Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45437.t1 | RHN38812.1 | 78.3 | 534 | 71 | 1 | 1 | 489 | 1 | 534 | 3.30E-162 | 581.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45437.t1 | O80792 | 45.3 | 106 | 45 | 2 | 51 | 149 | 76 | 175 | 1.2e-16 | 89.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45437.t1 | A0A396GAR2 | 78.3 | 534 | 71 | 1 | 1 | 489 | 1 | 534 | 2.4e-162 | 581.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050301 | MS.gene45437 | 0.824842 | 6.48E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene45437 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene45437 | 0.807689 | 4.47E-50 | -1.69E-46 |
| MS.gene053577 | MS.gene45437 | 0.806504 | 7.97E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene45437 | 0.803837 | 2.88E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene45437 | 0.806504 | 7.97E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene45437 | 0.805948 | 1.04E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene45437 | 0.81055 | 1.09E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene45437 | 0.830188 | 3.38E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene45437 | 0.802663 | 5.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45437.t1 | MTR_0874s0010 | 94.156 | 154 | 9 | 0 | 336 | 489 | 1 | 154 | 1.44e-97 | 291 |
| MS.gene45437.t1 | MTR_8g097000 | 44.118 | 102 | 53 | 1 | 51 | 152 | 31 | 128 | 1.09e-18 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45437.t1 | AT2G37920 | 78.767 | 146 | 31 | 0 | 43 | 188 | 42 | 187 | 2.05e-82 | 256 |
| MS.gene45437.t1 | AT2G07750 | 47.170 | 106 | 43 | 3 | 51 | 149 | 76 | 175 | 1.74e-19 | 92.4 |
| MS.gene45437.t1 | AT1G63250 | 47.000 | 100 | 52 | 1 | 51 | 149 | 26 | 125 | 9.41e-19 | 90.1 |
Find 172 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAGTTGCTTGGCCTTCT+TGG | 0.077587 | 8.4:-78361643 | None:intergenic |
| TCTTCTTCTCCTTTGAATTA+TGG | 0.136407 | 8.4:+78362056 | MS.gene45437:CDS |
| ATTATTCTTCTTTGAATTCT+AGG | 0.168750 | 8.4:+78362384 | MS.gene45437:CDS |
| CTTCTTCTCCTTTGAATTAT+GGG | 0.214225 | 8.4:+78362057 | MS.gene45437:CDS |
| AGATACCGAAATTTATGATA+TGG | 0.227787 | 8.4:+78362811 | MS.gene45437:CDS |
| TGATGAGCAGCTCAAGGTTT+TGG | 0.278740 | 8.4:+78361797 | MS.gene45437:CDS |
| CTGCTAGGTTCTTTCCTAAA+GGG | 0.284470 | 8.4:+78361907 | MS.gene45437:CDS |
| TTTATTCCAAAGGGTGTAGA+TGG | 0.302620 | 8.4:+78362461 | MS.gene45437:CDS |
| ATGAGAGTAGGTATTCATTA+GGG | 0.307314 | 8.4:+78362333 | MS.gene45437:CDS |
| ATACTATGAACAACCCCTTT+AGG | 0.307915 | 8.4:-78361921 | None:intergenic |
| CAAACCCATATCATAAATTT+CGG | 0.327120 | 8.4:-78362816 | None:intergenic |
| AACCTGGTGGGTTTGACCTT+TGG | 0.327293 | 8.4:+78361835 | MS.gene45437:CDS |
| GATGGCAATTTCGGGAATAA+AGG | 0.329120 | 8.4:+78362539 | MS.gene45437:CDS |
| TTTATGTCAAAGGATGTTAA+TGG | 0.339335 | 8.4:+78362656 | MS.gene45437:CDS |
| AATGAGAGTAGGTATTCATT+AGG | 0.350069 | 8.4:+78362332 | MS.gene45437:CDS |
| GATACCGAAATTTATGATAT+GGG | 0.353338 | 8.4:+78362812 | MS.gene45437:CDS |
| GGTGATGCTGTTAGGTCTAA+TGG | 0.357522 | 8.4:+78362590 | MS.gene45437:CDS |
| AAGGATGTTAATGGGTCTAA+TGG | 0.358690 | 8.4:+78362665 | MS.gene45437:CDS |
| TCCATTGCAGGCAGGAGATA+TGG | 0.367211 | 8.4:+78362737 | MS.gene45437:CDS |
| ATTCTTCTCATTTGAGTACT+AGG | 0.372736 | 8.4:+78362273 | MS.gene45437:CDS |
| TCTCTGAGTTGGAGAGGCCT+TGG | 0.375598 | 8.4:+78361733 | MS.gene45437:CDS |
| TCTGCTAGGTTCTTTCCTAA+AGG | 0.378700 | 8.4:+78361906 | MS.gene45437:CDS |
| CTCTGAGTTGGAGAGGCCTT+GGG | 0.383541 | 8.4:+78361734 | MS.gene45437:CDS |
| CTAGCAGAAGGCAACTCATC+AGG | 0.385882 | 8.4:-78361891 | None:intergenic |
| TCACTAGTAACCTTCATATA+AGG | 0.389583 | 8.4:-78361948 | None:intergenic |
| CCAACAATGGTGATGCTGTT+AGG | 0.391142 | 8.4:+78362582 | MS.gene45437:CDS |
| AGAGGGAGTAATTCCATTGC+AGG | 0.400461 | 8.4:+78362725 | MS.gene45437:CDS |
| GGATTGAGAAAGAACGGAAA+TGG | 0.400821 | 8.4:+78362221 | MS.gene45437:CDS |
| ACCCCACCCGGGTACGTCCT+TGG | 0.402692 | 8.4:-78361591 | None:intergenic |
| AGAAGAATGTTCCCCATCAT+TGG | 0.409792 | 8.4:-78362258 | None:intergenic |
| ATGGCAATTTCGGGAATAAA+GGG | 0.411540 | 8.4:+78362540 | MS.gene45437:CDS |
| CTTGAAGGCGCGACTGTGCC+GGG | 0.412431 | 8.4:+78361662 | MS.gene45437:CDS |
| GCTTTGATAGAGAACAACTT+AGG | 0.416712 | 8.4:-78361774 | None:intergenic |
| CCTAACAGCATCACCATTGT+TGG | 0.423179 | 8.4:-78362582 | None:intergenic |
| TGCCACTTGGACACCCCACC+CGG | 0.423897 | 8.4:-78361603 | None:intergenic |
| TCTTGAAGGCGCGACTGTGC+CGG | 0.426312 | 8.4:+78361661 | MS.gene45437:CDS |
| GAAGGCCAAGCAACTCTTGA+AGG | 0.427019 | 8.4:+78361647 | MS.gene45437:CDS |
| TGGTGGGCCAAGGACGTACC+CGG | 0.430275 | 8.4:+78361584 | MS.gene45437:CDS |
| GGCAGTCGATTGCGAAAGAA+TGG | 0.430627 | 8.4:+78362098 | MS.gene45437:CDS |
| GCCAAGGACGTACCCGGGTG+GGG | 0.432059 | 8.4:+78361590 | MS.gene45437:CDS |
| AGGATGTTAATGGGTCTAAT+GGG | 0.439258 | 8.4:+78362666 | MS.gene45437:CDS |
| TTGAATGGCAGAACAAGAAC+AGG | 0.441966 | 8.4:+78361496 | MS.gene45437:CDS |
| TTATGTCAAAGGATGTTAAT+GGG | 0.444096 | 8.4:+78362657 | MS.gene45437:CDS |
| AGGAGGTATCGGTCCAATGA+TGG | 0.447789 | 8.4:+78362245 | MS.gene45437:CDS |
| GTGGGGTGTCCAAGTGGCAG+TGG | 0.448779 | 8.4:+78361607 | MS.gene45437:CDS |
| GTTGGAGAGGCCTTGGGAGG+TGG | 0.450649 | 8.4:+78361740 | MS.gene45437:CDS |
| GGGCCAAGGACGTACCCGGG+TGG | 0.452437 | 8.4:+78361588 | MS.gene45437:CDS |
| TCCTTGGCCCACCACCCATT+CGG | 0.453379 | 8.4:-78361575 | None:intergenic |
| GATTGAGAAAGAACGGAAAT+GGG | 0.453467 | 8.4:+78362222 | MS.gene45437:CDS |
| GAATAATGATCTTCATTGTC+TGG | 0.454399 | 8.4:-78362368 | None:intergenic |
| TCCGACCCATCTACACCCTT+TGG | 0.454564 | 8.4:-78362467 | None:intergenic |
| CTTTGATAGAGAACAACTTA+GGG | 0.454597 | 8.4:-78361773 | None:intergenic |
| AGATCGAGGAGGAAGGAGAG+TGG | 0.463137 | 8.4:+78362626 | MS.gene45437:CDS |
| ATGATGGTGGTGAAGGGTAT+TGG | 0.466572 | 8.4:+78362003 | MS.gene45437:CDS |
| TCTTTGAATTCTAGGAGGAA+TGG | 0.471020 | 8.4:+78362392 | MS.gene45437:CDS |
| TTTCATATATTTGCCGCTCC+CGG | 0.471772 | 8.4:-78361680 | None:intergenic |
| GACCTTTGGACGGAAAATGA+TGG | 0.473692 | 8.4:+78361849 | MS.gene45437:CDS |
| TCTCCTTCACATGCGAGGAA+TGG | 0.479275 | 8.4:+78362506 | MS.gene45437:CDS |
| CGTTCAACTGTGATCCGAAT+GGG | 0.479445 | 8.4:+78361561 | MS.gene45437:CDS |
| GTGGCAGTGGAAGCGTATGC+AGG | 0.480726 | 8.4:+78361620 | MS.gene45437:CDS |
| GGAGGTATCGGTCCAATGAT+GGG | 0.481646 | 8.4:+78362246 | MS.gene45437:CDS |
| GGAAGGAAGTTTATTCCAAA+GGG | 0.482831 | 8.4:+78362452 | MS.gene45437:CDS |
| GGCCAAGGACGTACCCGGGT+GGG | 0.483142 | 8.4:+78361589 | MS.gene45437:CDS |
| TCCGAATGGGTGGTGGGCCA+AGG | 0.486021 | 8.4:+78361574 | MS.gene45437:CDS |
| TCGCGCCTTCAAGAGTTGCT+TGG | 0.489206 | 8.4:-78361652 | None:intergenic |
| GCTGTTAGGTCTAATGGATC+TGG | 0.495565 | 8.4:+78362596 | MS.gene45437:CDS |
| GGAGGAAGGAGAGTGGAAAG+AGG | 0.496002 | 8.4:+78362633 | MS.gene45437:CDS |
| GGCTTCTCAACCACCTCCCA+AGG | 0.496571 | 8.4:-78361750 | None:intergenic |
| TGGAAAGAGGTTTATGTCAA+AGG | 0.497907 | 8.4:+78362646 | MS.gene45437:CDS |
| GATATGGGTTTGCAACAAGA+TGG | 0.500193 | 8.4:+78362827 | MS.gene45437:CDS |
| CTGATGAGTTGCCTTCTGCT+AGG | 0.501687 | 8.4:+78361892 | MS.gene45437:CDS |
| GAGGAAGAGGGCTGAGCTCA+AGG | 0.501941 | 8.4:+78361704 | MS.gene45437:CDS |
| AGGCGCGACTGTGCCGGGAG+CGG | 0.508240 | 8.4:+78361667 | MS.gene45437:CDS |
| GGTTACTAGTGATGACTTGT+TGG | 0.508742 | 8.4:+78361959 | MS.gene45437:CDS |
| TAGTATCAAGCCTTATATGA+AGG | 0.508811 | 8.4:+78361938 | MS.gene45437:CDS |
| GAGAAGAATGCTCCCCATCA+TGG | 0.510637 | 8.4:-78362160 | None:intergenic |
| TCGTTCAACTGTGATCCGAA+TGG | 0.514392 | 8.4:+78361560 | MS.gene45437:CDS |
| TGCTAGGTTCTTTCCTAAAG+GGG | 0.514477 | 8.4:+78361908 | MS.gene45437:CDS |
| GGGTCTAATGGGATGTATGC+AGG | 0.514728 | 8.4:+78362677 | MS.gene45437:CDS |
| TCCATATCTCCTGCCTGCAA+TGG | 0.515308 | 8.4:-78362738 | None:intergenic |
| CAAGGCTGCCGTCTCTGAGT+TGG | 0.515966 | 8.4:+78361722 | MS.gene45437:CDS |
| GCTGATAGGTTTCAGAAACC+TGG | 0.517147 | 8.4:+78361819 | MS.gene45437:CDS |
| AGAATGAGGAAGCACGGGAA+TGG | 0.520786 | 8.4:+78362431 | MS.gene45437:CDS |
| CATACGCTTCCACTGCCACT+TGG | 0.521521 | 8.4:-78361616 | None:intergenic |
| ATTCATTAGGGGATGTTGAT+CGG | 0.523054 | 8.4:+78362345 | MS.gene45437:CDS |
| ATGTTGATCGGTCCCATGAT+GGG | 0.524280 | 8.4:+78362147 | MS.gene45437:CDS |
| ACGGAAATGGGAGGAGGTAT+CGG | 0.531125 | 8.4:+78362234 | MS.gene45437:CDS |
| AGAAGAATGCTCCCCATCAT+GGG | 0.534687 | 8.4:-78362159 | None:intergenic |
| TAGCAGAAGGCAACTCATCA+GGG | 0.534840 | 8.4:-78361890 | None:intergenic |
| AATGTTGATCGGTCCCATGA+TGG | 0.538551 | 8.4:+78362146 | MS.gene45437:CDS |
| TGAGGAAGCACGGGAATGGA+AGG | 0.547129 | 8.4:+78362435 | MS.gene45437:CDS |
| TACTAGTGATGACTTGTTGG+AGG | 0.548058 | 8.4:+78361962 | MS.gene45437:CDS |
| GTCCAAAGGTCAAACCCACC+AGG | 0.553425 | 8.4:-78361837 | None:intergenic |
| GGAGTAATTCCATTGCAGGC+AGG | 0.555506 | 8.4:+78362729 | MS.gene45437:CDS |
| TGCGAAAGAATGGGAATGGA+AGG | 0.556399 | 8.4:+78362108 | MS.gene45437:CDS |
| ACTGTGATCCGAATGGGTGG+TGG | 0.557980 | 8.4:+78361567 | MS.gene45437:CDS |
| CTAGAAAATGATGGTGGTGA+AGG | 0.558411 | 8.4:+78361996 | MS.gene45437:CDS |
| TGGAAGGAAGTTTATTCCAA+AGG | 0.560885 | 8.4:+78362451 | MS.gene45437:CDS |
| AAATATATGAAATGAGGAAG+AGG | 0.565243 | 8.4:+78361691 | MS.gene45437:CDS |
| TGATATTAGATCGAGGAGGA+AGG | 0.568183 | 8.4:+78362619 | MS.gene45437:CDS |
| CGATTGCGAAAGAATGGGAA+TGG | 0.568665 | 8.4:+78362104 | MS.gene45437:CDS |
| GCAGTCGATTGCGAAAGAAT+GGG | 0.569522 | 8.4:+78362099 | MS.gene45437:CDS |
| ATGCTAGAATGAGGAAGCAC+GGG | 0.570036 | 8.4:+78362426 | MS.gene45437:CDS |
| GCTCCATTCCTCGCATGTGA+AGG | 0.570651 | 8.4:-78362509 | None:intergenic |
| GGTGGGCCAAGGACGTACCC+GGG | 0.571085 | 8.4:+78361585 | MS.gene45437:CDS |
| TCCAAAGGGTGTAGATGGGT+CGG | 0.572590 | 8.4:+78362466 | MS.gene45437:CDS |
| CTGCCGTCTCTGAGTTGGAG+AGG | 0.572800 | 8.4:+78361727 | MS.gene45437:CDS |
| TGGTGGGTTTGACCTTTGGA+CGG | 0.574252 | 8.4:+78361839 | MS.gene45437:CDS |
| CTTCTCCTTTGAATTATGGG+AGG | 0.575559 | 8.4:+78362060 | MS.gene45437:CDS |
| GAAGCGTATGCAGGCCAAGA+AGG | 0.575961 | 8.4:+78361629 | MS.gene45437:CDS |
| CTTCTCATTTGAGTACTAGG+AGG | 0.576406 | 8.4:+78362276 | MS.gene45437:CDS |
| TCATTCCTCCCATAATTCAA+AGG | 0.577456 | 8.4:-78362065 | None:intergenic |
| TAGAAAATGATGGTGGTGAA+GGG | 0.579764 | 8.4:+78361997 | MS.gene45437:CDS |
| GAATAAAGGGAGTGCAAGGA+GGG | 0.580424 | 8.4:+78362553 | MS.gene45437:CDS |
| GTTCTTCTCCTTCACATGCG+AGG | 0.582316 | 8.4:+78362501 | MS.gene45437:CDS |
| CAAATATTGATGCTAGAATG+AGG | 0.585058 | 8.4:+78362417 | MS.gene45437:CDS |
| TTATTCCAAAGGGTGTAGAT+GGG | 0.587028 | 8.4:+78362462 | MS.gene45437:CDS |
| CAAAGCTGATGAGCAGCTCA+AGG | 0.588229 | 8.4:+78361791 | MS.gene45437:CDS |
| GGGAGGAATGAAGCGAGTGT+TGG | 0.589284 | 8.4:+78362077 | MS.gene45437:CDS |
| CGTGGTGGATTGAGAAAGAA+CGG | 0.589392 | 8.4:+78362215 | MS.gene45437:CDS |
| GAAAGAACGGAAATGGGAGG+AGG | 0.590748 | 8.4:+78362228 | MS.gene45437:CDS |
| ATTCTTCTTTGAATTCTAGG+AGG | 0.595094 | 8.4:+78362387 | MS.gene45437:CDS |
| TGAGTTGGAGAGGCCTTGGG+AGG | 0.596213 | 8.4:+78361737 | MS.gene45437:CDS |
| ATGAGTGAATTGAATATTCG+TGG | 0.598183 | 8.4:+78362197 | MS.gene45437:CDS |
| GATGCTAGAATGAGGAAGCA+CGG | 0.598567 | 8.4:+78362425 | MS.gene45437:CDS |
| ACCCGGGTGGGGTGTCCAAG+TGG | 0.601573 | 8.4:+78361601 | MS.gene45437:CDS |
| GAGGTATCGGTCCAATGATG+GGG | 0.604026 | 8.4:+78362247 | MS.gene45437:CDS |
| TTCAAACAATGCTTCACGAA+GGG | 0.605338 | 8.4:+78362778 | MS.gene45437:CDS |
| TCTGATGTTCTAGAAAATGA+TGG | 0.606853 | 8.4:+78361987 | MS.gene45437:CDS |
| AATATATGAAATGAGGAAGA+GGG | 0.611111 | 8.4:+78361692 | MS.gene45437:CDS |
| AGCGGCAAATATATGAAATG+AGG | 0.611343 | 8.4:+78361685 | MS.gene45437:CDS |
| CTGTGATCCGAATGGGTGGT+GGG | 0.612200 | 8.4:+78361568 | MS.gene45437:CDS |
| GATAGGTTTCAGAAACCTGG+TGG | 0.612203 | 8.4:+78361822 | MS.gene45437:CDS |
| GATTCAGAAAGAATGAGAGT+AGG | 0.614189 | 8.4:+78362321 | MS.gene45437:CDS |
| ACTAGTGATGACTTGTTGGA+GGG | 0.615860 | 8.4:+78361963 | MS.gene45437:CDS |
| AGATGATGTTCATGATGGTG+AGG | 0.616675 | 8.4:+78362028 | MS.gene45437:CDS |
| TGTTGATCGGTCCCATGATG+GGG | 0.619198 | 8.4:+78362148 | MS.gene45437:CDS |
| GAAAGAATGGGAATGGAAGG+AGG | 0.619892 | 8.4:+78362111 | MS.gene45437:CDS |
| AGCAACCTGACTCTACAAGC+TGG | 0.620354 | 8.4:+78362873 | MS.gene45437:CDS |
| GCCACTTGGACACCCCACCC+GGG | 0.621232 | 8.4:-78361602 | None:intergenic |
| ATCACAGTTGAACGAGAAGG+TGG | 0.621729 | 8.4:-78361552 | None:intergenic |
| GGAATAAAGGGAGTGCAAGG+AGG | 0.625678 | 8.4:+78362552 | MS.gene45437:CDS |
| CGGATCACAGTTGAACGAGA+AGG | 0.627012 | 8.4:-78361555 | None:intergenic |
| CAGGAATGTGCTGTCCCTCA+CGG | 0.627917 | 8.4:+78361515 | MS.gene45437:CDS |
| ATAGGTTTCAGAAACCTGGT+GGG | 0.627960 | 8.4:+78361823 | MS.gene45437:CDS |
| TTAGGAAAGAACCTAGCAGA+AGG | 0.630171 | 8.4:-78361903 | None:intergenic |
| AGGAGTGAACTGAATGTTCG+TGG | 0.632328 | 8.4:+78362296 | MS.gene45437:CDS |
| TTGATAGAGAACAACTTAGG+GGG | 0.634929 | 8.4:-78361771 | None:intergenic |
| TCGGGAATAAAGGGAGTGCA+AGG | 0.635659 | 8.4:+78362549 | MS.gene45437:CDS |
| TGAGAGTAGGTATTCATTAG+GGG | 0.635950 | 8.4:+78362334 | MS.gene45437:CDS |
| TGAGAAAGAACGGAAATGGG+AGG | 0.647593 | 8.4:+78362225 | MS.gene45437:CDS |
| TGGTCAGATGATGTTCATGA+TGG | 0.647813 | 8.4:+78362023 | MS.gene45437:CDS |
| ATTTGTCAGAGAATGTTGAT+CGG | 0.655103 | 8.4:+78362135 | MS.gene45437:CDS |
| GATGTTCATGATGGTGAGGG+TGG | 0.656053 | 8.4:+78362032 | MS.gene45437:CDS |
| AGGCCTCTCCAACTCAGAGA+CGG | 0.658235 | 8.4:-78361730 | None:intergenic |
| TCAACTGTGATCCGAATGGG+TGG | 0.663322 | 8.4:+78361564 | MS.gene45437:CDS |
| AGCAGAAGGCAACTCATCAG+GGG | 0.664647 | 8.4:-78361889 | None:intergenic |
| GGACGGAAAATGATGGACCA+CGG | 0.666697 | 8.4:+78361856 | MS.gene45437:CDS |
| TTTGATAGAGAACAACTTAG+GGG | 0.666749 | 8.4:-78361772 | None:intergenic |
| GATGATGTTCATGATGGTGA+GGG | 0.668985 | 8.4:+78362029 | MS.gene45437:CDS |
| CTTCTGACAGAACACAGAGA+GGG | 0.672768 | 8.4:+78362708 | MS.gene45437:CDS |
| AGTGAATTGAATATTCGTGG+TGG | 0.678453 | 8.4:+78362200 | MS.gene45437:CDS |
| TGACAGTTGTTGTACCACGT+TGG | 0.678494 | 8.4:-78361445 | None:intergenic |
| CTTCAAACAATGCTTCACGA+AGG | 0.679253 | 8.4:+78362777 | MS.gene45437:CDS |
| GCTTCTGACAGAACACAGAG+AGG | 0.682151 | 8.4:+78362707 | MS.gene45437:CDS |
| GATATGGAAAATATACTCAG+AGG | 0.693542 | 8.4:+78362753 | MS.gene45437:CDS |
| CTGGTGATATTAGATCGAGG+AGG | 0.701118 | 8.4:+78362615 | MS.gene45437:CDS |
| GATCTGGTGATATTAGATCG+AGG | 0.719396 | 8.4:+78362612 | MS.gene45437:CDS |
| AGTGAACTGAATGTTCGTGG+TGG | 0.720003 | 8.4:+78362299 | MS.gene45437:CDS |
| GATGTTCTAGAAAATGATGG+TGG | 0.729583 | 8.4:+78361990 | MS.gene45437:CDS |
| GAATGTGTTATTCGCCAACG+TGG | 0.736711 | 8.4:+78361431 | MS.gene45437:CDS |
| TCAGGGGTTTGAAACAACCG+TGG | 0.739131 | 8.4:-78361873 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTCTTCTTTGAATTCT+AGG | + | chr8.4:78362384-78362403 | MS.gene45437:CDS | 20.0% |
| !!! | AATCTTTATCAAGTTTTGAA+TGG | + | chr8.4:78361481-78361500 | MS.gene45437:CDS | 20.0% |
| ! | AAATATATGAAATGAGGAAG+AGG | + | chr8.4:78361691-78361710 | MS.gene45437:CDS | 25.0% |
| ! | AATATATGAAATGAGGAAGA+GGG | + | chr8.4:78361692-78361711 | MS.gene45437:CDS | 25.0% |
| ! | AGATACCGAAATTTATGATA+TGG | + | chr8.4:78362811-78362830 | MS.gene45437:CDS | 25.0% |
| ! | CAAACCCATATCATAAATTT+CGG | - | chr8.4:78362819-78362838 | None:intergenic | 25.0% |
| ! | GATACCGAAATTTATGATAT+GGG | + | chr8.4:78362812-78362831 | MS.gene45437:CDS | 25.0% |
| ! | TTATGTCAAAGGATGTTAAT+GGG | + | chr8.4:78362657-78362676 | MS.gene45437:CDS | 25.0% |
| ! | TTTATGTCAAAGGATGTTAA+TGG | + | chr8.4:78362656-78362675 | MS.gene45437:CDS | 25.0% |
| AATGAGAGTAGGTATTCATT+AGG | + | chr8.4:78362332-78362351 | MS.gene45437:CDS | 30.0% | |
| ATGAGAGTAGGTATTCATTA+GGG | + | chr8.4:78362333-78362352 | MS.gene45437:CDS | 30.0% | |
| ATGAGTGAATTGAATATTCG+TGG | + | chr8.4:78362197-78362216 | MS.gene45437:CDS | 30.0% | |
| ATTCTTCTCATTTGAGTACT+AGG | + | chr8.4:78362273-78362292 | MS.gene45437:CDS | 30.0% | |
| ATTCTTCTTTGAATTCTAGG+AGG | + | chr8.4:78362387-78362406 | MS.gene45437:CDS | 30.0% | |
| ATTTGTCAGAGAATGTTGAT+CGG | + | chr8.4:78362135-78362154 | MS.gene45437:CDS | 30.0% | |
| CAAATATTGATGCTAGAATG+AGG | + | chr8.4:78362417-78362436 | MS.gene45437:CDS | 30.0% | |
| CTTCTTCTCCTTTGAATTAT+GGG | + | chr8.4:78362057-78362076 | MS.gene45437:CDS | 30.0% | |
| CTTTGATAGAGAACAACTTA+GGG | - | chr8.4:78361776-78361795 | None:intergenic | 30.0% | |
| GAATAATGATCTTCATTGTC+TGG | - | chr8.4:78362371-78362390 | None:intergenic | 30.0% | |
| GATATGGAAAATATACTCAG+AGG | + | chr8.4:78362753-78362772 | MS.gene45437:CDS | 30.0% | |
| TCACTAGTAACCTTCATATA+AGG | - | chr8.4:78361951-78361970 | None:intergenic | 30.0% | |
| TCTTCTTCTCCTTTGAATTA+TGG | + | chr8.4:78362056-78362075 | MS.gene45437:CDS | 30.0% | |
| TTTGATAGAGAACAACTTAG+GGG | - | chr8.4:78361775-78361794 | None:intergenic | 30.0% | |
| ! | TAGTATCAAGCCTTATATGA+AGG | + | chr8.4:78361938-78361957 | MS.gene45437:CDS | 30.0% |
| !! | TCTGATGTTCTAGAAAATGA+TGG | + | chr8.4:78361987-78362006 | MS.gene45437:CDS | 30.0% |
| AGCGGCAAATATATGAAATG+AGG | + | chr8.4:78361685-78361704 | MS.gene45437:CDS | 35.0% | |
| AGTGAATTGAATATTCGTGG+TGG | + | chr8.4:78362200-78362219 | MS.gene45437:CDS | 35.0% | |
| ATACTATGAACAACCCCTTT+AGG | - | chr8.4:78361924-78361943 | None:intergenic | 35.0% | |
| ATGGCAATTTCGGGAATAAA+GGG | + | chr8.4:78362540-78362559 | MS.gene45437:CDS | 35.0% | |
| ATTCATTAGGGGATGTTGAT+CGG | + | chr8.4:78362345-78362364 | MS.gene45437:CDS | 35.0% | |
| GATTCAGAAAGAATGAGAGT+AGG | + | chr8.4:78362321-78362340 | MS.gene45437:CDS | 35.0% | |
| GATTGAGAAAGAACGGAAAT+GGG | + | chr8.4:78362222-78362241 | MS.gene45437:CDS | 35.0% | |
| GCTTTGATAGAGAACAACTT+AGG | - | chr8.4:78361777-78361796 | None:intergenic | 35.0% | |
| GGAAGGAAGTTTATTCCAAA+GGG | + | chr8.4:78362452-78362471 | MS.gene45437:CDS | 35.0% | |
| TCATTCCTCCCATAATTCAA+AGG | - | chr8.4:78362068-78362087 | None:intergenic | 35.0% | |
| TGAGAGTAGGTATTCATTAG+GGG | + | chr8.4:78362334-78362353 | MS.gene45437:CDS | 35.0% | |
| TGGAAAGAGGTTTATGTCAA+AGG | + | chr8.4:78362646-78362665 | MS.gene45437:CDS | 35.0% | |
| TGGAAGGAAGTTTATTCCAA+AGG | + | chr8.4:78362451-78362470 | MS.gene45437:CDS | 35.0% | |
| TTCAAACAATGCTTCACGAA+GGG | + | chr8.4:78362778-78362797 | MS.gene45437:CDS | 35.0% | |
| TTGATAGAGAACAACTTAGG+GGG | - | chr8.4:78361774-78361793 | None:intergenic | 35.0% | |
| ! | AAGGATGTTAATGGGTCTAA+TGG | + | chr8.4:78362665-78362684 | MS.gene45437:CDS | 35.0% |
| ! | AGGATGTTAATGGGTCTAAT+GGG | + | chr8.4:78362666-78362685 | MS.gene45437:CDS | 35.0% |
| ! | TCTTTGAATTCTAGGAGGAA+TGG | + | chr8.4:78362392-78362411 | MS.gene45437:CDS | 35.0% |
| ! | TTATTCCAAAGGGTGTAGAT+GGG | + | chr8.4:78362462-78362481 | MS.gene45437:CDS | 35.0% |
| ! | TTTATTCCAAAGGGTGTAGA+TGG | + | chr8.4:78362461-78362480 | MS.gene45437:CDS | 35.0% |
| !! | GATGTTCTAGAAAATGATGG+TGG | + | chr8.4:78361990-78362009 | MS.gene45437:CDS | 35.0% |
| !! | TAGAAAATGATGGTGGTGAA+GGG | + | chr8.4:78361997-78362016 | MS.gene45437:CDS | 35.0% |
| AGAAGAATGTTCCCCATCAT+TGG | - | chr8.4:78362261-78362280 | None:intergenic | 40.0% | |
| ATAGGTTTCAGAAACCTGGT+GGG | + | chr8.4:78361823-78361842 | MS.gene45437:CDS | 40.0% | |
| CTGCTAGGTTCTTTCCTAAA+GGG | + | chr8.4:78361907-78361926 | MS.gene45437:CDS | 40.0% | |
| CTTCAAACAATGCTTCACGA+AGG | + | chr8.4:78362777-78362796 | MS.gene45437:CDS | 40.0% | |
| CTTCTCATTTGAGTACTAGG+AGG | + | chr8.4:78362276-78362295 | MS.gene45437:CDS | 40.0% | |
| CTTCTCCTTTGAATTATGGG+AGG | + | chr8.4:78362060-78362079 | MS.gene45437:CDS | 40.0% | |
| GATATGGGTTTGCAACAAGA+TGG | + | chr8.4:78362827-78362846 | MS.gene45437:CDS | 40.0% | |
| GATCTGGTGATATTAGATCG+AGG | + | chr8.4:78362612-78362631 | MS.gene45437:CDS | 40.0% | |
| GATGGCAATTTCGGGAATAA+AGG | + | chr8.4:78362539-78362558 | MS.gene45437:CDS | 40.0% | |
| GGATTGAGAAAGAACGGAAA+TGG | + | chr8.4:78362221-78362240 | MS.gene45437:CDS | 40.0% | |
| TCTGCTAGGTTCTTTCCTAA+AGG | + | chr8.4:78361906-78361925 | MS.gene45437:CDS | 40.0% | |
| TGATATTAGATCGAGGAGGA+AGG | + | chr8.4:78362619-78362638 | MS.gene45437:CDS | 40.0% | |
| TGCTAGGTTCTTTCCTAAAG+GGG | + | chr8.4:78361908-78361927 | MS.gene45437:CDS | 40.0% | |
| TGGTCAGATGATGTTCATGA+TGG | + | chr8.4:78362023-78362042 | MS.gene45437:CDS | 40.0% | |
| TTAGGAAAGAACCTAGCAGA+AGG | - | chr8.4:78361906-78361925 | None:intergenic | 40.0% | |
| TTGAATGGCAGAACAAGAAC+AGG | + | chr8.4:78361496-78361515 | MS.gene45437:CDS | 40.0% | |
| TTTCATATATTTGCCGCTCC+CGG | - | chr8.4:78361683-78361702 | None:intergenic | 40.0% | |
| ! | AGATGATGTTCATGATGGTG+AGG | + | chr8.4:78362028-78362047 | MS.gene45437:CDS | 40.0% |
| ! | GATGATGTTCATGATGGTGA+GGG | + | chr8.4:78362029-78362048 | MS.gene45437:CDS | 40.0% |
| ! | GGTTACTAGTGATGACTTGT+TGG | + | chr8.4:78361959-78361978 | MS.gene45437:CDS | 40.0% |
| !! | ACTAGTGATGACTTGTTGGA+GGG | + | chr8.4:78361963-78361982 | MS.gene45437:CDS | 40.0% |
| !! | AGGAGGGTTTTATCCAACAA+TGG | + | chr8.4:78362569-78362588 | MS.gene45437:CDS | 40.0% |
| !! | CGAGTTTTGATGGCAATTTC+GGG | + | chr8.4:78362531-78362550 | MS.gene45437:CDS | 40.0% |
| !! | CTAGAAAATGATGGTGGTGA+AGG | + | chr8.4:78361996-78362015 | MS.gene45437:CDS | 40.0% |
| !! | GCGAGTTTTGATGGCAATTT+CGG | + | chr8.4:78362530-78362549 | MS.gene45437:CDS | 40.0% |
| !! | TACTAGTGATGACTTGTTGG+AGG | + | chr8.4:78361962-78361981 | MS.gene45437:CDS | 40.0% |
| AATGTTGATCGGTCCCATGA+TGG | + | chr8.4:78362146-78362165 | MS.gene45437:CDS | 45.0% | |
| AGAAGAATGCTCCCCATCAT+GGG | - | chr8.4:78362162-78362181 | None:intergenic | 45.0% | |
| AGAGGGAGTAATTCCATTGC+AGG | + | chr8.4:78362725-78362744 | MS.gene45437:CDS | 45.0% | |
| AGGAGTGAACTGAATGTTCG+TGG | + | chr8.4:78362296-78362315 | MS.gene45437:CDS | 45.0% | |
| AGTGAACTGAATGTTCGTGG+TGG | + | chr8.4:78362299-78362318 | MS.gene45437:CDS | 45.0% | |
| ATCACAGTTGAACGAGAAGG+TGG | - | chr8.4:78361555-78361574 | None:intergenic | 45.0% | |
| ATGTTGATCGGTCCCATGAT+GGG | + | chr8.4:78362147-78362166 | MS.gene45437:CDS | 45.0% | |
| CCTAACAGCATCACCATTGT+TGG | - | chr8.4:78362585-78362604 | None:intergenic | 45.0% | |
| CGATTGCGAAAGAATGGGAA+TGG | + | chr8.4:78362104-78362123 | MS.gene45437:CDS | 45.0% | |
| CGTTCAACTGTGATCCGAAT+GGG | + | chr8.4:78361561-78361580 | MS.gene45437:CDS | 45.0% | |
| CTGGTGATATTAGATCGAGG+AGG | + | chr8.4:78362615-78362634 | MS.gene45437:CDS | 45.0% | |
| CTTCTGACAGAACACAGAGA+GGG | + | chr8.4:78362708-78362727 | MS.gene45437:CDS | 45.0% | |
| GAAAGAATGGGAATGGAAGG+AGG | + | chr8.4:78362111-78362130 | MS.gene45437:CDS | 45.0% | |
| GACCTTTGGACGGAAAATGA+TGG | + | chr8.4:78361849-78361868 | MS.gene45437:CDS | 45.0% | |
| GATAGGTTTCAGAAACCTGG+TGG | + | chr8.4:78361822-78361841 | MS.gene45437:CDS | 45.0% | |
| GATGCTAGAATGAGGAAGCA+CGG | + | chr8.4:78362425-78362444 | MS.gene45437:CDS | 45.0% | |
| GCAGTCGATTGCGAAAGAAT+GGG | + | chr8.4:78362099-78362118 | MS.gene45437:CDS | 45.0% | |
| GCTGATAGGTTTCAGAAACC+TGG | + | chr8.4:78361819-78361838 | MS.gene45437:CDS | 45.0% | |
| GGTGATGCTGTTAGGTCTAA+TGG | + | chr8.4:78362590-78362609 | MS.gene45437:CDS | 45.0% | |
| TAGCAGAAGGCAACTCATCA+GGG | - | chr8.4:78361893-78361912 | None:intergenic | 45.0% | |
| TCGTTCAACTGTGATCCGAA+TGG | + | chr8.4:78361560-78361579 | MS.gene45437:CDS | 45.0% | |
| TGACAGTTGTTGTACCACGT+TGG | - | chr8.4:78361448-78361467 | None:intergenic | 45.0% | |
| TGAGAAAGAACGGAAATGGG+AGG | + | chr8.4:78362225-78362244 | MS.gene45437:CDS | 45.0% | |
| TGCGAAAGAATGGGAATGGA+AGG | + | chr8.4:78362108-78362127 | MS.gene45437:CDS | 45.0% | |
| ! | ATGCTAGAATGAGGAAGCAC+GGG | + | chr8.4:78362426-78362445 | MS.gene45437:CDS | 45.0% |
| ! | CCAACAATGGTGATGCTGTT+AGG | + | chr8.4:78362582-78362601 | MS.gene45437:CDS | 45.0% |
| ! | GAATAAAGGGAGTGCAAGGA+GGG | + | chr8.4:78362553-78362572 | MS.gene45437:CDS | 45.0% |
| ! | GAATGTGTTATTCGCCAACG+TGG | + | chr8.4:78361431-78361450 | MS.gene45437:CDS | 45.0% |
| ! | GCTGTTAGGTCTAATGGATC+TGG | + | chr8.4:78362596-78362615 | MS.gene45437:CDS | 45.0% |
| ! | GTCCATCATTTTCCGTCCAA+AGG | - | chr8.4:78361854-78361873 | None:intergenic | 45.0% |
| ! | TGATGAGCAGCTCAAGGTTT+TGG | + | chr8.4:78361797-78361816 | MS.gene45437:CDS | 45.0% |
| ! | TTTTGCTACAGTGACCGTGA+GGG | - | chr8.4:78361532-78361551 | None:intergenic | 45.0% |
| !! | AGGAATGGAGCGAGTTTTGA+TGG | + | chr8.4:78362521-78362540 | MS.gene45437:CDS | 45.0% |
| !! | ATGATGGTGGTGAAGGGTAT+TGG | + | chr8.4:78362003-78362022 | MS.gene45437:CDS | 45.0% |
| !! | CGTGGTGGATTGAGAAAGAA+CGG | + | chr8.4:78362215-78362234 | MS.gene45437:CDS | 45.0% |
| !!! | AGCTCAAGGTTTTGGCTGAT+AGG | + | chr8.4:78361805-78361824 | MS.gene45437:CDS | 45.0% |
| AGCAACCTGACTCTACAAGC+TGG | + | chr8.4:78362873-78362892 | MS.gene45437:CDS | 50.0% | |
| AGCAGAAGGCAACTCATCAG+GGG | - | chr8.4:78361892-78361911 | None:intergenic | 50.0% | |
| CAAAGCTGATGAGCAGCTCA+AGG | + | chr8.4:78361791-78361810 | MS.gene45437:CDS | 50.0% | |
| CGGATCACAGTTGAACGAGA+AGG | - | chr8.4:78361558-78361577 | None:intergenic | 50.0% | |
| CTAGCAGAAGGCAACTCATC+AGG | - | chr8.4:78361894-78361913 | None:intergenic | 50.0% | |
| CTGATGAGTTGCCTTCTGCT+AGG | + | chr8.4:78361892-78361911 | MS.gene45437:CDS | 50.0% | |
| GAAAGAACGGAAATGGGAGG+AGG | + | chr8.4:78362228-78362247 | MS.gene45437:CDS | 50.0% | |
| GAAGGCCAAGCAACTCTTGA+AGG | + | chr8.4:78361647-78361666 | MS.gene45437:CDS | 50.0% | |
| GAGAAGAATGCTCCCCATCA+TGG | - | chr8.4:78362163-78362182 | None:intergenic | 50.0% | |
| GCTTCTGACAGAACACAGAG+AGG | + | chr8.4:78362707-78362726 | MS.gene45437:CDS | 50.0% | |
| GGAGTAATTCCATTGCAGGC+AGG | + | chr8.4:78362729-78362748 | MS.gene45437:CDS | 50.0% | |
| GGCAGTCGATTGCGAAAGAA+TGG | + | chr8.4:78362098-78362117 | MS.gene45437:CDS | 50.0% | |
| GGGTCTAATGGGATGTATGC+AGG | + | chr8.4:78362677-78362696 | MS.gene45437:CDS | 50.0% | |
| GTTCTTCTCCTTCACATGCG+AGG | + | chr8.4:78362501-78362520 | MS.gene45437:CDS | 50.0% | |
| TCAACTGTGATCCGAATGGG+TGG | + | chr8.4:78361564-78361583 | MS.gene45437:CDS | 50.0% | |
| TCCATATCTCCTGCCTGCAA+TGG | - | chr8.4:78362741-78362760 | None:intergenic | 50.0% | |
| TCCATTGCAGGCAGGAGATA+TGG | + | chr8.4:78362737-78362756 | MS.gene45437:CDS | 50.0% | |
| TCTCCTTCACATGCGAGGAA+TGG | + | chr8.4:78362506-78362525 | MS.gene45437:CDS | 50.0% | |
| TGTTGATCGGTCCCATGATG+GGG | + | chr8.4:78362148-78362167 | MS.gene45437:CDS | 50.0% | |
| ! | ACGGAAATGGGAGGAGGTAT+CGG | + | chr8.4:78362234-78362253 | MS.gene45437:CDS | 50.0% |
| ! | AGAATGAGGAAGCACGGGAA+TGG | + | chr8.4:78362431-78362450 | MS.gene45437:CDS | 50.0% |
| ! | CAAGAGTTGCTTGGCCTTCT+TGG | - | chr8.4:78361646-78361665 | None:intergenic | 50.0% |
| ! | GATGTTCATGATGGTGAGGG+TGG | + | chr8.4:78362032-78362051 | MS.gene45437:CDS | 50.0% |
| ! | GGAATAAAGGGAGTGCAAGG+AGG | + | chr8.4:78362552-78362571 | MS.gene45437:CDS | 50.0% |
| ! | GTTTTGCTACAGTGACCGTG+AGG | - | chr8.4:78361533-78361552 | None:intergenic | 50.0% |
| ! | TCAGGGGTTTGAAACAACCG+TGG | - | chr8.4:78361876-78361895 | None:intergenic | 50.0% |
| ! | TCCAAAGGGTGTAGATGGGT+CGG | + | chr8.4:78362466-78362485 | MS.gene45437:CDS | 50.0% |
| ! | TCGGGAATAAAGGGAGTGCA+AGG | + | chr8.4:78362549-78362568 | MS.gene45437:CDS | 50.0% |
| !! | AACCTGGTGGGTTTGACCTT+TGG | + | chr8.4:78361835-78361854 | MS.gene45437:CDS | 50.0% |
| !! | AGGAGGTATCGGTCCAATGA+TGG | + | chr8.4:78362245-78362264 | MS.gene45437:CDS | 50.0% |
| !! | GAGGTATCGGTCCAATGATG+GGG | + | chr8.4:78362247-78362266 | MS.gene45437:CDS | 50.0% |
| !! | GGACGGAAAATGATGGACCA+CGG | + | chr8.4:78361856-78361875 | MS.gene45437:CDS | 50.0% |
| !! | GGAGGTATCGGTCCAATGAT+GGG | + | chr8.4:78362246-78362265 | MS.gene45437:CDS | 50.0% |
| !! | TGGTGGGTTTGACCTTTGGA+CGG | + | chr8.4:78361839-78361858 | MS.gene45437:CDS | 50.0% |
| ACTGTGATCCGAATGGGTGG+TGG | + | chr8.4:78361567-78361586 | MS.gene45437:CDS | 55.0% | |
| AGATCGAGGAGGAAGGAGAG+TGG | + | chr8.4:78362626-78362645 | MS.gene45437:CDS | 55.0% | |
| AGGCCTCTCCAACTCAGAGA+CGG | - | chr8.4:78361733-78361752 | None:intergenic | 55.0% | |
| CAGGAATGTGCTGTCCCTCA+CGG | + | chr8.4:78361515-78361534 | MS.gene45437:CDS | 55.0% | |
| CATACGCTTCCACTGCCACT+TGG | - | chr8.4:78361619-78361638 | None:intergenic | 55.0% | |
| CTGTGATCCGAATGGGTGGT+GGG | + | chr8.4:78361568-78361587 | MS.gene45437:CDS | 55.0% | |
| GAAGCGTATGCAGGCCAAGA+AGG | + | chr8.4:78361629-78361648 | MS.gene45437:CDS | 55.0% | |
| GCTCCATTCCTCGCATGTGA+AGG | - | chr8.4:78362512-78362531 | None:intergenic | 55.0% | |
| GGAGGAAGGAGAGTGGAAAG+AGG | + | chr8.4:78362633-78362652 | MS.gene45437:CDS | 55.0% | |
| GGGAGGAATGAAGCGAGTGT+TGG | + | chr8.4:78362077-78362096 | MS.gene45437:CDS | 55.0% | |
| GTCCAAAGGTCAAACCCACC+AGG | - | chr8.4:78361840-78361859 | None:intergenic | 55.0% | |
| TCCGACCCATCTACACCCTT+TGG | - | chr8.4:78362470-78362489 | None:intergenic | 55.0% | |
| TCGCGCCTTCAAGAGTTGCT+TGG | - | chr8.4:78361655-78361674 | None:intergenic | 55.0% | |
| ! | CTCTGAGTTGGAGAGGCCTT+GGG | + | chr8.4:78361734-78361753 | MS.gene45437:CDS | 55.0% |
| ! | TCTCTGAGTTGGAGAGGCCT+TGG | + | chr8.4:78361733-78361752 | MS.gene45437:CDS | 55.0% |
| ! | TGAGGAAGCACGGGAATGGA+AGG | + | chr8.4:78362435-78362454 | MS.gene45437:CDS | 55.0% |
| CAAGGCTGCCGTCTCTGAGT+TGG | + | chr8.4:78361722-78361741 | MS.gene45437:CDS | 60.0% | |
| GAGGAAGAGGGCTGAGCTCA+AGG | + | chr8.4:78361704-78361723 | MS.gene45437:CDS | 60.0% | |
| GGCTTCTCAACCACCTCCCA+AGG | - | chr8.4:78361753-78361772 | None:intergenic | 60.0% | |
| TCCTTGGCCCACCACCCATT+CGG | - | chr8.4:78361578-78361597 | None:intergenic | 60.0% | |
| ! | CTGCCGTCTCTGAGTTGGAG+AGG | + | chr8.4:78361727-78361746 | MS.gene45437:CDS | 60.0% |
| ! | GTGGCAGTGGAAGCGTATGC+AGG | + | chr8.4:78361620-78361639 | MS.gene45437:CDS | 60.0% |
| ! | TCTTGAAGGCGCGACTGTGC+CGG | + | chr8.4:78361661-78361680 | MS.gene45437:CDS | 60.0% |
| ! | TGAGTTGGAGAGGCCTTGGG+AGG | + | chr8.4:78361737-78361756 | MS.gene45437:CDS | 60.0% |
| GTTGGAGAGGCCTTGGGAGG+TGG | + | chr8.4:78361740-78361759 | MS.gene45437:CDS | 65.0% | |
| ! | CTTGAAGGCGCGACTGTGCC+GGG | + | chr8.4:78361662-78361681 | MS.gene45437:CDS | 65.0% |
| ! | GTGGGGTGTCCAAGTGGCAG+TGG | + | chr8.4:78361607-78361626 | MS.gene45437:CDS | 65.0% |
| ! | TGCCACTTGGACACCCCACC+CGG | - | chr8.4:78361606-78361625 | None:intergenic | 65.0% |
| ! | TGGTGGGCCAAGGACGTACC+CGG | + | chr8.4:78361584-78361603 | MS.gene45437:CDS | 65.0% |
| !! | TCCGAATGGGTGGTGGGCCA+AGG | + | chr8.4:78361574-78361593 | MS.gene45437:CDS | 65.0% |
| ACCCCACCCGGGTACGTCCT+TGG | - | chr8.4:78361594-78361613 | None:intergenic | 70.0% | |
| GCCAAGGACGTACCCGGGTG+GGG | + | chr8.4:78361590-78361609 | MS.gene45437:CDS | 70.0% | |
| GCCACTTGGACACCCCACCC+GGG | - | chr8.4:78361605-78361624 | None:intergenic | 70.0% | |
| GGCCAAGGACGTACCCGGGT+GGG | + | chr8.4:78361589-78361608 | MS.gene45437:CDS | 70.0% | |
| GGTGGGCCAAGGACGTACCC+GGG | + | chr8.4:78361585-78361604 | MS.gene45437:CDS | 70.0% | |
| ! | ACCCGGGTGGGGTGTCCAAG+TGG | + | chr8.4:78361601-78361620 | MS.gene45437:CDS | 70.0% |
| AGGCGCGACTGTGCCGGGAG+CGG | + | chr8.4:78361667-78361686 | MS.gene45437:CDS | 75.0% | |
| GGGCCAAGGACGTACCCGGG+TGG | + | chr8.4:78361588-78361607 | MS.gene45437:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 78361429 | 78362898 | 78361429 | ID=MS.gene45437 |
| chr8.4 | mRNA | 78361429 | 78362898 | 78361429 | ID=MS.gene45437.t1;Parent=MS.gene45437 |
| chr8.4 | exon | 78361429 | 78362898 | 78361429 | ID=MS.gene45437.t1.exon1;Parent=MS.gene45437.t1 |
| chr8.4 | CDS | 78361429 | 78362898 | 78361429 | ID=cds.MS.gene45437.t1;Parent=MS.gene45437.t1 |
| Gene Sequence |
| Protein sequence |
