Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051844.t1 | XP_013458458.1 | 99.6 | 273 | 1 | 0 | 1 | 273 | 58 | 330 | 9.60E-151 | 542.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051844.t1 | Q42517 | 68.0 | 272 | 83 | 3 | 1 | 272 | 60 | 327 | 3.0e-100 | 366.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051844.t1 | A0A072V2Y0 | 99.6 | 273 | 1 | 0 | 1 | 273 | 3 | 275 | 6.9e-151 | 542.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene051844 | 0.823057 | 1.70E-53 | -1.69E-46 |
| MS.gene051844 | MS.gene052211 | 0.829282 | 5.62E-55 | -1.69E-46 |
| MS.gene051844 | MS.gene05244 | 0.803768 | 2.98E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene052706 | 0.806536 | 7.84E-50 | -1.69E-46 |
| MS.gene051844 | MS.gene053406 | 0.814724 | 1.33E-51 | -1.69E-46 |
| MS.gene051844 | MS.gene054146 | 0.801513 | 8.69E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene055240 | 0.830443 | 2.93E-55 | -1.69E-46 |
| MS.gene051844 | MS.gene056748 | 0.810423 | 1.16E-50 | -1.69E-46 |
| MS.gene051844 | MS.gene059955 | 0.816939 | 4.27E-52 | -1.69E-46 |
| MS.gene051844 | MS.gene066602 | 0.826598 | 2.48E-54 | -1.69E-46 |
| MS.gene051844 | MS.gene068633 | 0.817349 | 3.45E-52 | -1.69E-46 |
| MS.gene051844 | MS.gene069166 | 0.822806 | 1.94E-53 | -1.69E-46 |
| MS.gene051844 | MS.gene072418 | 0.801697 | 7.97E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene073526 | 0.810666 | 1.03E-50 | -1.69E-46 |
| MS.gene051844 | MS.gene07488 | 0.802114 | 6.54E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene07839 | 0.804508 | 2.09E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene07840 | 0.807846 | 4.14E-50 | -1.69E-46 |
| MS.gene051844 | MS.gene09920 | 0.803733 | 3.03E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene20639 | 0.80901 | 2.34E-50 | -1.69E-46 |
| MS.gene051844 | MS.gene24862 | 0.906125 | 2.07E-80 | -1.69E-46 |
| MS.gene051844 | MS.gene28548 | 0.819174 | 1.33E-52 | -1.69E-46 |
| MS.gene051844 | MS.gene29687 | 0.807409 | 5.13E-50 | -1.69E-46 |
| MS.gene051844 | MS.gene35597 | 0.818403 | 2.00E-52 | -1.69E-46 |
| MS.gene051844 | MS.gene38435 | 0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene051844 | MS.gene44712 | 0.814015 | 1.91E-51 | -1.69E-46 |
| MS.gene051844 | MS.gene45223 | 0.803045 | 4.20E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene50279 | 0.800102 | 1.69E-48 | -1.69E-46 |
| MS.gene051844 | MS.gene51735 | 0.803902 | 2.79E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene52370 | 0.81232 | 4.50E-51 | -1.69E-46 |
| MS.gene051844 | MS.gene54029 | 0.816903 | 4.35E-52 | -1.69E-46 |
| MS.gene051844 | MS.gene54667 | 0.811526 | 6.70E-51 | -1.69E-46 |
| MS.gene051844 | MS.gene56381 | 0.801444 | 8.98E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene57085 | 0.81426 | 1.69E-51 | -1.69E-46 |
| MS.gene051844 | MS.gene61143 | 0.804704 | 1.90E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene63914 | 0.802623 | 5.14E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene65500 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene75471 | 0.831021 | 2.11E-55 | -1.69E-46 |
| MS.gene051844 | MS.gene75472 | 0.847842 | 8.95E-60 | -1.69E-46 |
| MS.gene051844 | MS.gene79221 | 0.809183 | 2.15E-50 | -1.69E-46 |
| MS.gene051844 | MS.gene80744 | 0.829867 | 4.05E-55 | -1.69E-46 |
| MS.gene051844 | MS.gene81349 | 0.801744 | 7.79E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene86563 | 0.803681 | 3.10E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene87346 | 0.812731 | 3.66E-51 | -1.69E-46 |
| MS.gene051844 | MS.gene87750 | 0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene051844 | MS.gene97125 | 0.801063 | 1.07E-48 | -1.69E-46 |
| MS.gene051844 | MS.gene97602 | 0.815355 | 9.65E-52 | -1.69E-46 |
| MS.gene051844 | MS.gene98322 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene051844 | MS.gene99062 | 0.805813 | 1.11E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051844 | MS.gene002195 | PPI |
| MS.gene055984 | MS.gene051844 | PPI |
| MS.gene01164 | MS.gene051844 | PPI |
| MS.gene051844 | MS.gene041124 | PPI |
| MS.gene051844 | MS.gene010392 | PPI |
| MS.gene051844 | MS.gene047065 | PPI |
| MS.gene036786 | MS.gene051844 | PPI |
| MS.gene051844 | MS.gene010390 | PPI |
| MS.gene051844 | MS.gene54705 | PPI |
| MS.gene40613 | MS.gene051844 | PPI |
| MS.gene051844 | MS.gene002194 | PPI |
| MS.gene051844 | MS.gene071927 | PPI |
| MS.gene051844 | MS.gene041122 | PPI |
| MS.gene051844 | MS.gene047665 | PPI |
| MS.gene051844 | MS.gene57129 | PPI |
| MS.gene37256 | MS.gene051844 | PPI |
| MS.gene051844 | MS.gene034512 | PPI |
| MS.gene52672 | MS.gene051844 | PPI |
| MS.gene051844 | MS.gene04636 | PPI |
| MS.gene051844 | MS.gene018002 | PPI |
| MS.gene051844 | MS.gene71395 | PPI |
| MS.gene051844 | MS.gene62417 | PPI |
| MS.gene051844 | MS.gene047667 | PPI |
| MS.gene051844 | MS.gene61508 | PPI |
| MS.gene051844 | MS.gene71393 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051844.t1 | MTR_4g125940 | 99.634 | 273 | 1 | 0 | 1 | 273 | 58 | 330 | 0.0 | 550 |
| MS.gene051844.t1 | MTR_4g125940 | 99.634 | 273 | 1 | 0 | 1 | 273 | 3 | 275 | 0.0 | 548 |
| MS.gene051844.t1 | MTR_2g040000 | 73.723 | 274 | 71 | 1 | 1 | 273 | 59 | 332 | 8.06e-147 | 414 |
| MS.gene051844.t1 | MTR_1g054205 | 58.182 | 275 | 110 | 2 | 1 | 272 | 54 | 326 | 1.98e-111 | 325 |
| MS.gene051844.t1 | MTR_7g093370 | 58.608 | 273 | 108 | 2 | 3 | 272 | 101 | 371 | 6.77e-108 | 317 |
| MS.gene051844.t1 | MTR_2g029560 | 54.182 | 275 | 122 | 2 | 1 | 273 | 54 | 326 | 4.37e-100 | 296 |
| MS.gene051844.t1 | MTR_2g029730 | 55.474 | 274 | 118 | 2 | 1 | 272 | 55 | 326 | 1.01e-99 | 295 |
| MS.gene051844.t1 | MTR_2g029800 | 54.545 | 275 | 121 | 2 | 1 | 273 | 59 | 331 | 2.36e-98 | 292 |
| MS.gene051844.t1 | MTR_2g029815 | 54.909 | 275 | 120 | 2 | 1 | 273 | 59 | 331 | 4.16e-98 | 291 |
| MS.gene051844.t1 | MTR_2g028980 | 55.109 | 274 | 119 | 2 | 1 | 272 | 59 | 330 | 1.17e-97 | 290 |
| MS.gene051844.t1 | MTR_2g029830 | 54.545 | 275 | 121 | 2 | 1 | 273 | 58 | 330 | 1.47e-97 | 290 |
| MS.gene051844.t1 | MTR_5g021060 | 53.285 | 274 | 123 | 2 | 1 | 272 | 60 | 330 | 1.95e-95 | 284 |
| MS.gene051844.t1 | MTR_5g017860 | 53.091 | 275 | 121 | 4 | 1 | 272 | 57 | 326 | 1.09e-94 | 282 |
| MS.gene051844.t1 | MTR_2g029850 | 54.779 | 272 | 119 | 2 | 3 | 272 | 61 | 330 | 1.94e-94 | 282 |
| MS.gene051844.t1 | MTR_3g094650 | 54.710 | 276 | 110 | 5 | 1 | 272 | 58 | 322 | 2.06e-94 | 281 |
| MS.gene051844.t1 | MTR_5g017850 | 53.091 | 275 | 121 | 4 | 1 | 272 | 57 | 326 | 2.55e-94 | 281 |
| MS.gene051844.t1 | MTR_2g029740 | 52.920 | 274 | 125 | 2 | 1 | 272 | 59 | 330 | 3.47e-94 | 281 |
| MS.gene051844.t1 | MTR_8g076820 | 52.364 | 275 | 126 | 2 | 1 | 273 | 60 | 331 | 1.43e-93 | 279 |
| MS.gene051844.t1 | MTR_2g029820 | 52.727 | 275 | 126 | 2 | 1 | 273 | 59 | 331 | 1.85e-93 | 280 |
| MS.gene051844.t1 | MTR_4g122640 | 52.190 | 274 | 124 | 3 | 1 | 272 | 68 | 336 | 7.31e-93 | 278 |
| MS.gene051844.t1 | MTR_2g029750 | 52.190 | 274 | 127 | 2 | 1 | 272 | 59 | 330 | 2.42e-92 | 277 |
| MS.gene051844.t1 | MTR_2g029860 | 53.650 | 274 | 123 | 2 | 1 | 272 | 59 | 330 | 6.59e-92 | 276 |
| MS.gene051844.t1 | MTR_5g074970 | 51.799 | 278 | 117 | 5 | 1 | 272 | 60 | 326 | 1.26e-89 | 269 |
| MS.gene051844.t1 | MTR_5g083860 | 52.174 | 276 | 117 | 5 | 1 | 272 | 61 | 325 | 1.87e-89 | 268 |
| MS.gene051844.t1 | MTR_2g084110 | 50.730 | 274 | 122 | 3 | 1 | 272 | 55 | 317 | 2.04e-89 | 268 |
| MS.gene051844.t1 | MTR_3g466200 | 51.986 | 277 | 117 | 6 | 1 | 272 | 55 | 320 | 2.05e-89 | 268 |
| MS.gene051844.t1 | MTR_2g029910 | 51.825 | 274 | 127 | 3 | 3 | 273 | 62 | 333 | 4.53e-89 | 268 |
| MS.gene051844.t1 | MTR_5g014100 | 50.542 | 277 | 131 | 3 | 1 | 272 | 56 | 331 | 5.45e-89 | 268 |
| MS.gene051844.t1 | MTR_2g084080 | 50.000 | 274 | 124 | 3 | 1 | 272 | 55 | 317 | 8.94e-89 | 266 |
| MS.gene051844.t1 | MTR_4g029170 | 52.899 | 276 | 115 | 5 | 1 | 272 | 57 | 321 | 1.04e-88 | 266 |
| MS.gene051844.t1 | MTR_2g029830 | 52.896 | 259 | 118 | 2 | 17 | 273 | 6 | 262 | 1.82e-87 | 262 |
| MS.gene051844.t1 | MTR_7g072510 | 49.635 | 274 | 125 | 3 | 1 | 272 | 50 | 312 | 1.98e-87 | 263 |
| MS.gene051844.t1 | MTR_4g083710 | 50.181 | 277 | 124 | 4 | 1 | 272 | 57 | 324 | 2.06e-87 | 263 |
| MS.gene051844.t1 | MTR_2g084010 | 50.725 | 276 | 120 | 4 | 1 | 272 | 55 | 318 | 3.00e-87 | 263 |
| MS.gene051844.t1 | MTR_3g072190 | 51.460 | 274 | 120 | 3 | 1 | 272 | 56 | 318 | 4.59e-87 | 262 |
| MS.gene051844.t1 | MTR_5g074760 | 52.518 | 278 | 117 | 6 | 1 | 273 | 55 | 322 | 9.98e-87 | 261 |
| MS.gene051844.t1 | MTR_4g029200 | 49.458 | 277 | 121 | 4 | 1 | 272 | 76 | 338 | 1.59e-86 | 261 |
| MS.gene051844.t1 | MTR_4g029180 | 52.174 | 276 | 117 | 5 | 1 | 272 | 57 | 321 | 2.31e-86 | 260 |
| MS.gene051844.t1 | MTR_3g094670 | 53.986 | 276 | 112 | 5 | 1 | 272 | 58 | 322 | 5.63e-86 | 259 |
| MS.gene051844.t1 | MTR_7g072480 | 50.000 | 274 | 124 | 4 | 1 | 272 | 54 | 316 | 2.23e-85 | 258 |
| MS.gene051844.t1 | MTR_2g084020 | 49.635 | 274 | 126 | 3 | 1 | 272 | 55 | 318 | 4.01e-85 | 257 |
| MS.gene051844.t1 | MTR_2g008710 | 49.638 | 276 | 128 | 5 | 1 | 272 | 57 | 325 | 9.07e-85 | 256 |
| MS.gene051844.t1 | MTR_5g074740 | 51.799 | 278 | 119 | 6 | 1 | 273 | 55 | 322 | 9.71e-85 | 256 |
| MS.gene051844.t1 | MTR_2g084090 | 49.091 | 275 | 126 | 4 | 1 | 272 | 55 | 318 | 3.57e-84 | 255 |
| MS.gene051844.t1 | MTR_5g074710 | 51.439 | 278 | 120 | 6 | 1 | 273 | 55 | 322 | 4.45e-84 | 254 |
| MS.gene051844.t1 | MTR_4g029190 | 48.029 | 279 | 124 | 5 | 1 | 272 | 76 | 340 | 9.11e-84 | 254 |
| MS.gene051844.t1 | MTR_5g074860 | 50.362 | 276 | 122 | 6 | 1 | 271 | 59 | 324 | 2.63e-83 | 253 |
| MS.gene051844.t1 | MTR_2g084000 | 47.445 | 274 | 132 | 3 | 1 | 272 | 56 | 319 | 3.34e-83 | 252 |
| MS.gene051844.t1 | MTR_3g094630 | 53.261 | 276 | 114 | 5 | 1 | 272 | 58 | 322 | 4.09e-83 | 252 |
| MS.gene051844.t1 | MTR_4g074995 | 49.458 | 277 | 113 | 5 | 1 | 272 | 54 | 308 | 5.24e-83 | 251 |
| MS.gene051844.t1 | MTR_4g114210 | 48.736 | 277 | 130 | 5 | 1 | 272 | 51 | 320 | 6.76e-83 | 251 |
| MS.gene051844.t1 | MTR_1g022970 | 48.905 | 274 | 136 | 2 | 1 | 272 | 76 | 347 | 1.10e-82 | 252 |
| MS.gene051844.t1 | MTR_5g049280 | 47.101 | 276 | 141 | 4 | 2 | 273 | 64 | 338 | 4.14e-81 | 248 |
| MS.gene051844.t1 | MTR_4g030890 | 46.324 | 272 | 137 | 4 | 3 | 272 | 132 | 396 | 1.65e-80 | 249 |
| MS.gene051844.t1 | MTR_3g466180 | 50.000 | 274 | 124 | 3 | 1 | 272 | 61 | 323 | 2.83e-80 | 245 |
| MS.gene051844.t1 | MTR_2g088770 | 46.545 | 275 | 139 | 5 | 1 | 272 | 56 | 325 | 8.14e-80 | 244 |
| MS.gene051844.t1 | MTR_7g107520 | 47.080 | 274 | 135 | 5 | 1 | 272 | 55 | 320 | 7.15e-79 | 241 |
| MS.gene051844.t1 | MTR_4g031140 | 43.956 | 273 | 144 | 4 | 3 | 273 | 60 | 325 | 3.37e-78 | 240 |
| MS.gene051844.t1 | MTR_3g467600 | 49.819 | 277 | 125 | 5 | 1 | 272 | 57 | 324 | 1.03e-77 | 238 |
| MS.gene051844.t1 | MTR_4g074990 | 46.209 | 277 | 119 | 4 | 1 | 272 | 54 | 305 | 1.66e-76 | 235 |
| MS.gene051844.t1 | MTR_1g115900 | 44.404 | 277 | 139 | 5 | 1 | 273 | 57 | 322 | 1.71e-76 | 236 |
| MS.gene051844.t1 | MTR_4g046713 | 44.364 | 275 | 145 | 4 | 1 | 272 | 57 | 326 | 2.15e-76 | 235 |
| MS.gene051844.t1 | MTR_8g075100 | 47.273 | 275 | 127 | 8 | 3 | 272 | 58 | 319 | 7.20e-76 | 234 |
| MS.gene051844.t1 | MTR_3g072190 | 48.276 | 261 | 122 | 3 | 14 | 272 | 2 | 251 | 4.54e-75 | 229 |
| MS.gene051844.t1 | MTR_7g026990 | 45.455 | 275 | 136 | 5 | 1 | 273 | 61 | 323 | 1.79e-74 | 230 |
| MS.gene051844.t1 | MTR_1g101830 | 45.255 | 274 | 136 | 7 | 3 | 272 | 59 | 322 | 1.13e-73 | 228 |
| MS.gene051844.t1 | MTR_5g022870 | 45.421 | 273 | 135 | 7 | 3 | 272 | 55 | 316 | 1.64e-72 | 225 |
| MS.gene051844.t1 | MTR_2g008730 | 49.187 | 246 | 115 | 4 | 31 | 272 | 62 | 301 | 3.95e-72 | 223 |
| MS.gene051844.t1 | MTR_1g025980 | 46.154 | 273 | 134 | 7 | 3 | 272 | 56 | 318 | 4.53e-71 | 221 |
| MS.gene051844.t1 | MTR_4g074980 | 45.255 | 274 | 114 | 5 | 1 | 272 | 55 | 294 | 6.67e-71 | 220 |
| MS.gene051844.t1 | MTR_7g029030 | 45.421 | 273 | 139 | 4 | 2 | 272 | 56 | 320 | 1.98e-70 | 220 |
| MS.gene051844.t1 | MTR_7g086820 | 43.223 | 273 | 142 | 7 | 3 | 273 | 52 | 313 | 7.91e-69 | 216 |
| MS.gene051844.t1 | MTR_3g092990 | 42.391 | 276 | 152 | 3 | 1 | 273 | 56 | 327 | 8.12e-69 | 216 |
| MS.gene051844.t1 | MTR_0155s0040 | 43.636 | 275 | 136 | 9 | 1 | 272 | 57 | 315 | 1.09e-68 | 215 |
| MS.gene051844.t1 | MTR_2g008160 | 43.478 | 276 | 144 | 5 | 2 | 272 | 55 | 323 | 1.98e-68 | 215 |
| MS.gene051844.t1 | MTR_1g090760 | 43.796 | 274 | 145 | 4 | 5 | 273 | 62 | 331 | 1.42e-67 | 213 |
| MS.gene051844.t1 | MTR_7g086870 | 41.818 | 275 | 144 | 6 | 1 | 273 | 52 | 312 | 3.34e-67 | 211 |
| MS.gene051844.t1 | MTR_2g099175 | 41.304 | 276 | 150 | 5 | 3 | 273 | 68 | 336 | 4.82e-66 | 209 |
| MS.gene051844.t1 | MTR_4g133800 | 42.125 | 273 | 147 | 6 | 1 | 272 | 71 | 333 | 1.77e-65 | 207 |
| MS.gene051844.t1 | MTR_2g437770 | 43.066 | 274 | 144 | 5 | 1 | 273 | 80 | 342 | 2.39e-65 | 207 |
| MS.gene051844.t1 | MTR_1g038680 | 41.727 | 278 | 152 | 6 | 1 | 272 | 59 | 332 | 6.47e-65 | 206 |
| MS.gene051844.t1 | MTR_6g043280 | 43.015 | 272 | 139 | 7 | 5 | 273 | 75 | 333 | 1.17e-64 | 205 |
| MS.gene051844.t1 | MTR_1g009750 | 43.542 | 271 | 145 | 3 | 6 | 272 | 62 | 328 | 3.78e-64 | 204 |
| MS.gene051844.t1 | MTR_1g086320 | 41.367 | 278 | 153 | 5 | 1 | 272 | 60 | 333 | 4.59e-64 | 204 |
| MS.gene051844.t1 | MTR_1g077000 | 42.701 | 274 | 140 | 7 | 1 | 272 | 69 | 327 | 5.08e-64 | 204 |
| MS.gene051844.t1 | MTR_2g067440 | 39.344 | 305 | 148 | 8 | 1 | 273 | 90 | 389 | 5.27e-64 | 205 |
| MS.gene051844.t1 | MTR_2g077990 | 39.935 | 308 | 145 | 8 | 1 | 273 | 106 | 408 | 1.02e-63 | 205 |
| MS.gene051844.t1 | MTR_6g027440 | 41.241 | 274 | 149 | 6 | 1 | 272 | 51 | 314 | 2.16e-63 | 202 |
| MS.gene051844.t1 | MTR_6g043240 | 44.074 | 270 | 135 | 6 | 5 | 272 | 76 | 331 | 2.60e-63 | 202 |
| MS.gene051844.t1 | MTR_5g074860 | 44.565 | 276 | 99 | 8 | 1 | 271 | 59 | 285 | 6.01e-63 | 199 |
| MS.gene051844.t1 | MTR_2g078610 | 38.436 | 307 | 151 | 7 | 1 | 273 | 106 | 408 | 8.70e-63 | 203 |
| MS.gene051844.t1 | MTR_4g074980 | 49.756 | 205 | 92 | 3 | 1 | 200 | 55 | 253 | 2.04e-62 | 197 |
| MS.gene051844.t1 | MTR_5g016010 | 41.328 | 271 | 150 | 4 | 6 | 271 | 62 | 328 | 1.35e-61 | 197 |
| MS.gene051844.t1 | MTR_4g087965 | 42.545 | 275 | 145 | 7 | 2 | 268 | 73 | 342 | 2.15e-60 | 195 |
| MS.gene051844.t1 | MTR_1g086490 | 40.283 | 283 | 152 | 5 | 3 | 272 | 62 | 340 | 2.75e-60 | 194 |
| MS.gene051844.t1 | MTR_4g095450 | 41.912 | 272 | 142 | 6 | 6 | 271 | 62 | 323 | 2.83e-60 | 194 |
| MS.gene051844.t1 | MTR_4g127670 | 42.222 | 270 | 148 | 4 | 2 | 268 | 55 | 319 | 1.71e-59 | 192 |
| MS.gene051844.t1 | MTR_2g078280 | 40.484 | 289 | 133 | 7 | 1 | 255 | 106 | 389 | 2.31e-59 | 194 |
| MS.gene051844.t1 | MTR_3g092990 | 42.146 | 261 | 142 | 4 | 17 | 273 | 61 | 316 | 7.41e-59 | 190 |
| MS.gene051844.t1 | MTR_5g033470 | 37.770 | 278 | 160 | 6 | 3 | 272 | 105 | 377 | 2.16e-56 | 185 |
| MS.gene051844.t1 | MTR_8g062780 | 40.590 | 271 | 153 | 4 | 6 | 272 | 58 | 324 | 3.56e-56 | 183 |
| MS.gene051844.t1 | MTR_3g105790 | 40.511 | 274 | 147 | 6 | 5 | 272 | 59 | 322 | 3.39e-55 | 181 |
| MS.gene051844.t1 | MTR_0147s0010 | 37.544 | 285 | 142 | 4 | 4 | 268 | 110 | 378 | 6.95e-54 | 179 |
| MS.gene051844.t1 | MTR_2g008160 | 38.043 | 276 | 124 | 5 | 2 | 272 | 55 | 288 | 7.26e-54 | 176 |
| MS.gene051844.t1 | MTR_2g067450 | 39.493 | 276 | 153 | 8 | 5 | 273 | 44 | 312 | 2.17e-53 | 176 |
| MS.gene051844.t1 | MTR_6g043460 | 40.672 | 268 | 142 | 7 | 5 | 268 | 70 | 324 | 6.09e-53 | 176 |
| MS.gene051844.t1 | MTR_1g009750 | 40.149 | 269 | 140 | 4 | 6 | 272 | 62 | 311 | 8.63e-53 | 174 |
| MS.gene051844.t1 | MTR_0286s0010 | 39.928 | 278 | 152 | 9 | 2 | 272 | 65 | 334 | 3.95e-51 | 171 |
| MS.gene051844.t1 | MTR_6g008075 | 39.928 | 278 | 152 | 9 | 2 | 272 | 65 | 334 | 3.95e-51 | 171 |
| MS.gene051844.t1 | MTR_1g066710 | 35.740 | 277 | 163 | 6 | 2 | 273 | 58 | 324 | 8.88e-51 | 169 |
| MS.gene051844.t1 | MTR_5g074700 | 42.259 | 239 | 111 | 6 | 38 | 273 | 1 | 215 | 9.98e-51 | 166 |
| MS.gene051844.t1 | MTR_4g132490 | 35.531 | 273 | 167 | 4 | 3 | 272 | 61 | 327 | 4.69e-49 | 165 |
| MS.gene051844.t1 | MTR_4g132110 | 34.672 | 274 | 166 | 5 | 4 | 273 | 65 | 329 | 4.40e-48 | 162 |
| MS.gene051844.t1 | MTR_1g066680 | 35.273 | 275 | 163 | 6 | 4 | 273 | 59 | 323 | 8.89e-47 | 159 |
| MS.gene051844.t1 | MTR_1g066640 | 35.870 | 276 | 160 | 7 | 4 | 273 | 60 | 324 | 1.22e-46 | 159 |
| MS.gene051844.t1 | MTR_2g029880 | 44.041 | 193 | 96 | 3 | 81 | 273 | 9 | 189 | 3.50e-46 | 154 |
| MS.gene051844.t1 | MTR_4g132110 | 34.050 | 279 | 166 | 6 | 4 | 273 | 65 | 334 | 3.88e-46 | 158 |
| MS.gene051844.t1 | MTR_1g066380 | 35.507 | 276 | 161 | 7 | 4 | 273 | 60 | 324 | 1.66e-45 | 155 |
| MS.gene051844.t1 | MTR_3g105790 | 39.286 | 252 | 138 | 6 | 27 | 272 | 4 | 246 | 1.41e-44 | 151 |
| MS.gene051844.t1 | MTR_7g072490 | 40.239 | 251 | 83 | 7 | 17 | 265 | 2 | 187 | 2.36e-42 | 144 |
| MS.gene051844.t1 | MTR_3g072210 | 42.233 | 206 | 106 | 4 | 68 | 272 | 45 | 238 | 2.58e-42 | 145 |
| MS.gene051844.t1 | MTR_1g066380 | 34.340 | 265 | 157 | 7 | 15 | 273 | 3 | 256 | 1.07e-40 | 141 |
| MS.gene051844.t1 | MTR_2g008160 | 49.635 | 137 | 67 | 2 | 2 | 138 | 55 | 189 | 2.40e-40 | 139 |
| MS.gene051844.t1 | MTR_2g077980 | 31.915 | 282 | 149 | 9 | 30 | 273 | 10 | 286 | 1.62e-33 | 123 |
| MS.gene051844.t1 | MTR_3g072260 | 70.886 | 79 | 21 | 1 | 1 | 77 | 56 | 134 | 1.97e-30 | 111 |
| MS.gene051844.t1 | MTR_2g078560 | 30.973 | 226 | 121 | 4 | 74 | 268 | 95 | 316 | 8.90e-29 | 112 |
| MS.gene051844.t1 | MTR_7g086790 | 34.921 | 189 | 99 | 5 | 18 | 204 | 17 | 183 | 1.10e-24 | 98.2 |
| MS.gene051844.t1 | MTR_3g462850 | 37.415 | 147 | 89 | 3 | 129 | 273 | 5 | 150 | 5.62e-24 | 94.7 |
| MS.gene051844.t1 | MTR_6g048160 | 60.870 | 69 | 25 | 2 | 10 | 78 | 22 | 88 | 8.24e-22 | 87.4 |
| MS.gene051844.t1 | MTR_4g114220 | 47.525 | 101 | 39 | 3 | 5 | 105 | 37 | 123 | 2.14e-21 | 87.8 |
| MS.gene051844.t1 | MTR_5g058120 | 33.537 | 164 | 94 | 3 | 105 | 268 | 7 | 155 | 4.93e-19 | 84.3 |
| MS.gene051844.t1 | MTR_4g031040 | 30.814 | 172 | 75 | 3 | 31 | 202 | 4 | 131 | 3.44e-18 | 79.3 |
| MS.gene051844.t1 | MTR_1g098320 | 43.373 | 83 | 43 | 1 | 191 | 273 | 47 | 125 | 1.16e-14 | 69.7 |
| MS.gene051844.t1 | MTR_7g107500 | 44.444 | 90 | 45 | 2 | 183 | 272 | 13 | 97 | 1.19e-14 | 68.6 |
| MS.gene051844.t1 | MTR_1g089005 | 45.455 | 88 | 39 | 3 | 1 | 80 | 45 | 131 | 2.35e-14 | 69.3 |
| MS.gene051844.t1 | MTR_5g074770 | 45.161 | 93 | 47 | 3 | 179 | 271 | 20 | 108 | 5.19e-14 | 67.0 |
| MS.gene051844.t1 | MTR_3g107060 | 27.473 | 273 | 112 | 10 | 2 | 253 | 105 | 312 | 7.96e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051844.t1 | AT5G19890 | 66.176 | 272 | 88 | 3 | 1 | 272 | 60 | 327 | 8.09e-130 | 371 |
| MS.gene051844.t1 | AT5G06730 | 59.489 | 274 | 107 | 2 | 1 | 272 | 63 | 334 | 3.90e-111 | 325 |
| MS.gene051844.t1 | AT5G06720 | 58.394 | 274 | 110 | 2 | 1 | 272 | 62 | 333 | 1.05e-109 | 320 |
| MS.gene051844.t1 | AT2G38390 | 54.545 | 275 | 120 | 3 | 1 | 272 | 61 | 333 | 1.56e-102 | 303 |
| MS.gene051844.t1 | AT4G36430 | 55.273 | 275 | 118 | 2 | 1 | 273 | 60 | 331 | 6.93e-102 | 300 |
| MS.gene051844.t1 | AT2G18150 | 54.745 | 274 | 119 | 2 | 1 | 272 | 66 | 336 | 7.69e-101 | 298 |
| MS.gene051844.t1 | AT2G18140 | 54.380 | 274 | 120 | 2 | 1 | 272 | 65 | 335 | 1.37e-100 | 297 |
| MS.gene051844.t1 | AT2G38380 | 54.545 | 275 | 120 | 3 | 1 | 272 | 61 | 333 | 2.32e-100 | 297 |
| MS.gene051844.t1 | AT5G66390 | 53.285 | 274 | 123 | 2 | 1 | 272 | 63 | 333 | 1.98e-97 | 289 |
| MS.gene051844.t1 | AT1G49570 | 53.846 | 273 | 117 | 4 | 1 | 268 | 78 | 346 | 2.03e-94 | 282 |
| MS.gene051844.t1 | AT4G08770 | 52.174 | 276 | 128 | 3 | 1 | 273 | 54 | 328 | 7.46e-94 | 280 |
| MS.gene051844.t1 | AT3G32980 | 51.812 | 276 | 129 | 3 | 1 | 273 | 61 | 335 | 3.75e-93 | 279 |
| MS.gene051844.t1 | AT3G49120 | 52.536 | 276 | 127 | 3 | 1 | 273 | 62 | 336 | 6.24e-93 | 278 |
| MS.gene051844.t1 | AT3G50990 | 50.362 | 276 | 128 | 4 | 1 | 272 | 71 | 341 | 2.31e-91 | 274 |
| MS.gene051844.t1 | AT3G49110 | 51.812 | 276 | 129 | 3 | 1 | 273 | 63 | 337 | 2.51e-91 | 274 |
| MS.gene051844.t1 | AT4G08780 | 50.725 | 276 | 132 | 3 | 1 | 273 | 54 | 328 | 5.62e-91 | 273 |
| MS.gene051844.t1 | AT5G19880 | 51.986 | 277 | 126 | 3 | 1 | 272 | 55 | 329 | 1.61e-90 | 271 |
| MS.gene051844.t1 | AT5G05340 | 51.282 | 273 | 116 | 5 | 1 | 268 | 60 | 320 | 7.37e-90 | 270 |
| MS.gene051844.t1 | AT5G58390 | 52.708 | 277 | 115 | 6 | 1 | 272 | 51 | 316 | 1.61e-89 | 268 |
| MS.gene051844.t1 | AT1G44970 | 52.920 | 274 | 125 | 2 | 1 | 272 | 75 | 346 | 2.22e-88 | 266 |
| MS.gene051844.t1 | AT2G35380 | 49.097 | 277 | 135 | 4 | 1 | 272 | 60 | 335 | 4.40e-86 | 260 |
| MS.gene051844.t1 | AT4G16270 | 50.542 | 277 | 124 | 6 | 1 | 272 | 80 | 348 | 4.55e-86 | 261 |
| MS.gene051844.t1 | AT1G14550 | 47.636 | 275 | 132 | 4 | 1 | 272 | 56 | 321 | 8.57e-85 | 256 |
| MS.gene051844.t1 | AT5G58400 | 50.542 | 277 | 121 | 6 | 1 | 272 | 60 | 325 | 4.54e-84 | 255 |
| MS.gene051844.t1 | AT5G64120 | 48.162 | 272 | 133 | 6 | 1 | 272 | 65 | 328 | 1.20e-81 | 249 |
| MS.gene051844.t1 | AT1G68850 | 46.595 | 279 | 139 | 7 | 2 | 273 | 61 | 336 | 1.77e-81 | 249 |
| MS.gene051844.t1 | AT2G41480 | 48.718 | 273 | 128 | 5 | 5 | 272 | 63 | 328 | 1.54e-79 | 243 |
| MS.gene051844.t1 | AT5G17820 | 45.926 | 270 | 134 | 5 | 3 | 272 | 56 | 313 | 4.76e-79 | 241 |
| MS.gene051844.t1 | AT5G64110 | 48.708 | 271 | 128 | 6 | 5 | 272 | 68 | 330 | 6.03e-79 | 242 |
| MS.gene051844.t1 | AT5G17820 | 45.926 | 270 | 134 | 5 | 3 | 272 | 109 | 366 | 4.14e-78 | 241 |
| MS.gene051844.t1 | AT4G11290 | 45.652 | 276 | 142 | 4 | 1 | 272 | 55 | 326 | 6.69e-78 | 239 |
| MS.gene051844.t1 | AT1G05260 | 45.196 | 281 | 136 | 6 | 1 | 273 | 56 | 326 | 6.90e-77 | 236 |
| MS.gene051844.t1 | AT1G14540 | 44.891 | 274 | 140 | 3 | 1 | 272 | 51 | 315 | 7.07e-77 | 236 |
| MS.gene051844.t1 | AT2G22420 | 44.118 | 272 | 143 | 4 | 3 | 272 | 55 | 319 | 7.15e-77 | 236 |
| MS.gene051844.t1 | AT4G25980 | 45.487 | 277 | 140 | 4 | 1 | 272 | 56 | 326 | 2.04e-76 | 235 |
| MS.gene051844.t1 | AT5G15180 | 42.491 | 273 | 151 | 4 | 1 | 272 | 62 | 329 | 3.99e-75 | 232 |
| MS.gene051844.t1 | AT1G05240 | 44.086 | 279 | 140 | 5 | 1 | 272 | 56 | 325 | 8.17e-75 | 231 |
| MS.gene051844.t1 | AT1G05250 | 44.086 | 279 | 140 | 5 | 1 | 272 | 56 | 325 | 8.17e-75 | 231 |
| MS.gene051844.t1 | AT3G01190 | 45.421 | 273 | 141 | 5 | 1 | 272 | 56 | 321 | 8.71e-75 | 231 |
| MS.gene051844.t1 | AT5G39580 | 46.840 | 269 | 134 | 6 | 5 | 272 | 59 | 319 | 3.45e-73 | 227 |
| MS.gene051844.t1 | AT2G35380 | 46.939 | 245 | 126 | 3 | 31 | 272 | 4 | 247 | 5.43e-72 | 221 |
| MS.gene051844.t1 | AT3G03670 | 45.091 | 275 | 138 | 6 | 3 | 272 | 55 | 321 | 3.30e-70 | 219 |
| MS.gene051844.t1 | AT3G21770 | 44.000 | 275 | 148 | 4 | 1 | 273 | 59 | 329 | 1.58e-69 | 218 |
| MS.gene051844.t1 | AT5G51890 | 43.796 | 274 | 141 | 7 | 3 | 272 | 58 | 322 | 2.52e-69 | 217 |
| MS.gene051844.t1 | AT5G42180 | 45.221 | 272 | 136 | 7 | 3 | 271 | 55 | 316 | 2.70e-69 | 217 |
| MS.gene051844.t1 | AT5G64100 | 44.981 | 269 | 139 | 6 | 5 | 272 | 71 | 331 | 5.10e-69 | 216 |
| MS.gene051844.t1 | AT4G37530 | 44.118 | 272 | 143 | 4 | 6 | 272 | 62 | 329 | 1.21e-67 | 213 |
| MS.gene051844.t1 | AT5G14130 | 45.018 | 271 | 138 | 5 | 6 | 272 | 67 | 330 | 5.23e-66 | 209 |
| MS.gene051844.t1 | AT1G71695 | 41.367 | 278 | 147 | 7 | 1 | 273 | 74 | 340 | 1.21e-65 | 209 |
| MS.gene051844.t1 | AT5G14130 | 45.018 | 271 | 138 | 5 | 6 | 272 | 108 | 371 | 1.48e-65 | 209 |
| MS.gene051844.t1 | AT4G37520 | 42.279 | 272 | 148 | 4 | 6 | 272 | 62 | 329 | 1.19e-64 | 205 |
| MS.gene051844.t1 | AT2G18980 | 42.435 | 271 | 145 | 4 | 6 | 272 | 60 | 323 | 1.51e-64 | 205 |
| MS.gene051844.t1 | AT5G24070 | 39.928 | 278 | 154 | 6 | 1 | 273 | 67 | 336 | 2.75e-64 | 205 |
| MS.gene051844.t1 | AT4G33870 | 37.049 | 305 | 150 | 6 | 1 | 268 | 98 | 397 | 6.35e-64 | 206 |
| MS.gene051844.t1 | AT4G30170 | 42.066 | 271 | 146 | 4 | 6 | 272 | 62 | 325 | 2.74e-63 | 202 |
| MS.gene051844.t1 | AT1G77100 | 43.223 | 273 | 145 | 5 | 2 | 272 | 55 | 319 | 3.27e-63 | 201 |
| MS.gene051844.t1 | AT2G43480 | 40.794 | 277 | 151 | 6 | 1 | 272 | 67 | 335 | 1.35e-62 | 200 |
| MS.gene051844.t1 | AT4G37520 | 41.544 | 272 | 147 | 5 | 6 | 272 | 62 | 326 | 2.24e-62 | 199 |
| MS.gene051844.t1 | AT3G49960 | 41.544 | 272 | 150 | 4 | 6 | 272 | 62 | 329 | 1.95e-61 | 197 |
| MS.gene051844.t1 | AT4G33420 | 42.701 | 274 | 140 | 8 | 1 | 272 | 67 | 325 | 7.64e-61 | 195 |
| MS.gene051844.t1 | AT5G67400 | 40.809 | 272 | 152 | 4 | 6 | 272 | 62 | 329 | 2.45e-60 | 194 |
| MS.gene051844.t1 | AT4G33420 | 42.701 | 274 | 140 | 8 | 1 | 272 | 114 | 372 | 2.91e-60 | 195 |
| MS.gene051844.t1 | AT4G17690 | 40.925 | 281 | 143 | 6 | 2 | 273 | 57 | 323 | 2.01e-58 | 189 |
| MS.gene051844.t1 | AT4G26010 | 40.659 | 273 | 142 | 8 | 3 | 272 | 54 | 309 | 2.27e-58 | 189 |
| MS.gene051844.t1 | AT4G26010 | 40.659 | 273 | 142 | 8 | 3 | 272 | 82 | 337 | 3.89e-58 | 189 |
| MS.gene051844.t1 | AT5G22410 | 40.794 | 277 | 144 | 9 | 1 | 269 | 58 | 322 | 4.12e-58 | 189 |
| MS.gene051844.t1 | AT5G47000 | 41.516 | 277 | 148 | 6 | 2 | 273 | 64 | 331 | 1.95e-57 | 187 |
| MS.gene051844.t1 | AT2G39040 | 41.281 | 281 | 150 | 7 | 1 | 272 | 76 | 350 | 4.15e-57 | 186 |
| MS.gene051844.t1 | AT1G30870 | 39.130 | 276 | 155 | 6 | 1 | 273 | 81 | 346 | 3.42e-56 | 184 |
| MS.gene051844.t1 | AT4G31760 | 40.146 | 274 | 148 | 8 | 5 | 272 | 63 | 326 | 1.45e-55 | 182 |
| MS.gene051844.t1 | AT2G34060 | 40.511 | 274 | 150 | 7 | 6 | 271 | 77 | 345 | 1.53e-55 | 182 |
| MS.gene051844.t1 | AT2G24800 | 40.364 | 275 | 147 | 8 | 5 | 272 | 65 | 329 | 9.27e-55 | 180 |
| MS.gene051844.t1 | AT3G28200 | 37.818 | 275 | 157 | 5 | 2 | 272 | 52 | 316 | 5.22e-54 | 177 |
| MS.gene051844.t1 | AT4G37530 | 44.495 | 218 | 116 | 3 | 6 | 218 | 62 | 279 | 7.09e-54 | 176 |
| MS.gene051844.t1 | AT1G24110 | 39.852 | 271 | 154 | 5 | 6 | 272 | 57 | 322 | 5.69e-53 | 175 |
| MS.gene051844.t1 | AT5G40150 | 37.455 | 275 | 159 | 5 | 2 | 272 | 63 | 328 | 1.95e-52 | 174 |
| MS.gene051844.t1 | AT1G34510 | 36.630 | 273 | 153 | 7 | 3 | 272 | 54 | 309 | 2.43e-51 | 171 |
| MS.gene051844.t1 | AT4G21960 | 32.734 | 278 | 166 | 6 | 4 | 273 | 64 | 328 | 8.07e-48 | 162 |
| MS.gene051844.t1 | AT2G37130 | 34.752 | 282 | 158 | 8 | 2 | 272 | 30 | 296 | 1.53e-44 | 152 |
| MS.gene051844.t1 | AT2G37130 | 34.752 | 282 | 158 | 8 | 2 | 272 | 61 | 327 | 3.47e-44 | 152 |
| MS.gene051844.t1 | AT3G17070 | 34.783 | 276 | 160 | 6 | 3 | 268 | 70 | 335 | 5.57e-44 | 152 |
| MS.gene051844.t1 | AT4G25980 | 51.471 | 136 | 64 | 2 | 1 | 136 | 101 | 234 | 7.76e-40 | 140 |
| MS.gene051844.t1 | AT5G39580 | 53.237 | 139 | 62 | 3 | 5 | 143 | 59 | 194 | 5.71e-38 | 134 |
| MS.gene051844.t1 | AT3G17070 | 33.083 | 266 | 157 | 7 | 13 | 268 | 18 | 272 | 4.42e-37 | 132 |
| MS.gene051844.t1 | AT2G24800 | 45.865 | 133 | 64 | 4 | 5 | 134 | 65 | 192 | 2.79e-26 | 103 |
| MS.gene051844.t1 | AT1G77490 | 24.632 | 272 | 151 | 11 | 5 | 257 | 106 | 342 | 2.08e-13 | 70.1 |
| MS.gene051844.t1 | AT3G42570 | 35.052 | 97 | 62 | 1 | 41 | 136 | 53 | 149 | 2.09e-13 | 66.6 |
| MS.gene051844.t1 | AT1G77490 | 24.632 | 272 | 151 | 11 | 5 | 257 | 106 | 342 | 2.27e-13 | 70.1 |
Find 49 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTATAAGAACTTGCTTAA+TGG | 0.138200 | 8.2:-6756153 | MS.gene051844:CDS |
| ACAGATGTTGTTTCTTTATC+AGG | 0.202122 | 8.2:-6756897 | MS.gene051844:intron |
| CCTAATATCAACTCTGTTAG+AGG | 0.217344 | 8.2:-6757400 | MS.gene051844:CDS |
| CAAAATTTGTGTCCTCAAAC+TGG | 0.256498 | 8.2:-6756234 | MS.gene051844:CDS |
| TCTCCATCAGACCCAGTCTT+TGG | 0.280146 | 8.2:+6755982 | None:intergenic |
| CCTCTAACAGAGTTGATATT+AGG | 0.295967 | 8.2:+6757400 | None:intergenic |
| GGCAGAGTGGTGGTCCTTCA+TGG | 0.301720 | 8.2:-6757046 | MS.gene051844:intron |
| TTGTGATGGATCGATATTAT+TGG | 0.350338 | 8.2:-6757455 | MS.gene051844:CDS |
| ACACAACTGCAGTTCTTGAT+AGG | 0.384456 | 8.2:-6756203 | MS.gene051844:CDS |
| TCGTTGTAGCTTTGTACTAA+AGG | 0.421872 | 8.2:+6756066 | None:intergenic |
| GGGAATATAAATCCAAAGAC+TGG | 0.423576 | 8.2:-6755994 | MS.gene051844:CDS |
| CCTTCATGGAGTGTTATGTT+AGG | 0.435068 | 8.2:-6757032 | MS.gene051844:CDS |
| CCAGACAGTACACTGGAAAC+TGG | 0.438929 | 8.2:-6756273 | MS.gene051844:CDS |
| GTTTCAAAGTTTACCAATGT+AGG | 0.441204 | 8.2:-6756930 | MS.gene051844:CDS |
| TACAAGAAGAACAGAATCTC+TGG | 0.463222 | 8.2:+6757291 | None:intergenic |
| TGTCAAATCTATGATCAAGA+TGG | 0.466633 | 8.2:-6756016 | MS.gene051844:CDS |
| ATAGTATCTAGTGGGTCAAA+TGG | 0.469011 | 8.2:+6756954 | None:intergenic |
| CTGGGTCTGATGGAGAGATT+AGG | 0.471470 | 8.2:-6755975 | MS.gene051844:CDS |
| TTTCAAAGTTTACCAATGTA+GGG | 0.472928 | 8.2:-6756929 | MS.gene051844:CDS |
| AAAGACGGAACAATCTCAAA+TGG | 0.474209 | 8.2:-6757005 | MS.gene051844:CDS |
| GTCAAATCTATGATCAAGAT+GGG | 0.474767 | 8.2:-6756015 | MS.gene051844:CDS |
| AACAGAATCTCTGGCAGCTA+TGG | 0.475788 | 8.2:+6757300 | None:intergenic |
| TTTGATTATCAGGGTTGTGA+TGG | 0.484674 | 8.2:-6757469 | MS.gene051844:intron |
| GTGTTTCCATCCCCAGTTTG+AGG | 0.487886 | 8.2:+6756222 | None:intergenic |
| AAAATTTGTGTCCTCAAACT+GGG | 0.489367 | 8.2:-6756233 | MS.gene051844:CDS |
| TGTGAAGGTGCTCATACGAT+TGG | 0.493811 | 8.2:-6756354 | MS.gene051844:intron |
| AAGAACTTGCTTAATGGAAA+GGG | 0.497363 | 8.2:-6756147 | MS.gene051844:CDS |
| TAAGAACTTGCTTAATGGAA+AGG | 0.498719 | 8.2:-6756148 | MS.gene051844:CDS |
| GTGAAGGTGCTCATACGATT+GGG | 0.512271 | 8.2:-6756353 | MS.gene051844:intron |
| AATCCAAAGACTGGGTCTGA+TGG | 0.518229 | 8.2:-6755985 | MS.gene051844:CDS |
| TGTTGTTGATACAATCAAAA+CGG | 0.525649 | 8.2:-6757371 | MS.gene051844:CDS |
| TTGTGTCCTCAAACTGGGGA+TGG | 0.532776 | 8.2:-6756228 | MS.gene051844:CDS |
| CCAGTTTCCAGTGTACTGTC+TGG | 0.541281 | 8.2:+6756273 | None:intergenic |
| AAATTTGTGTCCTCAAACTG+GGG | 0.569738 | 8.2:-6756232 | MS.gene051844:CDS |
| TGTGAGATTGAGCCCTACAT+TGG | 0.575552 | 8.2:+6756917 | None:intergenic |
| AAATGGATCTCTAGCAAATG+TGG | 0.576250 | 8.2:-6756988 | MS.gene051844:CDS |
| TTTGAAACAATAGTATCTAG+TGG | 0.578610 | 8.2:+6756945 | None:intergenic |
| TGATACAATCAAAACGGCAG+TGG | 0.588096 | 8.2:-6757365 | MS.gene051844:CDS |
| TCTAGTGGGTCAAATGGAGA+AGG | 0.593026 | 8.2:+6756960 | None:intergenic |
| TTGAAACAATAGTATCTAGT+GGG | 0.599339 | 8.2:+6756946 | None:intergenic |
| TATAATGTTTGGCAGAGTGG+TGG | 0.612855 | 8.2:-6757056 | MS.gene051844:intron |
| GATGGATCGATATTATTGGA+TGG | 0.618908 | 8.2:-6757451 | MS.gene051844:CDS |
| AGGTTCACCAGACAGTACAC+TGG | 0.630979 | 8.2:-6756280 | MS.gene051844:CDS |
| GGAATATAAATCCAAAGACT+GGG | 0.637695 | 8.2:-6755993 | MS.gene051844:CDS |
| CCTAACATAACACTCCATGA+AGG | 0.648975 | 8.2:+6757032 | None:intergenic |
| GCAGTGGAGAGTGCGTGTAG+CGG | 0.660124 | 8.2:-6757349 | MS.gene051844:CDS |
| GTTATGTTAGGACGAAAAGA+CGG | 0.670152 | 8.2:-6757020 | MS.gene051844:CDS |
| GGATCGATATTATTGGATGG+TGG | 0.673277 | 8.2:-6757448 | MS.gene051844:CDS |
| TCAAATCTATGATCAAGATG+GGG | 0.691790 | 8.2:-6756014 | MS.gene051844:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATTATTTTGATTATC+AGG | - | chr8.2:6756201-6756220 | MS.gene051844:CDS | 10.0% |
| !!! | AATTATTATTTTGATTATCA+GGG | - | chr8.2:6756202-6756221 | MS.gene051844:CDS | 10.0% |
| !! | AAGTAATTAATTGAAAGTTA+TGG | + | chr8.2:6756536-6756555 | None:intergenic | 15.0% |
| !! | AAGTATGACTATAAATAAAT+AGG | - | chr8.2:6756858-6756877 | MS.gene051844:intron | 15.0% |
| !! | AGAATAAATTAAGAAAGTTA+TGG | + | chr8.2:6756431-6756450 | None:intergenic | 15.0% |
| !! | AGTAATTAATTGAAAGTTAT+GGG | + | chr8.2:6756535-6756554 | None:intergenic | 15.0% |
| !! | AGTATGACTATAAATAAATA+GGG | - | chr8.2:6756859-6756878 | MS.gene051844:intron | 15.0% |
| !! | GAATAAATTAAGAAAGTTAT+GGG | + | chr8.2:6756430-6756449 | None:intergenic | 15.0% |
| !!! | TTTATAGTCATACTTATTTT+AGG | + | chr8.2:6756853-6756872 | None:intergenic | 15.0% |
| !! | TATGACCATTATATAATGTT+TGG | - | chr8.2:6756613-6756632 | MS.gene051844:intron | 20.0% |
| !!! | ACTTTTTTACTAAAATCAGA+AGG | + | chr8.2:6757109-6757128 | None:intergenic | 20.0% |
| !!! | TATTTAAGGTCAAATTGTTT+AGG | + | chr8.2:6757216-6757235 | None:intergenic | 20.0% |
| ! | AAAAGTGAACCATAGTAATT+AGG | - | chr8.2:6757123-6757142 | MS.gene051844:intron | 25.0% |
| ! | AAACTAGCTAACAATCTTTA+AGG | - | chr8.2:6757038-6757057 | MS.gene051844:CDS | 25.0% |
| ! | AACTAGCTAACAATCTTTAA+GGG | - | chr8.2:6757039-6757058 | MS.gene051844:CDS | 25.0% |
| ! | AATTAAGAAAGTTATGGGAT+TGG | + | chr8.2:6756425-6756444 | None:intergenic | 25.0% |
| ! | GAGATCCATAGAAATTATAT+AGG | - | chr8.2:6756827-6756846 | MS.gene051844:intron | 25.0% |
| ! | GATAAAATTAAGCAAGTAGA+TGG | + | chr8.2:6757249-6757268 | None:intergenic | 25.0% |
| ! | GTAAATACTGAATTTCATTG+TGG | - | chr8.2:6756805-6756824 | MS.gene051844:intron | 25.0% |
| ! | TCTAACTCAATTCCAAAAAT+AGG | + | chr8.2:6756891-6756910 | None:intergenic | 25.0% |
| ! | TGTTGTTGATACAATCAAAA+CGG | - | chr8.2:6756309-6756328 | MS.gene051844:CDS | 25.0% |
| ! | TTAGGCCTATATAATTTCTA+TGG | + | chr8.2:6756835-6756854 | None:intergenic | 25.0% |
| ! | TTGAAACAATAGTATCTAGT+GGG | + | chr8.2:6756737-6756756 | None:intergenic | 25.0% |
| ! | TTTCAAAGTTTACCAATGTA+GGG | - | chr8.2:6756751-6756770 | MS.gene051844:intron | 25.0% |
| ! | TTTGAATTATACATCTGTGA+AGG | - | chr8.2:6757311-6757330 | MS.gene051844:CDS | 25.0% |
| !! | AATAGATTGTTCAACTTTTC+TGG | - | chr8.2:6757374-6757393 | MS.gene051844:CDS | 25.0% |
| !! | TACTATAAGAACTTGCTTAA+TGG | - | chr8.2:6757527-6757546 | MS.gene051844:intron | 25.0% |
| !! | TTTGAAACAATAGTATCTAG+TGG | + | chr8.2:6756738-6756757 | None:intergenic | 25.0% |
| !!! | ATGGATTCAAGTGTTATTTA+AGG | + | chr8.2:6757230-6757249 | None:intergenic | 25.0% |
| !!! | CAGTATTTTGTTTATAGTCA+AGG | - | chr8.2:6756460-6756479 | MS.gene051844:intron | 25.0% |
| AAAATTTGTGTCCTCAAACT+GGG | - | chr8.2:6757447-6757466 | MS.gene051844:CDS | 30.0% | |
| CGTTAAATGCCTAATTACTA+TGG | + | chr8.2:6757135-6757154 | None:intergenic | 30.0% | |
| CTCTGCCAAACATTATATAA+TGG | + | chr8.2:6756621-6756640 | None:intergenic | 30.0% | |
| GGAATATAAATCCAAAGACT+GGG | - | chr8.2:6757687-6757706 | MS.gene051844:intron | 30.0% | |
| GTCAAATCTATGATCAAGAT+GGG | - | chr8.2:6757665-6757684 | MS.gene051844:intron | 30.0% | |
| GTTTCAAAGTTTACCAATGT+AGG | - | chr8.2:6756750-6756769 | MS.gene051844:intron | 30.0% | |
| TAATTAGGCATTTAACGATG+AGG | - | chr8.2:6757138-6757157 | MS.gene051844:intron | 30.0% | |
| TCAAATCTATGATCAAGATG+GGG | - | chr8.2:6757666-6757685 | MS.gene051844:intron | 30.0% | |
| TGTCAAATCTATGATCAAGA+TGG | - | chr8.2:6757664-6757683 | MS.gene051844:intron | 30.0% | |
| TTATATAATGTTTGGCAGAG+TGG | - | chr8.2:6756621-6756640 | MS.gene051844:intron | 30.0% | |
| ! | AAGAACTTGCTTAATGGAAA+GGG | - | chr8.2:6757533-6757552 | MS.gene051844:intron | 30.0% |
| ! | TAAGAACTTGCTTAATGGAA+AGG | - | chr8.2:6757532-6757551 | MS.gene051844:intron | 30.0% |
| ! | TTTGAGGACACAAATTTTGT+AGG | + | chr8.2:6757445-6757464 | None:intergenic | 30.0% |
| !! | ACAGATGTTGTTTCTTTATC+AGG | - | chr8.2:6756783-6756802 | MS.gene051844:intron | 30.0% |
| !! | TTGTGATGGATCGATATTAT+TGG | - | chr8.2:6756225-6756244 | MS.gene051844:CDS | 30.0% |
| !!! | GATTTTGATTTCTACTGATG+AGG | - | chr8.2:6757574-6757593 | MS.gene051844:intron | 30.0% |
| !!! | TTAGCTAGTTTTGAAGAGAT+GGG | + | chr8.2:6757029-6757048 | None:intergenic | 30.0% |
| AAAGACGGAACAATCTCAAA+TGG | - | chr8.2:6756675-6756694 | MS.gene051844:intron | 35.0% | |
| AAATGGATCTCTAGCAAATG+TGG | - | chr8.2:6756692-6756711 | MS.gene051844:intron | 35.0% | |
| AAATTTGTGTCCTCAAACTG+GGG | - | chr8.2:6757448-6757467 | MS.gene051844:CDS | 35.0% | |
| CAAAATTTGTGTCCTCAAAC+TGG | - | chr8.2:6757446-6757465 | MS.gene051844:CDS | 35.0% | |
| CACGAATTTGTACGTTGTTT+CGG | + | chr8.2:6756120-6756139 | None:intergenic | 35.0% | |
| CCTAATATCAACTCTGTTAG+AGG | - | chr8.2:6756280-6756299 | MS.gene051844:CDS | 35.0% | |
| GATGGATCGATATTATTGGA+TGG | - | chr8.2:6756229-6756248 | MS.gene051844:CDS | 35.0% | |
| GGGAATATAAATCCAAAGAC+TGG | - | chr8.2:6757686-6757705 | MS.gene051844:intron | 35.0% | |
| GTTATGTTAGGACGAAAAGA+CGG | - | chr8.2:6756660-6756679 | MS.gene051844:intron | 35.0% | |
| TACAAGAAGAACAGAATCTC+TGG | + | chr8.2:6756392-6756411 | None:intergenic | 35.0% | |
| TTTGATTATCAGGGTTGTGA+TGG | - | chr8.2:6756211-6756230 | MS.gene051844:CDS | 35.0% | |
| ! | AGGACACAAATTTTGTAGGT+CGG | + | chr8.2:6757441-6757460 | None:intergenic | 35.0% |
| ! | ATAGGGCATGATCCTATTTT+TGG | - | chr8.2:6756876-6756895 | MS.gene051844:intron | 35.0% |
| ! | ATAGTATCTAGTGGGTCAAA+TGG | + | chr8.2:6756729-6756748 | None:intergenic | 35.0% |
| ! | GATAATGCTACGCTTTTCTT+TGG | - | chr8.2:6757635-6757654 | MS.gene051844:intron | 35.0% |
| !! | CCTCTAACAGAGTTGATATT+AGG | + | chr8.2:6756283-6756302 | None:intergenic | 35.0% |
| !! | TCGTTGTAGCTTTGTACTAA+AGG | + | chr8.2:6757617-6757636 | None:intergenic | 35.0% |
| !!! | GTTAGCTAGTTTTGAAGAGA+TGG | + | chr8.2:6757030-6757049 | None:intergenic | 35.0% |
| !!! | TTGTTCAACTTTTCTGGAAC+AGG | - | chr8.2:6757380-6757399 | MS.gene051844:CDS | 35.0% |
| ACACAACTGCAGTTCTTGAT+AGG | - | chr8.2:6757477-6757496 | MS.gene051844:intron | 40.0% | |
| CATACATGTACATGCATGCA+TGG | - | chr8.2:6756021-6756040 | MS.gene051844:CDS | 40.0% | |
| CCTAACATAACACTCCATGA+AGG | + | chr8.2:6756651-6756670 | None:intergenic | 40.0% | |
| GGATCGATATTATTGGATGG+TGG | - | chr8.2:6756232-6756251 | MS.gene051844:CDS | 40.0% | |
| TATAATGTTTGGCAGAGTGG+TGG | - | chr8.2:6756624-6756643 | MS.gene051844:intron | 40.0% | |
| TGATACAATCAAAACGGCAG+TGG | - | chr8.2:6756315-6756334 | MS.gene051844:CDS | 40.0% | |
| TTGCAAGACTAGACATTTGC+AGG | + | chr8.2:6756941-6756960 | None:intergenic | 40.0% | |
| ! | CCTTCATGGAGTGTTATGTT+AGG | - | chr8.2:6756648-6756667 | MS.gene051844:intron | 40.0% |
| ! | TATAGTCAAGGAGCATGCAT+AGG | - | chr8.2:6756472-6756491 | MS.gene051844:intron | 40.0% |
| !!! | GCAAGATGTCACTAGCTTTT+GGG | - | chr8.2:6756970-6756989 | MS.gene051844:CDS | 40.0% |
| AACAGAATCTCTGGCAGCTA+TGG | + | chr8.2:6756383-6756402 | None:intergenic | 45.0% | |
| AATCCAAAGACTGGGTCTGA+TGG | - | chr8.2:6757695-6757714 | MS.gene051844:intron | 45.0% | |
| CAAGACTAGACATTTGCAGG+TGG | + | chr8.2:6756938-6756957 | None:intergenic | 45.0% | |
| TGTGAGATTGAGCCCTACAT+TGG | + | chr8.2:6756766-6756785 | None:intergenic | 45.0% | |
| ! | TCTAGTGGGTCAAATGGAGA+AGG | + | chr8.2:6756723-6756742 | None:intergenic | 45.0% |
| !! | GTGAAGGTGCTCATACGATT+GGG | - | chr8.2:6757327-6757346 | MS.gene051844:CDS | 45.0% |
| !! | TGTGAAGGTGCTCATACGAT+TGG | - | chr8.2:6757326-6757345 | MS.gene051844:CDS | 45.0% |
| !!! | CGCAAGATGTCACTAGCTTT+TGG | - | chr8.2:6756969-6756988 | MS.gene051844:CDS | 45.0% |
| AGGTTCACCAGACAGTACAC+TGG | - | chr8.2:6757400-6757419 | MS.gene051844:CDS | 50.0% | |
| CCAGACAGTACACTGGAAAC+TGG | - | chr8.2:6757407-6757426 | MS.gene051844:CDS | 50.0% | |
| CCAGTTTCCAGTGTACTGTC+TGG | + | chr8.2:6757410-6757429 | None:intergenic | 50.0% | |
| CTGGGTCTGATGGAGAGATT+AGG | - | chr8.2:6757705-6757724 | MS.gene051844:intron | 50.0% | |
| GTGTTTCCATCCCCAGTTTG+AGG | + | chr8.2:6757461-6757480 | None:intergenic | 50.0% | |
| TCTCCATCAGACCCAGTCTT+TGG | + | chr8.2:6757701-6757720 | None:intergenic | 50.0% | |
| TTGTGTCCTCAAACTGGGGA+TGG | - | chr8.2:6757452-6757471 | MS.gene051844:CDS | 50.0% | |
| GGCAGAGTGGTGGTCCTTCA+TGG | - | chr8.2:6756634-6756653 | MS.gene051844:intron | 60.0% | |
| ! | GCAGTGGAGAGTGCGTGTAG+CGG | - | chr8.2:6756331-6756350 | MS.gene051844:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 6755948 | 6757754 | 6755948 | ID=MS.gene051844 |
| chr8.2 | mRNA | 6755948 | 6757754 | 6755948 | ID=MS.gene051844.t1;Parent=MS.gene051844 |
| chr8.2 | exon | 6757707 | 6757754 | 6757707 | ID=MS.gene051844.t1.exon1;Parent=MS.gene051844.t1 |
| chr8.2 | CDS | 6757707 | 6757754 | 6757707 | ID=cds.MS.gene051844.t1;Parent=MS.gene051844.t1 |
| chr8.2 | exon | 6757294 | 6757479 | 6757294 | ID=MS.gene051844.t1.exon2;Parent=MS.gene051844.t1 |
| chr8.2 | CDS | 6757294 | 6757479 | 6757294 | ID=cds.MS.gene051844.t1;Parent=MS.gene051844.t1 |
| chr8.2 | exon | 6756898 | 6757063 | 6756898 | ID=MS.gene051844.t1.exon3;Parent=MS.gene051844.t1 |
| chr8.2 | CDS | 6756898 | 6757063 | 6756898 | ID=cds.MS.gene051844.t1;Parent=MS.gene051844.t1 |
| chr8.2 | exon | 6755948 | 6756369 | 6755948 | ID=MS.gene051844.t1.exon4;Parent=MS.gene051844.t1 |
| chr8.2 | CDS | 6755948 | 6756369 | 6755948 | ID=cds.MS.gene051844.t1;Parent=MS.gene051844.t1 |
| Gene Sequence |
| Protein sequence |
