Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057550.t1 | XP_003621331.1 | 85.5 | 365 | 53 | 0 | 2 | 366 | 3 | 367 | 1.70E-182 | 648.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057550.t1 | P93324 | 62.1 | 367 | 130 | 3 | 7 | 366 | 8 | 372 | 1.3e-130 | 467.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057550.t1 | G7L359 | 85.5 | 365 | 53 | 0 | 2 | 366 | 3 | 367 | 1.2e-182 | 648.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049549 | MS.gene057550 | 0.825151 | 5.48E-54 | -1.69E-46 |
MS.gene051127 | MS.gene057550 | 0.804197 | 2.43E-49 | -1.69E-46 |
MS.gene052211 | MS.gene057550 | 0.817659 | 2.94E-52 | -1.69E-46 |
MS.gene053887 | MS.gene057550 | 0.809779 | 1.60E-50 | -1.69E-46 |
MS.gene054742 | MS.gene057550 | 0.809129 | 2.20E-50 | -1.69E-46 |
MS.gene055124 | MS.gene057550 | 0.805698 | 1.18E-49 | -1.69E-46 |
MS.gene055240 | MS.gene057550 | 0.802526 | 5.38E-49 | -1.69E-46 |
MS.gene055959 | MS.gene057550 | 0.825126 | 5.56E-54 | -1.69E-46 |
MS.gene056224 | MS.gene057550 | 0.810834 | 9.46E-51 | -1.69E-46 |
MS.gene056748 | MS.gene057550 | 0.821387 | 4.15E-53 | -1.69E-46 |
MS.gene056922 | MS.gene057550 | 0.801069 | 1.07E-48 | -1.69E-46 |
MS.gene057544 | MS.gene057550 | 0.807442 | 5.05E-50 | -1.69E-46 |
MS.gene057550 | MS.gene058099 | 0.8105 | 1.12E-50 | -1.69E-46 |
MS.gene057550 | MS.gene059037 | 0.808599 | 2.86E-50 | -1.69E-46 |
MS.gene057550 | MS.gene059955 | 0.80103 | 1.09E-48 | -1.69E-46 |
MS.gene057550 | MS.gene061157 | 0.819126 | 1.37E-52 | -1.69E-46 |
MS.gene057550 | MS.gene061889 | 0.806621 | 7.53E-50 | -1.69E-46 |
MS.gene057550 | MS.gene063148 | 0.801085 | 1.06E-48 | -1.69E-46 |
MS.gene057550 | MS.gene063988 | 0.819792 | 9.64E-53 | -1.69E-46 |
MS.gene057550 | MS.gene065724 | 0.821018 | 5.05E-53 | -1.69E-46 |
MS.gene057550 | MS.gene065728 | 0.815448 | 9.20E-52 | -1.69E-46 |
MS.gene057550 | MS.gene066417 | 0.813585 | 2.38E-51 | -1.69E-46 |
MS.gene057550 | MS.gene066602 | 0.809017 | 2.33E-50 | -1.69E-46 |
MS.gene057550 | MS.gene069095 | 0.804799 | 1.82E-49 | -1.69E-46 |
MS.gene057550 | MS.gene069166 | 0.812638 | 3.83E-51 | -1.69E-46 |
MS.gene057550 | MS.gene069482 | 0.828857 | 7.12E-55 | -1.69E-46 |
MS.gene057550 | MS.gene073526 | 0.806095 | 9.71E-50 | -1.69E-46 |
MS.gene057550 | MS.gene08402 | 0.803119 | 4.06E-49 | -1.69E-46 |
MS.gene057550 | MS.gene08407 | 0.809487 | 1.85E-50 | -1.69E-46 |
MS.gene057550 | MS.gene08733 | 0.801144 | 1.03E-48 | -1.69E-46 |
MS.gene057550 | MS.gene20639 | 0.84063 | 7.74E-58 | -1.69E-46 |
MS.gene057550 | MS.gene21757 | 0.824073 | 9.83E-54 | -1.69E-46 |
MS.gene057550 | MS.gene21758 | 0.80973 | 1.64E-50 | -1.69E-46 |
MS.gene057550 | MS.gene21867 | 0.815815 | 7.62E-52 | -1.69E-46 |
MS.gene057550 | MS.gene21868 | 0.825082 | 5.69E-54 | -1.69E-46 |
MS.gene057550 | MS.gene23573 | 0.810502 | 1.12E-50 | -1.69E-46 |
MS.gene057550 | MS.gene24862 | 0.81786 | 2.65E-52 | -1.69E-46 |
MS.gene057550 | MS.gene25134 | 0.806867 | 6.68E-50 | -1.69E-46 |
MS.gene057550 | MS.gene25701 | 0.800199 | 1.61E-48 | -1.69E-46 |
MS.gene057550 | MS.gene26403 | 0.80978 | 1.60E-50 | -1.69E-46 |
MS.gene057550 | MS.gene28427 | 0.80704 | 6.14E-50 | -1.69E-46 |
MS.gene057550 | MS.gene28594 | 0.809215 | 2.11E-50 | -1.69E-46 |
MS.gene057550 | MS.gene28724 | 0.81228 | 4.59E-51 | -1.69E-46 |
MS.gene057550 | MS.gene30394 | 0.800294 | 1.54E-48 | -1.69E-46 |
MS.gene057550 | MS.gene31542 | 0.818315 | 2.09E-52 | -1.69E-46 |
MS.gene057550 | MS.gene33445 | 0.825677 | 4.11E-54 | -1.69E-46 |
MS.gene057550 | MS.gene33698 | 0.805955 | 1.04E-49 | -1.69E-46 |
MS.gene057550 | MS.gene35105 | 0.817588 | 3.05E-52 | -1.69E-46 |
MS.gene057550 | MS.gene35208 | 0.812192 | 4.80E-51 | -1.69E-46 |
MS.gene057550 | MS.gene35213 | 0.809643 | 1.71E-50 | -1.69E-46 |
MS.gene057550 | MS.gene35741 | 0.81093 | 9.02E-51 | -1.69E-46 |
MS.gene057550 | MS.gene38435 | 0.824217 | 9.10E-54 | -1.69E-46 |
MS.gene057550 | MS.gene39533 | 0.803792 | 2.94E-49 | -1.69E-46 |
MS.gene057550 | MS.gene40846 | 0.826453 | 2.69E-54 | -1.69E-46 |
MS.gene057550 | MS.gene41490 | 0.801824 | 7.50E-49 | -1.69E-46 |
MS.gene057550 | MS.gene42005 | 0.804979 | 1.67E-49 | -1.69E-46 |
MS.gene057550 | MS.gene43874 | 0.806922 | 6.50E-50 | -1.69E-46 |
MS.gene057550 | MS.gene44712 | 0.815731 | 7.95E-52 | -1.69E-46 |
MS.gene057550 | MS.gene45223 | 0.965047 | 4.22E-124 | -1.69E-46 |
MS.gene057550 | MS.gene45228 | 0.809634 | 1.72E-50 | -1.69E-46 |
MS.gene057550 | MS.gene47576 | 0.803008 | 4.28E-49 | -1.69E-46 |
MS.gene057550 | MS.gene47719 | 0.81021 | 1.29E-50 | -1.69E-46 |
MS.gene057550 | MS.gene47721 | 0.804311 | 2.30E-49 | -1.69E-46 |
MS.gene057550 | MS.gene48023 | 0.801301 | 9.61E-49 | -1.69E-46 |
MS.gene057550 | MS.gene49021 | 0.839723 | 1.34E-57 | -1.69E-46 |
MS.gene057550 | MS.gene50279 | 0.801322 | 9.51E-49 | -1.69E-46 |
MS.gene057550 | MS.gene51595 | 0.812519 | 4.07E-51 | -1.69E-46 |
MS.gene057550 | MS.gene51735 | 0.877797 | 4.71E-69 | -1.69E-46 |
MS.gene057550 | MS.gene51742 | 0.850376 | 1.77E-60 | -1.69E-46 |
MS.gene057550 | MS.gene52024 | 0.810978 | 8.81E-51 | -1.69E-46 |
MS.gene057550 | MS.gene52370 | 0.820569 | 6.40E-53 | -1.69E-46 |
MS.gene057550 | MS.gene53442 | 0.803184 | 3.93E-49 | -1.69E-46 |
MS.gene057550 | MS.gene54029 | 0.819365 | 1.21E-52 | -1.69E-46 |
MS.gene057550 | MS.gene54574 | 0.810181 | 1.31E-50 | -1.69E-46 |
MS.gene057550 | MS.gene54667 | 0.829665 | 4.53E-55 | -1.69E-46 |
MS.gene057550 | MS.gene56375 | 0.861965 | 7.08E-64 | -1.69E-46 |
MS.gene057550 | MS.gene56381 | 0.811806 | 5.82E-51 | -1.69E-46 |
MS.gene057550 | MS.gene56384 | 0.848806 | 4.85E-60 | -1.69E-46 |
MS.gene057550 | MS.gene56509 | 0.82186 | 3.23E-53 | -1.69E-46 |
MS.gene057550 | MS.gene57085 | 0.827043 | 1.95E-54 | -1.69E-46 |
MS.gene057550 | MS.gene57718 | 0.808245 | 3.41E-50 | -1.69E-46 |
MS.gene057550 | MS.gene58107 | 0.800653 | 1.30E-48 | -1.69E-46 |
MS.gene057550 | MS.gene59002 | 0.801622 | 8.25E-49 | -1.69E-46 |
MS.gene057550 | MS.gene59005 | 0.848428 | 6.17E-60 | -1.69E-46 |
MS.gene057550 | MS.gene59333 | 0.806633 | 7.48E-50 | -1.69E-46 |
MS.gene057550 | MS.gene61142 | 0.807735 | 4.37E-50 | -1.69E-46 |
MS.gene057550 | MS.gene61194 | 0.833473 | 5.23E-56 | -1.69E-46 |
MS.gene057550 | MS.gene62114 | 0.819285 | 1.26E-52 | -1.69E-46 |
MS.gene057550 | MS.gene63444 | 0.812705 | 3.71E-51 | -1.69E-46 |
MS.gene057550 | MS.gene63914 | 0.80651 | 7.94E-50 | -1.69E-46 |
MS.gene057550 | MS.gene64686 | 0.810223 | 1.28E-50 | -1.69E-46 |
MS.gene057550 | MS.gene64687 | 0.803963 | 2.71E-49 | -1.69E-46 |
MS.gene057550 | MS.gene69635 | 0.813579 | 2.38E-51 | -1.69E-46 |
MS.gene057550 | MS.gene69966 | 0.800578 | 1.35E-48 | -1.69E-46 |
MS.gene057550 | MS.gene73788 | 0.804141 | 2.49E-49 | -1.69E-46 |
MS.gene057550 | MS.gene74774 | 0.801511 | 8.70E-49 | -1.69E-46 |
MS.gene057550 | MS.gene75396 | 0.80466 | 1.94E-49 | -1.69E-46 |
MS.gene057550 | MS.gene75472 | 0.824084 | 9.77E-54 | -1.69E-46 |
MS.gene057550 | MS.gene76738 | 0.815089 | 1.11E-51 | -1.69E-46 |
MS.gene057550 | MS.gene80293 | 0.802758 | 4.82E-49 | -1.69E-46 |
MS.gene057550 | MS.gene80744 | 0.826306 | 2.92E-54 | -1.69E-46 |
MS.gene057550 | MS.gene81349 | 0.811311 | 7.46E-51 | -1.69E-46 |
MS.gene057550 | MS.gene81504 | 0.821911 | 3.14E-53 | -1.69E-46 |
MS.gene057550 | MS.gene81505 | 0.830568 | 2.73E-55 | -1.69E-46 |
MS.gene057550 | MS.gene81506 | 0.83569 | 1.45E-56 | -1.69E-46 |
MS.gene057550 | MS.gene82245 | 0.822019 | 2.96E-53 | -1.69E-46 |
MS.gene057550 | MS.gene84197 | 0.811817 | 5.79E-51 | -1.69E-46 |
MS.gene057550 | MS.gene87056 | 0.824367 | 8.39E-54 | -1.69E-46 |
MS.gene057550 | MS.gene87750 | 0.820097 | 8.21E-53 | -1.69E-46 |
MS.gene057550 | MS.gene91226 | 0.807601 | 4.67E-50 | -1.69E-46 |
MS.gene057550 | MS.gene92296 | 0.804021 | 2.64E-49 | -1.69E-46 |
MS.gene057550 | MS.gene92886 | 0.802537 | 5.35E-49 | -1.69E-46 |
MS.gene057550 | MS.gene95132 | 0.809433 | 1.90E-50 | -1.69E-46 |
MS.gene057550 | MS.gene96299 | 0.801028 | 1.09E-48 | -1.69E-46 |
MS.gene057550 | MS.gene96947 | 0.81675 | 4.71E-52 | -1.69E-46 |
MS.gene057550 | MS.gene96948 | 0.803835 | 2.88E-49 | -1.69E-46 |
MS.gene057550 | MS.gene97125 | 0.867203 | 1.63E-65 | -1.69E-46 |
MS.gene057550 | MS.gene97499 | 0.825528 | 4.46E-54 | -1.69E-46 |
MS.gene057550 | MS.gene97602 | 0.960113 | 3.42E-118 | -1.69E-46 |
MS.gene057550 | MS.gene98322 | 0.815672 | 8.20E-52 | -1.69E-46 |
MS.gene057550 | MS.gene98480 | 0.809524 | 1.81E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057550.t1 | MTR_7g011990 | 85.479 | 365 | 53 | 0 | 2 | 366 | 3 | 367 | 0.0 | 662 |
MS.gene057550.t1 | MTR_7g011900 | 78.108 | 370 | 74 | 3 | 2 | 366 | 3 | 370 | 0.0 | 600 |
MS.gene057550.t1 | MTR_7g012040 | 73.784 | 370 | 91 | 2 | 1 | 366 | 1 | 368 | 0.0 | 570 |
MS.gene057550.t1 | MTR_7g012020 | 72.162 | 370 | 98 | 2 | 1 | 366 | 1 | 369 | 0.0 | 567 |
MS.gene057550.t1 | MTR_7g012090 | 69.251 | 374 | 105 | 3 | 2 | 366 | 3 | 375 | 0.0 | 531 |
MS.gene057550.t1 | MTR_7g012070 | 67.647 | 374 | 111 | 3 | 2 | 366 | 3 | 375 | 0.0 | 526 |
MS.gene057550.t1 | MTR_2g055940 | 68.000 | 350 | 108 | 2 | 20 | 366 | 15 | 363 | 2.65e-180 | 504 |
MS.gene057550.t1 | MTR_1g096310 | 62.125 | 367 | 130 | 3 | 7 | 366 | 8 | 372 | 4.32e-172 | 484 |
MS.gene057550.t1 | MTR_7g012020 | 74.275 | 276 | 66 | 2 | 1 | 272 | 1 | 275 | 1.81e-153 | 434 |
MS.gene057550.t1 | MTR_7g012020 | 75.099 | 253 | 58 | 2 | 1 | 249 | 1 | 252 | 2.10e-140 | 399 |
MS.gene057550.t1 | MTR_1g036460 | 49.330 | 373 | 176 | 6 | 3 | 366 | 2 | 370 | 2.30e-128 | 373 |
MS.gene057550.t1 | MTR_1g036490 | 47.989 | 373 | 181 | 6 | 3 | 366 | 2 | 370 | 2.37e-126 | 368 |
MS.gene057550.t1 | MTR_3g021440 | 52.408 | 353 | 158 | 6 | 20 | 366 | 22 | 370 | 2.48e-121 | 355 |
MS.gene057550.t1 | MTR_3g021430 | 51.247 | 361 | 166 | 6 | 12 | 366 | 1 | 357 | 1.23e-120 | 353 |
MS.gene057550.t1 | MTR_1g036510 | 48.267 | 375 | 179 | 7 | 1 | 366 | 16 | 384 | 2.11e-118 | 348 |
MS.gene057550.t1 | MTR_3g092900 | 45.604 | 364 | 187 | 7 | 8 | 366 | 6 | 363 | 3.05e-106 | 317 |
MS.gene057550.t1 | MTR_5g098170 | 40.782 | 358 | 197 | 8 | 18 | 366 | 12 | 363 | 1.19e-91 | 279 |
MS.gene057550.t1 | MTR_7g118300 | 40.274 | 365 | 208 | 7 | 7 | 366 | 16 | 375 | 1.98e-88 | 271 |
MS.gene057550.t1 | MTR_0591s0010 | 40.496 | 363 | 202 | 10 | 13 | 366 | 20 | 377 | 3.91e-87 | 268 |
MS.gene057550.t1 | MTR_7g118320 | 40.220 | 363 | 205 | 7 | 12 | 366 | 4 | 362 | 2.41e-84 | 260 |
MS.gene057550.t1 | MTR_8g068690 | 38.674 | 362 | 210 | 8 | 13 | 366 | 19 | 376 | 2.16e-81 | 253 |
MS.gene057550.t1 | MTR_1g050220 | 42.424 | 330 | 131 | 6 | 25 | 346 | 6 | 284 | 7.65e-81 | 249 |
MS.gene057550.t1 | MTR_8g068750 | 37.293 | 362 | 215 | 8 | 13 | 366 | 20 | 377 | 2.55e-80 | 250 |
MS.gene057550.t1 | MTR_1g036510 | 49.275 | 276 | 126 | 6 | 1 | 268 | 16 | 285 | 2.58e-80 | 248 |
MS.gene057550.t1 | MTR_8g068870 | 38.235 | 340 | 199 | 6 | 34 | 366 | 28 | 363 | 8.39e-77 | 241 |
MS.gene057550.t1 | MTR_8g024160 | 36.000 | 350 | 182 | 6 | 18 | 366 | 20 | 328 | 2.32e-70 | 223 |
MS.gene057550.t1 | MTR_8g068570 | 40.000 | 330 | 158 | 12 | 13 | 333 | 20 | 318 | 2.52e-69 | 220 |
MS.gene057550.t1 | MTR_1g036510 | 47.451 | 255 | 120 | 6 | 1 | 247 | 16 | 264 | 2.56e-68 | 216 |
MS.gene057550.t1 | MTR_6g060290 | 60.656 | 183 | 53 | 4 | 2 | 180 | 3 | 170 | 2.82e-68 | 213 |
MS.gene057550.t1 | MTR_6g078850 | 37.853 | 354 | 207 | 8 | 20 | 364 | 32 | 381 | 2.41e-67 | 221 |
MS.gene057550.t1 | MTR_2g072790 | 37.101 | 345 | 197 | 10 | 32 | 366 | 20 | 354 | 2.19e-61 | 201 |
MS.gene057550.t1 | MTR_3g096050 | 36.261 | 353 | 203 | 10 | 25 | 366 | 17 | 358 | 7.79e-58 | 192 |
MS.gene057550.t1 | MTR_8g068730 | 33.516 | 364 | 194 | 10 | 13 | 366 | 20 | 345 | 3.04e-57 | 190 |
MS.gene057550.t1 | MTR_8g068690 | 37.736 | 265 | 155 | 6 | 13 | 270 | 19 | 280 | 2.47e-54 | 181 |
MS.gene057550.t1 | MTR_3g096070 | 36.202 | 337 | 171 | 10 | 25 | 350 | 17 | 320 | 3.23e-53 | 179 |
MS.gene057550.t1 | MTR_0079s0070 | 35.385 | 325 | 185 | 11 | 40 | 352 | 10 | 321 | 6.14e-51 | 173 |
MS.gene057550.t1 | MTR_0017s0100 | 34.891 | 321 | 192 | 10 | 40 | 352 | 44 | 355 | 7.09e-51 | 174 |
MS.gene057550.t1 | MTR_4g038440 | 35.385 | 325 | 185 | 11 | 40 | 352 | 44 | 355 | 1.37e-50 | 173 |
MS.gene057550.t1 | MTR_3g083620 | 34.062 | 320 | 195 | 9 | 38 | 351 | 38 | 347 | 1.08e-49 | 171 |
MS.gene057550.t1 | MTR_8g068600 | 35.547 | 256 | 148 | 6 | 45 | 286 | 27 | 279 | 6.82e-46 | 158 |
MS.gene057550.t1 | MTR_1g076940 | 30.625 | 320 | 209 | 6 | 40 | 351 | 33 | 347 | 8.25e-44 | 155 |
MS.gene057550.t1 | MTR_5g074600 | 30.201 | 298 | 193 | 7 | 64 | 352 | 55 | 346 | 2.63e-43 | 154 |
MS.gene057550.t1 | MTR_3g096050 | 39.130 | 253 | 135 | 8 | 25 | 268 | 17 | 259 | 3.03e-42 | 148 |
MS.gene057550.t1 | MTR_8g068740 | 31.408 | 277 | 148 | 7 | 13 | 282 | 20 | 261 | 1.29e-39 | 142 |
MS.gene057550.t1 | MTR_7g014570 | 29.245 | 318 | 207 | 6 | 40 | 351 | 33 | 338 | 1.81e-39 | 143 |
MS.gene057550.t1 | MTR_4g033015 | 32.344 | 337 | 202 | 9 | 39 | 359 | 32 | 358 | 2.48e-39 | 143 |
MS.gene057550.t1 | MTR_5g074680 | 29.293 | 297 | 199 | 6 | 61 | 352 | 57 | 347 | 4.21e-39 | 143 |
MS.gene057550.t1 | MTR_5g074580 | 31.183 | 279 | 182 | 5 | 79 | 352 | 74 | 347 | 7.00e-39 | 142 |
MS.gene057550.t1 | MTR_4g033200 | 32.047 | 337 | 203 | 9 | 39 | 359 | 32 | 358 | 2.53e-38 | 140 |
MS.gene057550.t1 | MTR_4g088340 | 28.274 | 336 | 219 | 7 | 37 | 364 | 7 | 328 | 2.97e-38 | 140 |
MS.gene057550.t1 | MTR_7g024520 | 30.634 | 284 | 165 | 9 | 80 | 351 | 73 | 336 | 5.36e-38 | 139 |
MS.gene057550.t1 | MTR_4g088345 | 28.902 | 346 | 204 | 10 | 37 | 364 | 30 | 351 | 7.31e-38 | 139 |
MS.gene057550.t1 | MTR_4g079160 | 30.872 | 298 | 190 | 8 | 61 | 352 | 55 | 342 | 8.03e-38 | 139 |
MS.gene057550.t1 | MTR_4g088200 | 30.699 | 329 | 213 | 8 | 33 | 352 | 26 | 348 | 9.45e-38 | 139 |
MS.gene057550.t1 | MTR_7g024500 | 30.769 | 273 | 169 | 8 | 80 | 346 | 73 | 331 | 1.47e-37 | 138 |
MS.gene057550.t1 | MTR_7g014510 | 28.621 | 290 | 196 | 5 | 65 | 351 | 62 | 343 | 2.53e-37 | 138 |
MS.gene057550.t1 | MTR_5g074540 | 33.333 | 228 | 147 | 3 | 136 | 358 | 107 | 334 | 2.31e-36 | 135 |
MS.gene057550.t1 | MTR_4g033150 | 30.564 | 337 | 208 | 9 | 39 | 359 | 32 | 358 | 7.22e-36 | 134 |
MS.gene057550.t1 | MTR_8g068620 | 49.091 | 110 | 56 | 0 | 160 | 269 | 2 | 111 | 3.97e-34 | 122 |
MS.gene057550.t1 | MTR_4g088190 | 31.250 | 336 | 205 | 8 | 33 | 352 | 26 | 351 | 1.80e-32 | 125 |
MS.gene057550.t1 | MTR_5g074610 | 36.774 | 155 | 95 | 1 | 201 | 352 | 159 | 313 | 3.80e-30 | 118 |
MS.gene057550.t1 | MTR_1g076930 | 30.417 | 240 | 150 | 7 | 37 | 268 | 7 | 237 | 2.84e-28 | 110 |
MS.gene057550.t1 | MTR_4g033170 | 27.660 | 329 | 220 | 8 | 40 | 359 | 33 | 352 | 3.46e-27 | 110 |
MS.gene057550.t1 | MTR_4g038440 | 32.773 | 238 | 140 | 8 | 40 | 268 | 44 | 270 | 1.11e-26 | 107 |
MS.gene057550.t1 | MTR_4g033085 | 27.356 | 329 | 221 | 8 | 40 | 359 | 33 | 352 | 2.24e-25 | 105 |
MS.gene057550.t1 | MTR_6g060280 | 66.667 | 63 | 15 | 2 | 220 | 277 | 1 | 62 | 1.52e-19 | 82.4 |
MS.gene057550.t1 | MTR_0794s0020 | 29.075 | 227 | 139 | 7 | 39 | 253 | 32 | 248 | 5.60e-19 | 85.5 |
MS.gene057550.t1 | MTR_8g068760 | 41.000 | 100 | 57 | 2 | 268 | 366 | 135 | 233 | 4.49e-18 | 82.8 |
MS.gene057550.t1 | MTR_8g068580 | 45.161 | 93 | 47 | 4 | 276 | 366 | 43 | 133 | 8.99e-15 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057550.t1 | AT5G54160 | 48.000 | 350 | 175 | 5 | 20 | 366 | 16 | 361 | 3.42e-109 | 324 |
MS.gene057550.t1 | AT1G77520 | 40.282 | 355 | 197 | 9 | 24 | 366 | 30 | 381 | 1.63e-83 | 259 |
MS.gene057550.t1 | AT1G33030 | 41.040 | 346 | 193 | 8 | 27 | 366 | 10 | 350 | 1.71e-81 | 253 |
MS.gene057550.t1 | AT1G51990 | 37.681 | 345 | 206 | 3 | 20 | 357 | 12 | 354 | 2.18e-81 | 253 |
MS.gene057550.t1 | AT1G51990 | 37.391 | 345 | 207 | 3 | 20 | 357 | 12 | 354 | 2.72e-80 | 250 |
MS.gene057550.t1 | AT1G63140 | 41.160 | 362 | 192 | 13 | 20 | 366 | 26 | 381 | 1.67e-73 | 233 |
MS.gene057550.t1 | AT1G63140 | 41.160 | 362 | 192 | 13 | 20 | 366 | 46 | 401 | 1.96e-73 | 233 |
MS.gene057550.t1 | AT1G21100 | 40.395 | 354 | 194 | 7 | 16 | 356 | 15 | 364 | 7.75e-73 | 231 |
MS.gene057550.t1 | AT1G21130 | 40.169 | 356 | 196 | 7 | 14 | 356 | 13 | 364 | 5.78e-72 | 229 |
MS.gene057550.t1 | AT1G21110 | 40.113 | 354 | 195 | 7 | 16 | 356 | 15 | 364 | 2.92e-70 | 224 |
MS.gene057550.t1 | AT1G77530 | 38.592 | 355 | 203 | 9 | 24 | 366 | 30 | 381 | 3.22e-69 | 222 |
MS.gene057550.t1 | AT1G21120 | 39.548 | 354 | 197 | 7 | 16 | 356 | 15 | 364 | 7.71e-69 | 221 |
MS.gene057550.t1 | AT1G21120 | 39.548 | 354 | 197 | 7 | 16 | 356 | 63 | 412 | 2.69e-68 | 221 |
MS.gene057550.t1 | AT5G53810 | 38.012 | 342 | 198 | 7 | 37 | 366 | 39 | 378 | 6.65e-68 | 219 |
MS.gene057550.t1 | AT1G76790 | 39.459 | 370 | 194 | 11 | 17 | 366 | 6 | 365 | 3.25e-66 | 214 |
MS.gene057550.t1 | AT3G53140 | 35.328 | 351 | 200 | 9 | 12 | 346 | 1 | 340 | 3.04e-59 | 196 |
MS.gene057550.t1 | AT1G62900 | 46.798 | 203 | 105 | 3 | 166 | 366 | 4 | 205 | 9.89e-58 | 187 |
MS.gene057550.t1 | AT1G33030 | 40.400 | 250 | 140 | 6 | 27 | 271 | 10 | 255 | 1.54e-53 | 178 |
MS.gene057550.t1 | AT5G37170 | 35.000 | 320 | 165 | 9 | 56 | 366 | 49 | 334 | 3.86e-53 | 179 |
MS.gene057550.t1 | AT1G33030 | 40.486 | 247 | 138 | 6 | 27 | 268 | 10 | 252 | 2.37e-52 | 175 |
MS.gene057550.t1 | AT5G37170 | 42.929 | 198 | 109 | 4 | 172 | 366 | 38 | 234 | 3.08e-51 | 171 |
MS.gene057550.t1 | AT5G37170 | 43.316 | 187 | 102 | 4 | 183 | 366 | 1 | 186 | 1.58e-48 | 162 |
MS.gene057550.t1 | AT1G21130 | 40.226 | 266 | 144 | 5 | 14 | 268 | 13 | 274 | 4.81e-45 | 157 |
MS.gene057550.t1 | AT1G63140 | 39.695 | 262 | 140 | 10 | 20 | 268 | 46 | 302 | 1.42e-42 | 150 |
MS.gene057550.t1 | AT4G35160 | 31.307 | 329 | 206 | 9 | 38 | 351 | 44 | 367 | 8.46e-38 | 140 |
MS.gene057550.t1 | AT4G35150 | 33.197 | 244 | 145 | 6 | 125 | 351 | 68 | 310 | 3.41e-37 | 137 |
MS.gene057550.t1 | AT1G77530 | 36.441 | 236 | 138 | 6 | 24 | 249 | 30 | 263 | 3.78e-33 | 124 |
MS.gene057550.t1 | AT1G63140 | 37.975 | 237 | 129 | 10 | 20 | 243 | 46 | 277 | 1.53e-31 | 120 |
Find 69 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAATATAGGATTAACTTTA+AGG | 0.132063 | 7.2:+85371111 | MS.gene057550:intron |
CTTGATGCATTTGTTGCTTC+TGG | 0.183069 | 7.2:-85371866 | None:intergenic |
TCATTGATTTGTTGAATAAT+TGG | 0.195679 | 7.2:-85371222 | None:intergenic |
CACAAAGCTTTGCCTCAAAA+TGG | 0.243448 | 7.2:+85371806 | MS.gene057550:CDS |
TGCAAAATATCCATCAATTA+AGG | 0.257882 | 7.2:+85371360 | MS.gene057550:CDS |
GAGGGTTTGGCTCAACGTTC+TGG | 0.284352 | 7.2:+85371959 | MS.gene057550:CDS |
CTCAACTTGTTTGAAATCAT+TGG | 0.292345 | 7.2:+85368161 | MS.gene057550:CDS |
ATGTGTCATCCTGCTTTGAT+AGG | 0.301521 | 7.2:+85368422 | MS.gene057550:CDS |
AAGTTGATTGCCTTAATTGA+TGG | 0.303709 | 7.2:-85371370 | None:intergenic |
ACACTCTCAGCTATGGTATT+AGG | 0.313041 | 7.2:+85368095 | MS.gene057550:CDS |
GGTAGCATAATGAGTGTTTA+TGG | 0.313050 | 7.2:+85368323 | MS.gene057550:CDS |
CATATCCTTTGTATATTTCA+AGG | 0.318611 | 7.2:-85371276 | None:intergenic |
TCTTGTGGCACATGTACTAT+TGG | 0.327244 | 7.2:+85371838 | MS.gene057550:CDS |
TAACCCAACCTTAAGCATTA+TGG | 0.341590 | 7.2:-85371603 | None:intergenic |
AACTGCAGGAAACACTAAAT+TGG | 0.344342 | 7.2:-85368120 | None:intergenic |
TCTAGGCTGTATGTCATAAT+TGG | 0.348606 | 7.2:+85371747 | MS.gene057550:intron |
AACATACGATCTAGCCGATT+TGG | 0.374943 | 7.2:-85368245 | None:intergenic |
AATAGTGATCATGGTTATCT+TGG | 0.384090 | 7.2:+85368383 | MS.gene057550:CDS |
GTTGATGTTGGAGGTGGAAA+TGG | 0.399088 | 7.2:+85371316 | MS.gene057550:CDS |
GTCTCAAGTTTGGTTGATGT+TGG | 0.402367 | 7.2:+85371304 | MS.gene057550:CDS |
TGCAAAAGAATATGAGGGTT+TGG | 0.403630 | 7.2:+85371946 | MS.gene057550:CDS |
AACACTCTGATTTGCCAAAT+CGG | 0.406765 | 7.2:+85368231 | MS.gene057550:CDS |
AAGAACTGCAAAAGAATATG+AGG | 0.417966 | 7.2:+85371940 | MS.gene057550:CDS |
AAAGAACAATATACCTGGAA+TGG | 0.419990 | 7.2:-85371425 | None:intergenic |
GTTTATGGGATCACACCTTC+TGG | 0.427376 | 7.2:+85368338 | MS.gene057550:CDS |
TGTTGTGCTTTCTCTACCAT+TGG | 0.428568 | 7.2:+85372004 | MS.gene057550:CDS |
GAAAATGCACCACCCATTCC+AGG | 0.430355 | 7.2:+85371412 | MS.gene057550:CDS |
TATCACTATCATCTATTTGT+GGG | 0.435409 | 7.2:-85368073 | None:intergenic |
TGAAATATACAAAGGATATG+AGG | 0.436772 | 7.2:+85371279 | MS.gene057550:CDS |
CTCTTCTGTCTATTTCTACT+CGG | 0.445033 | 7.2:+85368288 | MS.gene057550:CDS |
AGGAGATGCCATAATGCTTA+AGG | 0.462667 | 7.2:+85371595 | MS.gene057550:CDS |
GTAGCATAATGAGTGTTTAT+GGG | 0.463088 | 7.2:+85368324 | MS.gene057550:CDS |
CATTATGCTACCATCATCAT+TGG | 0.464708 | 7.2:-85368312 | None:intergenic |
ATATGAGGGAGTCTCAAGTT+TGG | 0.471735 | 7.2:+85371294 | MS.gene057550:CDS |
GTATCACTATCATCTATTTG+TGG | 0.490917 | 7.2:-85368074 | None:intergenic |
TAAGGATGCAGTACTTGATC+CGG | 0.492794 | 7.2:+85371129 | MS.gene057550:CDS |
GGCAAATCAGAGTGTTGAGT+TGG | 0.494514 | 7.2:-85368224 | None:intergenic |
TATGATGAAAATAGTGATCA+TGG | 0.500039 | 7.2:+85368374 | MS.gene057550:CDS |
TTGAATAATTGGTTTACTTG+AGG | 0.500718 | 7.2:-85371211 | None:intergenic |
AAGAACAATATACCTGGAAT+GGG | 0.505289 | 7.2:-85371424 | None:intergenic |
AATATCTAAGTACGAGTACA+TGG | 0.507809 | 7.2:+85371180 | MS.gene057550:CDS |
TCAAGTTTGGTTGATGTTGG+AGG | 0.510442 | 7.2:+85371307 | MS.gene057550:CDS |
TGTGTCATCCTGCTTTGATA+GGG | 0.514622 | 7.2:+85368423 | MS.gene057550:CDS |
TTGTTTGAAATCATTGGTGA+TGG | 0.517050 | 7.2:+85368167 | MS.gene057550:CDS |
ATCCTGCTTTGATAGGGTTG+TGG | 0.524365 | 7.2:+85368429 | MS.gene057550:CDS |
CATTTAGGGATTGAGCATGT+TGG | 0.530865 | 7.2:+85371545 | MS.gene057550:intron |
ATTGCAGCATTAAGAACTGC+AGG | 0.535869 | 7.2:-85368134 | None:intergenic |
ATCATGTTCATTAATGCTGG+TGG | 0.543605 | 7.2:+85371911 | MS.gene057550:CDS |
AGCATTATGGCATCTCCTTG+TGG | 0.554368 | 7.2:-85371590 | None:intergenic |
AATATCATGTTCATTAATGC+TGG | 0.556116 | 7.2:+85371908 | MS.gene057550:CDS |
AGTTTGGTTGATGTTGGAGG+TGG | 0.559529 | 7.2:+85371310 | MS.gene057550:CDS |
GAAATATACAAAGGATATGA+GGG | 0.561483 | 7.2:+85371280 | MS.gene057550:CDS |
TTTCTCTACCATTGGAGTGA+TGG | 0.564359 | 7.2:+85372012 | MS.gene057550:CDS |
ATGAAGTTCCATCACTCCAA+TGG | 0.569789 | 7.2:-85372020 | None:intergenic |
TTAGGGATTGAGCATGTTGG+AGG | 0.570708 | 7.2:+85371548 | MS.gene057550:intron |
TACCACAACCCTATCAAAGC+AGG | 0.575416 | 7.2:-85368431 | None:intergenic |
TAGTGATACACTCTCAGCTA+TGG | 0.578762 | 7.2:+85368088 | MS.gene057550:CDS |
AACAATATACCTGGAATGGG+TGG | 0.581952 | 7.2:-85371421 | None:intergenic |
TCTACTCGGACCAATGATGA+TGG | 0.584557 | 7.2:+85368302 | MS.gene057550:CDS |
ATCACTATCATCTATTTGTG+GGG | 0.595648 | 7.2:-85368072 | None:intergenic |
AAATGGAAAGGTCATTCTTG+TGG | 0.596549 | 7.2:+85371823 | MS.gene057550:CDS |
TAAGTACGAGTACATGGGAA+AGG | 0.606162 | 7.2:+85371186 | MS.gene057550:CDS |
AGCTTTGCCTCAAAATGGAA+AGG | 0.610192 | 7.2:+85371811 | MS.gene057550:CDS |
GGATGCAGTACTTGATCCGG+AGG | 0.613278 | 7.2:+85371132 | MS.gene057550:CDS |
AGAATCCTTGAAATATACAA+AGG | 0.621043 | 7.2:+85371271 | MS.gene057550:CDS |
AGAACTGCAAAAGAATATGA+GGG | 0.643665 | 7.2:+85371941 | MS.gene057550:CDS |
ATATCTAAGTACGAGTACAT+GGG | 0.670164 | 7.2:+85371181 | MS.gene057550:CDS |
GGGTGTGAGATTCAATCACA+TGG | 0.675697 | 7.2:-85368052 | None:intergenic |
ATGTTTGAAAACATTCCACA+AGG | 0.693962 | 7.2:+85371575 | MS.gene057550:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTGTAAAATTTCATTT+AGG | + | chr7.2:85371530-85371549 | MS.gene057550:intron | 10.0% |
!! | AAATTGTAAAATTTCATTTA+GGG | + | chr7.2:85371531-85371550 | MS.gene057550:intron | 10.0% |
!! | ATAGAAACTATTAAATTTAA+AGG | + | chr7.2:85370415-85370434 | MS.gene057550:intron | 10.0% |
!!! | AAAATTTTAATTATTAAGCA+AGG | - | chr7.2:85368467-85368486 | None:intergenic | 10.0% |
!!! | AATGCTAAAATAATATTTTA+AGG | - | chr7.2:85369649-85369668 | None:intergenic | 10.0% |
!!! | ATTTGTTAATTTATTTTAAG+AGG | + | chr7.2:85369751-85369770 | MS.gene057550:intron | 10.0% |
!! | AATTAGGATTTGTATTATAT+CGG | - | chr7.2:85368787-85368806 | None:intergenic | 15.0% |
!! | AGTTTAAATAATTATTGAAG+TGG | - | chr7.2:85371491-85371510 | None:intergenic | 15.0% |
!! | ATCAGTTATATGATAAATAT+AGG | + | chr7.2:85371098-85371117 | MS.gene057550:intron | 15.0% |
!! | CTAAAAAAAATACTTGATTA+TGG | + | chr7.2:85370931-85370950 | MS.gene057550:intron | 15.0% |
!! | GACTTATTCAAAAAAATTAA+TGG | + | chr7.2:85371157-85371176 | MS.gene057550:CDS | 15.0% |
!! | TAAATATAGGATTAACTTTA+AGG | + | chr7.2:85371111-85371130 | MS.gene057550:intron | 15.0% |
!! | TATAAAAAAATAAGTAGTCT+TGG | + | chr7.2:85370639-85370658 | MS.gene057550:intron | 15.0% |
!! | TATACAATAAATATACATTG+AGG | - | chr7.2:85371068-85371087 | None:intergenic | 15.0% |
!!! | AAAATTTTCCATTTATATGT+AGG | + | chr7.2:85368479-85368498 | MS.gene057550:intron | 15.0% |
!!! | ATCATATAACTGATAATTTT+AGG | - | chr7.2:85371092-85371111 | None:intergenic | 15.0% |
!!! | TAATTAAATTTGTTGTTTGT+TGG | + | chr7.2:85370873-85370892 | MS.gene057550:intron | 15.0% |
!!! | TTTCTTTAAGAAAAACATAA+TGG | - | chr7.2:85368523-85368542 | None:intergenic | 15.0% |
!! | AACTATTAAATTTAAAGGCA+CGG | + | chr7.2:85370420-85370439 | MS.gene057550:intron | 20.0% |
!! | AAGAAGAAGGAAAAAAAAAT+GGG | + | chr7.2:85369239-85369258 | MS.gene057550:intron | 20.0% |
!! | AATACATATAATGGCTTATT+TGG | + | chr7.2:85368602-85368621 | MS.gene057550:intron | 20.0% |
!! | AATAGTGAGAGTTATTTATA+GGG | + | chr7.2:85369916-85369935 | MS.gene057550:intron | 20.0% |
!! | ACTTATTTAATTAGGATAGA+AGG | + | chr7.2:85369154-85369173 | MS.gene057550:intron | 20.0% |
!! | AGTTAATTATATCTTAATCG+TGG | - | chr7.2:85370993-85371012 | None:intergenic | 20.0% |
!! | ATACATATAATGGCTTATTT+GGG | + | chr7.2:85368603-85368622 | MS.gene057550:intron | 20.0% |
!! | CTAATTCAATATGAATTACA+AGG | - | chr7.2:85369871-85369890 | None:intergenic | 20.0% |
!! | GTGAAATCACTTATTTAATT+AGG | + | chr7.2:85369146-85369165 | MS.gene057550:intron | 20.0% |
!! | TAACAAAAATATTTACCAGA+AGG | - | chr7.2:85368356-85368375 | None:intergenic | 20.0% |
!! | TTCTTTACAAGAATATAGTT+TGG | + | chr7.2:85369669-85369688 | MS.gene057550:intron | 20.0% |
!!! | ATTTTAAAGAACAATATACC+TGG | - | chr7.2:85371433-85371452 | None:intergenic | 20.0% |
!!! | TCATTGATTTGTTGAATAAT+TGG | - | chr7.2:85371225-85371244 | None:intergenic | 20.0% |
! | AAGAAACTATCACAAAAGAT+AGG | + | chr7.2:85369780-85369799 | MS.gene057550:intron | 25.0% |
! | AATATCATGTTCATTAATGC+TGG | + | chr7.2:85371908-85371927 | MS.gene057550:CDS | 25.0% |
! | AGAATCCTTGAAATATACAA+AGG | + | chr7.2:85371271-85371290 | MS.gene057550:CDS | 25.0% |
! | AGTATATGTAGATTGATCAT+GGG | + | chr7.2:85369310-85369329 | MS.gene057550:intron | 25.0% |
! | CAATAGTGAGAGTTATTTAT+AGG | + | chr7.2:85369915-85369934 | MS.gene057550:intron | 25.0% |
! | CATAATATATGCAATATCCA+GGG | - | chr7.2:85368672-85368691 | None:intergenic | 25.0% |
! | CATATCCTTTGTATATTTCA+AGG | - | chr7.2:85371279-85371298 | None:intergenic | 25.0% |
! | CTAATTCGCTAAAAACAAAA+AGG | + | chr7.2:85368801-85368820 | MS.gene057550:intron | 25.0% |
! | GAAACAAACATGAAACTTAA+AGG | - | chr7.2:85370021-85370040 | None:intergenic | 25.0% |
! | GAAATAAACGTGAAACTTAA+AGG | + | chr7.2:85370332-85370351 | MS.gene057550:intron | 25.0% |
! | GAAATATACAAAGGATATGA+GGG | + | chr7.2:85371280-85371299 | MS.gene057550:CDS | 25.0% |
! | GAAGAAGAAGGAAAAAAAAA+TGG | + | chr7.2:85369238-85369257 | MS.gene057550:intron | 25.0% |
! | GTCATATTAGTCATATTTGT+AGG | - | chr7.2:85368889-85368908 | None:intergenic | 25.0% |
! | TAGTCATTCCTACATATAAA+TGG | - | chr7.2:85368490-85368509 | None:intergenic | 25.0% |
! | TATCACTATCATCTATTTGT+GGG | - | chr7.2:85368076-85368095 | None:intergenic | 25.0% |
! | TATGATGAAAATAGTGATCA+TGG | + | chr7.2:85368374-85368393 | MS.gene057550:CDS | 25.0% |
! | TGAAATATACAAAGGATATG+AGG | + | chr7.2:85371279-85371298 | MS.gene057550:CDS | 25.0% |
! | TGCAAAATATCCATCAATTA+AGG | + | chr7.2:85371360-85371379 | MS.gene057550:CDS | 25.0% |
! | TTTATATGTAGGAATGACTA+CGG | + | chr7.2:85368490-85368509 | MS.gene057550:intron | 25.0% |
!! | ATAGATCAACTTTAGCTTAA+CGG | - | chr7.2:85370187-85370206 | None:intergenic | 25.0% |
!! | ATAGGTTCTTTAAGTTTCTA+AGG | - | chr7.2:85370310-85370329 | None:intergenic | 25.0% |
!! | CATATTTCTTTTCGACTTTA+AGG | - | chr7.2:85369412-85369431 | None:intergenic | 25.0% |
!! | GATTCTTTTCATGTGAATTT+TGG | - | chr7.2:85371257-85371276 | None:intergenic | 25.0% |
!! | TTGAATAATTGGTTTACTTG+AGG | - | chr7.2:85371214-85371233 | None:intergenic | 25.0% |
!!! | AACAACTTTTTGAAAAACAC+TGG | + | chr7.2:85368567-85368586 | MS.gene057550:intron | 25.0% |
!!! | AAGTTTCTAAAGTTTCAGAT+AGG | + | chr7.2:85370054-85370073 | MS.gene057550:intron | 25.0% |
!!! | ATCATTATTTTGACAAGTCT+TGG | - | chr7.2:85369577-85369596 | None:intergenic | 25.0% |
!!! | CTTTTTGTTTTTAGCGAATT+AGG | - | chr7.2:85368803-85368822 | None:intergenic | 25.0% |
!!! | GAAATCGCTTTTATTTTTTG+TGG | + | chr7.2:85368631-85368650 | MS.gene057550:intron | 25.0% |
!!! | GCTGTTTTATGTTATTAACA+TGG | - | chr7.2:85368854-85368873 | None:intergenic | 25.0% |
!!! | GTTTCGTTTCTTTTTTTTTG+TGG | + | chr7.2:85370737-85370756 | MS.gene057550:intron | 25.0% |
!!! | TTTAAGTTTCGAGTTTGTTT+CGG | + | chr7.2:85370080-85370099 | MS.gene057550:intron | 25.0% |
!!! | TTTAAGTTTCGAGTTTGTTT+CGG | - | chr7.2:85370099-85370080 | None:intergenic | 25.0% |
!!! | TTTTTTGTGAAATTTTCCGA+TGG | + | chr7.2:85370707-85370726 | MS.gene057550:intron | 25.0% |
AAAGAACAATATACCTGGAA+TGG | - | chr7.2:85371428-85371447 | None:intergenic | 30.0% | |
AAGAACAATATACCTGGAAT+GGG | - | chr7.2:85371427-85371446 | None:intergenic | 30.0% | |
AAGAACTGCAAAAGAATATG+AGG | + | chr7.2:85371940-85371959 | MS.gene057550:CDS | 30.0% | |
AATAGTGATCATGGTTATCT+TGG | + | chr7.2:85368383-85368402 | MS.gene057550:CDS | 30.0% | |
AATATCTAAGTACGAGTACA+TGG | + | chr7.2:85371180-85371199 | MS.gene057550:CDS | 30.0% | |
AGAACTGCAAAAGAATATGA+GGG | + | chr7.2:85371941-85371960 | MS.gene057550:CDS | 30.0% | |
AGTCAACAAGTCAAAATTCT+TGG | + | chr7.2:85370611-85370630 | MS.gene057550:intron | 30.0% | |
ATATCTAAGTACGAGTACAT+GGG | + | chr7.2:85371181-85371200 | MS.gene057550:CDS | 30.0% | |
ATCACTATCATCTATTTGTG+GGG | - | chr7.2:85368075-85368094 | None:intergenic | 30.0% | |
ATGAAGTTCATATGAGAAGT+AGG | + | chr7.2:85369818-85369837 | MS.gene057550:intron | 30.0% | |
ATGTTTGAAAACATTCCACA+AGG | + | chr7.2:85371575-85371594 | MS.gene057550:CDS | 30.0% | |
ATTTGGTCAGATGTAAACTA+TGG | - | chr7.2:85369986-85370005 | None:intergenic | 30.0% | |
CATAGTTAGTTCAGATGTAA+AGG | - | chr7.2:85370376-85370395 | None:intergenic | 30.0% | |
CTGAAACCTTAGAAACTTAA+AGG | + | chr7.2:85370241-85370260 | MS.gene057550:intron | 30.0% | |
GAAACAAACTCGAAACTTAA+AGG | + | chr7.2:85370272-85370291 | MS.gene057550:intron | 30.0% | |
GAAACAAACTCGAAACTTAA+AGG | - | chr7.2:85370291-85370272 | None:intergenic | 30.0% | |
GAAACAAACTTGACACTTAA+AGG | - | chr7.2:85370141-85370160 | None:intergenic | 30.0% | |
GAGTATATGTAGATTGATCA+TGG | + | chr7.2:85369309-85369328 | MS.gene057550:intron | 30.0% | |
GCATAATATATGCAATATCC+AGG | - | chr7.2:85368673-85368692 | None:intergenic | 30.0% | |
GTAGCATAATGAGTGTTTAT+GGG | + | chr7.2:85368324-85368343 | MS.gene057550:CDS | 30.0% | |
GTATATGTAGATTGATCATG+GGG | + | chr7.2:85369311-85369330 | MS.gene057550:intron | 30.0% | |
GTATCACTATCATCTATTTG+TGG | - | chr7.2:85368077-85368096 | None:intergenic | 30.0% | |
GTTTCACGTTTATTTCAGAT+AGG | - | chr7.2:85370328-85370347 | None:intergenic | 30.0% | |
TAAAGGCCAAATACATCTTT+GGG | - | chr7.2:85370359-85370378 | None:intergenic | 30.0% | |
TATGACTATATTCAAGTCTC+CGG | + | chr7.2:85368903-85368922 | MS.gene057550:intron | 30.0% | |
TTCTTGATGTAGTTCCAAAT+TGG | + | chr7.2:85370573-85370592 | MS.gene057550:intron | 30.0% | |
TTGGAAATCAAGGATGATAA+TGG | + | chr7.2:85370892-85370911 | MS.gene057550:intron | 30.0% | |
! | AAAAAGTCTTTATGATGACG+CGG | - | chr7.2:85370692-85370711 | None:intergenic | 30.0% |
! | AAGTTGATTGCCTTAATTGA+TGG | - | chr7.2:85371373-85371392 | None:intergenic | 30.0% |
! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr7.2:85370250-85370269 | None:intergenic | 30.0% |
! | CTATGGTTAGTTGTTTGATT+AGG | - | chr7.2:85369969-85369988 | None:intergenic | 30.0% |
! | CTCAACTTGTTTGAAATCAT+TGG | + | chr7.2:85368161-85368180 | MS.gene057550:CDS | 30.0% |
! | TTGTTTGAAATCATTGGTGA+TGG | + | chr7.2:85368167-85368186 | MS.gene057550:CDS | 30.0% |
! | TTTTTGAATAAGTCAACCTC+CGG | - | chr7.2:85371151-85371170 | None:intergenic | 30.0% |
!! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr7.2:85370239-85370258 | None:intergenic | 30.0% |
!! | TTGTTGTTTGTTGGAAATCA+AGG | + | chr7.2:85370882-85370901 | MS.gene057550:intron | 30.0% |
!!! | TCCATCTTTTTCAATGTTCT+AGG | + | chr7.2:85371730-85371749 | MS.gene057550:intron | 30.0% |
!!! | TCGTTTCTTTTTTTTTGTGG+TGG | + | chr7.2:85370740-85370759 | MS.gene057550:intron | 30.0% |
!!! | TTTATTTTTTGTGGTGTCCA+AGG | + | chr7.2:85368640-85368659 | MS.gene057550:intron | 30.0% |
AAAAAAAATGGGTGACAGCT+AGG | + | chr7.2:85369250-85369269 | MS.gene057550:intron | 35.0% | |
AAAAAAATGGGTGACAGCTA+GGG | + | chr7.2:85369251-85369270 | MS.gene057550:intron | 35.0% | |
AAACGAAACATGTATGCCAT+CGG | - | chr7.2:85370726-85370745 | None:intergenic | 35.0% | |
AAAGGACCCAAAGATGTATT+TGG | + | chr7.2:85370350-85370369 | MS.gene057550:intron | 35.0% | |
AAATAAACACCGCACTAAGA+CGG | + | chr7.2:85369023-85369042 | MS.gene057550:intron | 35.0% | |
AAATGGAAAGGTCATTCTTG+TGG | + | chr7.2:85371823-85371842 | MS.gene057550:CDS | 35.0% | |
AACATGAAACTTAAAGGACC+TGG | - | chr7.2:85370015-85370034 | None:intergenic | 35.0% | |
AACTGCAGGAAACACTAAAT+TGG | - | chr7.2:85368123-85368142 | None:intergenic | 35.0% | |
AAGCCAAACTCGAAACTTAA+AGG | + | chr7.2:85370212-85370231 | MS.gene057550:intron | 35.0% | |
ACATGAAACTTAAAGGACCT+GGG | - | chr7.2:85370014-85370033 | None:intergenic | 35.0% | |
AGAAACGAAACATGTATGTC+CGG | - | chr7.2:85370780-85370799 | None:intergenic | 35.0% | |
ATAGGTCCTTTAAGTGTCTA+AGG | + | chr7.2:85370103-85370122 | MS.gene057550:intron | 35.0% | |
ATCATGTTCATTAATGCTGG+TGG | + | chr7.2:85371911-85371930 | MS.gene057550:CDS | 35.0% | |
ATGCCATAATGCTTAAGGTT+GGG | + | chr7.2:85371600-85371619 | MS.gene057550:intron | 35.0% | |
ATTTGGTCCACTTGTCAAAT+TGG | - | chr7.2:85370535-85370554 | None:intergenic | 35.0% | |
CATTATGCTACCATCATCAT+TGG | - | chr7.2:85368315-85368334 | None:intergenic | 35.0% | |
CCAAAGTCATTGTCATTGAT+CGG | + | chr7.2:85368962-85368981 | MS.gene057550:intron | 35.0% | |
CTGAAACCTTAGACACTTAA+AGG | - | chr7.2:85370112-85370131 | None:intergenic | 35.0% | |
GATGTATTCTTGTACTCTTG+TGG | - | chr7.2:85370456-85370475 | None:intergenic | 35.0% | |
GCCTAGAACATTGAAAAAGA+TGG | - | chr7.2:85371734-85371753 | None:intergenic | 35.0% | |
GGATAGAAGGAAAAACAACT+CGG | + | chr7.2:85369167-85369186 | MS.gene057550:intron | 35.0% | |
GGTAGCATAATGAGTGTTTA+TGG | + | chr7.2:85368323-85368342 | MS.gene057550:CDS | 35.0% | |
GTAAAGGCCAAATACATCTT+TGG | - | chr7.2:85370360-85370379 | None:intergenic | 35.0% | |
TAACCCAACCTTAAGCATTA+TGG | - | chr7.2:85371606-85371625 | None:intergenic | 35.0% | |
TATTCTTGTACTCTTGTGGT+AGG | - | chr7.2:85370452-85370471 | None:intergenic | 35.0% | |
TCTAGGCTGTATGTCATAAT+TGG | + | chr7.2:85371747-85371766 | MS.gene057550:intron | 35.0% | |
TGATGTAGTTCCAAATTGGA+CGG | + | chr7.2:85370577-85370596 | MS.gene057550:intron | 35.0% | |
TGCAAAAGAATATGAGGGTT+TGG | + | chr7.2:85371946-85371965 | MS.gene057550:CDS | 35.0% | |
TTTGGTCCACTTGTCAAATT+GGG | - | chr7.2:85370534-85370553 | None:intergenic | 35.0% | |
! | AACACTCTGATTTGCCAAAT+CGG | + | chr7.2:85368231-85368250 | MS.gene057550:CDS | 35.0% |
! | AAGTGTCTAAGGTTTCAGAT+AGG | + | chr7.2:85370114-85370133 | MS.gene057550:intron | 35.0% |
! | AGAATGACCTTTCCATTTTG+AGG | - | chr7.2:85371821-85371840 | None:intergenic | 35.0% |
! | CATTCCCATTGTTTGGAATT+CGG | + | chr7.2:85369711-85369730 | MS.gene057550:intron | 35.0% |
! | CATTTTCAATCACTTGAGGA+AGG | - | chr7.2:85371399-85371418 | None:intergenic | 35.0% |
! | GTGTCAAGTTTGTTTCAGAT+AGG | + | chr7.2:85370145-85370164 | MS.gene057550:intron | 35.0% |
!! | AAGTTTCGAGTTTGGCTTAA+CGG | - | chr7.2:85370210-85370229 | None:intergenic | 35.0% |
!! | CTCTTCTGTCTATTTCTACT+CGG | + | chr7.2:85368288-85368307 | MS.gene057550:CDS | 35.0% |
!!! | TTCTTTTTTTTTGTGGTGGC+CGG | + | chr7.2:85370744-85370763 | MS.gene057550:intron | 35.0% |
AACAATATACCTGGAATGGG+TGG | - | chr7.2:85371424-85371443 | None:intergenic | 40.0% | |
AACATACGATCTAGCCGATT+TGG | - | chr7.2:85368248-85368267 | None:intergenic | 40.0% | |
AATAAACACCGCACTAAGAC+GGG | + | chr7.2:85369024-85369043 | MS.gene057550:intron | 40.0% | |
ACACTCTCAGCTATGGTATT+AGG | + | chr7.2:85368095-85368114 | MS.gene057550:CDS | 40.0% | |
ACCAACTGAGTTAAGATCGT+GGG | + | chr7.2:85368702-85368721 | MS.gene057550:intron | 40.0% | |
AGAAGAGAGATAGGAAGAAG+GGG | + | chr7.2:85369286-85369305 | MS.gene057550:intron | 40.0% | |
AGAAGGAAAAACAACTCGGA+GGG | + | chr7.2:85369171-85369190 | MS.gene057550:intron | 40.0% | |
AGAGAAGAGAGATAGGAAGA+AGG | + | chr7.2:85369284-85369303 | MS.gene057550:intron | 40.0% | |
AGCTTTGCCTCAAAATGGAA+AGG | + | chr7.2:85371811-85371830 | MS.gene057550:CDS | 40.0% | |
AGGAGATGCCATAATGCTTA+AGG | + | chr7.2:85371595-85371614 | MS.gene057550:CDS | 40.0% | |
ATATGAGAAGTAGGCATGAG+AGG | + | chr7.2:85369827-85369846 | MS.gene057550:intron | 40.0% | |
ATATGAGGGAGTCTCAAGTT+TGG | + | chr7.2:85371294-85371313 | MS.gene057550:CDS | 40.0% | |
ATCTTTGTTGCCGTCCAATT+TGG | - | chr7.2:85370590-85370609 | None:intergenic | 40.0% | |
ATGTAGGAATGACTACGGTT+CGG | + | chr7.2:85368495-85368514 | MS.gene057550:intron | 40.0% | |
ATGTGTCATCCTGCTTTGAT+AGG | + | chr7.2:85368422-85368441 | MS.gene057550:CDS | 40.0% | |
ATTGCAGCATTAAGAACTGC+AGG | - | chr7.2:85368137-85368156 | None:intergenic | 40.0% | |
CACAAAGCTTTGCCTCAAAA+TGG | + | chr7.2:85371806-85371825 | MS.gene057550:CDS | 40.0% | |
CATGAAACTTAAAGGACCTG+GGG | - | chr7.2:85370013-85370032 | None:intergenic | 40.0% | |
CATTTAGGGATTGAGCATGT+TGG | + | chr7.2:85371545-85371564 | MS.gene057550:intron | 40.0% | |
CCAAACAATGGGAATGTGAT+AGG | - | chr7.2:85369707-85369726 | None:intergenic | 40.0% | |
CCGATCAATGACAATGACTT+TGG | - | chr7.2:85368965-85368984 | None:intergenic | 40.0% | |
CCTATCACATTCCCATTGTT+TGG | + | chr7.2:85369704-85369723 | MS.gene057550:intron | 40.0% | |
GAGAAGAGAGATAGGAAGAA+GGG | + | chr7.2:85369285-85369304 | MS.gene057550:intron | 40.0% | |
GATGCCATAATGCTTAAGGT+TGG | + | chr7.2:85371599-85371618 | MS.gene057550:intron | 40.0% | |
GTGCGGTGTTTATTTGATTC+AGG | - | chr7.2:85369018-85369037 | None:intergenic | 40.0% | |
TAAGGATGCAGTACTTGATC+CGG | + | chr7.2:85371129-85371148 | MS.gene057550:CDS | 40.0% | |
TAAGTACGAGTACATGGGAA+AGG | + | chr7.2:85371186-85371205 | MS.gene057550:CDS | 40.0% | |
TACCAACTGAGTTAAGATCG+TGG | + | chr7.2:85368701-85368720 | MS.gene057550:intron | 40.0% | |
TAGAAGGAAAAACAACTCGG+AGG | + | chr7.2:85369170-85369189 | MS.gene057550:intron | 40.0% | |
TAGTGATACACTCTCAGCTA+TGG | + | chr7.2:85368088-85368107 | MS.gene057550:CDS | 40.0% | |
TCCTTCTTCTTCTTGTCAGA+GGG | - | chr7.2:85369230-85369249 | None:intergenic | 40.0% | |
TCTTGTGGCACATGTACTAT+TGG | + | chr7.2:85371838-85371857 | MS.gene057550:CDS | 40.0% | |
TGTGTCATCCTGCTTTGATA+GGG | + | chr7.2:85368423-85368442 | MS.gene057550:CDS | 40.0% | |
TTCCTTCTTCTTCTTGTCAG+AGG | - | chr7.2:85369231-85369250 | None:intergenic | 40.0% | |
TTGGTCCACTTGTCAAATTG+GGG | - | chr7.2:85370533-85370552 | None:intergenic | 40.0% | |
TTTGTTCTCACGTCTTTGTG+CGG | - | chr7.2:85369064-85369083 | None:intergenic | 40.0% | |
! | AATATCCAGGGTTCTAACCT+TGG | - | chr7.2:85368660-85368679 | None:intergenic | 40.0% |
! | CTTGATGCATTTGTTGCTTC+TGG | - | chr7.2:85371869-85371888 | None:intergenic | 40.0% |
! | GATCAACTTTAGCTTAACGG+AGG | - | chr7.2:85370184-85370203 | None:intergenic | 40.0% |
! | GGTGCATTTTCAATCACTTG+AGG | - | chr7.2:85371403-85371422 | None:intergenic | 40.0% |
! | GTCTCAAGTTTGGTTGATGT+TGG | + | chr7.2:85371304-85371323 | MS.gene057550:CDS | 40.0% |
! | TCAAGTTTGGTTGATGTTGG+AGG | + | chr7.2:85371307-85371326 | MS.gene057550:CDS | 40.0% |
! | TTTGATTTCCCGTCTTAGTG+CGG | - | chr7.2:85369035-85369054 | None:intergenic | 40.0% |
!! | AACTTGTGTCACTTGTGTCA+AGG | + | chr7.2:85369543-85369562 | MS.gene057550:intron | 40.0% |
!! | CTTAACGGAGGTTGATAGAA+AGG | - | chr7.2:85370172-85370191 | None:intergenic | 40.0% |
!! | GGTCCTTTAAGTTTCGAGTT+TGG | - | chr7.2:85370094-85370075 | None:intergenic | 40.0% |
!! | GTTTCGAGTTTGTTTCGGAT+AGG | + | chr7.2:85370085-85370104 | MS.gene057550:intron | 40.0% |
!! | GTTTCGAGTTTGTTTCGGAT+AGG | - | chr7.2:85370104-85370085 | None:intergenic | 40.0% |
!!! | TCTTTTTTTTTGTGGTGGCC+GGG | + | chr7.2:85370745-85370764 | MS.gene057550:intron | 40.0% |
AGCATTATGGCATCTCCTTG+TGG | - | chr7.2:85371593-85371612 | None:intergenic | 45.0% | |
ATCCTGCTTTGATAGGGTTG+TGG | + | chr7.2:85368429-85368448 | MS.gene057550:CDS | 45.0% | |
CCTTCTTCTTCTTGTCAGAG+GGG | - | chr7.2:85369229-85369248 | None:intergenic | 45.0% | |
GAAGAGAGATAGGAAGAAGG+GGG | + | chr7.2:85369287-85369306 | MS.gene057550:intron | 45.0% | |
GAAGGAAAAACAACTCGGAG+GGG | + | chr7.2:85369172-85369191 | MS.gene057550:intron | 45.0% | |
GAGAAGGAGAGAAGAGAGAT+AGG | + | chr7.2:85369277-85369296 | MS.gene057550:intron | 45.0% | |
GGCATGAGAGGTTGAAACAA+AGG | + | chr7.2:85369839-85369858 | MS.gene057550:intron | 45.0% | |
GGGTGTGAGATTCAATCACA+TGG | - | chr7.2:85368055-85368074 | None:intergenic | 45.0% | |
GTTGATGTTGGAGGTGGAAA+TGG | + | chr7.2:85371316-85371335 | MS.gene057550:CDS | 45.0% | |
GTTTATGGGATCACACCTTC+TGG | + | chr7.2:85368338-85368357 | MS.gene057550:CDS | 45.0% | |
TACCACAACCCTATCAAAGC+AGG | - | chr7.2:85368434-85368453 | None:intergenic | 45.0% | |
TCCACTTGTCAAATTGGGGT+AGG | - | chr7.2:85370529-85370548 | None:intergenic | 45.0% | |
TCCCACGATCTTAACTCAGT+TGG | - | chr7.2:85368706-85368725 | None:intergenic | 45.0% | |
TCCTACCCCAATTTGACAAG+TGG | + | chr7.2:85370525-85370544 | MS.gene057550:intron | 45.0% | |
TCTACTCGGACCAATGATGA+TGG | + | chr7.2:85368302-85368321 | MS.gene057550:CDS | 45.0% | |
TGTCGTCAACGTTGTAGATC+CGG | - | chr7.2:85368942-85368961 | None:intergenic | 45.0% | |
TTAGGGATTGAGCATGTTGG+AGG | + | chr7.2:85371548-85371567 | MS.gene057550:intron | 45.0% | |
! | AACTCGGAGGGGTGATTTTT+GGG | + | chr7.2:85369183-85369202 | MS.gene057550:intron | 45.0% |
! | AGCGCCGAATTCCAAACAAT+GGG | - | chr7.2:85369718-85369737 | None:intergenic | 45.0% |
! | AGTTTGGTTGATGTTGGAGG+TGG | + | chr7.2:85371310-85371329 | MS.gene057550:CDS | 45.0% |
! | TAGCGCCGAATTCCAAACAA+TGG | - | chr7.2:85369719-85369738 | None:intergenic | 45.0% |
!! | GGCAAATCAGAGTGTTGAGT+TGG | - | chr7.2:85368227-85368246 | None:intergenic | 45.0% |
!!! | CTTTTTTTTTGTGGTGGCCG+GGG | + | chr7.2:85370746-85370765 | MS.gene057550:intron | 45.0% |
!! | AAATATTAAAATACATATAA+TGG | + | chr7.2:85368593-85368612 | MS.gene057550:intron | 5.0% |
!!! | AAGTATTTTTTTTTTTAAAT+TGG | + | chr7.2:85370964-85370983 | MS.gene057550:intron | 5.0% |
!!! | AGTATTTTTTTTTTTAAATT+GGG | + | chr7.2:85370965-85370984 | MS.gene057550:intron | 5.0% |
!!! | TAATTTTCTAATAAATAATT+TGG | - | chr7.2:85370552-85370571 | None:intergenic | 5.0% |
ATCCGGAGACACGAGTATTC+CGG | - | chr7.2:85368925-85368944 | None:intergenic | 50.0% | |
ATCTGACCAAATACCTCCCC+AGG | + | chr7.2:85369994-85370013 | MS.gene057550:intron | 50.0% | |
CCCCTCTGACAAGAAGAAGA+AGG | + | chr7.2:85369226-85369245 | MS.gene057550:intron | 50.0% | |
GAAAATGCACCACCCATTCC+AGG | + | chr7.2:85371412-85371431 | MS.gene057550:CDS | 50.0% | |
GAAACTTAAAGGACCTGGGG+AGG | - | chr7.2:85370010-85370029 | None:intergenic | 50.0% | |
GTGACAGCTAGGGTTTGAGA+AGG | + | chr7.2:85369261-85369280 | MS.gene057550:intron | 50.0% | |
TATGTCCGGAGTTCAAACCC+CGG | - | chr7.2:85370766-85370785 | None:intergenic | 50.0% | |
! | CAACTCGGAGGGGTGATTTT+TGG | + | chr7.2:85369182-85369201 | MS.gene057550:intron | 50.0% |
!! | AAAGGACCTGGGGAGGTATT+TGG | - | chr7.2:85370003-85370022 | None:intergenic | 50.0% |
CTCCGGAATACTCGTGTCTC+CGG | + | chr7.2:85368920-85368939 | MS.gene057550:intron | 55.0% | |
GGATGCAGTACTTGATCCGG+AGG | + | chr7.2:85371132-85371151 | MS.gene057550:CDS | 55.0% | |
GGTGTCCAAGGTTAGAACCC+TGG | + | chr7.2:85368652-85368671 | MS.gene057550:intron | 55.0% | |
! | GAGGGTTTGGCTCAACGTTC+TGG | + | chr7.2:85371959-85371978 | MS.gene057550:CDS | 55.0% |
GGTGGCCGGGGTTTGAACTC+CGG | + | chr7.2:85370758-85370777 | MS.gene057550:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 85368026 | 85372048 | 85368026 | ID=MS.gene057550 |
chr7.2 | mRNA | 85368026 | 85372048 | 85368026 | ID=MS.gene057550.t1;Parent=MS.gene057550 |
chr7.2 | exon | 85368026 | 85368450 | 85368026 | ID=MS.gene057550.t1.exon1;Parent=MS.gene057550.t1 |
chr7.2 | CDS | 85368026 | 85368450 | 85368026 | ID=cds.MS.gene057550.t1;Parent=MS.gene057550.t1 |
chr7.2 | exon | 85371120 | 85371433 | 85371120 | ID=MS.gene057550.t1.exon2;Parent=MS.gene057550.t1 |
chr7.2 | CDS | 85371120 | 85371433 | 85371120 | ID=cds.MS.gene057550.t1;Parent=MS.gene057550.t1 |
chr7.2 | exon | 85371552 | 85371616 | 85371552 | ID=MS.gene057550.t1.exon3;Parent=MS.gene057550.t1 |
chr7.2 | CDS | 85371552 | 85371616 | 85371552 | ID=cds.MS.gene057550.t1;Parent=MS.gene057550.t1 |
chr7.2 | exon | 85371752 | 85372048 | 85371752 | ID=MS.gene057550.t1.exon4;Parent=MS.gene057550.t1 |
chr7.2 | CDS | 85371752 | 85372048 | 85371752 | ID=cds.MS.gene057550.t1;Parent=MS.gene057550.t1 |
Gene Sequence |
Protein sequence |