Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053577.t1 | XP_003608391.2 | 95.8 | 708 | 21 | 3 | 1 | 699 | 1 | 708 | 0.00E+00 | 1211.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053577.t1 | Q93YW0 | 53.2 | 709 | 287 | 8 | 7 | 698 | 3 | 683 | 2.4e-178 | 627.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053577.t1 | G7JV40 | 95.8 | 708 | 21 | 3 | 1 | 699 | 1 | 708 | 0.0e+00 | 1211.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene053577 | 0.8004 | 1.47E-48 | -1.69E-46 |
MS.gene049758 | MS.gene053577 | 0.808796 | 2.60E-50 | -1.69E-46 |
MS.gene050226 | MS.gene053577 | 0.822853 | 1.90E-53 | -1.69E-46 |
MS.gene050227 | MS.gene053577 | 0.812332 | 4.47E-51 | -1.69E-46 |
MS.gene050228 | MS.gene053577 | 0.801581 | 8.42E-49 | -1.69E-46 |
MS.gene050301 | MS.gene053577 | 0.813977 | 1.95E-51 | -1.69E-46 |
MS.gene050762 | MS.gene053577 | 0.810301 | 1.23E-50 | -1.69E-46 |
MS.gene050763 | MS.gene053577 | 0.812017 | 5.24E-51 | -1.69E-46 |
MS.gene052188 | MS.gene053577 | 0.819231 | 1.29E-52 | -1.69E-46 |
MS.gene053559 | MS.gene053577 | 0.829254 | 5.70E-55 | -1.69E-46 |
MS.gene053577 | MS.gene053836 | 0.821632 | 3.64E-53 | -1.69E-46 |
MS.gene053577 | MS.gene054379 | 0.816205 | 6.24E-52 | -1.69E-46 |
MS.gene053577 | MS.gene054542 | 0.820718 | 5.92E-53 | -1.69E-46 |
MS.gene053577 | MS.gene054930 | 0.857603 | 1.46E-62 | -1.69E-46 |
MS.gene053577 | MS.gene056659 | 0.801294 | 9.64E-49 | -1.69E-46 |
MS.gene053577 | MS.gene057450 | 0.80623 | 9.10E-50 | -1.69E-46 |
MS.gene053577 | MS.gene057469 | 0.813831 | 2.10E-51 | -1.69E-46 |
MS.gene053577 | MS.gene057929 | 0.812718 | 3.68E-51 | -1.69E-46 |
MS.gene053577 | MS.gene058949 | 0.822684 | 2.08E-53 | -1.69E-46 |
MS.gene053577 | MS.gene060495 | 0.836378 | 9.70E-57 | -1.69E-46 |
MS.gene053577 | MS.gene060943 | 0.801417 | 9.09E-49 | -1.69E-46 |
MS.gene053577 | MS.gene061476 | 0.803085 | 4.12E-49 | -1.69E-46 |
MS.gene053577 | MS.gene063074 | 0.824729 | 6.89E-54 | -1.69E-46 |
MS.gene053577 | MS.gene065164 | 0.803953 | 2.73E-49 | -1.69E-46 |
MS.gene053577 | MS.gene065581 | 0.808001 | 3.84E-50 | -1.69E-46 |
MS.gene053577 | MS.gene06652 | 0.805294 | 1.43E-49 | -1.69E-46 |
MS.gene053577 | MS.gene066716 | 0.800963 | 1.13E-48 | -1.69E-46 |
MS.gene053577 | MS.gene067321 | 0.829155 | 6.03E-55 | -1.69E-46 |
MS.gene053577 | MS.gene067552 | 0.801348 | 9.40E-49 | -1.69E-46 |
MS.gene053577 | MS.gene067553 | 0.801575 | 8.44E-49 | -1.69E-46 |
MS.gene053577 | MS.gene068026 | 0.885912 | 5.40E-72 | -1.69E-46 |
MS.gene053577 | MS.gene068045 | 0.848654 | 5.34E-60 | -1.69E-46 |
MS.gene053577 | MS.gene069681 | 0.806243 | 9.04E-50 | -1.69E-46 |
MS.gene053577 | MS.gene06990 | 0.822134 | 2.79E-53 | -1.69E-46 |
MS.gene053577 | MS.gene070491 | 0.832094 | 1.15E-55 | -1.69E-46 |
MS.gene053577 | MS.gene070790 | 0.808579 | 2.89E-50 | -1.69E-46 |
MS.gene053577 | MS.gene071407 | 0.80504 | 1.62E-49 | -1.69E-46 |
MS.gene053577 | MS.gene073340 | -0.803604 | 3.22E-49 | -1.69E-46 |
MS.gene053577 | MS.gene073926 | 0.804167 | 2.46E-49 | -1.69E-46 |
MS.gene053577 | MS.gene07619 | 0.807435 | 5.06E-50 | -1.69E-46 |
MS.gene053577 | MS.gene09136 | 0.810713 | 1.01E-50 | -1.69E-46 |
MS.gene053577 | MS.gene09558 | 0.81253 | 4.05E-51 | -1.69E-46 |
MS.gene053577 | MS.gene09617 | 0.806193 | 9.27E-50 | -1.69E-46 |
MS.gene053577 | MS.gene09668 | 0.819529 | 1.11E-52 | -1.69E-46 |
MS.gene053577 | MS.gene20315 | 0.83207 | 1.17E-55 | -1.69E-46 |
MS.gene053577 | MS.gene21136 | 0.809379 | 1.95E-50 | -1.69E-46 |
MS.gene053577 | MS.gene22689 | 0.800209 | 1.60E-48 | -1.69E-46 |
MS.gene053577 | MS.gene22967 | 0.827246 | 1.74E-54 | -1.69E-46 |
MS.gene053577 | MS.gene23318 | 0.83188 | 1.30E-55 | -1.69E-46 |
MS.gene053577 | MS.gene24158 | 0.804852 | 1.77E-49 | -1.69E-46 |
MS.gene053577 | MS.gene24730 | 0.813411 | 2.59E-51 | -1.69E-46 |
MS.gene053577 | MS.gene25859 | 0.80953 | 1.81E-50 | -1.69E-46 |
MS.gene053577 | MS.gene25947 | 0.817233 | 3.67E-52 | -1.69E-46 |
MS.gene053577 | MS.gene26485 | 0.821118 | 4.79E-53 | -1.69E-46 |
MS.gene053577 | MS.gene26990 | 0.831502 | 1.61E-55 | -1.69E-46 |
MS.gene053577 | MS.gene27008 | 0.810689 | 1.02E-50 | -1.69E-46 |
MS.gene053577 | MS.gene27217 | 0.804522 | 2.08E-49 | -1.69E-46 |
MS.gene053577 | MS.gene27501 | 0.811518 | 6.72E-51 | -1.69E-46 |
MS.gene053577 | MS.gene27530 | 0.805235 | 1.47E-49 | -1.69E-46 |
MS.gene053577 | MS.gene28693 | 0.816553 | 5.21E-52 | -1.69E-46 |
MS.gene053577 | MS.gene28694 | 0.836793 | 7.60E-57 | -1.69E-46 |
MS.gene053577 | MS.gene29986 | 0.860243 | 2.37E-63 | -1.69E-46 |
MS.gene053577 | MS.gene31035 | 0.815753 | 7.87E-52 | -1.69E-46 |
MS.gene053577 | MS.gene31116 | 0.808109 | 3.64E-50 | -1.69E-46 |
MS.gene053577 | MS.gene31609 | 0.819493 | 1.13E-52 | -1.69E-46 |
MS.gene053577 | MS.gene31671 | 0.816263 | 6.05E-52 | -1.69E-46 |
MS.gene053577 | MS.gene31809 | 0.804003 | 2.66E-49 | -1.69E-46 |
MS.gene053577 | MS.gene32892 | 0.82735 | 1.64E-54 | -1.69E-46 |
MS.gene053577 | MS.gene32894 | 0.834062 | 3.73E-56 | -1.69E-46 |
MS.gene053577 | MS.gene34187 | 0.804896 | 1.73E-49 | -1.69E-46 |
MS.gene053577 | MS.gene34800 | 0.813937 | 1.99E-51 | -1.69E-46 |
MS.gene053577 | MS.gene37910 | 0.80096 | 1.13E-48 | -1.69E-46 |
MS.gene053577 | MS.gene39336 | 0.831191 | 1.92E-55 | -1.69E-46 |
MS.gene053577 | MS.gene39338 | 0.82256 | 2.22E-53 | -1.69E-46 |
MS.gene053577 | MS.gene40169 | 0.820008 | 8.61E-53 | -1.69E-46 |
MS.gene053577 | MS.gene42831 | 0.826176 | 3.13E-54 | -1.69E-46 |
MS.gene053577 | MS.gene43767 | 0.814716 | 1.34E-51 | -1.69E-46 |
MS.gene053577 | MS.gene43782 | 0.827367 | 1.63E-54 | -1.69E-46 |
MS.gene053577 | MS.gene43919 | 0.807403 | 5.14E-50 | -1.69E-46 |
MS.gene053577 | MS.gene43954 | 0.822187 | 2.71E-53 | -1.69E-46 |
MS.gene053577 | MS.gene44868 | 0.822715 | 2.04E-53 | -1.69E-46 |
MS.gene053577 | MS.gene44876 | 0.80803 | 3.78E-50 | -1.69E-46 |
MS.gene053577 | MS.gene45108 | 0.808896 | 2.47E-50 | -1.69E-46 |
MS.gene053577 | MS.gene45170 | 0.813322 | 2.71E-51 | -1.69E-46 |
MS.gene053577 | MS.gene45171 | 0.820682 | 6.03E-53 | -1.69E-46 |
MS.gene053577 | MS.gene45434 | 0.818747 | 1.67E-52 | -1.69E-46 |
MS.gene053577 | MS.gene45437 | 0.806504 | 7.97E-50 | -1.69E-46 |
MS.gene053577 | MS.gene45727 | 0.812984 | 3.22E-51 | -1.69E-46 |
MS.gene053577 | MS.gene49610 | 0.806272 | 8.92E-50 | -1.69E-46 |
MS.gene053577 | MS.gene50436 | 0.825977 | 3.49E-54 | -1.69E-46 |
MS.gene053577 | MS.gene51182 | 0.802539 | 5.35E-49 | -1.69E-46 |
MS.gene053577 | MS.gene52512 | 0.830035 | 3.68E-55 | -1.69E-46 |
MS.gene053577 | MS.gene53001 | 0.819931 | 8.96E-53 | -1.69E-46 |
MS.gene053577 | MS.gene53143 | 0.801174 | 1.02E-48 | -1.69E-46 |
MS.gene053577 | MS.gene55505 | 0.811659 | 6.27E-51 | -1.69E-46 |
MS.gene053577 | MS.gene56053 | 0.800016 | 1.76E-48 | -1.69E-46 |
MS.gene053577 | MS.gene57321 | 0.801127 | 1.04E-48 | -1.69E-46 |
MS.gene053577 | MS.gene57565 | 0.807087 | 6.00E-50 | -1.69E-46 |
MS.gene053577 | MS.gene57566 | 0.811058 | 8.47E-51 | -1.69E-46 |
MS.gene053577 | MS.gene57643 | 0.814875 | 1.23E-51 | -1.69E-46 |
MS.gene053577 | MS.gene57920 | 0.805736 | 1.16E-49 | -1.69E-46 |
MS.gene053577 | MS.gene58570 | 0.820672 | 6.06E-53 | -1.69E-46 |
MS.gene053577 | MS.gene58676 | 0.828724 | 7.67E-55 | -1.69E-46 |
MS.gene053577 | MS.gene59149 | 0.838566 | 2.66E-57 | -1.69E-46 |
MS.gene053577 | MS.gene59730 | 0.810496 | 1.12E-50 | -1.69E-46 |
MS.gene053577 | MS.gene61139 | 0.801258 | 9.80E-49 | -1.69E-46 |
MS.gene053577 | MS.gene61686 | 0.825438 | 4.69E-54 | -1.69E-46 |
MS.gene053577 | MS.gene61701 | 0.814852 | 1.25E-51 | -1.69E-46 |
MS.gene053577 | MS.gene62169 | 0.801916 | 7.18E-49 | -1.69E-46 |
MS.gene053577 | MS.gene62623 | 0.821643 | 3.62E-53 | -1.69E-46 |
MS.gene053577 | MS.gene63507 | 0.818422 | 1.98E-52 | -1.69E-46 |
MS.gene053577 | MS.gene64621 | 0.818471 | 1.93E-52 | -1.69E-46 |
MS.gene053577 | MS.gene64994 | 0.821432 | 4.05E-53 | -1.69E-46 |
MS.gene053577 | MS.gene65665 | 0.804242 | 2.37E-49 | -1.69E-46 |
MS.gene053577 | MS.gene66884 | 0.808395 | 3.16E-50 | -1.69E-46 |
MS.gene053577 | MS.gene66892 | 0.816927 | 4.30E-52 | -1.69E-46 |
MS.gene053577 | MS.gene68122 | 0.80404 | 2.61E-49 | -1.69E-46 |
MS.gene053577 | MS.gene68168 | 0.800831 | 1.20E-48 | -1.69E-46 |
MS.gene053577 | MS.gene68723 | 0.820333 | 7.25E-53 | -1.69E-46 |
MS.gene053577 | MS.gene68874 | 0.819973 | 8.76E-53 | -1.69E-46 |
MS.gene053577 | MS.gene68875 | 0.802231 | 6.19E-49 | -1.69E-46 |
MS.gene053577 | MS.gene68877 | 0.810449 | 1.15E-50 | -1.69E-46 |
MS.gene053577 | MS.gene68959 | 0.81941 | 1.18E-52 | -1.69E-46 |
MS.gene053577 | MS.gene68963 | 0.822559 | 2.22E-53 | -1.69E-46 |
MS.gene053577 | MS.gene69027 | 0.817055 | 4.02E-52 | -1.69E-46 |
MS.gene053577 | MS.gene69794 | 0.810983 | 8.79E-51 | -1.69E-46 |
MS.gene053577 | MS.gene70101 | 0.879038 | 1.73E-69 | -1.69E-46 |
MS.gene053577 | MS.gene70102 | 0.879169 | 1.55E-69 | -1.69E-46 |
MS.gene053577 | MS.gene70337 | 0.800916 | 1.15E-48 | -1.69E-46 |
MS.gene053577 | MS.gene70819 | 0.818073 | 2.37E-52 | -1.69E-46 |
MS.gene053577 | MS.gene71024 | 0.802313 | 5.95E-49 | -1.69E-46 |
MS.gene053577 | MS.gene71450 | 0.8146 | 1.42E-51 | -1.69E-46 |
MS.gene053577 | MS.gene71456 | 0.848407 | 6.25E-60 | -1.69E-46 |
MS.gene053577 | MS.gene72242 | 0.809785 | 1.59E-50 | -1.69E-46 |
MS.gene053577 | MS.gene74922 | 0.822293 | 2.56E-53 | -1.69E-46 |
MS.gene053577 | MS.gene75493 | 0.833376 | 5.53E-56 | -1.69E-46 |
MS.gene053577 | MS.gene75614 | 0.814951 | 1.19E-51 | -1.69E-46 |
MS.gene053577 | MS.gene76554 | 0.830434 | 2.94E-55 | -1.69E-46 |
MS.gene053577 | MS.gene78205 | 0.813471 | 2.52E-51 | -1.69E-46 |
MS.gene053577 | MS.gene78321 | 0.803293 | 3.74E-49 | -1.69E-46 |
MS.gene053577 | MS.gene79020 | 0.802149 | 6.43E-49 | -1.69E-46 |
MS.gene053577 | MS.gene79290 | 0.800846 | 1.19E-48 | -1.69E-46 |
MS.gene053577 | MS.gene79479 | 0.810503 | 1.12E-50 | -1.69E-46 |
MS.gene053577 | MS.gene79846 | 0.817067 | 4.00E-52 | -1.69E-46 |
MS.gene053577 | MS.gene80157 | 0.800361 | 1.49E-48 | -1.69E-46 |
MS.gene053577 | MS.gene80298 | 0.860348 | 2.20E-63 | -1.69E-46 |
MS.gene053577 | MS.gene81388 | 0.80164 | 8.18E-49 | -1.69E-46 |
MS.gene053577 | MS.gene81602 | 0.81155 | 6.62E-51 | -1.69E-46 |
MS.gene053577 | MS.gene83132 | 0.820377 | 7.08E-53 | -1.69E-46 |
MS.gene053577 | MS.gene84401 | 0.817545 | 3.12E-52 | -1.69E-46 |
MS.gene053577 | MS.gene84523 | 0.852687 | 3.92E-61 | -1.69E-46 |
MS.gene053577 | MS.gene85253 | 0.811975 | 5.35E-51 | -1.69E-46 |
MS.gene053577 | MS.gene86055 | 0.801045 | 1.08E-48 | -1.69E-46 |
MS.gene053577 | MS.gene87170 | 0.858401 | 8.45E-63 | -1.69E-46 |
MS.gene053577 | MS.gene88755 | 0.823458 | 1.37E-53 | -1.69E-46 |
MS.gene053577 | MS.gene88768 | 0.805012 | 1.64E-49 | -1.69E-46 |
MS.gene053577 | MS.gene89434 | 0.808681 | 2.75E-50 | -1.69E-46 |
MS.gene053577 | MS.gene90199 | 0.849433 | 3.24E-60 | -1.69E-46 |
MS.gene053577 | MS.gene90219 | 0.903183 | 4.51E-79 | -1.69E-46 |
MS.gene053577 | MS.gene91509 | 0.818538 | 1.86E-52 | -1.69E-46 |
MS.gene053577 | MS.gene91547 | 0.801381 | 9.25E-49 | -1.69E-46 |
MS.gene053577 | MS.gene91645 | 0.833632 | 4.77E-56 | -1.69E-46 |
MS.gene053577 | MS.gene92764 | 0.802768 | 4.80E-49 | -1.69E-46 |
MS.gene053577 | MS.gene92791 | 0.805115 | 1.56E-49 | -1.69E-46 |
MS.gene053577 | MS.gene93887 | 0.83167 | 1.46E-55 | -1.69E-46 |
MS.gene053577 | MS.gene93890 | 0.822322 | 2.52E-53 | -1.69E-46 |
MS.gene053577 | MS.gene93892 | 0.821661 | 3.59E-53 | -1.69E-46 |
MS.gene053577 | MS.gene94304 | 0.840683 | 7.50E-58 | -1.69E-46 |
MS.gene053577 | MS.gene94333 | 0.80116 | 1.03E-48 | -1.69E-46 |
MS.gene053577 | MS.gene95147 | 0.804502 | 2.09E-49 | -1.69E-46 |
MS.gene053577 | MS.gene96220 | 0.816949 | 4.25E-52 | -1.69E-46 |
MS.gene053577 | MS.gene96799 | 0.821341 | 4.25E-53 | -1.69E-46 |
MS.gene053577 | MS.gene97224 | 0.817006 | 4.12E-52 | -1.69E-46 |
MS.gene053577 | MS.gene97270 | 0.821447 | 4.02E-53 | -1.69E-46 |
MS.gene053577 | MS.gene99375 | 0.803602 | 3.22E-49 | -1.69E-46 |
MS.gene053577 | MS.gene99466 | 0.804886 | 1.74E-49 | -1.69E-46 |
MS.gene053577 | MS.gene99802 | 0.809742 | 1.63E-50 | -1.69E-46 |
MS.gene053577 | MS.gene99806 | 0.808937 | 2.42E-50 | -1.69E-46 |
MS.gene053577 | MS.gene99877 | 0.807337 | 5.31E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053577.t1 | MTR_4g093590 | 95.339 | 708 | 24 | 3 | 1 | 699 | 1 | 708 | 0.0 | 1305 |
MS.gene053577.t1 | MTR_3g078020 | 40.354 | 622 | 308 | 16 | 90 | 697 | 56 | 628 | 8.87e-137 | 416 |
MS.gene053577.t1 | MTR_4g106950 | 29.268 | 205 | 118 | 7 | 142 | 335 | 11 | 199 | 2.41e-13 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053577.t1 | AT4G33630 | 51.821 | 714 | 293 | 11 | 5 | 698 | 1 | 683 | 0.0 | 641 |
MS.gene053577.t1 | AT4G33630 | 51.821 | 714 | 293 | 11 | 5 | 698 | 1 | 683 | 0.0 | 641 |
MS.gene053577.t1 | AT4G33630 | 51.821 | 714 | 293 | 11 | 5 | 698 | 1 | 683 | 0.0 | 641 |
MS.gene053577.t1 | AT1G27510 | 37.896 | 599 | 321 | 10 | 109 | 697 | 92 | 649 | 1.67e-115 | 362 |
Find 179 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCTATCATCACCACTTTC+TGG | 0.125978 | 4.4:-21364984 | None:intergenic |
AAGAAGAAAATCACCATTTA+AGG | 0.161337 | 4.4:-21365872 | None:intergenic |
GGCATAATTCCTGAAGAATT+TGG | 0.184513 | 4.4:+21367826 | MS.gene053577:CDS |
ACTTCATTTGATCCCTTAAA+TGG | 0.216277 | 4.4:+21365859 | MS.gene053577:CDS |
CAGAATCATCAACCATTATC+TGG | 0.244294 | 4.4:+21365805 | MS.gene053577:CDS |
GGAAAATGATACAGAAATTC+TGG | 0.265547 | 4.4:+21365247 | MS.gene053577:CDS |
TTGCAGGTGGGTTGGTGGGC+TGG | 0.268886 | 4.4:+21361220 | MS.gene053577:intron |
TTTCAACCAGGCTTATATAT+TGG | 0.280789 | 4.4:+21366003 | MS.gene053577:intron |
AGTGAGGATGAAGATGAAAA+TGG | 0.294516 | 4.4:+21365167 | MS.gene053577:CDS |
CTGTTGTTGGATTTGTGTAT+TGG | 0.301064 | 4.4:+21368248 | MS.gene053577:CDS |
AATACTTAGCCAACCTTTGC+AGG | 0.302638 | 4.4:-21365629 | None:intergenic |
TTTCAGATTGCTCGCTATAA+AGG | 0.326758 | 4.4:+21368023 | MS.gene053577:intron |
AGATCCTTGTCTACTTTCTC+TGG | 0.328873 | 4.4:-21365104 | None:intergenic |
TGTTGTTGGATTTGTGTATT+GGG | 0.328933 | 4.4:+21368249 | MS.gene053577:CDS |
AAAATCGTTGACCCAGATAA+TGG | 0.344302 | 4.4:-21365817 | None:intergenic |
TCTGATCTTGCAAAATTCAT+TGG | 0.354439 | 4.4:+21365593 | MS.gene053577:CDS |
GTAGAAGCCTTGAAAATAAC+CGG | 0.354442 | 4.4:+21366135 | MS.gene053577:CDS |
GATAAATCAATTAAGTTTCA+AGG | 0.355553 | 4.4:+21365545 | MS.gene053577:CDS |
ATCTCTAGGGGATAAATTGC+TGG | 0.365355 | 4.4:-21365411 | None:intergenic |
GATGAAGATTTCCCTTTGTC+AGG | 0.367167 | 4.4:-21365521 | None:intergenic |
CATACCACTCCAAATTCTTC+AGG | 0.377189 | 4.4:-21367835 | None:intergenic |
ATGGTTTAGAGGACGTTGTT+GGG | 0.389821 | 4.4:-21364884 | None:intergenic |
AGACAAGGATCTAATGTCTA+AGG | 0.398730 | 4.4:+21365115 | MS.gene053577:CDS |
GAAGGAAGATTGGCAGAGCC+AGG | 0.415294 | 4.4:+21368047 | MS.gene053577:CDS |
TGATACAGAAATTCTGGATC+TGG | 0.416518 | 4.4:+21365253 | MS.gene053577:CDS |
ATTCTTATATGAACTTGCTT+AGG | 0.420300 | 4.4:+21359638 | MS.gene053577:CDS |
ACCTGGCCAGCTGGTACATA+AGG | 0.421124 | 4.4:-21366162 | None:intergenic |
ACTAGCATCCAATGGTTTAG+AGG | 0.421647 | 4.4:-21364895 | None:intergenic |
GACCCTGCTGAGGGAATACC+TGG | 0.424681 | 4.4:+21365017 | MS.gene053577:CDS |
GGCGAACTGGTGATTCTTGA+TGG | 0.429087 | 4.4:+21368095 | MS.gene053577:CDS |
GGCTCTTGCAGGTGGGTTGG+TGG | 0.429195 | 4.4:+21361215 | MS.gene053577:intron |
GAAGGGAAGGGCGTTTGAGA+GGG | 0.435801 | 4.4:-21359471 | None:intergenic |
ATGGTTGATGATTCTGAGCC+TGG | 0.437377 | 4.4:-21365798 | None:intergenic |
GCTTCGAGTTCCTGCTAAGC+TGG | 0.437447 | 4.4:+21365436 | MS.gene053577:CDS |
GTCTTGAAAGATATGATTCC+TGG | 0.440863 | 4.4:+21365050 | MS.gene053577:CDS |
CAGAATCCTCGATGGGTTGA+CGG | 0.441475 | 4.4:+21368074 | MS.gene053577:CDS |
ACTGATCAAGAGGGAGATGA+TGG | 0.443283 | 4.4:+21365293 | MS.gene053577:CDS |
ATTCAAATGAGACGTAGATA+TGG | 0.444516 | 4.4:+21366054 | MS.gene053577:CDS |
TCCTTATGTACCAGCTGGCC+AGG | 0.445356 | 4.4:+21366161 | MS.gene053577:CDS |
GCCACGTATCTTCCATGCTC+TGG | 0.445672 | 4.4:-21361292 | None:intergenic |
ATAAAAGCAGGGCCTGTTGT+TGG | 0.449972 | 4.4:+21368235 | MS.gene053577:CDS |
TGAAGAAGCTGCCAAGCTTA+AGG | 0.453306 | 4.4:+21360375 | MS.gene053577:CDS |
GTTGAGAAGGGAAGTGAAGA+AGG | 0.453474 | 4.4:-21359489 | None:intergenic |
GTGATGTTCACGATGATGAT+TGG | 0.453507 | 4.4:+21359689 | MS.gene053577:CDS |
TTAAGAGATAAAGCGGGTGC+TGG | 0.455448 | 4.4:+21360636 | MS.gene053577:CDS |
GCGTTTGAGAGGGAAGGTTG+TGG | 0.456921 | 4.4:-21359461 | None:intergenic |
CAGCTAACAATGACAGTGTT+GGG | 0.460581 | 4.4:+21360413 | MS.gene053577:CDS |
GGGTACCAACTTCCACATAA+AGG | 0.460668 | 4.4:+21367805 | MS.gene053577:CDS |
GCTCTTGCAGGTGGGTTGGT+GGG | 0.465325 | 4.4:+21361216 | MS.gene053577:intron |
TCCTGCTAAGCTGGAGATCA+AGG | 0.467768 | 4.4:+21365445 | MS.gene053577:CDS |
TCCTTGATCTCCAGCTTAGC+AGG | 0.470115 | 4.4:-21365446 | None:intergenic |
GTGGCATTTCGTGCAAAAGT+TGG | 0.472710 | 4.4:+21367778 | MS.gene053577:CDS |
ATTGTGATAAATAGTGATCT+TGG | 0.474745 | 4.4:+21365317 | MS.gene053577:CDS |
TTCAAGACATTCTGAAATCC+AGG | 0.474941 | 4.4:-21365035 | None:intergenic |
CATCGAGGATTCTGAAACCC+TGG | 0.475587 | 4.4:-21368065 | None:intergenic |
GGTGATTGAAGAATTATTTG+AGG | 0.478893 | 4.4:+21365136 | MS.gene053577:CDS |
CATGATATTACCTGGCCAGC+TGG | 0.478968 | 4.4:-21366171 | None:intergenic |
ATGCTCAGCGAATTCGTAAC+CGG | 0.481082 | 4.4:+21359598 | MS.gene053577:CDS |
TTCACGATGATGATTGGGAT+TGG | 0.481484 | 4.4:+21359695 | MS.gene053577:CDS |
AGCTGGATGGTCCTGACAAA+GGG | 0.483919 | 4.4:+21365510 | MS.gene053577:CDS |
ATCCAGAAAGTGGTGATGAT+AGG | 0.485466 | 4.4:+21364982 | MS.gene053577:CDS |
TGGTCTTCTTCAATCGGCTT+AGG | 0.485777 | 4.4:+21368290 | MS.gene053577:CDS |
TCAGGAATTATGCCTTTATG+TGG | 0.485937 | 4.4:-21367817 | None:intergenic |
GGATAATGAGAAGACGTTCC+TGG | 0.486464 | 4.4:-21359753 | None:intergenic |
TCGATGGGTTGACGGCGAAC+TGG | 0.487669 | 4.4:+21368082 | MS.gene053577:CDS |
TTTAAGGGATCAAATGAAGT+TGG | 0.487879 | 4.4:-21365856 | None:intergenic |
CTGTGTACCTAAAGCGAAAA+GGG | 0.489273 | 4.4:+21364847 | MS.gene053577:CDS |
CTATAAAGGTGAAGGAAGAT+TGG | 0.490683 | 4.4:+21368037 | MS.gene053577:CDS |
ATTTGAGGAAGAAGAGAGTG+AGG | 0.490887 | 4.4:+21365151 | MS.gene053577:CDS |
AGAAGAAAATCACCATTTAA+GGG | 0.491201 | 4.4:-21365871 | None:intergenic |
AATCCAGGTATTCCCTCAGC+AGG | 0.492533 | 4.4:-21365020 | None:intergenic |
GAAGGGAAGTGAAGAAGGGA+AGG | 0.493115 | 4.4:-21359484 | None:intergenic |
TTATGCCTTTATGTGGAAGT+TGG | 0.496915 | 4.4:-21367810 | None:intergenic |
GCTGTGTACCTAAAGCGAAA+AGG | 0.499106 | 4.4:+21364846 | MS.gene053577:CDS |
AATGGTTTAGAGGACGTTGT+TGG | 0.499517 | 4.4:-21364885 | None:intergenic |
TCTAAACCATTGGATGCTAG+TGG | 0.500108 | 4.4:+21364897 | MS.gene053577:CDS |
GTTGTGGTTGTCGTCGGAGA+CGG | 0.502569 | 4.4:-21359533 | None:intergenic |
GGATCTGGAAGACATTAAGT+TGG | 0.507763 | 4.4:+21365268 | MS.gene053577:CDS |
CTGGCGTCAGCATTTCGATC+AGG | 0.508636 | 4.4:+21359723 | MS.gene053577:CDS |
CAATACACAAATCCAACAAC+AGG | 0.509155 | 4.4:-21368247 | None:intergenic |
GGCTTATATATTGGTGCATA+CGG | 0.510863 | 4.4:+21366012 | MS.gene053577:intron |
GGAACTCGAAGCAAATCTCT+AGG | 0.511114 | 4.4:-21365425 | None:intergenic |
ATCGAATTGTTTAATTGCGC+CGG | 0.512264 | 4.4:-21359617 | None:intergenic |
TTGAGAAGGGAAGTGAAGAA+GGG | 0.515623 | 4.4:-21359488 | None:intergenic |
TGTACTGTTGTGGTTGTCGT+CGG | 0.518748 | 4.4:-21359539 | None:intergenic |
TTTCGTGCAAAAGTTGGAAA+GGG | 0.520545 | 4.4:+21367784 | MS.gene053577:CDS |
TCGGCTTAGGCTTCAACAGT+AGG | 0.520867 | 4.4:+21368303 | MS.gene053577:CDS |
TGCGATCGCCACCTTAAGCT+TGG | 0.521130 | 4.4:-21360386 | None:intergenic |
CGCCATCGTTTGTACTGTTG+TGG | 0.522210 | 4.4:-21359549 | None:intergenic |
ATCGGCTCTTGCAGGTGGGT+TGG | 0.524231 | 4.4:+21361212 | MS.gene053577:intron |
AGAAGGGAAGGGCGTTTGAG+AGG | 0.524467 | 4.4:-21359472 | None:intergenic |
TGATGTTCACGATGATGATT+GGG | 0.524545 | 4.4:+21359690 | MS.gene053577:CDS |
ACTGGTGATTCTTGATGGAA+AGG | 0.526262 | 4.4:+21368100 | MS.gene053577:CDS |
AACAACGTCCTCTAAACCAT+TGG | 0.527043 | 4.4:+21364887 | MS.gene053577:CDS |
ATTGCTGTCAAAGTTGTCAT+TGG | 0.527238 | 4.4:+21365368 | MS.gene053577:CDS |
TGGCAAGGAGTTATAGTCCT+AGG | 0.530789 | 4.4:+21361311 | MS.gene053577:CDS |
AAAAGGTGACTTTAAGTCGC+AGG | 0.534499 | 4.4:+21362719 | MS.gene053577:CDS |
AGAGGACGGTAGGGCGAAGG+AGG | 0.535554 | 4.4:+21366086 | MS.gene053577:CDS |
CAACTTGCAACATCTGCTGC+TGG | 0.537244 | 4.4:+21362660 | MS.gene053577:CDS |
AAAATCTTCACCTTCACACC+AGG | 0.537647 | 4.4:-21365068 | None:intergenic |
GCAAGAGGACGGTAGGGCGA+AGG | 0.538768 | 4.4:+21366083 | MS.gene053577:CDS |
CAGAGACATAACGGTTGAGA+AGG | 0.539217 | 4.4:-21359502 | None:intergenic |
GCAGCTAACAATGACAGTGT+TGG | 0.540513 | 4.4:+21360412 | MS.gene053577:CDS |
GATAAGTCTCACTCTAAGCC+AGG | 0.543885 | 4.4:+21365780 | MS.gene053577:CDS |
GGAAGGGCGTTTGAGAGGGA+AGG | 0.544555 | 4.4:-21359467 | None:intergenic |
TGGTTTAGAGGACGTTGTTG+GGG | 0.544662 | 4.4:-21364883 | None:intergenic |
ATTACGTCATGCTGTATATG+TGG | 0.546678 | 4.4:+21360345 | MS.gene053577:CDS |
TGAAAACGAAGTCAATCAGC+TGG | 0.546784 | 4.4:+21365493 | MS.gene053577:CDS |
GAACTCGAAGCAAATCTCTA+GGG | 0.553123 | 4.4:-21365424 | None:intergenic |
TTTCGATCAGGTTGATGACC+AGG | 0.559219 | 4.4:+21359735 | MS.gene053577:CDS |
GCTGTCAAAGTTGTCATTGG+TGG | 0.560173 | 4.4:+21365371 | MS.gene053577:CDS |
ATTTCGTGCAAAAGTTGGAA+AGG | 0.563212 | 4.4:+21367783 | MS.gene053577:CDS |
AGAATCATCAACCATTATCT+GGG | 0.563332 | 4.4:+21365806 | MS.gene053577:CDS |
TGAGAGGGAAGGTTGTGGAG+AGG | 0.564631 | 4.4:-21359456 | None:intergenic |
GTCAATGGCAAGAGGACGGT+AGG | 0.565511 | 4.4:+21366076 | MS.gene053577:CDS |
ATGATTGGGATTGGAATCGC+TGG | 0.567951 | 4.4:+21359704 | MS.gene053577:CDS |
TCTTGCAAAATTCATTGGCA+AGG | 0.568463 | 4.4:+21365598 | MS.gene053577:CDS |
TAAGTTGGAAACTGATCAAG+AGG | 0.571150 | 4.4:+21365283 | MS.gene053577:CDS |
CTGATCAAGAGGGAGATGAT+GGG | 0.571236 | 4.4:+21365294 | MS.gene053577:CDS |
ACGTCTTCTCATTATCCTCA+AGG | 0.573451 | 4.4:+21359759 | MS.gene053577:CDS |
CGCTGAGCATCGAATCCCAC+CGG | 0.573541 | 4.4:-21359585 | None:intergenic |
TGAGACGTAGATATGGTCAA+TGG | 0.575070 | 4.4:+21366061 | MS.gene053577:CDS |
CAGCTGGATGGTCCTGACAA+AGG | 0.575602 | 4.4:+21365509 | MS.gene053577:CDS |
TATATGAACTTGCTTAGGAG+AGG | 0.581864 | 4.4:+21359643 | MS.gene053577:CDS |
GCGACGGTAACAACCGCCGG+TGG | 0.583150 | 4.4:+21359569 | MS.gene053577:CDS |
AAGGGAAGTGAAGAAGGGAA+GGG | 0.583385 | 4.4:-21359483 | None:intergenic |
GGGGATCCTTATGTACCAGC+TGG | 0.584664 | 4.4:+21366156 | MS.gene053577:CDS |
AGTGGTGATGATAGGAATGA+TGG | 0.585157 | 4.4:+21364990 | MS.gene053577:CDS |
AGCTGGTACATAAGGATCCC+CGG | 0.585540 | 4.4:-21366154 | None:intergenic |
ATGGCGACGGTAACAACCGC+CGG | 0.587272 | 4.4:+21359566 | MS.gene053577:CDS |
AACGAAGTCAATCAGCTGGA+TGG | 0.589327 | 4.4:+21365497 | MS.gene053577:CDS |
TGATGGCTCTGACCCTGCTG+AGG | 0.594277 | 4.4:+21365007 | MS.gene053577:CDS |
TAGTGGGAGATCAAGTTCAA+TGG | 0.595293 | 4.4:+21364914 | MS.gene053577:CDS |
TAGAAGCCTTGAAAATAACC+GGG | 0.595455 | 4.4:+21366136 | MS.gene053577:CDS |
AGGGTTTCAGAATCCTCGAT+GGG | 0.596282 | 4.4:+21368067 | MS.gene053577:CDS |
CAAGGATAAAGTACCTGCAA+AGG | 0.597432 | 4.4:+21365616 | MS.gene053577:CDS |
AAGGAAGATTGGCAGAGCCA+GGG | 0.598137 | 4.4:+21368048 | MS.gene053577:CDS |
TTATAGGTGCTGAAAGAGGT+AGG | 0.599822 | 4.4:+21365751 | MS.gene053577:intron |
GATCTCCCACTAGCATCCAA+TGG | 0.600894 | 4.4:-21364903 | None:intergenic |
TGGGAAAGTGAGGTGTGGAG+TGG | 0.600919 | 4.4:-21359425 | None:intergenic |
AGAGACATAACGGTTGAGAA+GGG | 0.601243 | 4.4:-21359501 | None:intergenic |
CTAAACCATTGGATGCTAGT+GGG | 0.606784 | 4.4:+21364898 | MS.gene053577:CDS |
ATTGCTCGCTATAAAGGTGA+AGG | 0.614217 | 4.4:+21368029 | MS.gene053577:CDS |
ATTCGCATAACTCCAGAGCA+TGG | 0.619023 | 4.4:+21361280 | MS.gene053577:CDS |
GAGTTGAGACAGAGACATAA+CGG | 0.619755 | 4.4:-21359511 | None:intergenic |
CAGGGTTTCAGAATCCTCGA+TGG | 0.621991 | 4.4:+21368066 | MS.gene053577:CDS |
TGACAGTGAAGATGAAGACA+AGG | 0.622731 | 4.4:+21365226 | MS.gene053577:CDS |
AATCTTATAGGTGCTGAAAG+AGG | 0.625560 | 4.4:+21365747 | MS.gene053577:intron |
CGACGGTAACAACCGCCGGT+GGG | 0.626255 | 4.4:+21359570 | MS.gene053577:CDS |
TTCGTGCAAAAGTTGGAAAG+GGG | 0.629131 | 4.4:+21367785 | MS.gene053577:CDS |
CGTGCTGCTGATAAAGAAGA+CGG | 0.635990 | 4.4:+21359667 | MS.gene053577:CDS |
AACTCCAGAGAAAGTAGACA+AGG | 0.636781 | 4.4:+21365100 | MS.gene053577:CDS |
GATGAAAATGGAGAAGATGA+CGG | 0.637566 | 4.4:+21365179 | MS.gene053577:CDS |
GATGACGGCGACGAAGACGA+CGG | 0.640000 | 4.4:+21365194 | MS.gene053577:CDS |
TCAATGGCAAGAGGACGGTA+GGG | 0.641899 | 4.4:+21366077 | MS.gene053577:CDS |
TATGGTCAATGGCAAGAGGA+CGG | 0.642128 | 4.4:+21366072 | MS.gene053577:CDS |
AGTACTGAAGATCCAGAAAG+TGG | 0.643156 | 4.4:+21364972 | MS.gene053577:CDS |
AACTCGAAGCAAATCTCTAG+GGG | 0.644855 | 4.4:-21365423 | None:intergenic |
TAGATATGGTCAATGGCAAG+AGG | 0.645192 | 4.4:+21366068 | MS.gene053577:CDS |
GATGGCTCTGACCCTGCTGA+GGG | 0.645476 | 4.4:+21365008 | MS.gene053577:CDS |
AGATATGATTCCTGGTGTGA+AGG | 0.648291 | 4.4:+21365058 | MS.gene053577:CDS |
ACGTCATGCTGTATATGTGG+AGG | 0.648411 | 4.4:+21360348 | MS.gene053577:CDS |
AGCATGGAAGATACGTGGCA+AGG | 0.655041 | 4.4:+21361296 | MS.gene053577:CDS |
AATTCCTGAAGAATTTGGAG+TGG | 0.655235 | 4.4:+21367831 | MS.gene053577:CDS |
ATGCGAATAATTAGACCATG+TGG | 0.655540 | 4.4:-21361265 | None:intergenic |
AGAAGCTGCCAAGCTTAAGG+TGG | 0.664484 | 4.4:+21360378 | MS.gene053577:CDS |
GGTTTAGAGGACGTTGTTGG+GGG | 0.666760 | 4.4:-21364882 | None:intergenic |
ATCCAGGTATTCCCTCAGCA+GGG | 0.668053 | 4.4:-21365019 | None:intergenic |
AACAGTACAAACGATGGCGA+CGG | 0.670972 | 4.4:+21359553 | MS.gene053577:CDS |
AAGCGAAAAGGGTCCTACCA+CGG | 0.671399 | 4.4:+21364858 | MS.gene053577:CDS |
CGTCTTCTTTATCAGCAGCA+CGG | 0.673191 | 4.4:-21359666 | None:intergenic |
TGAGCATCGAATCCCACCGG+CGG | 0.680677 | 4.4:-21359582 | None:intergenic |
AAAGATGTGAACGATCCACA+TGG | 0.683209 | 4.4:+21361250 | MS.gene053577:CDS |
TCCAGAGCATGGAAGATACG+TGG | 0.699631 | 4.4:+21361291 | MS.gene053577:CDS |
AACCACAACAGTACAAACGA+TGG | 0.710045 | 4.4:+21359547 | MS.gene053577:CDS |
AGAGAGCCATAAAAGAAGAG+CGG | 0.715120 | 4.4:+21360595 | MS.gene053577:intron |
AGTTCGCCGTCAACCCATCG+AGG | 0.722680 | 4.4:-21368080 | None:intergenic |
AAGTTGGAAACTGATCAAGA+GGG | 0.742549 | 4.4:+21365284 | MS.gene053577:CDS |
AGAAGCCTTGAAAATAACCG+GGG | 0.742842 | 4.4:+21366137 | MS.gene053577:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 21359400 | 21368324 | 21359400 | ID=MS.gene053577 |
chr4.4 | mRNA | 21359400 | 21368324 | 21359400 | ID=MS.gene053577.t1;Parent=MS.gene053577 |
chr4.4 | exon | 21359400 | 21359780 | 21359400 | ID=MS.gene053577.t1.exon1;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21359400 | 21359780 | 21359400 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21360340 | 21360456 | 21360340 | ID=MS.gene053577.t1.exon2;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21360340 | 21360456 | 21360340 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21360597 | 21360662 | 21360597 | ID=MS.gene053577.t1.exon3;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21360597 | 21360662 | 21360597 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21361226 | 21361332 | 21361226 | ID=MS.gene053577.t1.exon4;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21361226 | 21361332 | 21361226 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21362659 | 21362740 | 21362659 | ID=MS.gene053577.t1.exon5;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21362659 | 21362740 | 21362659 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21364846 | 21365637 | 21364846 | ID=MS.gene053577.t1.exon6;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21364846 | 21365637 | 21364846 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21365757 | 21365880 | 21365757 | ID=MS.gene053577.t1.exon7;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21365757 | 21365880 | 21365757 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21366013 | 21366182 | 21366013 | ID=MS.gene053577.t1.exon8;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21366013 | 21366182 | 21366013 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21367778 | 21367852 | 21367778 | ID=MS.gene053577.t1.exon9;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21367778 | 21367852 | 21367778 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21368029 | 21368121 | 21368029 | ID=MS.gene053577.t1.exon10;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21368029 | 21368121 | 21368029 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
chr4.4 | exon | 21368232 | 21368324 | 21368232 | ID=MS.gene053577.t1.exon11;Parent=MS.gene053577.t1 |
chr4.4 | CDS | 21368232 | 21368324 | 21368232 | ID=cds.MS.gene053577.t1;Parent=MS.gene053577.t1 |
Gene Sequence |
Protein sequence |