Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45223.t1 | XP_003621331.1 | 85.2 | 365 | 54 | 0 | 2 | 366 | 3 | 367 | 4.10E-181 | 644 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45223.t1 | P93324 | 62.1 | 367 | 130 | 3 | 7 | 366 | 8 | 372 | 4.8e-130 | 465.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45223.t1 | G7L359 | 85.2 | 365 | 54 | 0 | 2 | 366 | 3 | 367 | 2.9e-181 | 644.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049549 | MS.gene45223 | 0.814787 | 1.29E-51 | -1.69E-46 |
MS.gene051127 | MS.gene45223 | 0.817453 | 3.27E-52 | -1.69E-46 |
MS.gene051844 | MS.gene45223 | 0.803045 | 4.20E-49 | -1.69E-46 |
MS.gene052211 | MS.gene45223 | 0.818312 | 2.09E-52 | -1.69E-46 |
MS.gene053887 | MS.gene45223 | 0.823904 | 1.08E-53 | -1.69E-46 |
MS.gene055124 | MS.gene45223 | 0.813945 | 1.98E-51 | -1.69E-46 |
MS.gene055240 | MS.gene45223 | 0.804368 | 2.23E-49 | -1.69E-46 |
MS.gene055959 | MS.gene45223 | 0.817862 | 2.65E-52 | -1.69E-46 |
MS.gene056224 | MS.gene45223 | 0.808666 | 2.77E-50 | -1.69E-46 |
MS.gene056748 | MS.gene45223 | 0.827484 | 1.53E-54 | -1.69E-46 |
MS.gene057550 | MS.gene45223 | 0.965047 | 4.22E-124 | -1.69E-46 |
MS.gene057768 | MS.gene45223 | 0.804011 | 2.65E-49 | -1.69E-46 |
MS.gene058099 | MS.gene45223 | 0.814366 | 1.60E-51 | -1.69E-46 |
MS.gene059037 | MS.gene45223 | 0.801155 | 1.03E-48 | -1.69E-46 |
MS.gene061157 | MS.gene45223 | 0.824111 | 9.63E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45223.t1 | MTR_7g011990 | 85.205 | 365 | 54 | 0 | 2 | 366 | 3 | 367 | 0.0 | 659 |
MS.gene45223.t1 | MTR_7g011900 | 78.108 | 370 | 74 | 3 | 2 | 366 | 3 | 370 | 0.0 | 599 |
MS.gene45223.t1 | MTR_7g012040 | 74.324 | 370 | 89 | 2 | 1 | 366 | 1 | 368 | 0.0 | 575 |
MS.gene45223.t1 | MTR_7g012020 | 72.432 | 370 | 97 | 2 | 1 | 366 | 1 | 369 | 0.0 | 568 |
MS.gene45223.t1 | MTR_7g012090 | 69.811 | 371 | 102 | 3 | 5 | 366 | 6 | 375 | 0.0 | 534 |
MS.gene45223.t1 | MTR_7g012070 | 68.182 | 374 | 109 | 3 | 2 | 366 | 3 | 375 | 0.0 | 531 |
MS.gene45223.t1 | MTR_2g055940 | 68.571 | 350 | 106 | 2 | 20 | 366 | 15 | 363 | 0.0 | 509 |
MS.gene45223.t1 | MTR_1g096310 | 62.125 | 367 | 130 | 3 | 7 | 366 | 8 | 372 | 7.31e-172 | 483 |
MS.gene45223.t1 | MTR_7g012020 | 74.275 | 276 | 66 | 2 | 1 | 272 | 1 | 275 | 2.08e-153 | 434 |
MS.gene45223.t1 | MTR_7g012020 | 75.099 | 253 | 58 | 2 | 1 | 249 | 1 | 252 | 1.67e-140 | 399 |
MS.gene45223.t1 | MTR_1g036460 | 49.866 | 373 | 174 | 6 | 3 | 366 | 2 | 370 | 6.87e-130 | 377 |
MS.gene45223.t1 | MTR_1g036490 | 48.525 | 373 | 179 | 6 | 3 | 366 | 2 | 370 | 1.73e-127 | 370 |
MS.gene45223.t1 | MTR_3g021440 | 52.125 | 353 | 159 | 6 | 20 | 366 | 22 | 370 | 2.24e-120 | 352 |
MS.gene45223.t1 | MTR_3g021430 | 51.247 | 361 | 166 | 6 | 12 | 366 | 1 | 357 | 8.31e-120 | 350 |
MS.gene45223.t1 | MTR_1g036510 | 48.533 | 375 | 178 | 7 | 1 | 366 | 16 | 384 | 6.58e-119 | 349 |
MS.gene45223.t1 | MTR_3g092900 | 45.330 | 364 | 188 | 7 | 8 | 366 | 6 | 363 | 5.13e-106 | 316 |
MS.gene45223.t1 | MTR_5g098170 | 40.503 | 358 | 198 | 8 | 18 | 366 | 12 | 363 | 3.34e-90 | 275 |
MS.gene45223.t1 | MTR_7g118300 | 40.000 | 365 | 209 | 7 | 7 | 366 | 16 | 375 | 8.55e-87 | 267 |
MS.gene45223.t1 | MTR_0591s0010 | 40.220 | 363 | 203 | 10 | 13 | 366 | 20 | 377 | 2.89e-85 | 263 |
MS.gene45223.t1 | MTR_7g118320 | 39.945 | 363 | 206 | 7 | 12 | 366 | 4 | 362 | 1.14e-83 | 258 |
MS.gene45223.t1 | MTR_1g050220 | 41.667 | 336 | 137 | 6 | 25 | 352 | 6 | 290 | 4.22e-81 | 250 |
MS.gene45223.t1 | MTR_1g036510 | 49.275 | 276 | 126 | 6 | 1 | 268 | 16 | 285 | 2.14e-80 | 248 |
MS.gene45223.t1 | MTR_8g068690 | 38.682 | 349 | 203 | 7 | 13 | 353 | 19 | 364 | 1.13e-79 | 249 |
MS.gene45223.t1 | MTR_8g068750 | 37.017 | 362 | 216 | 8 | 13 | 366 | 20 | 377 | 1.35e-78 | 246 |
MS.gene45223.t1 | MTR_8g068870 | 37.941 | 340 | 200 | 6 | 34 | 366 | 28 | 363 | 3.49e-75 | 237 |
MS.gene45223.t1 | MTR_8g024160 | 35.942 | 345 | 178 | 6 | 18 | 359 | 20 | 324 | 1.97e-70 | 223 |
MS.gene45223.t1 | MTR_8g068570 | 40.000 | 330 | 158 | 12 | 13 | 333 | 20 | 318 | 2.83e-69 | 220 |
MS.gene45223.t1 | MTR_6g060290 | 60.656 | 183 | 53 | 4 | 2 | 180 | 3 | 170 | 2.35e-68 | 213 |
MS.gene45223.t1 | MTR_1g036510 | 47.451 | 255 | 120 | 6 | 1 | 247 | 16 | 264 | 2.40e-68 | 216 |
MS.gene45223.t1 | MTR_6g078850 | 37.571 | 354 | 208 | 8 | 20 | 364 | 32 | 381 | 1.03e-65 | 216 |
MS.gene45223.t1 | MTR_2g072790 | 38.344 | 326 | 182 | 10 | 32 | 347 | 20 | 336 | 1.84e-61 | 201 |
MS.gene45223.t1 | MTR_3g096050 | 36.798 | 356 | 197 | 11 | 25 | 366 | 17 | 358 | 8.85e-59 | 194 |
MS.gene45223.t1 | MTR_8g068730 | 32.873 | 362 | 199 | 9 | 13 | 366 | 20 | 345 | 9.94e-57 | 189 |
MS.gene45223.t1 | MTR_8g068690 | 37.736 | 265 | 155 | 6 | 13 | 270 | 19 | 280 | 2.20e-54 | 181 |
MS.gene45223.t1 | MTR_3g096070 | 36.310 | 336 | 170 | 10 | 25 | 349 | 17 | 319 | 1.84e-53 | 180 |
MS.gene45223.t1 | MTR_0017s0100 | 34.891 | 321 | 192 | 10 | 40 | 352 | 44 | 355 | 5.11e-51 | 174 |
MS.gene45223.t1 | MTR_0079s0070 | 35.385 | 325 | 185 | 11 | 40 | 352 | 10 | 321 | 5.58e-51 | 173 |
MS.gene45223.t1 | MTR_4g038440 | 35.385 | 325 | 185 | 11 | 40 | 352 | 44 | 355 | 1.42e-50 | 173 |
MS.gene45223.t1 | MTR_3g083620 | 34.062 | 320 | 195 | 9 | 38 | 351 | 38 | 347 | 3.01e-50 | 172 |
MS.gene45223.t1 | MTR_8g068600 | 35.547 | 256 | 148 | 6 | 45 | 286 | 27 | 279 | 6.20e-46 | 159 |
MS.gene45223.t1 | MTR_1g076940 | 31.111 | 315 | 204 | 6 | 40 | 346 | 33 | 342 | 9.26e-44 | 155 |
MS.gene45223.t1 | MTR_5g074600 | 30.717 | 293 | 188 | 7 | 64 | 347 | 55 | 341 | 2.72e-43 | 154 |
MS.gene45223.t1 | MTR_3g096050 | 39.130 | 253 | 135 | 8 | 25 | 268 | 17 | 259 | 2.51e-42 | 149 |
MS.gene45223.t1 | MTR_8g068740 | 31.408 | 277 | 148 | 7 | 13 | 282 | 20 | 261 | 9.38e-40 | 142 |
MS.gene45223.t1 | MTR_7g014570 | 29.712 | 313 | 202 | 6 | 40 | 346 | 33 | 333 | 1.27e-39 | 144 |
MS.gene45223.t1 | MTR_4g033015 | 32.647 | 340 | 202 | 9 | 39 | 361 | 32 | 361 | 2.56e-39 | 143 |
MS.gene45223.t1 | MTR_5g074680 | 29.897 | 291 | 193 | 6 | 61 | 346 | 57 | 341 | 4.04e-39 | 143 |
MS.gene45223.t1 | MTR_5g074580 | 31.752 | 274 | 177 | 5 | 79 | 347 | 74 | 342 | 6.12e-39 | 142 |
MS.gene45223.t1 | MTR_4g088340 | 27.893 | 337 | 224 | 7 | 37 | 365 | 7 | 332 | 1.36e-38 | 140 |
MS.gene45223.t1 | MTR_4g033200 | 32.353 | 340 | 203 | 9 | 39 | 361 | 32 | 361 | 1.76e-38 | 141 |
MS.gene45223.t1 | MTR_7g024520 | 30.640 | 297 | 170 | 10 | 80 | 364 | 73 | 345 | 3.12e-38 | 140 |
MS.gene45223.t1 | MTR_4g079160 | 30.872 | 298 | 190 | 8 | 61 | 352 | 55 | 342 | 6.66e-38 | 139 |
MS.gene45223.t1 | MTR_4g088345 | 28.530 | 347 | 209 | 10 | 37 | 365 | 30 | 355 | 7.62e-38 | 139 |
MS.gene45223.t1 | MTR_7g024500 | 30.241 | 291 | 179 | 9 | 80 | 364 | 73 | 345 | 7.95e-38 | 139 |
MS.gene45223.t1 | MTR_4g088200 | 30.699 | 329 | 213 | 8 | 33 | 352 | 26 | 348 | 1.04e-37 | 139 |
MS.gene45223.t1 | MTR_7g014510 | 29.043 | 303 | 200 | 7 | 65 | 364 | 62 | 352 | 1.35e-37 | 139 |
MS.gene45223.t1 | MTR_5g074540 | 33.333 | 222 | 143 | 3 | 136 | 352 | 107 | 328 | 2.46e-36 | 135 |
MS.gene45223.t1 | MTR_4g033150 | 30.882 | 340 | 208 | 9 | 39 | 361 | 32 | 361 | 6.72e-36 | 134 |
MS.gene45223.t1 | MTR_8g068620 | 49.091 | 110 | 56 | 0 | 160 | 269 | 2 | 111 | 3.68e-34 | 122 |
MS.gene45223.t1 | MTR_4g088190 | 31.250 | 336 | 205 | 8 | 33 | 352 | 26 | 351 | 1.64e-32 | 125 |
MS.gene45223.t1 | MTR_5g074610 | 36.774 | 155 | 95 | 1 | 201 | 352 | 159 | 313 | 3.10e-30 | 118 |
MS.gene45223.t1 | MTR_1g076930 | 30.417 | 240 | 150 | 7 | 37 | 268 | 7 | 237 | 2.44e-28 | 111 |
MS.gene45223.t1 | MTR_4g033170 | 28.012 | 332 | 220 | 8 | 40 | 361 | 33 | 355 | 3.56e-27 | 110 |
MS.gene45223.t1 | MTR_4g038440 | 32.773 | 238 | 140 | 8 | 40 | 268 | 44 | 270 | 1.09e-26 | 107 |
MS.gene45223.t1 | MTR_4g033085 | 28.358 | 335 | 215 | 10 | 40 | 361 | 33 | 355 | 1.84e-25 | 105 |
MS.gene45223.t1 | MTR_6g060280 | 66.667 | 63 | 15 | 2 | 220 | 277 | 1 | 62 | 1.39e-19 | 82.4 |
MS.gene45223.t1 | MTR_0794s0020 | 29.075 | 227 | 139 | 7 | 39 | 253 | 32 | 248 | 5.13e-19 | 85.9 |
MS.gene45223.t1 | MTR_8g068760 | 40.000 | 100 | 58 | 2 | 268 | 366 | 135 | 233 | 1.55e-16 | 78.6 |
MS.gene45223.t1 | MTR_8g068580 | 44.086 | 93 | 48 | 4 | 276 | 366 | 43 | 133 | 2.56e-13 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45223.t1 | AT5G54160 | 48.000 | 350 | 175 | 5 | 20 | 366 | 16 | 361 | 6.41e-110 | 326 |
MS.gene45223.t1 | AT1G77520 | 40.000 | 355 | 198 | 9 | 24 | 366 | 30 | 381 | 7.46e-83 | 257 |
MS.gene45223.t1 | AT1G51990 | 37.681 | 345 | 206 | 3 | 20 | 357 | 12 | 354 | 9.68e-82 | 254 |
MS.gene45223.t1 | AT1G33030 | 41.040 | 346 | 193 | 8 | 27 | 366 | 10 | 350 | 2.52e-81 | 252 |
MS.gene45223.t1 | AT1G51990 | 37.391 | 345 | 207 | 3 | 20 | 357 | 12 | 354 | 1.01e-80 | 251 |
MS.gene45223.t1 | AT1G63140 | 40.884 | 362 | 193 | 13 | 20 | 366 | 26 | 381 | 2.02e-73 | 233 |
MS.gene45223.t1 | AT1G21100 | 40.395 | 354 | 194 | 7 | 16 | 356 | 15 | 364 | 2.35e-73 | 233 |
MS.gene45223.t1 | AT1G63140 | 40.884 | 362 | 193 | 13 | 20 | 366 | 46 | 401 | 3.21e-73 | 233 |
MS.gene45223.t1 | AT1G21130 | 40.169 | 356 | 196 | 7 | 14 | 356 | 13 | 364 | 2.47e-72 | 230 |
MS.gene45223.t1 | AT1G21110 | 40.113 | 354 | 195 | 7 | 16 | 356 | 15 | 364 | 1.96e-70 | 225 |
MS.gene45223.t1 | AT1G21120 | 39.548 | 354 | 197 | 7 | 16 | 356 | 15 | 364 | 3.20e-69 | 222 |
MS.gene45223.t1 | AT5G53810 | 38.304 | 342 | 197 | 7 | 37 | 366 | 39 | 378 | 4.70e-69 | 221 |
MS.gene45223.t1 | AT1G21120 | 39.548 | 354 | 197 | 7 | 16 | 356 | 63 | 412 | 1.22e-68 | 222 |
MS.gene45223.t1 | AT1G77530 | 38.310 | 355 | 204 | 9 | 24 | 366 | 30 | 381 | 2.75e-68 | 219 |
MS.gene45223.t1 | AT1G76790 | 39.730 | 370 | 193 | 11 | 17 | 366 | 6 | 365 | 4.82e-67 | 216 |
MS.gene45223.t1 | AT3G53140 | 35.328 | 351 | 200 | 9 | 12 | 346 | 1 | 340 | 1.10e-59 | 197 |
MS.gene45223.t1 | AT1G62900 | 46.305 | 203 | 106 | 3 | 166 | 366 | 4 | 205 | 1.46e-57 | 186 |
MS.gene45223.t1 | AT1G33030 | 40.400 | 250 | 140 | 6 | 27 | 271 | 10 | 255 | 1.60e-53 | 178 |
MS.gene45223.t1 | AT1G33030 | 40.486 | 247 | 138 | 6 | 27 | 268 | 10 | 252 | 2.47e-52 | 174 |
MS.gene45223.t1 | AT5G37170 | 34.375 | 320 | 167 | 9 | 56 | 366 | 49 | 334 | 8.08e-52 | 176 |
MS.gene45223.t1 | AT5G37170 | 41.919 | 198 | 111 | 4 | 172 | 366 | 38 | 234 | 6.55e-50 | 167 |
MS.gene45223.t1 | AT5G37170 | 42.246 | 187 | 104 | 4 | 183 | 366 | 1 | 186 | 4.40e-47 | 159 |
MS.gene45223.t1 | AT1G21130 | 40.226 | 266 | 144 | 5 | 14 | 268 | 13 | 274 | 4.71e-45 | 157 |
MS.gene45223.t1 | AT1G63140 | 39.695 | 262 | 140 | 10 | 20 | 268 | 46 | 302 | 1.09e-42 | 151 |
MS.gene45223.t1 | AT4G35160 | 31.003 | 329 | 207 | 9 | 38 | 351 | 44 | 367 | 5.94e-37 | 137 |
MS.gene45223.t1 | AT4G35150 | 32.787 | 244 | 146 | 6 | 125 | 351 | 68 | 310 | 1.40e-36 | 135 |
MS.gene45223.t1 | AT1G77530 | 36.441 | 236 | 138 | 6 | 24 | 249 | 30 | 263 | 3.55e-33 | 125 |
MS.gene45223.t1 | AT1G63140 | 37.975 | 237 | 129 | 10 | 20 | 243 | 46 | 277 | 1.22e-31 | 121 |
Find 67 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTCTGCTTTCTCTATTAT+TGG | 0.128556 | 7.3:+85811762 | MS.gene45223:CDS |
TAAATATAGGATTAACTTTA+AGG | 0.132063 | 7.3:+85810864 | MS.gene45223:intron |
TCATTGATTTGTTGAATAAT+TGG | 0.195679 | 7.3:-85810975 | None:intergenic |
CGAGATGCATTTGTTGCTTC+TGG | 0.211592 | 7.3:-85811624 | None:intergenic |
CACAAAGCTTTGCCTCAAAA+TGG | 0.243448 | 7.3:+85811564 | MS.gene45223:CDS |
TGCAAAATATCCATCAATTA+AGG | 0.257882 | 7.3:+85811113 | MS.gene45223:CDS |
GAGAGTTTGGCTCAACGTTC+TGG | 0.290728 | 7.3:+85811717 | MS.gene45223:CDS |
CTCAACTTGTTTGAAATCAT+TGG | 0.292345 | 7.3:+85807992 | MS.gene45223:CDS |
ATGTGTCATCCTGCTTTGAT+AGG | 0.301521 | 7.3:+85808253 | MS.gene45223:CDS |
AAGTTGATTGCCTTAATTGA+TGG | 0.303709 | 7.3:-85811123 | None:intergenic |
ACACTCTCAGCTATGGTATT+AGG | 0.313041 | 7.3:+85807926 | MS.gene45223:CDS |
GGTAGCATAATGAGTGTTTA+TGG | 0.313050 | 7.3:+85808154 | MS.gene45223:CDS |
CATATCCTTTGTATATTTCA+AGG | 0.318611 | 7.3:-85811029 | None:intergenic |
TCTTGTGGCACATGTACTAT+TGG | 0.327244 | 7.3:+85811596 | MS.gene45223:CDS |
TGCAAAAGAATATGAGAGTT+TGG | 0.338232 | 7.3:+85811704 | MS.gene45223:CDS |
TAACCCAACCTTAAGCATTA+TGG | 0.341590 | 7.3:-85811356 | None:intergenic |
AACTGCAGGAAACACTAAAT+TGG | 0.344342 | 7.3:-85807951 | None:intergenic |
TCTAGGCTGTATGTCATAAT+TGG | 0.370560 | 7.3:+85811505 | MS.gene45223:intron |
AACATACGATCTAGCCGATT+TGG | 0.374943 | 7.3:-85808076 | None:intergenic |
AATAGTGATCATGGTTATCT+TGG | 0.384090 | 7.3:+85808214 | MS.gene45223:CDS |
GTTGATGTTGGAGGTGGAAA+TGG | 0.399088 | 7.3:+85811069 | MS.gene45223:CDS |
GTCTCAAGTTTGGTTGATGT+TGG | 0.402367 | 7.3:+85811057 | MS.gene45223:CDS |
AACACTCTGATTTGCCAAAT+CGG | 0.406765 | 7.3:+85808062 | MS.gene45223:CDS |
AAAGAACAATATACCTGGAA+TGG | 0.419990 | 7.3:-85811178 | None:intergenic |
GTTTATGGGATCACACCTTC+TGG | 0.427376 | 7.3:+85808169 | MS.gene45223:CDS |
GAAAATGCACCACCCATTCC+AGG | 0.430355 | 7.3:+85811165 | MS.gene45223:CDS |
TATCACTATCATCTATTTGT+GGG | 0.435409 | 7.3:-85807904 | None:intergenic |
TGAAATATACAAAGGATATG+AGG | 0.436772 | 7.3:+85811032 | MS.gene45223:CDS |
CTCTTCTGTCTATTTCTACT+CGG | 0.445033 | 7.3:+85808119 | MS.gene45223:CDS |
AGGAGATGCCATAATGCTTA+AGG | 0.462667 | 7.3:+85811348 | MS.gene45223:CDS |
GTAGCATAATGAGTGTTTAT+GGG | 0.463088 | 7.3:+85808155 | MS.gene45223:CDS |
CATTATGCTACCATCATCAT+TGG | 0.464708 | 7.3:-85808143 | None:intergenic |
ATATGAGGGAGTCTCAAGTT+TGG | 0.471735 | 7.3:+85811047 | MS.gene45223:CDS |
GTATCACTATCATCTATTTG+TGG | 0.490917 | 7.3:-85807905 | None:intergenic |
TAAGGATGCAGTACTTGATC+CGG | 0.492794 | 7.3:+85810882 | MS.gene45223:CDS |
GGCAAATCAGAGTGTTGAGT+TGG | 0.494514 | 7.3:-85808055 | None:intergenic |
TATGATGAAAATAGTGATCA+TGG | 0.500039 | 7.3:+85808205 | MS.gene45223:CDS |
TTGAATAATTGGTTTACTTG+AGG | 0.500718 | 7.3:-85810964 | None:intergenic |
AAGAACAATATACCTGGAAT+GGG | 0.505289 | 7.3:-85811177 | None:intergenic |
TTTCTCTATTATTGGAGTGA+TGG | 0.505610 | 7.3:+85811770 | MS.gene45223:CDS |
AATATCTAAGTACGAGTACA+TGG | 0.507809 | 7.3:+85810933 | MS.gene45223:CDS |
TCAAGTTTGGTTGATGTTGG+AGG | 0.510442 | 7.3:+85811060 | MS.gene45223:CDS |
TGTGTCATCCTGCTTTGATA+GGG | 0.514622 | 7.3:+85808254 | MS.gene45223:CDS |
TTGTTTGAAATCATTGGTGA+TGG | 0.517050 | 7.3:+85807998 | MS.gene45223:CDS |
ATCCTGCTTTGATAGGGTTG+TGG | 0.524365 | 7.3:+85808260 | MS.gene45223:CDS |
CATTTAGGGATTGAGCATGT+TGG | 0.530865 | 7.3:+85811298 | MS.gene45223:intron |
ATTGCAGCATTAAGAACTGC+AGG | 0.535869 | 7.3:-85807965 | None:intergenic |
ATCATGTTCATTAATGCTGG+TGG | 0.543605 | 7.3:+85811669 | MS.gene45223:CDS |
AGCATTATGGCATCTCCTTG+TGG | 0.554368 | 7.3:-85811343 | None:intergenic |
AATATCATGTTCATTAATGC+TGG | 0.556116 | 7.3:+85811666 | MS.gene45223:CDS |
AGTTTGGTTGATGTTGGAGG+TGG | 0.559529 | 7.3:+85811063 | MS.gene45223:CDS |
GAAATATACAAAGGATATGA+GGG | 0.561483 | 7.3:+85811033 | MS.gene45223:CDS |
GGCTGTATGTCATAATTGGT+CGG | 0.563483 | 7.3:+85811509 | MS.gene45223:intron |
TTAGGGATTGAGCATGTTGG+AGG | 0.570708 | 7.3:+85811301 | MS.gene45223:intron |
TACCACAACCCTATCAAAGC+AGG | 0.575416 | 7.3:-85808262 | None:intergenic |
TAGTGATACACTCTCAGCTA+TGG | 0.578762 | 7.3:+85807919 | MS.gene45223:CDS |
AACAATATACCTGGAATGGG+TGG | 0.581952 | 7.3:-85811174 | None:intergenic |
TCTACTCGGACCAATGATGA+TGG | 0.584557 | 7.3:+85808133 | MS.gene45223:CDS |
ATCACTATCATCTATTTGTG+GGG | 0.595648 | 7.3:-85807903 | None:intergenic |
AAATGGAAAGGTCATTCTTG+TGG | 0.596549 | 7.3:+85811581 | MS.gene45223:CDS |
TAAGTACGAGTACATGGGAA+AGG | 0.606162 | 7.3:+85810939 | MS.gene45223:CDS |
AGCTTTGCCTCAAAATGGAA+AGG | 0.610192 | 7.3:+85811569 | MS.gene45223:CDS |
GGATGCAGTACTTGATCCGG+AGG | 0.613278 | 7.3:+85810885 | MS.gene45223:CDS |
AGAATCCTTGAAATATACAA+AGG | 0.621043 | 7.3:+85811024 | MS.gene45223:CDS |
ATATCTAAGTACGAGTACAT+GGG | 0.670164 | 7.3:+85810934 | MS.gene45223:CDS |
GGGTGTGAGATTCAATCACA+TGG | 0.675697 | 7.3:-85807883 | None:intergenic |
ATGTTTGAAAACATTCCACA+AGG | 0.693962 | 7.3:+85811328 | MS.gene45223:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTTTTTTTTTAAATT+GGG | + | chr7.3:85810718-85810737 | MS.gene45223:intron | 0.0% |
!! | AAAATTGTAAAATTTCATTT+AGG | + | chr7.3:85811283-85811302 | MS.gene45223:intron | 10.0% |
!! | AAATTGTAAAATTTCATTTA+GGG | + | chr7.3:85811284-85811303 | MS.gene45223:intron | 10.0% |
!! | ATAGAAACTATTAAATTTAA+AGG | + | chr7.3:85810162-85810181 | MS.gene45223:intron | 10.0% |
!! | TAAAAAAAAATACTTGATTA+TGG | + | chr7.3:85810682-85810701 | MS.gene45223:intron | 10.0% |
!!! | AAAATTTTAATTATTAAGCA+AGG | - | chr7.3:85808298-85808317 | None:intergenic | 10.0% |
!!! | AATGCTAAAATAATATTTTA+AGG | - | chr7.3:85809396-85809415 | None:intergenic | 10.0% |
!!! | ATTTGTTAATTTATTTTAAG+AGG | + | chr7.3:85809498-85809517 | MS.gene45223:intron | 10.0% |
!! | AGTTTAAATAATTATTGAAG+TGG | - | chr7.3:85811244-85811263 | None:intergenic | 15.0% |
!! | ATCAGTTATATGATAAATAT+AGG | + | chr7.3:85810851-85810870 | MS.gene45223:intron | 15.0% |
!! | GACTTATTCAAAAAAATTAA+TGG | + | chr7.3:85810910-85810929 | MS.gene45223:CDS | 15.0% |
!! | TAAATATAGGATTAACTTTA+AGG | + | chr7.3:85810864-85810883 | MS.gene45223:intron | 15.0% |
!! | TATAAAAAAATAAGTAGTCT+TGG | + | chr7.3:85810392-85810411 | MS.gene45223:intron | 15.0% |
!! | TATACAATAAATATACATTG+AGG | - | chr7.3:85810821-85810840 | None:intergenic | 15.0% |
!!! | AAAATTTTCCATTTATATGT+AGG | + | chr7.3:85808310-85808329 | MS.gene45223:intron | 15.0% |
!!! | TAATTAAATTTGTTGTTTGT+TGG | + | chr7.3:85810623-85810642 | MS.gene45223:intron | 15.0% |
!! | AACTATTAAATTTAAAGGCA+CGG | + | chr7.3:85810167-85810186 | MS.gene45223:intron | 20.0% |
!! | AAGAAGAAGGAAAAAAAAAA+TGG | + | chr7.3:85808985-85809004 | MS.gene45223:intron | 20.0% |
!! | AATAGTGAGAGTTATTTATA+GGG | + | chr7.3:85809663-85809682 | MS.gene45223:intron | 20.0% |
!! | AATTAGGATTTGTATTCTAT+CGG | - | chr7.3:85808532-85808551 | None:intergenic | 20.0% |
!! | ACTTATTTAATTAGGATAGA+AGG | + | chr7.3:85808899-85808918 | MS.gene45223:intron | 20.0% |
!! | AGAAGAAGGAAAAAAAAAAT+GGG | + | chr7.3:85808986-85809005 | MS.gene45223:intron | 20.0% |
!! | AGTTAATTATATCTTAATCG+TGG | - | chr7.3:85810746-85810765 | None:intergenic | 20.0% |
!! | CTAATTCAATATGAATTACA+AGG | - | chr7.3:85809618-85809637 | None:intergenic | 20.0% |
!! | GTGAAATCACTTATTTAATT+AGG | + | chr7.3:85808891-85808910 | MS.gene45223:intron | 20.0% |
!! | TAACAAAAATATTTACCAGA+AGG | - | chr7.3:85808187-85808206 | None:intergenic | 20.0% |
!! | TTCTTTACAAGAATATAGTT+TGG | + | chr7.3:85809416-85809435 | MS.gene45223:intron | 20.0% |
!! | TTTCTGTAAGAAAAACATAA+TGG | - | chr7.3:85808354-85808373 | None:intergenic | 20.0% |
!!! | AGGTATATTGTTCTTTAAAA+TGG | + | chr7.3:85811185-85811204 | MS.gene45223:intron | 20.0% |
!!! | ATTTTAAAGAACAATATACC+TGG | - | chr7.3:85811186-85811205 | None:intergenic | 20.0% |
!!! | TCATTGATTTGTTGAATAAT+TGG | - | chr7.3:85810978-85810997 | None:intergenic | 20.0% |
! | AAGAAACTATCACAAAAGAT+AGG | + | chr7.3:85809527-85809546 | MS.gene45223:intron | 25.0% |
! | AATATCATGTTCATTAATGC+TGG | + | chr7.3:85811666-85811685 | MS.gene45223:CDS | 25.0% |
! | AGAATCCTTGAAATATACAA+AGG | + | chr7.3:85811024-85811043 | MS.gene45223:CDS | 25.0% |
! | AGTATATGTAGATTGATCAT+GGG | + | chr7.3:85809057-85809076 | MS.gene45223:intron | 25.0% |
! | CAATAGTGAGAGTTATTTAT+AGG | + | chr7.3:85809662-85809681 | MS.gene45223:intron | 25.0% |
! | CATATCCTTTGTATATTTCA+AGG | - | chr7.3:85811032-85811051 | None:intergenic | 25.0% |
! | CTAATTCGCTAAAAACAAAA+AGG | + | chr7.3:85808546-85808565 | MS.gene45223:intron | 25.0% |
! | GAAACAAACATGAAACTTAA+AGG | - | chr7.3:85809768-85809787 | None:intergenic | 25.0% |
! | GAAATATACAAAGGATATGA+GGG | + | chr7.3:85811033-85811052 | MS.gene45223:CDS | 25.0% |
! | GTCATATTAGTCATATTTGT+AGG | - | chr7.3:85808634-85808653 | None:intergenic | 25.0% |
! | TAGTCATTCCTACATATAAA+TGG | - | chr7.3:85808321-85808340 | None:intergenic | 25.0% |
! | TATCACTATCATCTATTTGT+GGG | - | chr7.3:85807907-85807926 | None:intergenic | 25.0% |
! | TATGATGAAAATAGTGATCA+TGG | + | chr7.3:85808205-85808224 | MS.gene45223:CDS | 25.0% |
! | TGAAATATACAAAGGATATG+AGG | + | chr7.3:85811032-85811051 | MS.gene45223:CDS | 25.0% |
! | TGCAAAATATCCATCAATTA+AGG | + | chr7.3:85811113-85811132 | MS.gene45223:CDS | 25.0% |
! | TTTATATGTAGGAATGACTA+CGG | + | chr7.3:85808321-85808340 | MS.gene45223:intron | 25.0% |
!! | AAAATCGTAGTTTTTGAACA+AGG | + | chr7.3:85808382-85808401 | MS.gene45223:intron | 25.0% |
!! | ATAGATCAACTTTAGCTTAA+CGG | - | chr7.3:85809934-85809953 | None:intergenic | 25.0% |
!! | ATAGGTTCTTTAAGTTTCTA+AGG | - | chr7.3:85810057-85810076 | None:intergenic | 25.0% |
!! | CATATTTCTTTTCGACTTTA+AGG | - | chr7.3:85809159-85809178 | None:intergenic | 25.0% |
!! | GATTCTTTTCATGTGAATTT+TGG | - | chr7.3:85811010-85811029 | None:intergenic | 25.0% |
!! | TTGAATAATTGGTTTACTTG+AGG | - | chr7.3:85810967-85810986 | None:intergenic | 25.0% |
!!! | AAGTTTCTAAAGTTTCAGAT+AGG | + | chr7.3:85809801-85809820 | MS.gene45223:intron | 25.0% |
!!! | ATCATTATTTTGACAAGTCT+TGG | - | chr7.3:85809324-85809343 | None:intergenic | 25.0% |
!!! | CATGTTTCGTTTCTTTTTTT+TGG | + | chr7.3:85810487-85810506 | MS.gene45223:intron | 25.0% |
!!! | CTTTTTGTTTTTAGCGAATT+AGG | - | chr7.3:85808548-85808567 | None:intergenic | 25.0% |
!!! | GCTGTTTTATGTTATTAACA+TGG | - | chr7.3:85808599-85808618 | None:intergenic | 25.0% |
!!! | TTTAAGTTTCGAGTTTGTTT+CGG | + | chr7.3:85809827-85809846 | MS.gene45223:intron | 25.0% |
!!! | TTTAAGTTTCGAGTTTGTTT+CGG | - | chr7.3:85809846-85809827 | None:intergenic | 25.0% |
!!! | TTTTTTGTGAAATTTTCCGA+AGG | + | chr7.3:85810460-85810479 | MS.gene45223:intron | 25.0% |
AAAGAACAATATACCTGGAA+TGG | - | chr7.3:85811181-85811200 | None:intergenic | 30.0% | |
AAGAACAATATACCTGGAAT+GGG | - | chr7.3:85811180-85811199 | None:intergenic | 30.0% | |
AATAGTGATCATGGTTATCT+TGG | + | chr7.3:85808214-85808233 | MS.gene45223:CDS | 30.0% | |
AATATCTAAGTACGAGTACA+TGG | + | chr7.3:85810933-85810952 | MS.gene45223:CDS | 30.0% | |
ATATCTAAGTACGAGTACAT+GGG | + | chr7.3:85810934-85810953 | MS.gene45223:CDS | 30.0% | |
ATCACTATCATCTATTTGTG+GGG | - | chr7.3:85807906-85807925 | None:intergenic | 30.0% | |
ATGAAGTTCATATGAGAAGT+AGG | + | chr7.3:85809565-85809584 | MS.gene45223:intron | 30.0% | |
ATGTTTGAAAACATTCCACA+AGG | + | chr7.3:85811328-85811347 | MS.gene45223:CDS | 30.0% | |
ATTTGGTCAGATGTAAACTA+TGG | - | chr7.3:85809733-85809752 | None:intergenic | 30.0% | |
CAATACCAAGTCAAAATTCT+TGG | + | chr7.3:85810364-85810383 | MS.gene45223:intron | 30.0% | |
CATAATATATGCAATGTCCA+GGG | - | chr7.3:85808414-85808433 | None:intergenic | 30.0% | |
CATAGTTAGTTCAGATGTAA+AGG | - | chr7.3:85810123-85810142 | None:intergenic | 30.0% | |
CTGAAACCTTAGAAACTTAA+AGG | + | chr7.3:85809988-85810007 | MS.gene45223:intron | 30.0% | |
CTGAAATCTTAGACACTTAA+AGG | - | chr7.3:85809859-85809878 | None:intergenic | 30.0% | |
GAAACAAACGTGAAACTTAA+AGG | + | chr7.3:85810079-85810098 | MS.gene45223:intron | 30.0% | |
GAAACAAACTCGAAACTTAA+AGG | - | chr7.3:85810038-85810019 | None:intergenic | 30.0% | |
GAAACAAACTTGACACTTAA+AGG | - | chr7.3:85809888-85809907 | None:intergenic | 30.0% | |
GAGTATATGTAGATTGATCA+TGG | + | chr7.3:85809056-85809075 | MS.gene45223:intron | 30.0% | |
GTAGCATAATGAGTGTTTAT+GGG | + | chr7.3:85808155-85808174 | MS.gene45223:CDS | 30.0% | |
GTATATGTAGATTGATCATG+GGG | + | chr7.3:85809058-85809077 | MS.gene45223:intron | 30.0% | |
GTATCACTATCATCTATTTG+TGG | - | chr7.3:85807908-85807927 | None:intergenic | 30.0% | |
TAAAGGCCAAATACATCTTT+GGG | - | chr7.3:85810106-85810125 | None:intergenic | 30.0% | |
TATGACTATATTCAAGTCTC+CGG | + | chr7.3:85808648-85808667 | MS.gene45223:intron | 30.0% | |
TGCAAAAGAATATGAGAGTT+TGG | + | chr7.3:85811704-85811723 | MS.gene45223:CDS | 30.0% | |
TGTTCTGCTTTCTCTATTAT+TGG | + | chr7.3:85811762-85811781 | MS.gene45223:CDS | 30.0% | |
TTCTTGATGTAGTTCCAAAT+TGG | + | chr7.3:85810320-85810339 | MS.gene45223:intron | 30.0% | |
TTGGAAATCAAGGATGATAA+TGG | + | chr7.3:85810642-85810661 | MS.gene45223:intron | 30.0% | |
TTTCTCTATTATTGGAGTGA+TGG | + | chr7.3:85811770-85811789 | MS.gene45223:CDS | 30.0% | |
! | AAAAAGTCTTTATGATGACG+CGG | - | chr7.3:85810445-85810464 | None:intergenic | 30.0% |
! | AAGTGTCTAAGATTTCAGAT+AGG | + | chr7.3:85809861-85809880 | MS.gene45223:intron | 30.0% |
! | AAGTTGATTGCCTTAATTGA+TGG | - | chr7.3:85811126-85811145 | None:intergenic | 30.0% |
! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr7.3:85809997-85810016 | None:intergenic | 30.0% |
! | CTCAACTTGTTTGAAATCAT+TGG | + | chr7.3:85807992-85808011 | MS.gene45223:CDS | 30.0% |
! | GTAAACTATGGTTAGTTGTT+TGG | - | chr7.3:85809721-85809740 | None:intergenic | 30.0% |
! | TTGTTTGAAATCATTGGTGA+TGG | + | chr7.3:85807998-85808017 | MS.gene45223:CDS | 30.0% |
! | TTTTTGAATAAGTCAACCTC+CGG | - | chr7.3:85810904-85810923 | None:intergenic | 30.0% |
!! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr7.3:85809986-85810005 | None:intergenic | 30.0% |
!! | TTGTTGTTTGTTGGAAATCA+AGG | + | chr7.3:85810632-85810651 | MS.gene45223:intron | 30.0% |
!!! | GTTTCGTTTCTTTTTTTTGG+TGG | + | chr7.3:85810490-85810509 | MS.gene45223:intron | 30.0% |
!!! | TCCATCTTTTTCAATGTTCT+AGG | + | chr7.3:85811488-85811507 | MS.gene45223:intron | 30.0% |
AAAAAAAATGGGTGACAGCT+AGG | + | chr7.3:85808997-85809016 | MS.gene45223:intron | 35.0% | |
AAAAAAATGGGTGACAGCTA+GGG | + | chr7.3:85808998-85809017 | MS.gene45223:intron | 35.0% | |
AAACGAAACATGTATGCCTT+CGG | - | chr7.3:85810479-85810498 | None:intergenic | 35.0% | |
AAAGGACCCAAAGATGTATT+TGG | + | chr7.3:85810097-85810116 | MS.gene45223:intron | 35.0% | |
AAATAAACACCGCACTAAGA+CGG | + | chr7.3:85808768-85808787 | MS.gene45223:intron | 35.0% | |
AAATGGAAAGGTCATTCTTG+TGG | + | chr7.3:85811581-85811600 | MS.gene45223:CDS | 35.0% | |
AACATGAAACTTAAAGGACC+TGG | - | chr7.3:85809762-85809781 | None:intergenic | 35.0% | |
AACTGCAGGAAACACTAAAT+TGG | - | chr7.3:85807954-85807973 | None:intergenic | 35.0% | |
ACATGAAACTTAAAGGACCT+GGG | - | chr7.3:85809761-85809780 | None:intergenic | 35.0% | |
AGAAACGAAACATGTATGTC+CGG | - | chr7.3:85810530-85810549 | None:intergenic | 35.0% | |
ATCATGTTCATTAATGCTGG+TGG | + | chr7.3:85811669-85811688 | MS.gene45223:CDS | 35.0% | |
ATGCCATAATGCTTAAGGTT+GGG | + | chr7.3:85811353-85811372 | MS.gene45223:intron | 35.0% | |
ATTTGGTCCACTTGTCAAAT+TGG | - | chr7.3:85810282-85810301 | None:intergenic | 35.0% | |
CATTATGCTACCATCATCAT+TGG | - | chr7.3:85808146-85808165 | None:intergenic | 35.0% | |
CTGATCAATGACAATGACTT+TGG | - | chr7.3:85808710-85808729 | None:intergenic | 35.0% | |
GATGTATTCTTGTACTCTTG+TGG | - | chr7.3:85810203-85810222 | None:intergenic | 35.0% | |
GCATAATATATGCAATGTCC+AGG | - | chr7.3:85808415-85808434 | None:intergenic | 35.0% | |
GCCTAGAACATTGAAAAAGA+TGG | - | chr7.3:85811492-85811511 | None:intergenic | 35.0% | |
GGATAGAAGGAAAAACAACT+CGG | + | chr7.3:85808912-85808931 | MS.gene45223:intron | 35.0% | |
GGTAGCATAATGAGTGTTTA+TGG | + | chr7.3:85808154-85808173 | MS.gene45223:CDS | 35.0% | |
GTAAAGGCCAAATACATCTT+TGG | - | chr7.3:85810107-85810126 | None:intergenic | 35.0% | |
GTTTCACGTTTGTTTCAGAT+AGG | - | chr7.3:85810075-85810094 | None:intergenic | 35.0% | |
TAACCCAACCTTAAGCATTA+TGG | - | chr7.3:85811359-85811378 | None:intergenic | 35.0% | |
TACCAACTTAGTTAAGATCG+TGG | + | chr7.3:85808443-85808462 | MS.gene45223:intron | 35.0% | |
TATTCTTGTACTCTTGTGGT+AGG | - | chr7.3:85810199-85810218 | None:intergenic | 35.0% | |
TCTAGGCTGTATGTCATAAT+TGG | + | chr7.3:85811505-85811524 | MS.gene45223:intron | 35.0% | |
TGATGTAGTTCCAAATTGGA+CGG | + | chr7.3:85810324-85810343 | MS.gene45223:intron | 35.0% | |
TTCCACGATCTTAACTAAGT+TGG | - | chr7.3:85808448-85808467 | None:intergenic | 35.0% | |
TTTGGTCCACTTGTCAAATT+GGG | - | chr7.3:85810281-85810300 | None:intergenic | 35.0% | |
! | AACACTCTGATTTGCCAAAT+CGG | + | chr7.3:85808062-85808081 | MS.gene45223:CDS | 35.0% |
! | AGAATGACCTTTCCATTTTG+AGG | - | chr7.3:85811579-85811598 | None:intergenic | 35.0% |
! | CATTCCCATTGTTTGGAATT+CGG | + | chr7.3:85809458-85809477 | MS.gene45223:intron | 35.0% |
! | CATTTTCAATCACTTGAGGA+AGG | - | chr7.3:85811152-85811171 | None:intergenic | 35.0% |
! | CTATGGTTAGTTGTTTGGTT+AGG | - | chr7.3:85809716-85809735 | None:intergenic | 35.0% |
! | GTGTCAAGTTTGTTTCAGAT+AGG | + | chr7.3:85809892-85809911 | MS.gene45223:intron | 35.0% |
!! | CTCTTCTGTCTATTTCTACT+CGG | + | chr7.3:85808119-85808138 | MS.gene45223:CDS | 35.0% |
!!! | ACGTTCCAAGAATTTTGACT+TGG | - | chr7.3:85810372-85810391 | None:intergenic | 35.0% |
AAACGAAACATGTATGTCCG+GGG | - | chr7.3:85810528-85810547 | None:intergenic | 40.0% | |
AACAATATACCTGGAATGGG+TGG | - | chr7.3:85811177-85811196 | None:intergenic | 40.0% | |
AACATACGATCTAGCCGATT+TGG | - | chr7.3:85808079-85808098 | None:intergenic | 40.0% | |
AAGCCACACTCGAAACTTAA+AGG | + | chr7.3:85809959-85809978 | MS.gene45223:intron | 40.0% | |
AATAAACACCGCACTAAGAC+GGG | + | chr7.3:85808769-85808788 | MS.gene45223:intron | 40.0% | |
ACACTCTCAGCTATGGTATT+AGG | + | chr7.3:85807926-85807945 | MS.gene45223:CDS | 40.0% | |
AGAAGAGAGATAGGAAGAAG+GGG | + | chr7.3:85809033-85809052 | MS.gene45223:intron | 40.0% | |
AGAAGGAAAAACAACTCGGA+GGG | + | chr7.3:85808916-85808935 | MS.gene45223:intron | 40.0% | |
AGAGAAGAGAGATAGGAAGA+AGG | + | chr7.3:85809031-85809050 | MS.gene45223:intron | 40.0% | |
AGCTTTGCCTCAAAATGGAA+AGG | + | chr7.3:85811569-85811588 | MS.gene45223:CDS | 40.0% | |
AGGAGATGCCATAATGCTTA+AGG | + | chr7.3:85811348-85811367 | MS.gene45223:CDS | 40.0% | |
ATATGAGAAGTAGGCATGAG+AGG | + | chr7.3:85809574-85809593 | MS.gene45223:intron | 40.0% | |
ATATGAGGGAGTCTCAAGTT+TGG | + | chr7.3:85811047-85811066 | MS.gene45223:CDS | 40.0% | |
ATCTTTGTTGCCGTCCAATT+TGG | - | chr7.3:85810337-85810356 | None:intergenic | 40.0% | |
ATGTAGGAATGACTACGGTT+CGG | + | chr7.3:85808326-85808345 | MS.gene45223:intron | 40.0% | |
ATGTGTCATCCTGCTTTGAT+AGG | + | chr7.3:85808253-85808272 | MS.gene45223:CDS | 40.0% | |
ATTGCAGCATTAAGAACTGC+AGG | - | chr7.3:85807968-85807987 | None:intergenic | 40.0% | |
CACAAAGCTTTGCCTCAAAA+TGG | + | chr7.3:85811564-85811583 | MS.gene45223:CDS | 40.0% | |
CATGAAACTTAAAGGACCTG+GGG | - | chr7.3:85809760-85809779 | None:intergenic | 40.0% | |
CATTTAGGGATTGAGCATGT+TGG | + | chr7.3:85811298-85811317 | MS.gene45223:intron | 40.0% | |
CCAAACAATGGGAATGTGAT+AGG | - | chr7.3:85809454-85809473 | None:intergenic | 40.0% | |
CCTATCACATTCCCATTGTT+TGG | + | chr7.3:85809451-85809470 | MS.gene45223:intron | 40.0% | |
GAAACGAAACATGTATGTCC+GGG | - | chr7.3:85810529-85810548 | None:intergenic | 40.0% | |
GAGAAGAGAGATAGGAAGAA+GGG | + | chr7.3:85809032-85809051 | MS.gene45223:intron | 40.0% | |
GATGCCATAATGCTTAAGGT+TGG | + | chr7.3:85811352-85811371 | MS.gene45223:intron | 40.0% | |
GGCTGTATGTCATAATTGGT+CGG | + | chr7.3:85811509-85811528 | MS.gene45223:intron | 40.0% | |
GTGCGGTGTTTATTTGATTC+AGG | - | chr7.3:85808763-85808782 | None:intergenic | 40.0% | |
TAAGGATGCAGTACTTGATC+CGG | + | chr7.3:85810882-85810901 | MS.gene45223:CDS | 40.0% | |
TAAGTACGAGTACATGGGAA+AGG | + | chr7.3:85810939-85810958 | MS.gene45223:CDS | 40.0% | |
TAGAAGGAAAAACAACTCGG+AGG | + | chr7.3:85808915-85808934 | MS.gene45223:intron | 40.0% | |
TAGTGATACACTCTCAGCTA+TGG | + | chr7.3:85807919-85807938 | MS.gene45223:CDS | 40.0% | |
TCCTTCTTCTTCTTGTCAGA+GGG | - | chr7.3:85808976-85808995 | None:intergenic | 40.0% | |
TCTTGTGGCACATGTACTAT+TGG | + | chr7.3:85811596-85811615 | MS.gene45223:CDS | 40.0% | |
TGTGTCATCCTGCTTTGATA+GGG | + | chr7.3:85808254-85808273 | MS.gene45223:CDS | 40.0% | |
TTCCTTCTTCTTCTTGTCAG+AGG | - | chr7.3:85808977-85808996 | None:intergenic | 40.0% | |
TTGGTCCACTTGTCAAATTG+GGG | - | chr7.3:85810280-85810299 | None:intergenic | 40.0% | |
TTTGAACAAGGTTAGAACCC+TGG | + | chr7.3:85808394-85808413 | MS.gene45223:intron | 40.0% | |
TTTGTTCTCACGTCTTTGTG+CGG | - | chr7.3:85808809-85808828 | None:intergenic | 40.0% | |
! | AAGTTTCGAGTGTGGCTTAA+CGG | - | chr7.3:85809957-85809976 | None:intergenic | 40.0% |
! | GATCAACTTTAGCTTAACGG+AGG | - | chr7.3:85809931-85809950 | None:intergenic | 40.0% |
! | GGTGCATTTTCAATCACTTG+AGG | - | chr7.3:85811156-85811175 | None:intergenic | 40.0% |
! | GTCTCAAGTTTGGTTGATGT+TGG | + | chr7.3:85811057-85811076 | MS.gene45223:CDS | 40.0% |
! | TCAAGTTTGGTTGATGTTGG+AGG | + | chr7.3:85811060-85811079 | MS.gene45223:CDS | 40.0% |
! | TTTGATTTCCCGTCTTAGTG+CGG | - | chr7.3:85808780-85808799 | None:intergenic | 40.0% |
!! | AACTTGTGTCACTTGTGTCA+AGG | + | chr7.3:85809290-85809309 | MS.gene45223:intron | 40.0% |
!! | CTTAACGGAGGTTGATAGAA+AGG | - | chr7.3:85809919-85809938 | None:intergenic | 40.0% |
!! | GTTTCGAGTTTGTTTCGGAT+AGG | + | chr7.3:85809832-85809851 | MS.gene45223:intron | 40.0% |
!! | GTTTCGAGTTTGTTTCGGAT+AGG | - | chr7.3:85809851-85809832 | None:intergenic | 40.0% |
!!! | CGTTTCTTTTTTTTGGTGGC+CGG | + | chr7.3:85810494-85810513 | MS.gene45223:intron | 40.0% |
!!! | GTTTCTTTTTTTTGGTGGCC+GGG | + | chr7.3:85810495-85810514 | MS.gene45223:intron | 40.0% |
!!! | TTTCTTTTTTTTGGTGGCCG+GGG | + | chr7.3:85810496-85810515 | MS.gene45223:intron | 40.0% |
AAGGAAAAACAACTCGGAGG+GGG | + | chr7.3:85808918-85808937 | MS.gene45223:intron | 45.0% | |
AGCATTATGGCATCTCCTTG+TGG | - | chr7.3:85811346-85811365 | None:intergenic | 45.0% | |
ATCCTGCTTTGATAGGGTTG+TGG | + | chr7.3:85808260-85808279 | MS.gene45223:CDS | 45.0% | |
CCTTCTTCTTCTTGTCAGAG+GGG | - | chr7.3:85808975-85808994 | None:intergenic | 45.0% | |
GAAGAGAGATAGGAAGAAGG+GGG | + | chr7.3:85809034-85809053 | MS.gene45223:intron | 45.0% | |
GAAGGAAAAACAACTCGGAG+GGG | + | chr7.3:85808917-85808936 | MS.gene45223:intron | 45.0% | |
GAGAAGGAGAGAAGAGAGAT+AGG | + | chr7.3:85809024-85809043 | MS.gene45223:intron | 45.0% | |
GGCATGAGAGGTTGAAACAA+AGG | + | chr7.3:85809586-85809605 | MS.gene45223:intron | 45.0% | |
GGGTGTGAGATTCAATCACA+TGG | - | chr7.3:85807886-85807905 | None:intergenic | 45.0% | |
GTTGATGTTGGAGGTGGAAA+TGG | + | chr7.3:85811069-85811088 | MS.gene45223:CDS | 45.0% | |
GTTTATGGGATCACACCTTC+TGG | + | chr7.3:85808169-85808188 | MS.gene45223:CDS | 45.0% | |
TACCACAACCCTATCAAAGC+AGG | - | chr7.3:85808265-85808284 | None:intergenic | 45.0% | |
TCCACTTGTCAAATTGGGGT+AGG | - | chr7.3:85810276-85810295 | None:intergenic | 45.0% | |
TCCTACCCCAATTTGACAAG+TGG | + | chr7.3:85810272-85810291 | MS.gene45223:intron | 45.0% | |
TCTACTCGGACCAATGATGA+TGG | + | chr7.3:85808133-85808152 | MS.gene45223:CDS | 45.0% | |
TGTCGTCAACGTTGTAGATC+CGG | - | chr7.3:85808687-85808706 | None:intergenic | 45.0% | |
TTAGGGATTGAGCATGTTGG+AGG | + | chr7.3:85811301-85811320 | MS.gene45223:intron | 45.0% | |
! | AGCGCCGAATTCCAAACAAT+GGG | - | chr7.3:85809465-85809484 | None:intergenic | 45.0% |
! | AGTTTGGTTGATGTTGGAGG+TGG | + | chr7.3:85811063-85811082 | MS.gene45223:CDS | 45.0% |
! | CGAGATGCATTTGTTGCTTC+TGG | - | chr7.3:85811627-85811646 | None:intergenic | 45.0% |
! | GGTCCTTTAAGTTTCGAGTG+TGG | - | chr7.3:85809965-85809984 | None:intergenic | 45.0% |
! | TAGCGCCGAATTCCAAACAA+TGG | - | chr7.3:85809466-85809485 | None:intergenic | 45.0% |
!! | GGCAAATCAGAGTGTTGAGT+TGG | - | chr7.3:85808058-85808077 | None:intergenic | 45.0% |
!!! | GTATTTTTTTTTTTTTAAAT+TGG | + | chr7.3:85810717-85810736 | MS.gene45223:intron | 5.0% |
!!! | TAATTTTCTAATAAATAATT+TGG | - | chr7.3:85810299-85810318 | None:intergenic | 5.0% |
ATCCGGAGACACGAGTATTC+CGG | - | chr7.3:85808670-85808689 | None:intergenic | 50.0% | |
ATCTGACCAAATACCTCCCC+AGG | + | chr7.3:85809741-85809760 | MS.gene45223:intron | 50.0% | |
CCCCTCTGACAAGAAGAAGA+AGG | + | chr7.3:85808972-85808991 | MS.gene45223:intron | 50.0% | |
GAAAATGCACCACCCATTCC+AGG | + | chr7.3:85811165-85811184 | MS.gene45223:CDS | 50.0% | |
GAAACTTAAAGGACCTGGGG+AGG | - | chr7.3:85809757-85809776 | None:intergenic | 50.0% | |
GTGACAGCTAGGGTTTGAGA+AGG | + | chr7.3:85809008-85809027 | MS.gene45223:intron | 50.0% | |
! | AACTCGGAGGGGGTGATTTT+TGG | + | chr7.3:85808928-85808947 | MS.gene45223:intron | 50.0% |
! | ACTCGGAGGGGGTGATTTTT+GGG | + | chr7.3:85808929-85808948 | MS.gene45223:intron | 50.0% |
! | GAGAGTTTGGCTCAACGTTC+TGG | + | chr7.3:85811717-85811736 | MS.gene45223:CDS | 50.0% |
!! | AAAGGACCTGGGGAGGTATT+TGG | - | chr7.3:85809750-85809769 | None:intergenic | 50.0% |
CTCCGGAATACTCGTGTCTC+CGG | + | chr7.3:85808665-85808684 | MS.gene45223:intron | 55.0% | |
GGATGCAGTACTTGATCCGG+AGG | + | chr7.3:85810885-85810904 | MS.gene45223:CDS | 55.0% | |
TATGTCCGGGGTTCAAACCC+CGG | - | chr7.3:85810516-85810535 | None:intergenic | 55.0% | |
GGTGGCCGGGGTTTGAACCC+CGG | + | chr7.3:85810508-85810527 | MS.gene45223:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 85807857 | 85811806 | 85807857 | ID=MS.gene45223 |
chr7.3 | mRNA | 85807857 | 85811806 | 85807857 | ID=MS.gene45223.t1;Parent=MS.gene45223 |
chr7.3 | exon | 85807857 | 85808281 | 85807857 | ID=MS.gene45223.t1.exon1;Parent=MS.gene45223.t1 |
chr7.3 | CDS | 85807857 | 85808281 | 85807857 | ID=cds.MS.gene45223.t1;Parent=MS.gene45223.t1 |
chr7.3 | exon | 85810873 | 85811186 | 85810873 | ID=MS.gene45223.t1.exon2;Parent=MS.gene45223.t1 |
chr7.3 | CDS | 85810873 | 85811186 | 85810873 | ID=cds.MS.gene45223.t1;Parent=MS.gene45223.t1 |
chr7.3 | exon | 85811305 | 85811369 | 85811305 | ID=MS.gene45223.t1.exon3;Parent=MS.gene45223.t1 |
chr7.3 | CDS | 85811305 | 85811369 | 85811305 | ID=cds.MS.gene45223.t1;Parent=MS.gene45223.t1 |
chr7.3 | exon | 85811510 | 85811806 | 85811510 | ID=MS.gene45223.t1.exon4;Parent=MS.gene45223.t1 |
chr7.3 | CDS | 85811510 | 85811806 | 85811510 | ID=cds.MS.gene45223.t1;Parent=MS.gene45223.t1 |
Gene Sequence |
Protein sequence |