAGCTCACAGAAA+GGG | 0.566371 | 5.3:+23328694 | MS.gene45048:CDS |
| GGGTCATTCAGCTCACAGAA+AGG | 0.568875 | 5.3:+23328693 | MS.gene45048:CDS |
| GAGAATGATAGCCAGCATGC+AGG | 0.575153 | 5.3:+23331298 | MS.gene45048:CDS |
| GTAGTCAGCAACATATGGCA+AGG | 0.575663 | 5.3:+23328655 | MS.gene45048:intron |
| CCTCTTCAAGGGAAAATCTG+TGG | 0.576006 | 5.3:-23326891 | None:intergenic |
| ATGAGTGATCATCTCTTGGT+AGG | 0.576912 | 5.3:-23328726 | None:intergenic |
| AAGGGAAAATCTGTGGACTC+AGG | 0.578610 | 5.3:-23326884 | None:intergenic |
| GAGGAGATGGAGGAGTCCTG+CGG | 0.584086 | 5.3:+23329494 | MS.gene45048:CDS |
| GCTTCATATGCATATCATTG+AGG | 0.585111 | 5.3:+23330591 | MS.gene45048:CDS |
| AGGAGGTGTTGTGTGTACTC+AGG | 0.589734 | 5.3:+23330555 | MS.gene45048:CDS |
| CATTTGTGAAATAGACAAGA+TGG | 0.590675 | 5.3:+23329552 | MS.gene45048:CDS |
| CAAAACCTACTGCTATATCA+GGG | 0.592364 | 5.3:-23330180 | None:intergenic |
| AATTGTCGCCAAGTATTCAA+AGG | 0.594618 | 5.3:+23330625 | MS.gene45048:CDS |
| TTATGCTTTGCTCAACTGAG+GGG | 0.601606 | 5.3:+23331236 | MS.gene45048:CDS |
| TGTCAACTATGCTTGGACCA+CGG | 0.611981 | 5.3:+23330651 | MS.gene45048:CDS |
| GGAGGCTCACTCATTGAAGG+TGG | 0.624884 | 5.3:+23328499 | MS.gene45048:CDS |
| GTGACACTTAATATCGGCGA+TGG | 0.629074 | 5.3:+23330214 | MS.gene45048:CDS |
| GGGTTTGGAATTGAGCAAAG+AGG | 0.635906 | 5.3:-23328752 | None:intergenic |
| AGGTGTTGTGTGTACTCAGG+CGG | 0.646480 | 5.3:+23330558 | MS.gene45048:CDS |
| ATCTGTGGACTCAGGAAGTG+TGG | 0.650713 | 5.3:-23326876 | None:intergenic |
| CCACGGTTCCTACATACCCA+AGG | 0.659865 | 5.3:+23330668 | MS.gene45048:CDS |
| GCAAGGGCTCTTCGTCCAGG+AGG | 0.667733 | 5.3:+23330538 | MS.gene45048:CDS |
| AATGGCGTGAAACTTCCCGC+AGG | 0.668044 | 5.3:-23329510 | None:intergenic |
| GGATGCTTGAAATCGACCGA+AGG | 0.670797 | 5.3:-23331259 | None:intergenic |
| GTTTCAGAGACACCGTTGTG+AGG | 0.681469 | 5.3:-23326947 | None:intergenic |
| CCGATATTAAGTGTCACACG+TGG | 0.687158 | 5.3:-23330208 | None:intergenic |
| TCTCTGAAATTAGCCCAATG+TGG | 0.705739 | 5.3:+23327023 | MS.gene45048:CDS |
| CCTTGGGTATGTAGGAACCG+TGG | 0.729877 | 5.3:-23330668 | None:intergenic |
| GAAGATCAACTACCTCACAA+CGG | 0.763149 | 5.3:+23326935 | MS.gene45048:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATATATTTTTTTTA+AGG | + | chr5.3:23327337-23327356 | MS.gene45048:intron | 0.0% |
| !!! | ATATATTTTTTTTAAGGTTT+TGG | + | chr5.3:23327343-23327362 | MS.gene45048:intron | 10.0% |
| !!! | GATATGATTATTTTTTATTA+TGG | + | chr5.3:23331171-23331190 | MS.gene45048:intron | 10.0% |
| !!! | TATATTTTTTTTAAGGTTTT+GGG | + | chr5.3:23327344-23327363 | MS.gene45048:intron | 10.0% |
| !!! | TTTTGATTATATGTAATATA+TGG | + | chr5.3:23327508-23327527 | MS.gene45048:intron | 10.0% |
| !! | ACATATACTAAATTATTAGA+GGG | - | chr5.3:23328803-23328822 | None:intergenic | 15.0% |
| !! | ATTATAATAATGACAAATCA+TGG | - | chr5.3:23328274-23328293 | None:intergenic | 15.0% |
| !! | TAAAGACCATAAAAATTATA+AGG | - | chr5.3:23330420-23330439 | None:intergenic | 15.0% |
| !! | TTATAATAATGACAAATCAT+GGG | - | chr5.3:23328273-23328292 | None:intergenic | 15.0% |
| !!! | ACACAAAAATATTGAATTTT+CGG | - | chr5.3:23327088-23327107 | None:intergenic | 15.0% |
| !!! | ACTTTTATTTTTTAAAGTCA+CGG | + | chr5.3:23327974-23327993 | MS.gene45048:intron | 15.0% |
| !!! | ATATTTTTTTTAAGGTTTTG+GGG | + | chr5.3:23327345-23327364 | MS.gene45048:intron | 15.0% |
| !!! | ATTTTTTAGAATCTAAAACA+AGG | + | chr5.3:23331476-23331495 | MS.gene45048:intron | 15.0% |
| !!! | TATAATTTTTATGGTCTTTA+CGG | + | chr5.3:23330420-23330439 | MS.gene45048:intron | 15.0% |
| !!! | TTATTTTTTTGATGAAACTT+AGG | + | chr5.3:23327142-23327161 | MS.gene45048:intron | 15.0% |
| !!! | TTTATTTTTTTTGTTTCAGT+GGG | + | chr5.3:23331203-23331222 | MS.gene45048:intron | 15.0% |
| !!! | TTTTAATCATTATATGTAGA+TGG | + | chr5.3:23328902-23328921 | MS.gene45048:intron | 15.0% |
| !!! | TTTTATTTTTTTTGTTTCAG+TGG | + | chr5.3:23331202-23331221 | MS.gene45048:intron | 15.0% |
| !!! | TTTTTTAGAATCTAAAACAA+GGG | + | chr5.3:23331477-23331496 | MS.gene45048:intron | 15.0% |
| !! | AAAAATGGAGAGTTAATATT+TGG | - | chr5.3:23331598-23331617 | None:intergenic | 20.0% |
| !! | AATTCAGGATAATAATTGTA+AGG | + | chr5.3:23328868-23328887 | MS.gene45048:intron | 20.0% |
| !! | ACTTAAACGTAAATAATCTA+CGG | - | chr5.3:23329063-23329082 | None:intergenic | 20.0% |
| !! | ATTAACAACATTGTAATATG+TGG | - | chr5.3:23330763-23330782 | None:intergenic | 20.0% |
| !! | CAAGTAAAAACAATAACAAA+TGG | - | chr5.3:23327792-23327811 | None:intergenic | 20.0% |
| !! | GACATATACTAAATTATTAG+AGG | - | chr5.3:23328804-23328823 | None:intergenic | 20.0% |
| !! | GTAGATATTAGAAATTTGAT+TGG | + | chr5.3:23327681-23327700 | MS.gene45048:intron | 20.0% |
| !! | GTGAAAATAAATTTGAGAAA+TGG | - | chr5.3:23327749-23327768 | None:intergenic | 20.0% |
| !! | TACTTGCATATTGTATTTAA+TGG | + | chr5.3:23327806-23327825 | MS.gene45048:intron | 20.0% |
| !!! | AAAAGGTAATTGAATTTTCA+GGG | - | chr5.3:23328137-23328156 | None:intergenic | 20.0% |
| !!! | AAAGTATCAAATACCTTTTT+GGG | - | chr5.3:23328776-23328795 | None:intergenic | 20.0% |
| !!! | AAATATTAACTCTCCATTTT+TGG | + | chr5.3:23331597-23331616 | MS.gene45048:intron | 20.0% |
| !!! | AATAAGCTAAAAACAGTTTT+TGG | + | chr5.3:23329845-23329864 | MS.gene45048:intron | 20.0% |
| !!! | AGGTTTAATTGTTGTTTATT+GGG | + | chr5.3:23327162-23327181 | MS.gene45048:intron | 20.0% |
| !!! | CAAAATTTTGACTAAAATTC+CGG | + | chr5.3:23327609-23327628 | MS.gene45048:intron | 20.0% |
| !!! | CACAAAAATATTGAATTTTC+GGG | - | chr5.3:23327087-23327106 | None:intergenic | 20.0% |
| !!! | TAGGTTTAATTGTTGTTTAT+TGG | + | chr5.3:23327161-23327180 | MS.gene45048:intron | 20.0% |
| !!! | TGTTGTTAATTTTAAGATTG+CGG | + | chr5.3:23330773-23330792 | MS.gene45048:intron | 20.0% |
| !!! | TTGATTATGATTGTGTTTTT+AGG | + | chr5.3:23327292-23327311 | MS.gene45048:intron | 20.0% |
| !!! | TTTTTTTTTTCCTTCAAGTT+GGG | + | chr5.3:23329994-23330013 | MS.gene45048:intron | 20.0% |
| ! | AAAAAAAACACAGCAATAAG+CGG | - | chr5.3:23330039-23330058 | None:intergenic | 25.0% |
| ! | AACCATTATGTATTACTGTT+AGG | - | chr5.3:23331456-23331475 | None:intergenic | 25.0% |
| ! | AATGTCTATATTGAATCTCT+TGG | + | chr5.3:23328949-23328968 | MS.gene45048:intron | 25.0% |
| ! | ACCATTATGTATTACTGTTA+GGG | - | chr5.3:23331455-23331474 | None:intergenic | 25.0% |
| ! | AGAAACATTGAATCTCATAT+TGG | + | chr5.3:23327882-23327901 | MS.gene45048:intron | 25.0% |
| ! | ATAACAGAAGATAAACCATT+TGG | - | chr5.3:23326992-23327011 | None:intergenic | 25.0% |
| ! | CTGAAATAAAGAACCAAAAA+TGG | - | chr5.3:23331613-23331632 | None:intergenic | 25.0% |
| ! | GTAGATTATTTACGTTTAAG+TGG | + | chr5.3:23329062-23329081 | MS.gene45048:intron | 25.0% |
| ! | GTTAATATTTGGAGAAGAAA+AGG | - | chr5.3:23331587-23331606 | None:intergenic | 25.0% |
| ! | TAGCAGTACTATTGTAATAT+AGG | - | chr5.3:23327584-23327603 | None:intergenic | 25.0% |
| ! | TAGTTTGGCAAAAAAAATTC+AGG | + | chr5.3:23328853-23328872 | MS.gene45048:intron | 25.0% |
| ! | TCAGAGTTGTAAAATTTCAA+TGG | - | chr5.3:23331328-23331347 | None:intergenic | 25.0% |
| ! | TTATGCTGATAAATGAACAA+GGG | - | chr5.3:23327111-23327130 | None:intergenic | 25.0% |
| ! | TTCAGATATATCATACCAAT+AGG | - | chr5.3:23330394-23330413 | None:intergenic | 25.0% |
| ! | TTTATGCTGATAAATGAACA+AGG | - | chr5.3:23327112-23327131 | None:intergenic | 25.0% |
| !! | AAGTATCAAATACCTTTTTG+GGG | - | chr5.3:23328775-23328794 | None:intergenic | 25.0% |
| !! | ATTAATTTTGCTCTTCAAGA+TGG | + | chr5.3:23327439-23327458 | MS.gene45048:intron | 25.0% |
| !! | ATTGAAATTTTACAACTCTG+AGG | + | chr5.3:23331327-23331346 | MS.gene45048:CDS | 25.0% |
| !! | ATTTGGTATGGTTTATGTTT+TGG | + | chr5.3:23328317-23328336 | MS.gene45048:intron | 25.0% |
| !! | ATTTTCATCAATCAAGGATT+TGG | + | chr5.3:23327535-23327554 | MS.gene45048:intron | 25.0% |
| !! | CAAAAGGTAATTGAATTTTC+AGG | - | chr5.3:23328138-23328157 | None:intergenic | 25.0% |
| !! | CTTTGCACAAAATAGATTTT+AGG | - | chr5.3:23330079-23330098 | None:intergenic | 25.0% |
| !! | GAAACGCCTTATAATTTTTA+TGG | + | chr5.3:23330411-23330430 | MS.gene45048:intron | 25.0% |
| !! | TATAACATGCTTTTCGATTA+GGG | + | chr5.3:23331149-23331168 | MS.gene45048:intron | 25.0% |
| !! | TTCTATTTTCTGTTAGGTTT+TGG | + | chr5.3:23329462-23329481 | MS.gene45048:intron | 25.0% |
| !! | TTTTCATCAATCAAGGATTT+GGG | + | chr5.3:23327536-23327555 | MS.gene45048:intron | 25.0% |
| !!! | AATATTGAATTTTCGGGAAA+AGG | - | chr5.3:23327081-23327100 | None:intergenic | 25.0% |
| !!! | CAAAGTATCAAATACCTTTT+TGG | - | chr5.3:23328777-23328796 | None:intergenic | 25.0% |
| !!! | CTTTTTTTTTTCCTTCAAGT+TGG | + | chr5.3:23329993-23330012 | MS.gene45048:intron | 25.0% |
| AAACAGAACTAGTACTATGA+AGG | - | chr5.3:23328615-23328634 | None:intergenic | 30.0% | |
| AAACTATTTGCAAGAGTTCA+CGG | - | chr5.3:23329889-23329908 | None:intergenic | 30.0% | |
| AAATAGAGACTATAGCATAC+CGG | - | chr5.3:23327631-23327650 | None:intergenic | 30.0% | |
| AACAGAACTAGTACTATGAA+GGG | - | chr5.3:23328614-23328633 | None:intergenic | 30.0% | |
| AACTTATGATGCAGTTATTG+TGG | + | chr5.3:23330357-23330376 | MS.gene45048:CDS | 30.0% | |
| ACCCTAACAGTAATACATAA+TGG | + | chr5.3:23331451-23331470 | MS.gene45048:intron | 30.0% | |
| AGTGAAGTGATTAAGAAACA+TGG | - | chr5.3:23330259-23330278 | None:intergenic | 30.0% | |
| ATCTGATTATCAGGATGTTA+TGG | + | chr5.3:23328544-23328563 | MS.gene45048:CDS | 30.0% | |
| CAACATTGTAATATGTGGAA+AGG | - | chr5.3:23330758-23330777 | None:intergenic | 30.0% | |
| CATTTGTGAAATAGACAAGA+TGG | + | chr5.3:23329552-23329571 | MS.gene45048:CDS | 30.0% | |
| CTTAATCACTTCACTGTTTA+GGG | + | chr5.3:23330264-23330283 | MS.gene45048:intron | 30.0% | |
| CTTATTCTCATAAATTCTCC+AGG | - | chr5.3:23329831-23329850 | None:intergenic | 30.0% | |
| GAATACATAACCAACACAAT+TGG | - | chr5.3:23331101-23331120 | None:intergenic | 30.0% | |
| GACATACTATCATCTTACTT+GGG | + | chr5.3:23329642-23329661 | MS.gene45048:intron | 30.0% | |
| GTTTCAAATCAACTATCTAG+TGG | - | chr5.3:23330992-23331011 | None:intergenic | 30.0% | |
| TAAGAACGTGTGATTAATGA+TGG | - | chr5.3:23328042-23328061 | None:intergenic | 30.0% | |
| TATATCAGGGAAAAGTTGTT+TGG | - | chr5.3:23330170-23330189 | None:intergenic | 30.0% | |
| TATATTTCGCTGCAAACATT+TGG | + | chr5.3:23328300-23328319 | MS.gene45048:intron | 30.0% | |
| TATTATATGTCGAAGAGAGT+AGG | + | chr5.3:23329299-23329318 | MS.gene45048:intron | 30.0% | |
| TCAAGGAAAATCTGATTATC+AGG | + | chr5.3:23328535-23328554 | MS.gene45048:CDS | 30.0% | |
| TCAATCATCATCAGTCATAA+TGG | + | chr5.3:23331028-23331047 | MS.gene45048:intron | 30.0% | |
| TCCCTAAATTCAAGAGAAAT+GGG | - | chr5.3:23327378-23327397 | None:intergenic | 30.0% | |
| TCTTAATCACTTCACTGTTT+AGG | + | chr5.3:23330263-23330282 | MS.gene45048:intron | 30.0% | |
| TCTTGCAAATAGTTTCACAA+GGG | + | chr5.3:23329894-23329913 | MS.gene45048:intron | 30.0% | |
| TGAAGGAAAAAAAAAAGCGA+GGG | - | chr5.3:23329990-23330009 | None:intergenic | 30.0% | |
| TGAATCTCATATTGGTCATA+GGG | + | chr5.3:23327890-23327909 | MS.gene45048:intron | 30.0% | |
| TGACATACTATCATCTTACT+TGG | + | chr5.3:23329641-23329660 | MS.gene45048:intron | 30.0% | |
| TTAACTCTTTGATCAGTTGT+AGG | + | chr5.3:23328185-23328204 | MS.gene45048:intron | 30.0% | |
| TTCCCTAAATTCAAGAGAAA+TGG | - | chr5.3:23327379-23327398 | None:intergenic | 30.0% | |
| TTGAAGGAAAAAAAAAAGCG+AGG | - | chr5.3:23329991-23330010 | None:intergenic | 30.0% | |
| TTGAATCTCATATTGGTCAT+AGG | + | chr5.3:23327889-23327908 | MS.gene45048:intron | 30.0% | |
| TTTCTAACAAGACTTTGCTT+TGG | - | chr5.3:23328422-23328441 | None:intergenic | 30.0% | |
| ! | AACTTTGTTGTAATTTGCAG+GGG | + | chr5.3:23328478-23328497 | MS.gene45048:intron | 30.0% |
| ! | AGGGATAACTTTTCTAATGA+TGG | + | chr5.3:23330283-23330302 | MS.gene45048:intron | 30.0% |
| ! | ATTGACTTTCTGATGTAGTT+TGG | + | chr5.3:23328838-23328857 | MS.gene45048:intron | 30.0% |
| ! | CTATAACATGCTTTTCGATT+AGG | + | chr5.3:23331148-23331167 | MS.gene45048:intron | 30.0% |
| ! | CTATCTTTTCTACTGAAGAA+TGG | - | chr5.3:23329531-23329550 | None:intergenic | 30.0% |
| ! | GAACTTTGTTGTAATTTGCA+GGG | + | chr5.3:23328477-23328496 | MS.gene45048:intron | 30.0% |
| ! | GTTAAGTTGTTTATCCAAAC+AGG | - | chr5.3:23329669-23329688 | None:intergenic | 30.0% |
| ! | TGAACTTTGTTGTAATTTGC+AGG | + | chr5.3:23328476-23328495 | MS.gene45048:intron | 30.0% |
| ! | TTTAAGATTGCGGAAAATAG+CGG | + | chr5.3:23330783-23330802 | MS.gene45048:intron | 30.0% |
| !! | AATTGTTGTTTATTGGGTCA+TGG | + | chr5.3:23327168-23327187 | MS.gene45048:intron | 30.0% |
| !! | GTATTTTTACAAAAGTGTGC+AGG | - | chr5.3:23328447-23328466 | None:intergenic | 30.0% |
| !! | GTCATCTTAGAGTTTGTTTT+AGG | - | chr5.3:23331430-23331449 | None:intergenic | 30.0% |
| !! | GTTGATTTGAAACTGCAAAA+TGG | + | chr5.3:23330999-23331018 | MS.gene45048:intron | 30.0% |
| !! | TACAGAGTGTTGTCAAATAA+CGG | - | chr5.3:23329191-23329210 | None:intergenic | 30.0% |
| !! | TGAAAGTATCAATTTCTCTG+TGG | + | chr5.3:23327262-23327281 | MS.gene45048:intron | 30.0% |
| !!! | CGAGATTTTGGTTTTCTTTA+AGG | + | chr5.3:23328379-23328398 | MS.gene45048:intron | 30.0% |
| !!! | TCTTATTTTCTGTATCCTCT+TGG | + | chr5.3:23331072-23331091 | MS.gene45048:intron | 30.0% |
| !!! | TTTTTTTTTCCTTCGTCATG+CGG | + | chr5.3:23330053-23330072 | MS.gene45048:intron | 30.0% |
| AAGGAAAAAAAAAAGCGAGG+GGG | - | chr5.3:23329988-23330007 | None:intergenic | 35.0% | |
| AATATGTGGAAAGGATCACA+GGG | - | chr5.3:23330749-23330768 | None:intergenic | 35.0% | |
| AATGACAAATCATGGGAACT+GGG | - | chr5.3:23328266-23328285 | None:intergenic | 35.0% | |
| AATGTTTCTCTCACAAGACA+TGG | - | chr5.3:23327871-23327890 | None:intergenic | 35.0% | |
| AATTGTCGCCAAGTATTCAA+AGG | + | chr5.3:23330625-23330644 | MS.gene45048:CDS | 35.0% | |
| AATTGTGAAAGAACACACCT+TGG | - | chr5.3:23330688-23330707 | None:intergenic | 35.0% | |
| ACAGAACTAGTACTATGAAG+GGG | - | chr5.3:23328613-23328632 | None:intergenic | 35.0% | |
| ACTATGCTTGAACACTTAAG+TGG | + | chr5.3:23330904-23330923 | MS.gene45048:intron | 35.0% | |
| AGCCCATTTCTCTTGAATTT+AGG | + | chr5.3:23327373-23327392 | MS.gene45048:intron | 35.0% | |
| AGTTGTAGGTTCTTTCTCAT+TGG | + | chr5.3:23328199-23328218 | MS.gene45048:intron | 35.0% | |
| ATACAAACCACTCTTGAGAA+TGG | + | chr5.3:23329354-23329373 | MS.gene45048:intron | 35.0% | |
| ATATAAAACAAGTGTGCAGC+AGG | - | chr5.3:23329014-23329033 | None:intergenic | 35.0% | |
| ATATGTAGATGGTTGCTTAG+AGG | + | chr5.3:23328913-23328932 | MS.gene45048:intron | 35.0% | |
| ATGGTTGCTTAGAGGAATTT+GGG | + | chr5.3:23328921-23328940 | MS.gene45048:intron | 35.0% | |
| ATTGTGAAAGAACACACCTT+GGG | - | chr5.3:23330687-23330706 | None:intergenic | 35.0% | |
| CAAAAACACAGTATGAGTGT+TGG | - | chr5.3:23331558-23331577 | None:intergenic | 35.0% | |
| CAAAACCTACTGCTATATCA+GGG | - | chr5.3:23330183-23330202 | None:intergenic | 35.0% | |
| CCTAACAGAAAATAGAAGTG+AGG | - | chr5.3:23329459-23329478 | None:intergenic | 35.0% | |
| CGAAATAGCATATCACAGAA+CGG | + | chr5.3:23330863-23330882 | MS.gene45048:intron | 35.0% | |
| CTCTTGCAAATAGTTTCACA+AGG | + | chr5.3:23329893-23329912 | MS.gene45048:intron | 35.0% | |
| CTGAGCTACTTAAGAACAAA+AGG | - | chr5.3:23328154-23328173 | None:intergenic | 35.0% | |
| CTTTAGCACTGTAGCATAAT+GGG | - | chr5.3:23329168-23329187 | None:intergenic | 35.0% | |
| GAAGATAAACCATTTGGTTG+AGG | - | chr5.3:23326986-23327005 | None:intergenic | 35.0% | |
| GAAGGAAAAAAAAAAGCGAG+GGG | - | chr5.3:23329989-23330008 | None:intergenic | 35.0% | |
| GCCCATTTCTCTTGAATTTA+GGG | + | chr5.3:23327374-23327393 | MS.gene45048:intron | 35.0% | |
| GCTTCATATGCATATCATTG+AGG | + | chr5.3:23330591-23330610 | MS.gene45048:CDS | 35.0% | |
| GGTTTATCTTCTGTTATTCC+TGG | + | chr5.3:23326995-23327014 | MS.gene45048:CDS | 35.0% | |
| GTGGAAAAGATTCTGTTTCA+AGG | + | chr5.3:23328518-23328537 | MS.gene45048:CDS | 35.0% | |
| TAATATGTGGAAAGGATCAC+AGG | - | chr5.3:23330750-23330769 | None:intergenic | 35.0% | |
| TAATGACAAATCATGGGAAC+TGG | - | chr5.3:23328267-23328286 | None:intergenic | 35.0% | |
| TATTCGCTATTTGACAACAC+TGG | + | chr5.3:23329274-23329293 | MS.gene45048:intron | 35.0% | |
| TCAAAACCTACTGCTATATC+AGG | - | chr5.3:23330184-23330203 | None:intergenic | 35.0% | |
| TGATCAGTGTTGTCAAATAG+CGG | - | chr5.3:23330938-23330957 | None:intergenic | 35.0% | |
| TGGAATGTTGGATCATTACA+AGG | + | chr5.3:23329374-23329393 | MS.gene45048:intron | 35.0% | |
| TGGCTATCATTCTCATCAAT+AGG | - | chr5.3:23331292-23331311 | None:intergenic | 35.0% | |
| TTCTCATCAATAGGATTCAC+CGG | - | chr5.3:23331283-23331302 | None:intergenic | 35.0% | |
| TTGAAAAGTTACGCAAGGAA+TGG | - | chr5.3:23329409-23329428 | None:intergenic | 35.0% | |
| TTGAAGTCTTCTTTCTTTGC+AGG | + | chr5.3:23330141-23330160 | MS.gene45048:intron | 35.0% | |
| TTGGTTGAATATGCATATGC+TGG | + | chr5.3:23328336-23328355 | MS.gene45048:intron | 35.0% | |
| TTTAGAAGCAATTGCTCTCT+TGG | - | chr5.3:23331670-23331689 | None:intergenic | 35.0% | |
| TTTATGCTTTGCTCAACTGA+GGG | + | chr5.3:23331235-23331254 | MS.gene45048:CDS | 35.0% | |
| TTTCAGCTTTCAACCTCAAA+AGG | - | chr5.3:23327842-23327861 | None:intergenic | 35.0% | |
| TTTCGGGAAAAGGAAGAAAA+GGG | - | chr5.3:23327071-23327090 | None:intergenic | 35.0% | |
| TTTGTTCTTAAGTAGCTCAG+TGG | + | chr5.3:23328154-23328173 | MS.gene45048:intron | 35.0% | |
| ! | CCTCACTTCTATTTTCTGTT+AGG | + | chr5.3:23329456-23329475 | MS.gene45048:intron | 35.0% |
| ! | GAAGTAGATCTTCGAGATTT+TGG | + | chr5.3:23328367-23328386 | MS.gene45048:intron | 35.0% |
| ! | GGACACATTTTCATCAATCA+AGG | + | chr5.3:23327529-23327548 | MS.gene45048:intron | 35.0% |
| ! | GTGTTTTGCAGAGTGTAAAT+GGG | - | chr5.3:23330724-23330743 | None:intergenic | 35.0% |
| ! | GTTTTGTAGTCAGCAACATA+TGG | + | chr5.3:23328650-23328669 | MS.gene45048:intron | 35.0% |
| ! | TCTAGGAGTTGCATTTTTGA+AGG | + | chr5.3:23330321-23330340 | MS.gene45048:intron | 35.0% |
| ! | TGATATAGCAGTAGGTTTTG+AGG | + | chr5.3:23330183-23330202 | MS.gene45048:CDS | 35.0% |
| ! | TGTGTTTTGCAGAGTGTAAA+TGG | - | chr5.3:23330725-23330744 | None:intergenic | 35.0% |
| ! | TTTTATGCTTTGCTCAACTG+AGG | + | chr5.3:23331234-23331253 | MS.gene45048:CDS | 35.0% |
| ! | TTTTCAAAAAGCTCTTGAGC+AGG | - | chr5.3:23330499-23330518 | None:intergenic | 35.0% |
| ! | TTTTGCTCTTCAAGATGGAT+TGG | + | chr5.3:23327444-23327463 | MS.gene45048:intron | 35.0% |
| !! | ATATGGCAAGGTTCTTGTTT+TGG | + | chr5.3:23328667-23328686 | MS.gene45048:CDS | 35.0% |
| !! | CGTGTTTTTATAAGTTGTCC+TGG | + | chr5.3:23329810-23329829 | MS.gene45048:intron | 35.0% |
| !! | TTCTGTTAGGTTTTGGTCAT+TGG | + | chr5.3:23329469-23329488 | MS.gene45048:intron | 35.0% |
| !! | TTTTCGGGAAAAGGAAGAAA+AGG | - | chr5.3:23327072-23327091 | None:intergenic | 35.0% |
| !! | TTTTGTTTCAGTGGGATGAT+TGG | + | chr5.3:23331211-23331230 | MS.gene45048:intron | 35.0% |
| !!! | AGTTTGTTTTAGGCCTCATT+AGG | - | chr5.3:23331420-23331439 | None:intergenic | 35.0% |
| !!! | GTTTGTTTTAGGCCTCATTA+GGG | - | chr5.3:23331419-23331438 | None:intergenic | 35.0% |
| !!! | TCAAATACCTTTTTGGGGTT+TGG | - | chr5.3:23328770-23328789 | None:intergenic | 35.0% |
| !!! | TGAAAAGCCCTTTTTTGAGT+CGG | + | chr5.3:23330513-23330532 | MS.gene45048:CDS | 35.0% |
| !!! | TTTTTTCCTTCAAGTTGGGT+GGG | + | chr5.3:23329998-23330017 | MS.gene45048:intron | 35.0% |
| !!! | TTTTTTTCCTTCAAGTTGGG+TGG | + | chr5.3:23329997-23330016 | MS.gene45048:intron | 35.0% |
| AAAAGACCCACAAACAAGTC+AGG | - | chr5.3:23331530-23331549 | None:intergenic | 40.0% | |
| ACAGCAGCACTATAATGTAG+TGG | - | chr5.3:23329255-23329274 | None:intergenic | 40.0% | |
| ACTGCATCATAAGTTCCTTC+TGG | - | chr5.3:23330352-23330371 | None:intergenic | 40.0% | |
| AGGAAAAAAAAAAGCGAGGG+GGG | - | chr5.3:23329987-23330006 | None:intergenic | 40.0% | |
| ATATGTCGAAGAGAGTAGGA+AGG | + | chr5.3:23329303-23329322 | MS.gene45048:intron | 40.0% | |
| ATGAGTGATCATCTCTTGGT+AGG | - | chr5.3:23328729-23328748 | None:intergenic | 40.0% | |
| ATTGCTCTCTTGGCAAAAGA+TGG | - | chr5.3:23331660-23331679 | None:intergenic | 40.0% | |
| CAACATTCCATTCTCAAGAG+TGG | - | chr5.3:23329364-23329383 | None:intergenic | 40.0% | |
| CACTCTTGAGAATGGAATGT+TGG | + | chr5.3:23329362-23329381 | MS.gene45048:intron | 40.0% | |
| CCAAAAGAACCTCAACCAAA+TGG | + | chr5.3:23326974-23326993 | MS.gene45048:CDS | 40.0% | |
| CCACGTGTGACACTTAATAT+CGG | + | chr5.3:23330208-23330227 | MS.gene45048:CDS | 40.0% | |
| CGTTACAGTGTTGTCAATCT+CGG | + | chr5.3:23329114-23329133 | MS.gene45048:intron | 40.0% | |
| CTCAATTCCAAACCCCAAAA+AGG | + | chr5.3:23328760-23328779 | MS.gene45048:CDS | 40.0% | |
| CTGTATGAAATCACGTCTCA+CGG | + | chr5.3:23329206-23329225 | MS.gene45048:intron | 40.0% | |
| GAAGATCAACTACCTCACAA+CGG | + | chr5.3:23326935-23326954 | MS.gene45048:CDS | 40.0% | |
| GAAGATGAGTGATCATCTCT+TGG | - | chr5.3:23328733-23328752 | None:intergenic | 40.0% | |
| GATGGTTGCTTAGAGGAATT+TGG | + | chr5.3:23328920-23328939 | MS.gene45048:intron | 40.0% | |
| GCAACTCCTAGATCATTGAA+AGG | - | chr5.3:23330313-23330332 | None:intergenic | 40.0% | |
| GCTTTAGCACTGTAGCATAA+TGG | - | chr5.3:23329169-23329188 | None:intergenic | 40.0% | |
| GCTTTAGTGACATAGGACTT+AGG | + | chr5.3:23331499-23331518 | MS.gene45048:intron | 40.0% | |
| GGTTTGCCTTTCAATGATCT+AGG | + | chr5.3:23330304-23330323 | MS.gene45048:intron | 40.0% | |
| GTCATAAGAGAAAACGAACC+AGG | - | chr5.3:23327049-23327068 | None:intergenic | 40.0% | |
| GTGGATTCATCTGATCCTAT+TGG | + | chr5.3:23330376-23330395 | MS.gene45048:CDS | 40.0% | |
| GTTACAGTGTTGTCAATCTC+GGG | + | chr5.3:23329115-23329134 | MS.gene45048:intron | 40.0% | |
| TATCTTCTGTTATTCCTGGC+TGG | + | chr5.3:23326999-23327018 | MS.gene45048:CDS | 40.0% | |
| TATGTTTGGATGGAGGGTTT+AGG | + | chr5.3:23327939-23327958 | MS.gene45048:intron | 40.0% | |
| TATTGGTCATAGGGTGAAAG+TGG | + | chr5.3:23327899-23327918 | MS.gene45048:intron | 40.0% | |
| TCTTCTCTTTGCCTCTTCAA+GGG | - | chr5.3:23326905-23326924 | None:intergenic | 40.0% | |
| TGACAGAGCCTTTGAATACT+TGG | - | chr5.3:23330636-23330655 | None:intergenic | 40.0% | |
| TGATTGTCAGCTGTTAGTTG+TGG | + | chr5.3:23327208-23327227 | MS.gene45048:intron | 40.0% | |
| TTATGCTTTGCTCAACTGAG+GGG | + | chr5.3:23331236-23331255 | MS.gene45048:CDS | 40.0% | |
| TTCGCTGCAAACATTTGGTA+TGG | + | chr5.3:23328305-23328324 | MS.gene45048:intron | 40.0% | |
| TTCTTCTCTTTGCCTCTTCA+AGG | - | chr5.3:23326906-23326925 | None:intergenic | 40.0% | |
| ! | AACAAGGGCTTTAGTGACAT+AGG | + | chr5.3:23331492-23331511 | MS.gene45048:intron | 40.0% |
| ! | CCATTTGGTTGAGGTTCTTT+TGG | - | chr5.3:23326977-23326996 | None:intergenic | 40.0% |
| ! | CTTGCAACCGACTCAAAAAA+GGG | - | chr5.3:23330523-23330542 | None:intergenic | 40.0% |
| ! | CTTTTCCCTGATATAGCAGT+AGG | + | chr5.3:23330175-23330194 | MS.gene45048:CDS | 40.0% |
| ! | TGGTATAGTGTCACCTTTTG+AGG | + | chr5.3:23327826-23327845 | MS.gene45048:intron | 40.0% |
| ! | TTTGTTGTAATTTGCAGGGG+AGG | + | chr5.3:23328481-23328500 | MS.gene45048:intron | 40.0% |
| ! | TTTTAGGCCTCATTAGGGTT+TGG | - | chr5.3:23331414-23331433 | None:intergenic | 40.0% |
| !! | ATTTTCAGGGTCTGTTTCAG+AGG | - | chr5.3:23328124-23328143 | None:intergenic | 40.0% |
| !! | TCTCTGAAATTAGCCCAATG+TGG | + | chr5.3:23327023-23327042 | MS.gene45048:CDS | 40.0% |
| !! | TGTTAGGTTTTGGTCATTGG+TGG | + | chr5.3:23329472-23329491 | MS.gene45048:intron | 40.0% |
| !! | TTTTCAGGGTCTGTTTCAGA+GGG | - | chr5.3:23328123-23328142 | None:intergenic | 40.0% |
| !!! | CAAGGTTCTTGTTTTGGATG+GGG | + | chr5.3:23328673-23328692 | MS.gene45048:CDS | 40.0% |
| !!! | CTTTTTTGAGTCGGTTGCAA+GGG | + | chr5.3:23330522-23330541 | MS.gene45048:CDS | 40.0% |
| !!! | GCAAGGTTCTTGTTTTGGAT+GGG | + | chr5.3:23328672-23328691 | MS.gene45048:CDS | 40.0% |
| !!! | TAAGGGAAGTTTTGGGGTAA+GGG | - | chr5.3:23331378-23331397 | None:intergenic | 40.0% |
| AAAAAAAAAAGCGAGGGGGG+GGG | - | chr5.3:23329984-23330003 | None:intergenic | 45.0% | |
| AAAACGAACCAGGCCACATT+GGG | - | chr5.3:23327039-23327058 | None:intergenic | 45.0% | |
| AAAGTGGTGATTGAACTCCG+AGG | + | chr5.3:23327915-23327934 | MS.gene45048:intron | 45.0% | |
| AAGGCTCTGTCAACTATGCT+TGG | + | chr5.3:23330644-23330663 | MS.gene45048:CDS | 45.0% | |
| AAGGGAAAATCTGTGGACTC+AGG | - | chr5.3:23326887-23326906 | None:intergenic | 45.0% | |
| AAGTGGTGATTGAACTCCGA+GGG | + | chr5.3:23327916-23327935 | MS.gene45048:intron | 45.0% | |
| AGAACACACCTTGGGTATGT+AGG | - | chr5.3:23330679-23330698 | None:intergenic | 45.0% | |
| AGCGCAGTGTGAGATTTCAA+GGG | + | chr5.3:23327654-23327673 | MS.gene45048:intron | 45.0% | |
| CACGCTTGAAAAGTTACGCA+AGG | - | chr5.3:23329414-23329433 | None:intergenic | 45.0% | |
| CATCTTACTTGGGTCCTGTT+TGG | + | chr5.3:23329652-23329671 | MS.gene45048:intron | 45.0% | |
| CCGATATTAAGTGTCACACG+TGG | - | chr5.3:23330211-23330230 | None:intergenic | 45.0% | |
| CCTCTTCAAGGGAAAATCTG+TGG | - | chr5.3:23326894-23326913 | None:intergenic | 45.0% | |
| CTAATTTCAGAGAACCAGCC+AGG | - | chr5.3:23327016-23327035 | None:intergenic | 45.0% | |
| CTCTTGGAGACCAATTGTGT+TGG | + | chr5.3:23331088-23331107 | MS.gene45048:intron | 45.0% | |
| GAAAAAAAAAAGCGAGGGGG+GGG | - | chr5.3:23329985-23330004 | None:intergenic | 45.0% | |
| GCAAACAGAAAGCTGCTGAA+TGG | - | chr5.3:23331638-23331657 | None:intergenic | 45.0% | |
| GCAGAGTGTAAATGGGAAAG+TGG | - | chr5.3:23330717-23330736 | None:intergenic | 45.0% | |
| GCTATAGAATTGTCGCAGAG+CGG | - | chr5.3:23330821-23330840 | None:intergenic | 45.0% | |
| GGAAAAAAAAAAGCGAGGGG+GGG | - | chr5.3:23329986-23330005 | None:intergenic | 45.0% | |
| GGTCATTCAGCTCACAGAAA+GGG | + | chr5.3:23328694-23328713 | MS.gene45048:CDS | 45.0% | |
| GTAGTCAGCAACATATGGCA+AGG | + | chr5.3:23328655-23328674 | MS.gene45048:intron | 45.0% | |
| GTCAGCTGTTAGTTGTGGTT+TGG | + | chr5.3:23327213-23327232 | MS.gene45048:intron | 45.0% | |
| GTGACACTTAATATCGGCGA+TGG | + | chr5.3:23330214-23330233 | MS.gene45048:CDS | 45.0% | |
| GTTCTTAAGTAGCTCAGTGG+TGG | + | chr5.3:23328157-23328176 | MS.gene45048:intron | 45.0% | |
| TAACTGAAGCTGCATGTACC+TGG | - | chr5.3:23328574-23328593 | None:intergenic | 45.0% | |
| TAGTGACATAGGACTTAGGC+CGG | + | chr5.3:23331503-23331522 | MS.gene45048:intron | 45.0% | |
| TCAGGATGTTATGGTCTTCC+AGG | + | chr5.3:23328553-23328572 | MS.gene45048:CDS | 45.0% | |
| TCTCGGGATGTGGAAAATAG+TGG | + | chr5.3:23329131-23329150 | MS.gene45048:intron | 45.0% | |
| TGTCAACTATGCTTGGACCA+CGG | + | chr5.3:23330651-23330670 | MS.gene45048:CDS | 45.0% | |
| TTTCAGGGTCTGTTTCAGAG+GGG | - | chr5.3:23328122-23328141 | None:intergenic | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | + | chr5.3:23327943-23327962 | MS.gene45048:intron | 45.0% | |
| ! | CAACACAATTGGTCTCCAAG+AGG | - | chr5.3:23331090-23331109 | None:intergenic | 45.0% |
| ! | CAACGCTAAGGGAAGTTTTG+GGG | - | chr5.3:23331384-23331403 | None:intergenic | 45.0% |
| ! | CCAACGCTAAGGGAAGTTTT+GGG | - | chr5.3:23331385-23331404 | None:intergenic | 45.0% |
| ! | CCACAGATTTTCCCTTGAAG+AGG | + | chr5.3:23326891-23326910 | MS.gene45048:CDS | 45.0% |
| ! | CCTTGCAACCGACTCAAAAA+AGG | - | chr5.3:23330524-23330543 | None:intergenic | 45.0% |
| ! | GCCTCATTAGGGTTTGGTTT+GGG | - | chr5.3:23331408-23331427 | None:intergenic | 45.0% |
| ! | GGGTTTGGAATTGAGCAAAG+AGG | - | chr5.3:23328755-23328774 | None:intergenic | 45.0% |
| ! | GTACTCAGGCGGAAAGTATA+TGG | + | chr5.3:23330569-23330588 | MS.gene45048:CDS | 45.0% |
| ! | TTCGGTCGATTTCAAGCATC+CGG | + | chr5.3:23331261-23331280 | MS.gene45048:CDS | 45.0% |
| ! | TTGAACTCCGAGGGTATGTT+TGG | + | chr5.3:23327925-23327944 | MS.gene45048:intron | 45.0% |
| !! | CTTGCGTAACTTTTCAAGCG+TGG | + | chr5.3:23329412-23329431 | MS.gene45048:intron | 45.0% |
| !! | TAGGTTTTGGTCATTGGTGG+AGG | + | chr5.3:23329475-23329494 | MS.gene45048:intron | 45.0% |
| !! | TTTTTGAAGGCAGCTCCAGA+AGG | + | chr5.3:23330334-23330353 | MS.gene45048:CDS | 45.0% |
| !!! | CCTTTTTTGAGTCGGTTGCA+AGG | + | chr5.3:23330521-23330540 | MS.gene45048:CDS | 45.0% |
| !!! | CTAAGGGAAGTTTTGGGGTA+AGG | - | chr5.3:23331379-23331398 | None:intergenic | 45.0% |
| !!! | GGCAAGGTTCTTGTTTTGGA+TGG | + | chr5.3:23328671-23328690 | MS.gene45048:CDS | 45.0% |
| !! | TAAAAAAAATTAACATAAAA+GGG | - | chr5.3:23327414-23327433 | None:intergenic | 5.0% |
| !! | TTAAAAAAAATTAACATAAA+AGG | - | chr5.3:23327415-23327434 | None:intergenic | 5.0% |
| !!! | TTATTATTATTTTTTTGTTT+AGG | + | chr5.3:23330472-23330491 | MS.gene45048:intron | 5.0% |
| AAAAAAAAAGCGAGGGGGGG+GGG | - | chr5.3:23329983-23330002 | None:intergenic | 50.0% | |
| ACCCACAAACAAGTCAGGAC+CGG | - | chr5.3:23331525-23331544 | None:intergenic | 50.0% | |
| ATCTGTGGACTCAGGAAGTG+TGG | - | chr5.3:23326879-23326898 | None:intergenic | 50.0% | |
| CACGTCTCACGGAGTAATAG+TGG | + | chr5.3:23329217-23329236 | MS.gene45048:intron | 50.0% | |
| CAGCGCAGTGTGAGATTTCA+AGG | + | chr5.3:23327653-23327672 | MS.gene45048:intron | 50.0% | |
| CCCAAAACTTCCCTTAGCGT+TGG | + | chr5.3:23331382-23331401 | MS.gene45048:intron | 50.0% | |
| CCTCCATCCAAACATACCCT+CGG | - | chr5.3:23327935-23327954 | None:intergenic | 50.0% | |
| GAAAACGAACCAGGCCACAT+TGG | - | chr5.3:23327040-23327059 | None:intergenic | 50.0% | |
| GAAATTAGCCCAATGTGGCC+TGG | + | chr5.3:23327028-23327047 | MS.gene45048:CDS | 50.0% | |
| GAGAATGATAGCCAGCATGC+AGG | + | chr5.3:23331298-23331317 | MS.gene45048:CDS | 50.0% | |
| GAGATACCCACCCAACTTGA+AGG | - | chr5.3:23330007-23330026 | None:intergenic | 50.0% | |
| GCCCAAACCAAACCCTAATG+AGG | + | chr5.3:23331404-23331423 | MS.gene45048:intron | 50.0% | |
| GGATGCTTGAAATCGACCGA+AGG | - | chr5.3:23331262-23331281 | None:intergenic | 50.0% | |
| GGGTCATTCAGCTCACAGAA+AGG | + | chr5.3:23328693-23328712 | MS.gene45048:CDS | 50.0% | |
| GTGTTGTCAATCTCGGGATG+TGG | + | chr5.3:23329121-23329140 | MS.gene45048:intron | 50.0% | |
| GTTTCAGAGACACCGTTGTG+AGG | - | chr5.3:23326950-23326969 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | + | chr5.3:23327942-23327961 | MS.gene45048:intron | 50.0% | |
| TCAATGGTCTTCCTGCATGC+TGG | - | chr5.3:23331312-23331331 | None:intergenic | 50.0% | |
| TGAGTACACACAACACCTCC+TGG | - | chr5.3:23330556-23330575 | None:intergenic | 50.0% | |
| TTCAGGGTCTGTTTCAGAGG+GGG | - | chr5.3:23328121-23328140 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | + | chr5.3:23327944-23327963 | MS.gene45048:intron | 50.0% | |
| TTGGTCATTGGTGGAGGAGA+TGG | + | chr5.3:23329481-23329500 | MS.gene45048:CDS | 50.0% | |
| ! | ACTCCGAGGGTATGTTTGGA+TGG | + | chr5.3:23327929-23327948 | MS.gene45048:intron | 50.0% |
| ! | AGGTGTTGTGTGTACTCAGG+CGG | + | chr5.3:23330558-23330577 | MS.gene45048:CDS | 50.0% |
| ! | CGAGGGTATGTTTGGATGGA+GGG | + | chr5.3:23327933-23327952 | MS.gene45048:intron | 50.0% |
| ! | GATTTTAGGCCGCATGACGA+AGG | - | chr5.3:23330065-23330084 | None:intergenic | 50.0% |
| ! | GCCAACGCTAAGGGAAGTTT+TGG | - | chr5.3:23331386-23331405 | None:intergenic | 50.0% |
| ! | GGCCTCATTAGGGTTTGGTT+TGG | - | chr5.3:23331409-23331428 | None:intergenic | 50.0% |
| ! | TCTGTTTCAGAGGGGGGTTT+TGG | - | chr5.3:23328114-23328133 | None:intergenic | 50.0% |
| !! | AGGAGGTGTTGTGTGTACTC+AGG | + | chr5.3:23330555-23330574 | MS.gene45048:CDS | 50.0% |
| !! | TTGGTTTGGGCCAACGCTAA+GGG | - | chr5.3:23331395-23331414 | None:intergenic | 50.0% |
| !! | TTTGGTTTGGGCCAACGCTA+AGG | - | chr5.3:23331396-23331415 | None:intergenic | 50.0% |
| !!! | TTTCAGAGGGGGGTTTTGGA+TGG | - | chr5.3:23328110-23328129 | None:intergenic | 50.0% |
| AATGGCGTGAAACTTCCCGC+AGG | - | chr5.3:23329513-23329532 | None:intergenic | 55.0% | |
| AGCAGGAGTTAGCACGGTGA+CGG | - | chr5.3:23328997-23329016 | None:intergenic | 55.0% | |
| AGGGGAGGCTCACTCATTGA+AGG | + | chr5.3:23328496-23328515 | MS.gene45048:intron | 55.0% | |
| CCACGGTTCCTACATACCCA+AGG | + | chr5.3:23330668-23330687 | MS.gene45048:CDS | 55.0% | |
| CCTTGGGTATGTAGGAACCG+TGG | - | chr5.3:23330671-23330690 | None:intergenic | 55.0% | |
| GGAGAGGCAGACTGAGACTA+GGG | - | chr5.3:23329962-23329981 | None:intergenic | 55.0% | |
| GGAGGCTCACTCATTGAAGG+TGG | + | chr5.3:23328499-23328518 | MS.gene45048:CDS | 55.0% | |
| GTCATTGGTGGAGGAGATGG+AGG | + | chr5.3:23329484-23329503 | MS.gene45048:CDS | 55.0% | |
| GTGTGCAGCAGGAGTTAGCA+CGG | - | chr5.3:23329003-23329022 | None:intergenic | 55.0% | |
| TCAGGGTCTGTTTCAGAGGG+GGG | - | chr5.3:23328120-23328139 | None:intergenic | 55.0% | |
| TTGCTCAACTGAGGGGCCTT+CGG | + | chr5.3:23331243-23331262 | MS.gene45048:CDS | 55.0% | |
| ! | CCGAGGGTATGTTTGGATGG+AGG | + | chr5.3:23327932-23327951 | MS.gene45048:intron | 55.0% |
| !! | GCCGGTCCTGACTTGTTTGT+GGG | + | chr5.3:23331521-23331540 | MS.gene45048:intron | 55.0% |
| AGGAGATGGAGGAGTCCTGC+GGG | + | chr5.3:23329495-23329514 | MS.gene45048:CDS | 60.0% | |
| GAGGAGATGGAGGAGTCCTG+CGG | + | chr5.3:23329494-23329513 | MS.gene45048:CDS | 60.0% | |
| GCAGGAGTTAGCACGGTGAC+GGG | - | chr5.3:23328996-23329015 | None:intergenic | 60.0% | |
| GGGAGAGGCAGACTGAGACT+AGG | - | chr5.3:23329963-23329982 | None:intergenic | 60.0% | |
| GTTGCAAGGGCTCTTCGTCC+AGG | + | chr5.3:23330535-23330554 | MS.gene45048:CDS | 60.0% | |
| !! | GGCCGGTCCTGACTTGTTTG+TGG | + | chr5.3:23331520-23331539 | MS.gene45048:intron | 60.0% |
| GCAAGGGCTCTTCGTCCAGG+AGG | + | chr5.3:23330538-23330557 | MS.gene45048:CDS | 65.0% | |
| AAAAGCGAGGGGGGGGGGAG+AGG | - | chr5.3:23329978-23329997 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 23326854 | 23331698 | 23326854 | ID=MS.gene45048 |
| chr5.3 | mRNA | 23326854 | 23331698 | 23326854 | ID=MS.gene45048.t1;Parent=MS.gene45048 |
| chr5.3 | exon | 23326854 | 23327049 | 23326854 | ID=MS.gene45048.t1.exon1;Parent=MS.gene45048.t1 |
| chr5.3 | CDS | 23326854 | 23327049 | 23326854 | ID=cds.MS.gene45048.t1;Parent=MS.gene45048.t1 |
| chr5.3 | exon | 23328498 | 23328574 | 23328498 | ID=MS.gene45048.t1.exon2;Parent=MS.gene45048.t1 |
| chr5.3 | CDS | 23328498 | 23328574 | 23328498 | ID=cds.MS.gene45048.t1;Parent=MS.gene45048.t1 |
| chr5.3 | exon | 23328659 | 23328781 | 23328659 | ID=MS.gene45048.t1.exon3;Parent=MS.gene45048.t1 |
| chr5.3 | CDS | 23328659 | 23328781 | 23328659 | ID=cds.MS.gene45048.t1;Parent=MS.gene45048.t1 |
| chr5.3 | exon | 23329478 | 23329582 | 23329478 | ID=MS.gene45048.t1.exon4;Parent=MS.gene45048.t1 |
| chr5.3 | CDS | 23329478 | 23329582 | 23329478 | ID=cds.MS.gene45048.t1;Parent=MS.gene45048.t1 |
| chr5.3 | exon | 23330163 | 23330235 | 23330163 | ID=MS.gene45048.t1.exon5;Parent=MS.gene45048.t1 |
| chr5.3 | CDS | 23330163 | 23330235 | 23330163 | ID=cds.MS.gene45048.t1;Parent=MS.gene45048.t1 |
| chr5.3 | exon | 23330326 | 23330397 | 23330326 | ID=MS.gene45048.t1.exon6;Parent=MS.gene45048.t1 |
| chr5.3 | CDS | 23330326 | 23330397 | 23330326 | ID=cds.MS.gene45048.t1;Parent=MS.gene45048.t1 |
| chr5.3 | exon | 23330494 | 23330689 | 23330494 | ID=MS.gene45048.t1.exon7;Parent=MS.gene45048.t1 |
| chr5.3 | CDS | 23330494 | 23330689 | 23330494 | ID=cds.MS.gene45048.t1;Parent=MS.gene45048.t1 |
| chr5.3 | exon | 23331222 | 23331348 | 23331222 | ID=MS.gene45048.t1.exon8;Parent=MS.gene45048.t1 |
| chr5.3 | CDS | 23331222 | 23331348 | 23331222 | ID=cds.MS.gene45048.t1;Parent=MS.gene45048.t1 |
| chr5.3 | exon | 23331633 | 23331698 | 23331633 | ID=MS.gene45048.t1.exon9;Parent=MS.gene45048.t1 |
| chr5.3 | CDS | 23331633 | 23331698 | 23331633 | ID=cds.MS.gene45048.t1;Parent=MS.gene45048.t1 |
| Gene Sequence |
| Protein sequence |
