Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45595.t1 | XP_013459414.1 | 83.6 | 518 | 77 | 3 | 15 | 529 | 49 | 561 | 5.10E-209 | 737.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45595.t1 | Q9LKL2 | 46.9 | 561 | 236 | 14 | 15 | 525 | 44 | 592 | 2.9e-91 | 337.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45595.t1 | A0A072V5J5 | 83.6 | 518 | 77 | 3 | 15 | 529 | 49 | 561 | 3.7e-209 | 737.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050702 | MS.gene45595 | -0.861983 | 6.99E-64 | -1.69E-46 |
MS.gene052224 | MS.gene45595 | -0.853449 | 2.37E-61 | -1.69E-46 |
MS.gene053401 | MS.gene45595 | 0.855939 | 4.50E-62 | -1.69E-46 |
MS.gene056338 | MS.gene45595 | 0.808867 | 2.51E-50 | -1.69E-46 |
MS.gene058551 | MS.gene45595 | 0.826555 | 2.54E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45595.t1 | MTR_3g037390 | 90.057 | 523 | 44 | 3 | 10 | 529 | 44 | 561 | 0.0 | 971 |
MS.gene45595.t1 | MTR_3g037390 | 90.043 | 462 | 38 | 3 | 71 | 529 | 1 | 457 | 0.0 | 862 |
MS.gene45595.t1 | MTR_4g108880 | 64.432 | 537 | 135 | 8 | 15 | 525 | 58 | 564 | 0.0 | 668 |
MS.gene45595.t1 | MTR_3g037400 | 66.304 | 92 | 27 | 3 | 20 | 108 | 158 | 248 | 3.23e-26 | 110 |
MS.gene45595.t1 | MTR_3g092780 | 29.740 | 269 | 156 | 7 | 15 | 282 | 81 | 317 | 4.77e-24 | 106 |
MS.gene45595.t1 | MTR_3g092780 | 68.889 | 45 | 14 | 0 | 466 | 510 | 589 | 633 | 1.14e-12 | 70.9 |
MS.gene45595.t1 | MTR_3g092780 | 29.740 | 269 | 156 | 7 | 15 | 282 | 81 | 317 | 5.54e-24 | 106 |
MS.gene45595.t1 | MTR_3g092780 | 68.889 | 45 | 14 | 0 | 466 | 510 | 630 | 674 | 1.11e-12 | 71.2 |
MS.gene45595.t1 | MTR_3g092780 | 50.000 | 98 | 49 | 0 | 15 | 112 | 81 | 178 | 1.53e-23 | 105 |
MS.gene45595.t1 | MTR_3g092780 | 68.889 | 45 | 14 | 0 | 466 | 510 | 631 | 675 | 1.11e-12 | 71.2 |
MS.gene45595.t1 | MTR_3g092780 | 50.000 | 98 | 49 | 0 | 15 | 112 | 81 | 178 | 1.55e-23 | 105 |
MS.gene45595.t1 | MTR_3g092780 | 68.889 | 45 | 14 | 0 | 466 | 510 | 590 | 634 | 1.15e-12 | 70.9 |
MS.gene45595.t1 | MTR_4g061360 | 34.270 | 178 | 107 | 3 | 15 | 186 | 114 | 287 | 1.27e-21 | 99.4 |
MS.gene45595.t1 | MTR_4g061360 | 68.750 | 48 | 15 | 0 | 462 | 509 | 717 | 764 | 3.31e-15 | 79.3 |
MS.gene45595.t1 | MTR_8g024260 | 36.620 | 142 | 73 | 1 | 15 | 156 | 61 | 185 | 1.77e-21 | 98.6 |
MS.gene45595.t1 | MTR_8g024260 | 66.667 | 45 | 15 | 0 | 465 | 509 | 583 | 627 | 1.01e-11 | 67.8 |
MS.gene45595.t1 | MTR_7g118260 | 45.361 | 97 | 53 | 0 | 15 | 111 | 39 | 135 | 5.38e-21 | 97.1 |
MS.gene45595.t1 | MTR_7g118260 | 60.000 | 50 | 20 | 0 | 462 | 511 | 537 | 586 | 2.89e-13 | 72.8 |
MS.gene45595.t1 | MTR_7g118260 | 45.361 | 97 | 53 | 0 | 15 | 111 | 39 | 135 | 6.37e-21 | 96.7 |
MS.gene45595.t1 | MTR_7g118260 | 60.000 | 50 | 20 | 0 | 462 | 511 | 500 | 549 | 3.36e-13 | 72.4 |
MS.gene45595.t1 | MTR_1g067110 | 31.443 | 194 | 115 | 3 | 15 | 195 | 110 | 298 | 9.47e-21 | 96.7 |
MS.gene45595.t1 | MTR_1g067110 | 31.443 | 194 | 115 | 3 | 15 | 195 | 110 | 298 | 1.25e-20 | 96.3 |
MS.gene45595.t1 | MTR_1g067110 | 61.404 | 57 | 19 | 1 | 453 | 506 | 678 | 734 | 1.03e-12 | 71.2 |
MS.gene45595.t1 | MTR_2g034960 | 38.614 | 101 | 59 | 1 | 13 | 113 | 56 | 153 | 1.52e-15 | 80.1 |
MS.gene45595.t1 | MTR_1g032570 | 27.723 | 202 | 122 | 5 | 1 | 194 | 18 | 203 | 1.86e-15 | 79.7 |
MS.gene45595.t1 | MTR_3g086100 | 33.333 | 120 | 69 | 2 | 1 | 112 | 20 | 136 | 1.87e-15 | 79.7 |
MS.gene45595.t1 | MTR_2g450070 | 36.066 | 122 | 66 | 4 | 1 | 113 | 24 | 142 | 2.09e-15 | 79.7 |
MS.gene45595.t1 | MTR_2g450070 | 36.066 | 122 | 66 | 4 | 1 | 113 | 24 | 142 | 2.26e-15 | 79.7 |
MS.gene45595.t1 | MTR_4g121020 | 36.634 | 101 | 61 | 1 | 13 | 113 | 58 | 155 | 1.08e-14 | 77.4 |
MS.gene45595.t1 | MTR_4g121020 | 36.634 | 101 | 61 | 1 | 13 | 113 | 58 | 155 | 1.08e-14 | 77.4 |
MS.gene45595.t1 | MTR_3g102600 | 38.144 | 97 | 54 | 2 | 19 | 112 | 38 | 131 | 1.44e-14 | 73.6 |
MS.gene45595.t1 | MTR_3g102600 | 38.144 | 97 | 54 | 2 | 19 | 112 | 38 | 131 | 1.84e-14 | 72.4 |
MS.gene45595.t1 | MTR_8g079940 | 35.294 | 102 | 63 | 1 | 11 | 112 | 50 | 148 | 3.26e-14 | 75.5 |
MS.gene45595.t1 | MTR_1g013170 | 34.426 | 122 | 68 | 4 | 1 | 113 | 11 | 129 | 3.36e-14 | 75.5 |
MS.gene45595.t1 | MTR_4g131580 | 32.759 | 116 | 67 | 2 | 5 | 112 | 28 | 140 | 3.59e-14 | 75.5 |
MS.gene45595.t1 | MTR_3g102600 | 38.095 | 84 | 49 | 1 | 29 | 112 | 2 | 82 | 3.85e-14 | 70.1 |
MS.gene45595.t1 | MTR_3g106220 | 33.673 | 98 | 62 | 1 | 16 | 113 | 38 | 132 | 6.34e-14 | 75.1 |
MS.gene45595.t1 | MTR_7g118260 | 60.000 | 50 | 20 | 0 | 462 | 511 | 367 | 416 | 1.43e-13 | 73.2 |
MS.gene45595.t1 | MTR_3g102600 | 39.241 | 79 | 45 | 1 | 34 | 112 | 7 | 82 | 1.49e-13 | 69.3 |
MS.gene45595.t1 | MTR_7g118260 | 60.000 | 50 | 20 | 0 | 462 | 511 | 451 | 500 | 1.70e-13 | 73.2 |
MS.gene45595.t1 | MTR_4g131600 | 32.231 | 121 | 70 | 3 | 1 | 112 | 26 | 143 | 3.05e-13 | 72.8 |
MS.gene45595.t1 | MTR_4g131570 | 32.231 | 121 | 70 | 3 | 1 | 112 | 23 | 140 | 3.51e-13 | 72.4 |
MS.gene45595.t1 | MTR_7g117705 | 30.769 | 156 | 91 | 5 | 1 | 142 | 11 | 163 | 7.48e-13 | 71.2 |
MS.gene45595.t1 | MTR_1g067110 | 61.404 | 57 | 19 | 1 | 453 | 506 | 513 | 569 | 7.76e-13 | 71.2 |
MS.gene45595.t1 | MTR_1g067110 | 31.159 | 138 | 77 | 3 | 71 | 195 | 1 | 133 | 2.31e-11 | 66.6 |
MS.gene45595.t1 | MTR_3g037450 | 74.419 | 43 | 7 | 1 | 71 | 113 | 1 | 39 | 1.32e-12 | 63.2 |
MS.gene45595.t1 | MTR_4g093730 | 55.357 | 56 | 25 | 0 | 452 | 507 | 94 | 149 | 1.58e-12 | 69.3 |
MS.gene45595.t1 | MTR_1g032570 | 30.667 | 150 | 88 | 4 | 45 | 194 | 1 | 134 | 3.63e-12 | 69.3 |
MS.gene45595.t1 | MTR_1g013180 | 32.653 | 98 | 63 | 1 | 16 | 113 | 186 | 280 | 4.05e-12 | 69.3 |
MS.gene45595.t1 | MTR_3g100040 | 57.143 | 49 | 21 | 0 | 458 | 506 | 19 | 67 | 1.11e-11 | 65.5 |
MS.gene45595.t1 | MTR_3g100040 | 57.143 | 49 | 21 | 0 | 458 | 506 | 123 | 171 | 1.54e-11 | 66.2 |
MS.gene45595.t1 | MTR_3g086100 | 42.647 | 68 | 36 | 1 | 45 | 112 | 1 | 65 | 2.65e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45595.t1 | AT5G61380 | 47.038 | 574 | 220 | 19 | 15 | 527 | 44 | 594 | 1.03e-141 | 422 |
MS.gene45595.t1 | AT5G24470 | 48.039 | 102 | 53 | 0 | 15 | 116 | 75 | 176 | 4.24e-23 | 103 |
MS.gene45595.t1 | AT5G24470 | 55.357 | 56 | 25 | 0 | 454 | 509 | 497 | 552 | 1.21e-12 | 70.9 |
MS.gene45595.t1 | AT2G46790 | 45.361 | 97 | 53 | 0 | 15 | 111 | 62 | 158 | 6.19e-23 | 102 |
MS.gene45595.t1 | AT2G46790 | 45.361 | 97 | 53 | 0 | 15 | 111 | 62 | 158 | 8.98e-23 | 101 |
MS.gene45595.t1 | AT2G46790 | 69.565 | 46 | 14 | 0 | 465 | 510 | 416 | 461 | 2.24e-14 | 75.9 |
MS.gene45595.t1 | AT5G60100 | 47.423 | 97 | 51 | 0 | 15 | 111 | 89 | 185 | 4.49e-22 | 99.0 |
MS.gene45595.t1 | AT5G60100 | 47.423 | 97 | 51 | 0 | 15 | 111 | 89 | 185 | 4.49e-22 | 99.0 |
MS.gene45595.t1 | AT5G60100 | 47.423 | 97 | 51 | 0 | 15 | 111 | 89 | 185 | 4.49e-22 | 99.0 |
MS.gene45595.t1 | AT5G60100 | 47.423 | 97 | 51 | 0 | 15 | 111 | 89 | 185 | 9.11e-22 | 99.0 |
MS.gene45595.t1 | AT5G60100 | 68.182 | 44 | 14 | 0 | 465 | 508 | 441 | 484 | 6.67e-13 | 71.2 |
MS.gene45595.t1 | AT5G60100 | 47.423 | 97 | 51 | 0 | 15 | 111 | 89 | 185 | 9.11e-22 | 99.0 |
MS.gene45595.t1 | AT5G60100 | 68.182 | 44 | 14 | 0 | 465 | 508 | 441 | 484 | 6.67e-13 | 71.2 |
MS.gene45595.t1 | AT5G60100 | 47.423 | 97 | 51 | 0 | 15 | 111 | 89 | 185 | 9.11e-22 | 99.0 |
MS.gene45595.t1 | AT5G60100 | 68.182 | 44 | 14 | 0 | 465 | 508 | 441 | 484 | 6.67e-13 | 71.2 |
MS.gene45595.t1 | AT5G60100 | 47.423 | 97 | 51 | 0 | 15 | 111 | 89 | 185 | 1.80e-21 | 98.2 |
MS.gene45595.t1 | AT5G60100 | 68.182 | 44 | 14 | 0 | 465 | 508 | 468 | 511 | 8.77e-13 | 71.2 |
MS.gene45595.t1 | AT5G02810 | 47.778 | 90 | 44 | 1 | 22 | 111 | 113 | 199 | 8.99e-19 | 90.5 |
MS.gene45595.t1 | AT5G02810 | 70.588 | 51 | 15 | 0 | 458 | 508 | 661 | 711 | 1.14e-15 | 80.5 |
MS.gene45595.t1 | AT5G02810 | 63.793 | 58 | 21 | 0 | 458 | 515 | 517 | 574 | 7.70e-16 | 80.9 |
MS.gene45595.t1 | AT2G46670 | 71.111 | 45 | 13 | 0 | 466 | 510 | 132 | 176 | 1.42e-15 | 75.5 |
MS.gene45595.t1 | AT3G16857 | 37.624 | 101 | 60 | 1 | 13 | 113 | 60 | 157 | 1.64e-15 | 80.1 |
MS.gene45595.t1 | AT3G16857 | 37.624 | 101 | 60 | 1 | 13 | 113 | 60 | 157 | 1.73e-15 | 80.1 |
MS.gene45595.t1 | AT3G16857 | 39.773 | 88 | 50 | 1 | 26 | 113 | 3 | 87 | 3.69e-15 | 79.0 |
MS.gene45595.t1 | AT2G46790 | 69.565 | 46 | 14 | 0 | 465 | 510 | 259 | 304 | 6.82e-15 | 76.3 |
MS.gene45595.t1 | AT2G46790 | 69.565 | 46 | 14 | 0 | 465 | 510 | 259 | 304 | 6.82e-15 | 76.3 |
MS.gene45595.t1 | AT2G46790 | 69.565 | 46 | 14 | 0 | 465 | 510 | 299 | 344 | 1.53e-14 | 75.5 |
MS.gene45595.t1 | AT2G46790 | 63.415 | 41 | 15 | 0 | 71 | 111 | 1 | 41 | 1.20e-12 | 69.7 |
MS.gene45595.t1 | AT2G25180 | 35.052 | 97 | 60 | 1 | 16 | 112 | 43 | 136 | 4.69e-14 | 75.5 |
MS.gene45595.t1 | AT4G31920 | 34.737 | 95 | 59 | 1 | 16 | 110 | 43 | 134 | 1.86e-13 | 73.2 |
MS.gene45595.t1 | AT1G67710 | 31.667 | 120 | 71 | 2 | 1 | 112 | 14 | 130 | 4.04e-13 | 72.0 |
MS.gene45595.t1 | AT2G01760 | 31.068 | 103 | 69 | 1 | 10 | 112 | 31 | 131 | 2.71e-11 | 65.9 |
Find 115 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACATATTCATTGGGTAATA+GGG | 0.232593 | 3.1:+27033216 | None:intergenic |
GCACATATTCATTGGGTAAT+AGG | 0.254453 | 3.1:+27033215 | None:intergenic |
ATCCTTAGTTCGCTCTTCTT+TGG | 0.263156 | 3.1:+27033879 | None:intergenic |
GAACAATAGGTCCCATTTCT+TGG | 0.266361 | 3.1:+27033525 | None:intergenic |
CGCTCACCTCTTGCTCTTGT+TGG | 0.270627 | 3.1:+27035587 | None:intergenic |
GGACAATGAACCCCATTTCT+TGG | 0.284413 | 3.1:+27033444 | None:intergenic |
TTGTACTCCACCTGCATCTT+TGG | 0.287125 | 3.1:-27033607 | MS.gene45595:CDS |
ACTCCCGATGACAAATAATA+TGG | 0.320119 | 3.1:+27033381 | None:intergenic |
GGTTGTAAGCACATATTCAT+TGG | 0.352891 | 3.1:+27033207 | None:intergenic |
AGTCTTATACATCCAAGAAA+TGG | 0.355720 | 3.1:-27033537 | MS.gene45595:CDS |
CAACCAGGTCAGATTCCTTC+AGG | 0.363330 | 3.1:-27033189 | MS.gene45595:CDS |
AACTAAATCTTACTTATAAT+AGG | 0.364003 | 3.1:+27037506 | None:intergenic |
CAAAATTAAGTAAAGTTGAT+AGG | 0.368608 | 3.1:-27033131 | MS.gene45595:CDS |
CATCAGTGTCATCGGAGAAC+AGG | 0.370393 | 3.1:+27035653 | None:intergenic |
GCGAACTAAGGATTGGGGTT+GGG | 0.374057 | 3.1:-27033869 | MS.gene45595:CDS |
CGAACTAAGGATTGGGGTTG+GGG | 0.375308 | 3.1:-27033868 | MS.gene45595:CDS |
TTCTGCGCAATTCTTTGTCT+CGG | 0.375322 | 3.1:+27037531 | None:intergenic |
CATTCTGATGCATGATCATC+TGG | 0.375477 | 3.1:+27034770 | None:intergenic |
TGTCTGATGCATCCAAGAAA+TGG | 0.381220 | 3.1:-27033456 | MS.gene45595:CDS |
CAGCATGAACAATCCCTTCA+AGG | 0.386500 | 3.1:+27033796 | None:intergenic |
GTCTGATGCATCCAAGAAAT+GGG | 0.388638 | 3.1:-27033455 | MS.gene45595:CDS |
CTAATGAACTCTTAAATTTG+TGG | 0.392317 | 3.1:-27037305 | MS.gene45595:CDS |
GGTGTTAATGTGGATCTTAA+TGG | 0.393979 | 3.1:-27032973 | MS.gene45595:CDS |
ATCTTCATGCCCTTCTTCTT+CGG | 0.403681 | 3.1:+27037569 | None:intergenic |
TATCCATATTATTTGTCATC+GGG | 0.404835 | 3.1:-27033384 | MS.gene45595:CDS |
CATATCGAGCTCAGAACAAT+AGG | 0.405798 | 3.1:+27033512 | None:intergenic |
AGAAGAGCGAACTAAGGATT+GGG | 0.437707 | 3.1:-27033875 | MS.gene45595:CDS |
ACCAGGTATACTATTGCTGC+TGG | 0.455033 | 3.1:+27033650 | None:intergenic |
GTTGTAAGCACATATTCATT+GGG | 0.463517 | 3.1:+27033208 | None:intergenic |
TCTGCGCAATTCTTTGTCTC+GGG | 0.465345 | 3.1:+27037532 | None:intergenic |
AACTTCCATCCTCACATGTA+AGG | 0.465807 | 3.1:+27033764 | None:intergenic |
TCATTTACTCCATGGACATC+AGG | 0.468519 | 3.1:+27034743 | None:intergenic |
GATTGTGGCCGCGCCGTCAC+AGG | 0.470924 | 3.1:+27038325 | None:intergenic |
AGAAGCACTATTCAAGAGAC+AGG | 0.475811 | 3.1:-27035619 | MS.gene45595:CDS |
TGATACATTTGCGCCGATGA+AGG | 0.476546 | 3.1:+27033342 | None:intergenic |
CCCAGCAGCAATAGTATACC+TGG | 0.477013 | 3.1:-27033651 | MS.gene45595:CDS |
CTCCAAAGAAGAGCGAACTA+AGG | 0.481928 | 3.1:-27033881 | MS.gene45595:CDS |
ATTGAATATGATGAAAATGA+AGG | 0.483324 | 3.1:-27032937 | MS.gene45595:CDS |
GTCTTATACATCCAAGAAAT+GGG | 0.483992 | 3.1:-27033536 | MS.gene45595:CDS |
GTTAAATTATGACTTTGATC+TGG | 0.486159 | 3.1:-27035716 | MS.gene45595:CDS |
AAGAAGAGCGAACTAAGGAT+TGG | 0.487567 | 3.1:-27033876 | MS.gene45595:CDS |
GGAGTAAATGATCAGCGAAC+AGG | 0.494921 | 3.1:-27034731 | MS.gene45595:intron |
ATGTTAGATCTTTCACGCTC+AGG | 0.497470 | 3.1:+27033423 | None:intergenic |
TCATGCCCTTCTTCTTCGGA+AGG | 0.501684 | 3.1:+27037573 | None:intergenic |
AAGAGTTCATTAGTGCGTAA+AGG | 0.501760 | 3.1:+27037315 | None:intergenic |
CTCTCAATAGATAAAGAACC+AGG | 0.507067 | 3.1:+27033633 | None:intergenic |
CTGTTTGTATTGTTATCGCT+AGG | 0.509038 | 3.1:+27035682 | None:intergenic |
TGACGGCGCGGCCACAATCA+AGG | 0.509859 | 3.1:-27038321 | MS.gene45595:CDS |
GGTCAGTCATGGCCATCCTT+CGG | 0.511134 | 3.1:-27033168 | MS.gene45595:CDS |
TGTGAGGCTTCCAAAGATGC+AGG | 0.515634 | 3.1:+27033597 | None:intergenic |
TCATGTTATGATGCCTTCAT+CGG | 0.517737 | 3.1:-27033355 | MS.gene45595:CDS |
AGTTGGCCTTCCGAAGAAGA+AGG | 0.517951 | 3.1:-27037579 | MS.gene45595:CDS |
AGAAAATTAGGTATGTCAAT+CGG | 0.521151 | 3.1:-27033053 | MS.gene45595:CDS |
CAGCATGATTCTGCAGGTCG+TGG | 0.521808 | 3.1:+27033310 | None:intergenic |
TTCGCTGATCATTTACTCCA+TGG | 0.523141 | 3.1:+27034735 | None:intergenic |
GGAAACTATAGATCTCATAC+TGG | 0.527599 | 3.1:-27037606 | MS.gene45595:CDS |
GTTGTTAAGTGCTTGAGACT+CGG | 0.531794 | 3.1:-27037360 | MS.gene45595:CDS |
GACATCATTCCGGTGGTATG+AGG | 0.533530 | 3.1:+27033243 | None:intergenic |
CATGAAGCATGTGCTCAACA+AGG | 0.536975 | 3.1:-27033738 | MS.gene45595:CDS |
TTATCCATATTATTTGTCAT+CGG | 0.538736 | 3.1:-27033385 | MS.gene45595:CDS |
TGCTAATGCTGATGCTGTTG+AGG | 0.539629 | 3.1:-27034798 | MS.gene45595:CDS |
AGCGAACTAAGGATTGGGGT+TGG | 0.541428 | 3.1:-27033870 | MS.gene45595:CDS |
GATCTCATACTGGCTGAAGT+TGG | 0.542729 | 3.1:-27037596 | MS.gene45595:CDS |
ATAGGGGTAGGACATCATTC+CGG | 0.544576 | 3.1:+27033233 | None:intergenic |
CCAGGTATACTATTGCTGCT+GGG | 0.549234 | 3.1:+27033651 | None:intergenic |
CGAGTTATCATCAGTGTCAT+CGG | 0.550154 | 3.1:+27035645 | None:intergenic |
ATGAATATGTGCTTACAACC+AGG | 0.553880 | 3.1:-27033204 | MS.gene45595:CDS |
GAATGTCAGCCTGATGTCCA+TGG | 0.557310 | 3.1:-27034752 | MS.gene45595:CDS |
TGTGGACGCACATGTGGAGA+AGG | 0.558944 | 3.1:-27037287 | MS.gene45595:CDS |
TTGAATATGATGAAAATGAA+GGG | 0.559631 | 3.1:-27032936 | MS.gene45595:CDS |
ATGTACCAGCATGATTCTGC+AGG | 0.560138 | 3.1:+27033304 | None:intergenic |
CACGACCTGCAGAATCATGC+TGG | 0.560739 | 3.1:-27033309 | MS.gene45595:CDS |
TGATGCACTGAATGCAGAGA+AGG | 0.561148 | 3.1:-27037627 | MS.gene45595:CDS |
ATCAGTCCAACAAGAGCAAG+AGG | 0.563155 | 3.1:-27035593 | MS.gene45595:intron |
TCGGATGAACTTCCGAAGGA+TGG | 0.565075 | 3.1:+27033156 | None:intergenic |
ATCAGTGTCATCGGAGAACA+GGG | 0.565153 | 3.1:+27035654 | None:intergenic |
TAAATTTGTGGACGCACATG+TGG | 0.565713 | 3.1:-27037293 | MS.gene45595:CDS |
TGAAAGACGGCCTCGTGTGA+GGG | 0.569464 | 3.1:-27033019 | MS.gene45595:CDS |
ATTTGTATGTTGGCCTGTGA+CGG | 0.570721 | 3.1:-27038338 | None:intergenic |
TGCTTCGGATGAACTTCCGA+AGG | 0.577350 | 3.1:+27033152 | None:intergenic |
ATTCATTGGGTAATAGGGGT+AGG | 0.578636 | 3.1:+27033221 | None:intergenic |
AGATTCCTTCAGGTCAGTCA+TGG | 0.579147 | 3.1:-27033179 | MS.gene45595:CDS |
CAGTTTGTCAGTAAGATGAA+TGG | 0.579522 | 3.1:-27032994 | MS.gene45595:CDS |
CAGGTATACTATTGCTGCTG+GGG | 0.581806 | 3.1:+27033652 | None:intergenic |
GGAAACAACTTGCTGAAAGA+CGG | 0.584344 | 3.1:-27033032 | MS.gene45595:CDS |
CTGAAAGACGGCCTCGTGTG+AGG | 0.586756 | 3.1:-27033020 | MS.gene45595:CDS |
GAAAGACGGCCTCGTGTGAG+GGG | 0.590286 | 3.1:-27033018 | MS.gene45595:CDS |
TGCCGCCTTACATGTGAGGA+TGG | 0.593042 | 3.1:-27033769 | MS.gene45595:CDS |
GATGGCCATGACTGACCTGA+AGG | 0.597115 | 3.1:+27033174 | None:intergenic |
GTTGGCCTTCCGAAGAAGAA+GGG | 0.599234 | 3.1:-27037578 | MS.gene45595:CDS |
ACATATTCATTGGGTAATAG+GGG | 0.603859 | 3.1:+27033217 | None:intergenic |
ATGAAGCATGTGCTCAACAA+GGG | 0.604325 | 3.1:-27033737 | MS.gene45595:CDS |
AGTGATGTCTGCACAAGATG+AGG | 0.604714 | 3.1:-27037391 | MS.gene45595:CDS |
TCATCATATTCAATGGAAGG+AGG | 0.605016 | 3.1:+27032946 | None:intergenic |
TAAGATGAATGGTGTTAATG+TGG | 0.608624 | 3.1:-27032983 | MS.gene45595:CDS |
CAAGGCGGTCCTCATACCAC+CGG | 0.623009 | 3.1:-27033252 | MS.gene45595:CDS |
CACTACAATCATGTTCCACA+AGG | 0.630620 | 3.1:-27033270 | MS.gene45595:CDS |
GGACGCACATGTGGAGAAGG+AGG | 0.632559 | 3.1:-27037284 | MS.gene45595:CDS |
GTGGTATGAGGACCGCCTTG+TGG | 0.638168 | 3.1:+27033255 | None:intergenic |
TGACCTGAAGGAATCTGACC+TGG | 0.642802 | 3.1:+27033186 | None:intergenic |
CATGTGGAGAAGGAGGCGCA+TGG | 0.648174 | 3.1:-27037277 | MS.gene45595:intron |
GAGGCTTCCAAAGATGCAGG+TGG | 0.655405 | 3.1:+27033600 | None:intergenic |
TTCCATCCTCACATGTAAGG+CGG | 0.658020 | 3.1:+27033767 | None:intergenic |
ACAAACTGTCCCCTCACACG+AGG | 0.662346 | 3.1:+27033009 | None:intergenic |
TGAAGCATGTGCTCAACAAG+GGG | 0.671878 | 3.1:-27033736 | MS.gene45595:CDS |
TACAATCATGTTCCACAAGG+CGG | 0.678482 | 3.1:-27033267 | MS.gene45595:CDS |
GGGGTAGGACATCATTCCGG+TGG | 0.679136 | 3.1:+27033236 | None:intergenic |
TCTGATGCATCCAAGAAATG+GGG | 0.684504 | 3.1:-27033454 | MS.gene45595:CDS |
TCTGATGCATGATCATCTGG+AGG | 0.693536 | 3.1:+27034773 | None:intergenic |
GAAGAGCGAACTAAGGATTG+GGG | 0.699832 | 3.1:-27033874 | MS.gene45595:CDS |
TATGTTGGCCTGTGACGGCG+CGG | 0.704656 | 3.1:-27038333 | MS.gene45595:CDS |
TCTCAAGCACTTAACAACAA+CGG | 0.708874 | 3.1:+27037365 | None:intergenic |
TAAGTGCTTGAGACTCGGAG+CGG | 0.719512 | 3.1:-27037355 | MS.gene45595:CDS |
ACAATGCCGCCTTACATGTG+AGG | 0.719839 | 3.1:-27033773 | MS.gene45595:CDS |
AGTGTCATCGGAGAACAGGG+TGG | 0.756718 | 3.1:+27035657 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAACAAATAATGATTTATTT+TGG | - | chr3.1:27036942-27036961 | MS.gene45595:intron | 10.0% |
!!! | TATTTTTAAAAAATTTGTAC+TGG | + | chr3.1:27034327-27034346 | None:intergenic | 10.0% |
!!! | TATTTTTTACATTATATTCA+AGG | + | chr3.1:27034535-27034554 | None:intergenic | 10.0% |
!!! | TCATTATTTGTTTAATTTTA+TGG | + | chr3.1:27036935-27036954 | None:intergenic | 10.0% |
!! | AAAAAATCTGTTGAAAATTT+GGG | + | chr3.1:27037248-27037267 | None:intergenic | 15.0% |
!! | AACTAAATCTTACTTATAAT+AGG | + | chr3.1:27033759-27033778 | None:intergenic | 15.0% |
!! | AATAATAAATGCTTATGAAA+AGG | - | chr3.1:27034920-27034939 | MS.gene45595:intron | 15.0% |
!! | AGATTTCTTAAATTAAACTT+TGG | - | chr3.1:27035784-27035803 | MS.gene45595:intron | 15.0% |
!! | ATAATAAATGCTTATGAAAA+GGG | - | chr3.1:27034921-27034940 | MS.gene45595:intron | 15.0% |
!! | ATATTTCATATCAAATCATA+GGG | - | chr3.1:27034635-27034654 | MS.gene45595:intron | 15.0% |
!! | TAAAAAATCTGTTGAAAATT+TGG | + | chr3.1:27037249-27037268 | None:intergenic | 15.0% |
!! | TTAATTTCATTCTTTAATGT+TGG | - | chr3.1:27033085-27033104 | MS.gene45595:CDS | 15.0% |
!! | TTCTAAATTTCTAAATACAA+TGG | + | chr3.1:27034189-27034208 | None:intergenic | 15.0% |
!!! | AAATTTTCAACAGATTTTTT+AGG | - | chr3.1:27037248-27037267 | MS.gene45595:intron | 15.0% |
!!! | AGTTTAATTTAAGAAATCTT+CGG | + | chr3.1:27035783-27035802 | None:intergenic | 15.0% |
!!! | ATTTAACTCAAGAATTTTAT+TGG | + | chr3.1:27033802-27033821 | None:intergenic | 15.0% |
!!! | TTTTTCTATCAATTAAAAAC+TGG | - | chr3.1:27033469-27033488 | MS.gene45595:CDS | 15.0% |
!! | AAAAAATTTGTACTGGAAAT+AGG | + | chr3.1:27034320-27034339 | None:intergenic | 20.0% |
!! | AAAAATCTGTTGAAAATTTG+GGG | + | chr3.1:27037247-27037266 | None:intergenic | 20.0% |
!! | AAAAATTTGTACTGGAAATA+GGG | + | chr3.1:27034319-27034338 | None:intergenic | 20.0% |
!! | AAACATTGTGCAATATTAAA+TGG | - | chr3.1:27034098-27034117 | MS.gene45595:intron | 20.0% |
!! | AAGATAGTAGTATTAATTAG+GGG | - | chr3.1:27034882-27034901 | MS.gene45595:intron | 20.0% |
!! | AATATCAGAGTATAAACATT+TGG | - | chr3.1:27033440-27033459 | MS.gene45595:CDS | 20.0% |
!! | ACAAGATAGTAGTATTAATT+AGG | - | chr3.1:27034880-27034899 | MS.gene45595:intron | 20.0% |
!! | ACATTAATACAAAAACAAAG+AGG | - | chr3.1:27036163-27036182 | MS.gene45595:intron | 20.0% |
!! | ACATTCCATATTATATTGTA+TGG | + | chr3.1:27035361-27035380 | None:intergenic | 20.0% |
!! | AGTTAAATCAAATTATGTTC+TGG | - | chr3.1:27033814-27033833 | MS.gene45595:CDS | 20.0% |
!! | ATATAATATGGAATGTAGAA+TGG | - | chr3.1:27035365-27035384 | MS.gene45595:intron | 20.0% |
!! | ATCAACCATACAATATAATA+TGG | - | chr3.1:27035353-27035372 | MS.gene45595:intron | 20.0% |
!! | ATTGAATATGATGAAAATGA+AGG | - | chr3.1:27038325-27038344 | MS.gene45595:CDS | 20.0% |
!! | ATTGCATTTACAAAGAAAAA+GGG | + | chr3.1:27035883-27035902 | None:intergenic | 20.0% |
!! | CAAGATAGTAGTATTAATTA+GGG | - | chr3.1:27034881-27034900 | MS.gene45595:intron | 20.0% |
!! | CATATTTCATATCAAATCAT+AGG | - | chr3.1:27034634-27034653 | MS.gene45595:intron | 20.0% |
!! | CTATGATTTGATATGAAATA+TGG | + | chr3.1:27034636-27034655 | None:intergenic | 20.0% |
!! | CTTTACTTATCATAATCATT+TGG | - | chr3.1:27034564-27034583 | MS.gene45595:intron | 20.0% |
!! | GTGAAAAACAATAAAAGATA+GGG | + | chr3.1:27033128-27033147 | None:intergenic | 20.0% |
!! | GTGATAACAAAAAATGAAAA+TGG | + | chr3.1:27034229-27034248 | None:intergenic | 20.0% |
!! | TAATAAATGCTTATGAAAAG+GGG | - | chr3.1:27034922-27034941 | MS.gene45595:intron | 20.0% |
!! | TATGAGGTCAATAATTATAA+GGG | + | chr3.1:27035065-27035084 | None:intergenic | 20.0% |
!! | TATTGCATTTACAAAGAAAA+AGG | + | chr3.1:27035884-27035903 | None:intergenic | 20.0% |
!! | TATTTCATATCAAATCATAG+GGG | - | chr3.1:27034636-27034655 | MS.gene45595:intron | 20.0% |
!! | TTATCCATATTATTTGTCAT+CGG | - | chr3.1:27037877-27037896 | MS.gene45595:intron | 20.0% |
!! | TTGAATATGATGAAAATGAA+GGG | - | chr3.1:27038326-27038345 | MS.gene45595:CDS | 20.0% |
!! | TTTCTTAAGAAATGTGAAAA+AGG | + | chr3.1:27034763-27034782 | None:intergenic | 20.0% |
!!! | AACTTTACTTAATTTTGCTT+CGG | + | chr3.1:27038128-27038147 | None:intergenic | 20.0% |
!!! | AATAGCTTTTATATTTTTGC+TGG | - | chr3.1:27035497-27035516 | MS.gene45595:intron | 20.0% |
!!! | AGATTTTCATATGAACTTAT+GGG | - | chr3.1:27035329-27035348 | MS.gene45595:intron | 20.0% |
!!! | ATTGATTTGTTTTATTCCTA+GGG | - | chr3.1:27033499-27033518 | MS.gene45595:CDS | 20.0% |
!!! | CAAAATTAAGTAAAGTTGAT+AGG | - | chr3.1:27038131-27038150 | MS.gene45595:intron | 20.0% |
!!! | CATAGATTAATCAATTTTCA+AGG | + | chr3.1:27035758-27035777 | None:intergenic | 20.0% |
!!! | GCAGCTTAAAATTTATTTTA+GGG | + | chr3.1:27036049-27036068 | None:intergenic | 20.0% |
!!! | TATGATAAATTGTTGATTAC+TGG | - | chr3.1:27035956-27035975 | MS.gene45595:intron | 20.0% |
!!! | TATGTATGTTCCTTTAAAAA+TGG | + | chr3.1:27035996-27036015 | None:intergenic | 20.0% |
!!! | TATTGATTTGTTTTATTCCT+AGG | - | chr3.1:27033498-27033517 | MS.gene45595:CDS | 20.0% |
!!! | TGAGTTTGAATTAATTTGAA+AGG | - | chr3.1:27034448-27034467 | MS.gene45595:intron | 20.0% |
!!! | TGCAGCTTAAAATTTATTTT+AGG | + | chr3.1:27036050-27036069 | None:intergenic | 20.0% |
!!! | TTCATTTTCATCATATTCAA+TGG | + | chr3.1:27038326-27038345 | None:intergenic | 20.0% |
! | AAGATTCATAGATATGAAGT+TGG | + | chr3.1:27034021-27034040 | None:intergenic | 25.0% |
! | AATACAAAAACAAAGAGGAA+GGG | - | chr3.1:27036168-27036187 | MS.gene45595:intron | 25.0% |
! | ACTAAAATTATCCTAGAGAA+TGG | + | chr3.1:27033061-27033080 | None:intergenic | 25.0% |
! | AGAAAATTAGGTATGTCAAT+CGG | - | chr3.1:27038209-27038228 | MS.gene45595:intron | 25.0% |
! | AGATTAGAAAGTAGAAACTA+TGG | + | chr3.1:27037065-27037084 | None:intergenic | 25.0% |
! | ATGAAACAGAATTGCTTAAA+GGG | - | chr3.1:27036711-27036730 | MS.gene45595:intron | 25.0% |
! | ATGGAATTCAATAACTAGAA+TGG | + | chr3.1:27036916-27036935 | None:intergenic | 25.0% |
! | CAAAAATCCATCATATAAAC+AGG | + | chr3.1:27033355-27033374 | None:intergenic | 25.0% |
! | CTAATGAACTCTTAAATTTG+TGG | - | chr3.1:27033957-27033976 | MS.gene45595:intron | 25.0% |
! | GGACGAAAATAAAATCAAAT+GGG | - | chr3.1:27034956-27034975 | MS.gene45595:intron | 25.0% |
! | GGTGAAAAACAATAAAAGAT+AGG | + | chr3.1:27033129-27033148 | None:intergenic | 25.0% |
! | GTATGAGGTCAATAATTATA+AGG | + | chr3.1:27035066-27035085 | None:intergenic | 25.0% |
! | GTTAAATTATGACTTTGATC+TGG | - | chr3.1:27035546-27035565 | MS.gene45595:intron | 25.0% |
! | TAAACATTCTAGATTCTCAT+CGG | - | chr3.1:27033195-27033214 | MS.gene45595:CDS | 25.0% |
! | TAATACAAAAACAAAGAGGA+AGG | - | chr3.1:27036167-27036186 | MS.gene45595:intron | 25.0% |
! | TATCCATATTATTTGTCATC+GGG | - | chr3.1:27037878-27037897 | MS.gene45595:intron | 25.0% |
! | TCAGAGAGAACAATTAAAAA+TGG | + | chr3.1:27037322-27037341 | None:intergenic | 25.0% |
! | TGGAATTCAATAACTAGAAT+GGG | + | chr3.1:27036915-27036934 | None:intergenic | 25.0% |
! | TTCTACTTTCTAATCTGAAA+TGG | - | chr3.1:27037069-27037088 | MS.gene45595:intron | 25.0% |
! | TTTAATACACATACAAGCAA+AGG | + | chr3.1:27034839-27034858 | None:intergenic | 25.0% |
! | TTTATCATACCAATAACTTG+TGG | + | chr3.1:27035945-27035964 | None:intergenic | 25.0% |
!! | AAGTTATATAGTGGAATTGA+TGG | - | chr3.1:27036615-27036634 | MS.gene45595:intron | 25.0% |
!! | AGCTATTTCAATTTGAAATC+AGG | + | chr3.1:27035484-27035503 | None:intergenic | 25.0% |
!! | ATAAAATTTTATTCAGCCTC+AGG | + | chr3.1:27037275-27037294 | None:intergenic | 25.0% |
!! | ATATTGATTAATTTCCACCA+TGG | - | chr3.1:27033244-27033263 | MS.gene45595:CDS | 25.0% |
!! | ATTTCAATTTGAAATCAGGA+AGG | + | chr3.1:27035480-27035499 | None:intergenic | 25.0% |
!! | GAGATTTTCATATGAACTTA+TGG | - | chr3.1:27035328-27035347 | MS.gene45595:intron | 25.0% |
!! | GATTTTCATAGACATAAAGA+TGG | + | chr3.1:27035203-27035222 | None:intergenic | 25.0% |
!! | GATTTTCATATGAACTTATG+GGG | - | chr3.1:27035330-27035349 | MS.gene45595:intron | 25.0% |
!! | GTATAACAGTGTCTAAAATT+TGG | - | chr3.1:27033412-27033431 | MS.gene45595:CDS | 25.0% |
!! | GTTAGTGAGTCTTATATTAA+GGG | + | chr3.1:27034682-27034701 | None:intergenic | 25.0% |
!! | TATTTTCTCTTCTCTTAATC+CGG | - | chr3.1:27036842-27036861 | MS.gene45595:intron | 25.0% |
!! | TTAGCATTGAAGTTATATAG+TGG | - | chr3.1:27036606-27036625 | MS.gene45595:intron | 25.0% |
!! | TTATCATACCAATAACTTGT+GGG | + | chr3.1:27035944-27035963 | None:intergenic | 25.0% |
!! | TTTTCATCATATTCAATGGA+AGG | + | chr3.1:27038322-27038341 | None:intergenic | 25.0% |
!!! | AGTTGGTGACAAATTAATTA+TGG | + | chr3.1:27034066-27034085 | None:intergenic | 25.0% |
!!! | ATGCAAATGACCATTTTTAA+AGG | - | chr3.1:27035983-27036002 | MS.gene45595:intron | 25.0% |
!!! | CTGTTTATATGATGGATTTT+TGG | - | chr3.1:27033353-27033372 | MS.gene45595:CDS | 25.0% |
!!! | GACTTTTTCAGATTATAAGT+TGG | - | chr3.1:27035277-27035296 | MS.gene45595:intron | 25.0% |
!!! | GCTGTTTTGATAAGAAAATT+AGG | - | chr3.1:27038197-27038216 | MS.gene45595:intron | 25.0% |
!!! | TGTATATTAGCTTTTCGAAT+TGG | - | chr3.1:27035039-27035058 | MS.gene45595:intron | 25.0% |
!!! | TTGATTTGTTTTATTCCTAG+GGG | - | chr3.1:27033500-27033519 | MS.gene45595:CDS | 25.0% |
!!! | TTTATTGTTTTTCACCTTTG+AGG | - | chr3.1:27033133-27033152 | MS.gene45595:CDS | 25.0% |
AAAATTATCCTAGAGAATGG+CGG | + | chr3.1:27033058-27033077 | None:intergenic | 30.0% | |
AAACATTCTAGATTCTCATC+GGG | - | chr3.1:27033196-27033215 | MS.gene45595:CDS | 30.0% | |
AAGAAATGTGAAAAAGGCAA+TGG | + | chr3.1:27034757-27034776 | None:intergenic | 30.0% | |
AATCACATAATGCAAGTATG+AGG | + | chr3.1:27035081-27035100 | None:intergenic | 30.0% | |
ACATAAATTGCCAAAAAGGT+GGG | + | chr3.1:27036982-27037001 | None:intergenic | 30.0% | |
ACATATTCATTGGGTAATAG+GGG | + | chr3.1:27038048-27038067 | None:intergenic | 30.0% | |
ACATGTAACTGAATTACTTG+TGG | - | chr3.1:27037020-27037039 | MS.gene45595:intron | 30.0% | |
AGAAATGTGAAAAAGGCAAT+GGG | + | chr3.1:27034756-27034775 | None:intergenic | 30.0% | |
AGATGTTCAAAACATTGATG+AGG | + | chr3.1:27033841-27033860 | None:intergenic | 30.0% | |
ATCATTTGGTCAATCTTGTA+TGG | - | chr3.1:27034578-27034597 | MS.gene45595:intron | 30.0% | |
ATGAAAAGGGGTTTACATTT+AGG | - | chr3.1:27034934-27034953 | MS.gene45595:intron | 30.0% | |
ATGCTAAAAAGAAACCTTGA+AGG | - | chr3.1:27037452-27037471 | MS.gene45595:intron | 30.0% | |
CACAAATACATCAAAAACCT+CGG | + | chr3.1:27032989-27033008 | None:intergenic | 30.0% | |
CACATATTCATTGGGTAATA+GGG | + | chr3.1:27038049-27038068 | None:intergenic | 30.0% | |
CACTGTTATACTGTTATCAA+TGG | + | chr3.1:27033403-27033422 | None:intergenic | 30.0% | |
CATGAAACAGAATTGCTTAA+AGG | - | chr3.1:27036710-27036729 | MS.gene45595:intron | 30.0% | |
GCAATATTAAATGGATGTAG+AGG | - | chr3.1:27034107-27034126 | MS.gene45595:intron | 30.0% | |
GGGACGAAAATAAAATCAAA+TGG | - | chr3.1:27034955-27034974 | MS.gene45595:intron | 30.0% | |
GTCTTATACATCCAAGAAAT+GGG | - | chr3.1:27037726-27037745 | MS.gene45595:intron | 30.0% | |
GTTGTAAGCACATATTCATT+GGG | + | chr3.1:27038057-27038076 | None:intergenic | 30.0% | |
TGAAAAGGGGTTTACATTTA+GGG | - | chr3.1:27034935-27034954 | MS.gene45595:intron | 30.0% | |
TGCTAAAAAGAAACCTTGAA+GGG | - | chr3.1:27037453-27037472 | MS.gene45595:intron | 30.0% | |
TTAGCAATAGTAGACTGAAA+AGG | + | chr3.1:27036450-27036469 | None:intergenic | 30.0% | |
TTCAAACTCACATTTGCATA+AGG | + | chr3.1:27034438-27034457 | None:intergenic | 30.0% | |
TTTAAATACTGACAATCTGC+AGG | + | chr3.1:27034415-27034434 | None:intergenic | 30.0% | |
TTTCTTAATACCCATGAATC+AGG | + | chr3.1:27034704-27034723 | None:intergenic | 30.0% | |
! | AACAATACTTTGGAAGTAGT+TGG | + | chr3.1:27036885-27036904 | None:intergenic | 30.0% |
! | ACGAAAGGGTCTTATATATA+GGG | - | chr3.1:27035126-27035145 | MS.gene45595:intron | 30.0% |
! | AGTCTTATACATCCAAGAAA+TGG | - | chr3.1:27037725-27037744 | MS.gene45595:intron | 30.0% |
! | ATAGGTGTTGCAATTTATGA+TGG | + | chr3.1:27033298-27033317 | None:intergenic | 30.0% |
! | ATTTCCAACAAAATCCCTTT+TGG | + | chr3.1:27037102-27037121 | None:intergenic | 30.0% |
! | GCAAATTTTCTTCTTCGTAA+CGG | + | chr3.1:27037697-27037716 | None:intergenic | 30.0% |
! | GGTTAGTGAGTCTTATATTA+AGG | + | chr3.1:27034683-27034702 | None:intergenic | 30.0% |
! | TAAGATGAATGGTGTTAATG+TGG | - | chr3.1:27038279-27038298 | MS.gene45595:intron | 30.0% |
! | TACGAAAGGGTCTTATATAT+AGG | - | chr3.1:27035125-27035144 | MS.gene45595:intron | 30.0% |
! | TATCATACCAATAACTTGTG+GGG | + | chr3.1:27035943-27035962 | None:intergenic | 30.0% |
! | TATTAATTAGGGGTATGCTT+AGG | - | chr3.1:27034892-27034911 | MS.gene45595:intron | 30.0% |
! | TTTTCCTAAAACCTTGATTG+TGG | + | chr3.1:27032955-27032974 | None:intergenic | 30.0% |
!!! | ACAATCAAGGTTTTAGGAAA+AGG | - | chr3.1:27032954-27032973 | MS.gene45595:CDS | 30.0% |
!!! | TATTTTAGGGCAACTAATTC+AGG | + | chr3.1:27036036-27036055 | None:intergenic | 30.0% |
!!! | TGATTTGTTTTATTCCTAGG+GGG | - | chr3.1:27033501-27033520 | MS.gene45595:CDS | 30.0% |
!!! | TTATATGATGGATTTTTGGC+TGG | - | chr3.1:27033357-27033376 | MS.gene45595:CDS | 30.0% |
AAACAGAATTGCTTAAAGGG+AGG | - | chr3.1:27036714-27036733 | MS.gene45595:intron | 35.0% | |
AAACTGACGTCAATTGTAGT+TGG | - | chr3.1:27035223-27035242 | MS.gene45595:intron | 35.0% | |
AACAGAATTGCTTAAAGGGA+GGG | - | chr3.1:27036715-27036734 | MS.gene45595:intron | 35.0% | |
AACTGACGTCAATTGTAGTT+GGG | - | chr3.1:27035224-27035243 | MS.gene45595:intron | 35.0% | |
AAGAGTTCATTAGTGCGTAA+AGG | + | chr3.1:27033950-27033969 | None:intergenic | 35.0% | |
AAGTTGACAGAACAAAACGA+AGG | + | chr3.1:27034154-27034173 | None:intergenic | 35.0% | |
AATCTTGTATGGAGTCATAG+GGG | - | chr3.1:27034589-27034608 | MS.gene45595:intron | 35.0% | |
ACTCCCGATGACAAATAATA+TGG | + | chr3.1:27037884-27037903 | None:intergenic | 35.0% | |
AGAAACATGGTAGGTTTGAT+AGG | + | chr3.1:27033316-27033335 | None:intergenic | 35.0% | |
AGCAAGCAATAAACTTGTCA+GGG | - | chr3.1:27035015-27035034 | MS.gene45595:intron | 35.0% | |
ATCATTATGCAGTATGTAGC+TGG | + | chr3.1:27036339-27036358 | None:intergenic | 35.0% | |
ATCCACCAATACTTACGAAA+GGG | - | chr3.1:27035112-27035131 | MS.gene45595:intron | 35.0% | |
ATGAATATGTGCTTACAACC+AGG | - | chr3.1:27038058-27038077 | MS.gene45595:intron | 35.0% | |
ATGTAGAGGACTAACTAACT+TGG | - | chr3.1:27034121-27034140 | MS.gene45595:intron | 35.0% | |
ATGTAGCTGGGTGAATAAAA+AGG | + | chr3.1:27036326-27036345 | None:intergenic | 35.0% | |
CAAATGGGTGCTTAGATATA+GGG | - | chr3.1:27034971-27034990 | MS.gene45595:intron | 35.0% | |
CAATCTTGTATGGAGTCATA+GGG | - | chr3.1:27034588-27034607 | MS.gene45595:intron | 35.0% | |
CAGTTTGTCAGTAAGATGAA+TGG | - | chr3.1:27038268-27038287 | MS.gene45595:intron | 35.0% | |
CATAAATTGCCAAAAAGGTG+GGG | + | chr3.1:27036981-27037000 | None:intergenic | 35.0% | |
CATATGAAAATCTCCTGTGA+AGG | + | chr3.1:27035322-27035341 | None:intergenic | 35.0% | |
CTCTCAATAGATAAAGAACC+AGG | + | chr3.1:27037632-27037651 | None:intergenic | 35.0% | |
CTGTTTGTATTGTTATCGCT+AGG | + | chr3.1:27035583-27035602 | None:intergenic | 35.0% | |
GAAATGGCTTCAATCCAAAA+GGG | - | chr3.1:27037085-27037104 | MS.gene45595:intron | 35.0% | |
GACATAAATTGCCAAAAAGG+TGG | + | chr3.1:27036983-27037002 | None:intergenic | 35.0% | |
GATCTCGAAGTATGCAAAAA+TGG | - | chr3.1:27037554-27037573 | MS.gene45595:CDS | 35.0% | |
GCACATATTCATTGGGTAAT+AGG | + | chr3.1:27038050-27038069 | None:intergenic | 35.0% | |
GCAGACATAAATTGCCAAAA+AGG | + | chr3.1:27036986-27037005 | None:intergenic | 35.0% | |
GCATCTCAAATGTCGTAATT+AGG | + | chr3.1:27037155-27037174 | None:intergenic | 35.0% | |
GGAAACTATAGATCTCATAC+TGG | - | chr3.1:27033656-27033675 | MS.gene45595:CDS | 35.0% | |
GGGTTGTTCTAACAATACTT+TGG | + | chr3.1:27036895-27036914 | None:intergenic | 35.0% | |
GGTGTTAATGTGGATCTTAA+TGG | - | chr3.1:27038289-27038308 | MS.gene45595:intron | 35.0% | |
GGTTGTAAGCACATATTCAT+TGG | + | chr3.1:27038058-27038077 | None:intergenic | 35.0% | |
GTACTCTCTTGAACATTTCT+TGG | + | chr3.1:27035181-27035200 | None:intergenic | 35.0% | |
GTCTTATATATAGGGACAGA+AGG | - | chr3.1:27035134-27035153 | MS.gene45595:intron | 35.0% | |
GTCTTATATTAAGGGACAGA+GGG | + | chr3.1:27034674-27034693 | None:intergenic | 35.0% | |
GTTGTGAGATATTAGATGAG+AGG | - | chr3.1:27034492-27034511 | MS.gene45595:intron | 35.0% | |
TAAGACCCTTTCGTAAGTAT+TGG | + | chr3.1:27035120-27035139 | None:intergenic | 35.0% | |
TAGCAAAATAGTTGGAAGGA+GGG | - | chr3.1:27036779-27036798 | MS.gene45595:intron | 35.0% | |
TATCCACCAATACTTACGAA+AGG | - | chr3.1:27035111-27035130 | MS.gene45595:intron | 35.0% | |
TCAAATGGGTGCTTAGATAT+AGG | - | chr3.1:27034970-27034989 | MS.gene45595:intron | 35.0% | |
TCAACCATTACATAACACCA+TGG | + | chr3.1:27033264-27033283 | None:intergenic | 35.0% | |
TCAATCTTGTATGGAGTCAT+AGG | - | chr3.1:27034587-27034606 | MS.gene45595:intron | 35.0% | |
TCATCATATTCAATGGAAGG+AGG | + | chr3.1:27038319-27038338 | None:intergenic | 35.0% | |
TCATGTTATGATGCCTTCAT+CGG | - | chr3.1:27037907-27037926 | MS.gene45595:intron | 35.0% | |
TCATTATGCAGTATGTAGCT+GGG | + | chr3.1:27036338-27036357 | None:intergenic | 35.0% | |
TCTAAATACAATGGTTGCGA+TGG | + | chr3.1:27034180-27034199 | None:intergenic | 35.0% | |
TCTCAAGCACTTAACAACAA+CGG | + | chr3.1:27033900-27033919 | None:intergenic | 35.0% | |
TGAAATGGCTTCAATCCAAA+AGG | - | chr3.1:27037084-27037103 | MS.gene45595:intron | 35.0% | |
TGATATGAAATATGGCTTCC+AGG | + | chr3.1:27034628-27034647 | None:intergenic | 35.0% | |
TGTTTACAGACACAGTAAGT+TGG | + | chr3.1:27034083-27034102 | None:intergenic | 35.0% | |
! | AGTCTTATATTAAGGGACAG+AGG | + | chr3.1:27034675-27034694 | None:intergenic | 35.0% |
! | CAATCCAAAAGGGATTTTGT+TGG | - | chr3.1:27037095-27037114 | MS.gene45595:intron | 35.0% |
!! | GTTTCTAGTTTCTACACGAT+TGG | + | chr3.1:27036241-27036260 | None:intergenic | 35.0% |
!! | TTATATTTTTGCTGGCAGCT+TGG | - | chr3.1:27035505-27035524 | MS.gene45595:intron | 35.0% |
!!! | AACAGATTTTTTAGGTCCTG+AGG | - | chr3.1:27037256-27037275 | MS.gene45595:intron | 35.0% |
AACTTCCATCCTCACATGTA+AGG | + | chr3.1:27037501-27037520 | None:intergenic | 40.0% | |
AAGAAGAGCGAACTAAGGAT+TGG | - | chr3.1:27037386-27037405 | MS.gene45595:CDS | 40.0% | |
AAGAGACAATCATCCTTCAC+AGG | - | chr3.1:27035306-27035325 | MS.gene45595:intron | 40.0% | |
AAGGGTCACAATAGGAAAGT+GGG | - | chr3.1:27036186-27036205 | MS.gene45595:intron | 40.0% | |
AATAATCCTCCCCAAGTACT+AGG | + | chr3.1:27036688-27036707 | None:intergenic | 40.0% | |
AATGTCGTAATTAGGCGACA+AGG | + | chr3.1:27037147-27037166 | None:intergenic | 40.0% | |
ACCATTACATAACACCATGG+TGG | + | chr3.1:27033261-27033280 | None:intergenic | 40.0% | |
AGAAGAGCGAACTAAGGATT+GGG | - | chr3.1:27037387-27037406 | MS.gene45595:CDS | 40.0% | |
AGACTCACTAACCTGATTCA+TGG | - | chr3.1:27034690-27034709 | MS.gene45595:intron | 40.0% | |
AGCAAAATAGTTGGAAGGAG+GGG | - | chr3.1:27036780-27036799 | MS.gene45595:intron | 40.0% | |
AGCAGAATCAAGCTAGACTA+TGG | + | chr3.1:27035402-27035421 | None:intergenic | 40.0% | |
AGGACAGGTAGCAAAATAGT+TGG | - | chr3.1:27036771-27036790 | MS.gene45595:intron | 40.0% | |
AGTAGTTGGCCATTACTGAT+AGG | + | chr3.1:27036871-27036890 | None:intergenic | 40.0% | |
AGTTGTTGGGCTCAAAGTAT+GGG | - | chr3.1:27036659-27036678 | MS.gene45595:intron | 40.0% | |
ATCCTTAGTTCGCTCTTCTT+TGG | + | chr3.1:27037386-27037405 | None:intergenic | 40.0% | |
ATCTTCATGCCCTTCTTCTT+CGG | + | chr3.1:27033696-27033715 | None:intergenic | 40.0% | |
ATGAAGCATGTGCTCAACAA+GGG | - | chr3.1:27037525-27037544 | MS.gene45595:CDS | 40.0% | |
ATGTCGTAATTAGGCGACAA+GGG | + | chr3.1:27037146-27037165 | None:intergenic | 40.0% | |
ATGTTAGATCTTTCACGCTC+AGG | + | chr3.1:27037842-27037861 | None:intergenic | 40.0% | |
ATTCAACACATGGACCTCAA+AGG | + | chr3.1:27033150-27033169 | None:intergenic | 40.0% | |
ATTCATTGGGTAATAGGGGT+AGG | + | chr3.1:27038044-27038063 | None:intergenic | 40.0% | |
ATTGCTTAAAGGGAGGGAAT+TGG | - | chr3.1:27036721-27036740 | MS.gene45595:intron | 40.0% | |
CACTACAATCATGTTCCACA+AGG | - | chr3.1:27037992-27038011 | MS.gene45595:intron | 40.0% | |
CAGCAAGCAATAAACTTGTC+AGG | - | chr3.1:27035014-27035033 | MS.gene45595:intron | 40.0% | |
CAGGTAGCAAAATAGTTGGA+AGG | - | chr3.1:27036775-27036794 | MS.gene45595:intron | 40.0% | |
CATATCGAGCTCAGAACAAT+AGG | + | chr3.1:27037753-27037772 | None:intergenic | 40.0% | |
CATTCTGATGCATGATCATC+TGG | + | chr3.1:27036495-27036514 | None:intergenic | 40.0% | |
CGAGTTATCATCAGTGTCAT+CGG | + | chr3.1:27035620-27035639 | None:intergenic | 40.0% | |
CTCGTCACATATTCAACACA+TGG | + | chr3.1:27033160-27033179 | None:intergenic | 40.0% | |
GAACAATAGGTCCCATTTCT+TGG | + | chr3.1:27037740-27037759 | None:intergenic | 40.0% | |
GACTCACTAACCTGATTCAT+GGG | - | chr3.1:27034691-27034710 | MS.gene45595:intron | 40.0% | |
GTAGCAAAATAGTTGGAAGG+AGG | - | chr3.1:27036778-27036797 | MS.gene45595:intron | 40.0% | |
GTCAAAGTTTGCACTCTGAA+AGG | + | chr3.1:27035827-27035846 | None:intergenic | 40.0% | |
GTCTGATGCATCCAAGAAAT+GGG | - | chr3.1:27037807-27037826 | MS.gene45595:intron | 40.0% | |
GTTGTTAAGTGCTTGAGACT+CGG | - | chr3.1:27033902-27033921 | MS.gene45595:intron | 40.0% | |
TAAACTTCCTGATCTGCTCA+TGG | + | chr3.1:27036085-27036104 | None:intergenic | 40.0% | |
TAAATTTGTGGACGCACATG+TGG | - | chr3.1:27033969-27033988 | MS.gene45595:intron | 40.0% | |
TACAATCATGTTCCACAAGG+CGG | - | chr3.1:27037995-27038014 | MS.gene45595:intron | 40.0% | |
TAGTGGAATTGATGGAACCT+GGG | - | chr3.1:27036623-27036642 | MS.gene45595:intron | 40.0% | |
TCATTTACTCCATGGACATC+AGG | + | chr3.1:27036522-27036541 | None:intergenic | 40.0% | |
TCTGATGCATCCAAGAAATG+GGG | - | chr3.1:27037808-27037827 | MS.gene45595:intron | 40.0% | |
TGTCTGATGCATCCAAGAAA+TGG | - | chr3.1:27037806-27037825 | MS.gene45595:intron | 40.0% | |
TTCGCTGATCATTTACTCCA+TGG | + | chr3.1:27036530-27036549 | None:intergenic | 40.0% | |
TTCTGCGCAATTCTTTGTCT+CGG | + | chr3.1:27033734-27033753 | None:intergenic | 40.0% | |
TTGAAAACCATGAGCAGATC+AGG | - | chr3.1:27036075-27036094 | MS.gene45595:intron | 40.0% | |
! | AAGTTTGCACTCTGAAAGGT+TGG | + | chr3.1:27035823-27035842 | None:intergenic | 40.0% |
! | ACACACACGACACTTTTATC+TGG | - | chr3.1:27035434-27035453 | MS.gene45595:intron | 40.0% |
! | ACATTTGAGATGCCTTGTGT+TGG | - | chr3.1:27037162-27037181 | MS.gene45595:intron | 40.0% |
! | ATAGTGGAATTGATGGAACC+TGG | - | chr3.1:27036622-27036641 | MS.gene45595:intron | 40.0% |
! | CATCATATAAACAGGCGTTG+CGG | + | chr3.1:27033347-27033366 | None:intergenic | 40.0% |
! | TTCGTAACGGTTTTTCTGTG+AGG | + | chr3.1:27037684-27037703 | None:intergenic | 40.0% |
! | TTGTGATGCAAATTTTGCGC+AGG | + | chr3.1:27037785-27037804 | None:intergenic | 40.0% |
!! | AGAAGCACTATTCAAGAGAC+AGG | - | chr3.1:27035643-27035662 | MS.gene45595:CDS | 40.0% |
!! | GGAAACAACTTGCTGAAAGA+CGG | - | chr3.1:27038230-27038249 | MS.gene45595:intron | 40.0% |
!! | TCCACCATGGTGTTATGTAA+TGG | - | chr3.1:27033257-27033276 | MS.gene45595:CDS | 40.0% |
AATTGATGGAACCTGGGGAA+TGG | - | chr3.1:27036629-27036648 | MS.gene45595:intron | 45.0% | |
ACCAGGTATACTATTGCTGC+TGG | + | chr3.1:27037615-27037634 | None:intergenic | 45.0% | |
AGATTCCTTCAGGTCAGTCA+TGG | - | chr3.1:27038083-27038102 | MS.gene45595:intron | 45.0% | |
AGGGCAACTAATTCAGGAGT+TGG | + | chr3.1:27036030-27036049 | None:intergenic | 45.0% | |
AGGGTCACAATAGGAAAGTG+GGG | - | chr3.1:27036187-27036206 | MS.gene45595:intron | 45.0% | |
AGTATGGGAAGCCTAGTACT+TGG | - | chr3.1:27036674-27036693 | MS.gene45595:intron | 45.0% | |
AGTGATGTCTGCACAAGATG+AGG | - | chr3.1:27033871-27033890 | MS.gene45595:CDS | 45.0% | |
AGTGGAATTGATGGAACCTG+GGG | - | chr3.1:27036624-27036643 | MS.gene45595:intron | 45.0% | |
ATAGGGGTAGGACATCATTC+CGG | + | chr3.1:27038032-27038051 | None:intergenic | 45.0% | |
ATCAGTCCAACAAGAGCAAG+AGG | - | chr3.1:27035669-27035688 | MS.gene45595:CDS | 45.0% | |
ATCAGTGTCATCGGAGAACA+GGG | + | chr3.1:27035611-27035630 | None:intergenic | 45.0% | |
ATCCGGATGCCTATCAGTAA+TGG | - | chr3.1:27036859-27036878 | MS.gene45595:intron | 45.0% | |
ATGTACCAGCATGATTCTGC+AGG | + | chr3.1:27037961-27037980 | None:intergenic | 45.0% | |
ATTGATGGAACCTGGGGAAT+GGG | - | chr3.1:27036630-27036649 | MS.gene45595:intron | 45.0% | |
CAAAGAGGAAGGGTCACAAT+AGG | - | chr3.1:27036178-27036197 | MS.gene45595:intron | 45.0% | |
CAAGCTAGACTATGGTTGAG+AGG | + | chr3.1:27035394-27035413 | None:intergenic | 45.0% | |
CAAGGGGCAGATCACAATAA+AGG | + | chr3.1:27037129-27037148 | None:intergenic | 45.0% | |
CACTTTACGTTAAACCCCCT+AGG | + | chr3.1:27033518-27033537 | None:intergenic | 45.0% | |
CAGCATGAACAATCCCTTCA+AGG | + | chr3.1:27037469-27037488 | None:intergenic | 45.0% | |
CAGGTATACTATTGCTGCTG+GGG | + | chr3.1:27037613-27037632 | None:intergenic | 45.0% | |
CAGTTGTTGGGCTCAAAGTA+TGG | - | chr3.1:27036658-27036677 | MS.gene45595:intron | 45.0% | |
CATGAAGCATGTGCTCAACA+AGG | - | chr3.1:27037524-27037543 | MS.gene45595:CDS | 45.0% | |
CCAGGTATACTATTGCTGCT+GGG | + | chr3.1:27037614-27037633 | None:intergenic | 45.0% | |
CGCAACGCCTGTTTATATGA+TGG | - | chr3.1:27033345-27033364 | MS.gene45595:CDS | 45.0% | |
CTAGGGGGTTTAACGTAAAG+TGG | - | chr3.1:27033516-27033535 | MS.gene45595:CDS | 45.0% | |
CTATGTGCCCCACAAGTTAT+TGG | - | chr3.1:27035933-27035952 | MS.gene45595:intron | 45.0% | |
CTCCAAAGAAGAGCGAACTA+AGG | - | chr3.1:27037381-27037400 | MS.gene45595:CDS | 45.0% | |
GAAGAGCGAACTAAGGATTG+GGG | - | chr3.1:27037388-27037407 | MS.gene45595:CDS | 45.0% | |
GAAGGGTCACAATAGGAAAG+TGG | - | chr3.1:27036185-27036204 | MS.gene45595:intron | 45.0% | |
GCAATGGGTGCCTACATTAA+GGG | + | chr3.1:27034741-27034760 | None:intergenic | 45.0% | |
GGACAATGAACCCCATTTCT+TGG | + | chr3.1:27037821-27037840 | None:intergenic | 45.0% | |
GGAGTAAATGATCAGCGAAC+AGG | - | chr3.1:27036531-27036550 | MS.gene45595:intron | 45.0% | |
GGGGTTTAACGTAAAGTGGT+TGG | - | chr3.1:27033520-27033539 | MS.gene45595:CDS | 45.0% | |
GTATGGGAAGCCTAGTACTT+GGG | - | chr3.1:27036675-27036694 | MS.gene45595:intron | 45.0% | |
TAGTGTGATCATCGCGATCA+AGG | - | chr3.1:27033013-27033032 | MS.gene45595:CDS | 45.0% | |
TATGGGAAGCCTAGTACTTG+GGG | - | chr3.1:27036676-27036695 | MS.gene45595:intron | 45.0% | |
TCTGATGCATGATCATCTGG+AGG | + | chr3.1:27036492-27036511 | None:intergenic | 45.0% | |
TCTGCGCAATTCTTTGTCTC+GGG | + | chr3.1:27033733-27033752 | None:intergenic | 45.0% | |
TGAAGCATGTGCTCAACAAG+GGG | - | chr3.1:27037526-27037545 | MS.gene45595:CDS | 45.0% | |
TGATGCACTGAATGCAGAGA+AGG | - | chr3.1:27033635-27033654 | MS.gene45595:CDS | 45.0% | |
TGCCTACATTAAGGGATGGA+GGG | + | chr3.1:27034733-27034752 | None:intergenic | 45.0% | |
TGCTAATGCTGATGCTGTTG+AGG | - | chr3.1:27036464-27036483 | MS.gene45595:intron | 45.0% | |
TGCTTAGATATAGGGACGGA+GGG | - | chr3.1:27034979-27034998 | MS.gene45595:intron | 45.0% | |
TGGGTGCTTAGATATAGGGA+CGG | - | chr3.1:27034975-27034994 | MS.gene45595:intron | 45.0% | |
TGTCGTAATTAGGCGACAAG+GGG | + | chr3.1:27037145-27037164 | None:intergenic | 45.0% | |
TTCCATCCTCACATGTAAGG+CGG | + | chr3.1:27037498-27037517 | None:intergenic | 45.0% | |
TTGTACTCCACCTGCATCTT+TGG | - | chr3.1:27037655-27037674 | MS.gene45595:CDS | 45.0% | |
! | ACCTACCATGTTTCTGCCAT+AGG | - | chr3.1:27033321-27033340 | MS.gene45595:CDS | 45.0% |
! | ATTGGTTGCACTTGCTGAGT+TGG | - | chr3.1:27036739-27036758 | MS.gene45595:intron | 45.0% |
! | CTCATCTTTCCCCACCTTTT+TGG | - | chr3.1:27036969-27036988 | MS.gene45595:intron | 45.0% |
! | GATCTCATACTGGCTGAAGT+TGG | - | chr3.1:27033666-27033685 | MS.gene45595:CDS | 45.0% |
! | TGATACATTTGCGCCGATGA+AGG | + | chr3.1:27037923-27037942 | None:intergenic | 45.0% |
!! | GACCCTTTCGTAAGTATTGG+TGG | + | chr3.1:27035117-27035136 | None:intergenic | 45.0% |
!!! | ATCACCTCTGGTTTTGTGCA+TGG | + | chr3.1:27036218-27036237 | None:intergenic | 45.0% |
ACAATGCCGCCTTACATGTG+AGG | - | chr3.1:27037489-27037508 | MS.gene45595:intron | 50.0% | |
ACCCTCTCAAAGCCAACACA+AGG | + | chr3.1:27037177-27037196 | None:intergenic | 50.0% | |
AGCGAACTAAGGATTGGGGT+TGG | - | chr3.1:27037392-27037411 | MS.gene45595:CDS | 50.0% | |
AGGGGATGCTTACTATGTCC+TGG | - | chr3.1:27034607-27034626 | MS.gene45595:intron | 50.0% | |
CAACCAGGTCAGATTCCTTC+AGG | - | chr3.1:27038073-27038092 | MS.gene45595:intron | 50.0% | |
CAGGAAGGTCTATGCGAGAA+TGG | + | chr3.1:27035465-27035484 | None:intergenic | 50.0% | |
CATCAGTGTCATCGGAGAAC+AGG | + | chr3.1:27035612-27035631 | None:intergenic | 50.0% | |
CCCAGCAGCAATAGTATACC+TGG | - | chr3.1:27037611-27037630 | MS.gene45595:CDS | 50.0% | |
CGAACTAAGGATTGGGGTTG+GGG | - | chr3.1:27037394-27037413 | MS.gene45595:intron | 50.0% | |
CTACACGATTGGATCACCTC+TGG | + | chr3.1:27036230-27036249 | None:intergenic | 50.0% | |
CTCCCTCCATCCCTTAATGT+AGG | - | chr3.1:27034728-27034747 | MS.gene45595:intron | 50.0% | |
GAATGGGTGGGTCAGTTGTT+GGG | - | chr3.1:27036646-27036665 | MS.gene45595:intron | 50.0% | |
GAATGTCAGCCTGATGTCCA+TGG | - | chr3.1:27036510-27036529 | MS.gene45595:intron | 50.0% | |
GACATCATTCCGGTGGTATG+AGG | + | chr3.1:27038022-27038041 | None:intergenic | 50.0% | |
GCCTATGGCAGAAACATGGT+AGG | + | chr3.1:27033325-27033344 | None:intergenic | 50.0% | |
GCGAACTAAGGATTGGGGTT+GGG | - | chr3.1:27037393-27037412 | MS.gene45595:intron | 50.0% | |
GGCAATGGGTGCCTACATTA+AGG | + | chr3.1:27034742-27034761 | None:intergenic | 50.0% | |
GGCCATTACTGATAGGCATC+CGG | + | chr3.1:27036864-27036883 | None:intergenic | 50.0% | |
GGGGCAGATCACAATAAAGG+TGG | + | chr3.1:27037126-27037145 | None:intergenic | 50.0% | |
GTGCCTACATTAAGGGATGG+AGG | + | chr3.1:27034734-27034753 | None:intergenic | 50.0% | |
GTGCTTAGATATAGGGACGG+AGG | - | chr3.1:27034978-27034997 | MS.gene45595:intron | 50.0% | |
GTGTCCATGCACAAAACCAG+AGG | - | chr3.1:27036211-27036230 | MS.gene45595:intron | 50.0% | |
TAAGTGCTTGAGACTCGGAG+CGG | - | chr3.1:27033907-27033926 | MS.gene45595:intron | 50.0% | |
TCATGCCCTTCTTCTTCGGA+AGG | + | chr3.1:27033692-27033711 | None:intergenic | 50.0% | |
TCCTAGAGAATGGCGGTCAA+AGG | + | chr3.1:27033051-27033070 | None:intergenic | 50.0% | |
TCCTTTGACCGCCATTCTCT+AGG | - | chr3.1:27033047-27033066 | MS.gene45595:CDS | 50.0% | |
TCGGATGAACTTCCGAAGGA+TGG | + | chr3.1:27038109-27038128 | None:intergenic | 50.0% | |
TGACCTGAAGGAATCTGACC+TGG | + | chr3.1:27038079-27038098 | None:intergenic | 50.0% | |
TGCTTCGGATGAACTTCCGA+AGG | + | chr3.1:27038113-27038132 | None:intergenic | 50.0% | |
TGGGTGCCTACATTAAGGGA+TGG | + | chr3.1:27034737-27034756 | None:intergenic | 50.0% | |
TGTGAGGCTTCCAAAGATGC+AGG | + | chr3.1:27037668-27037687 | None:intergenic | 50.0% | |
! | GCGGCCACAATCAAGGTTTT+AGG | - | chr3.1:27032948-27032967 | MS.gene45595:CDS | 50.0% |
! | TTGCACTTGCTGAGTTGGCA+GGG | - | chr3.1:27036744-27036763 | MS.gene45595:intron | 50.0% |
!! | AGTTGGCCTTCCGAAGAAGA+AGG | - | chr3.1:27033683-27033702 | MS.gene45595:CDS | 50.0% |
!! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr3.1:27037209-27037228 | None:intergenic | 50.0% |
!! | GCCTTGTGTTGGCTTTGAGA+GGG | - | chr3.1:27037173-27037192 | MS.gene45595:intron | 50.0% |
!! | GTTGGCCTTCCGAAGAAGAA+GGG | - | chr3.1:27033684-27033703 | MS.gene45595:CDS | 50.0% |
!! | TGCCTTGTGTTGGCTTTGAG+AGG | - | chr3.1:27037172-27037191 | MS.gene45595:intron | 50.0% |
!! | TTGTGTTGGCTTTGAGAGGG+TGG | - | chr3.1:27037176-27037195 | MS.gene45595:intron | 50.0% |
ACAAACTGTCCCCTCACACG+AGG | + | chr3.1:27038256-27038275 | None:intergenic | 55.0% | |
AGTGTCATCGGAGAACAGGG+TGG | + | chr3.1:27035608-27035627 | None:intergenic | 55.0% | |
ATGGAACCTGGGGAATGGGT+GGG | - | chr3.1:27036634-27036653 | MS.gene45595:intron | 55.0% | |
CACGACCTGCAGAATCATGC+TGG | - | chr3.1:27037953-27037972 | MS.gene45595:intron | 55.0% | |
CAGCATGATTCTGCAGGTCG+TGG | + | chr3.1:27037955-27037974 | None:intergenic | 55.0% | |
CGCTCACCTCTTGCTCTTGT+TGG | + | chr3.1:27035678-27035697 | None:intergenic | 55.0% | |
GAGGCTTCCAAAGATGCAGG+TGG | + | chr3.1:27037665-27037684 | None:intergenic | 55.0% | |
GATGGCCATGACTGACCTGA+AGG | + | chr3.1:27038091-27038110 | None:intergenic | 55.0% | |
GCACTCCTCACCTTACAAGC+CGG | - | chr3.1:27037201-27037220 | MS.gene45595:intron | 55.0% | |
GGAAAAGGTCTGTGACACCG+AGG | - | chr3.1:27032969-27032988 | MS.gene45595:CDS | 55.0% | |
GGAATGGGTGGGTCAGTTGT+TGG | - | chr3.1:27036645-27036664 | MS.gene45595:intron | 55.0% | |
GGTCAGTCATGGCCATCCTT+CGG | - | chr3.1:27038094-27038113 | MS.gene45595:intron | 55.0% | |
TGAAAGACGGCCTCGTGTGA+GGG | - | chr3.1:27038243-27038262 | MS.gene45595:intron | 55.0% | |
TGCCGCCTTACATGTGAGGA+TGG | - | chr3.1:27037493-27037512 | MS.gene45595:intron | 55.0% | |
TGCGGCCTATGGCAGAAACA+TGG | + | chr3.1:27033329-27033348 | None:intergenic | 55.0% | |
TGTGGACGCACATGTGGAGA+AGG | - | chr3.1:27033975-27033994 | MS.gene45595:intron | 55.0% | |
! | AGTTGGCAGGGTGTTAGGAC+AGG | - | chr3.1:27036756-27036775 | MS.gene45595:intron | 55.0% |
! | GTTGCACTTGCTGAGTTGGC+AGG | - | chr3.1:27036743-27036762 | MS.gene45595:intron | 55.0% |
! | TAAACAGGCGTTGCGGCCTA+TGG | + | chr3.1:27033340-27033359 | None:intergenic | 55.0% |
! | TGCTGAGTTGGCAGGGTGTT+AGG | - | chr3.1:27036751-27036770 | MS.gene45595:intron | 55.0% |
!! | TGTTGGCTTTGAGAGGGTGG+AGG | - | chr3.1:27037179-27037198 | MS.gene45595:intron | 55.0% |
AACTGACCCACCCATTCCCC+AGG | + | chr3.1:27036643-27036662 | None:intergenic | 60.0% | |
CAAGGCGGTCCTCATACCAC+CGG | - | chr3.1:27038010-27038029 | MS.gene45595:intron | 60.0% | |
CTGAAAGACGGCCTCGTGTG+AGG | - | chr3.1:27038242-27038261 | MS.gene45595:intron | 60.0% | |
GAAAGACGGCCTCGTGTGAG+GGG | - | chr3.1:27038244-27038263 | MS.gene45595:intron | 60.0% | |
GATGGAACCTGGGGAATGGG+TGG | - | chr3.1:27036633-27036652 | MS.gene45595:intron | 60.0% | |
GGACGCACATGTGGAGAAGG+AGG | - | chr3.1:27033978-27033997 | MS.gene45595:intron | 60.0% | |
GGGAAGCCTAGTACTTGGGG+AGG | - | chr3.1:27036679-27036698 | MS.gene45595:intron | 60.0% | |
GGGGTAGGACATCATTCCGG+TGG | + | chr3.1:27038029-27038048 | None:intergenic | 60.0% | |
GTGGTATGAGGACCGCCTTG+TGG | + | chr3.1:27038010-27038029 | None:intergenic | 60.0% | |
! | CATGTGGAGAAGGAGGCGCA+TGG | - | chr3.1:27033985-27034004 | MS.gene45595:intron | 60.0% |
TGACGGCGCGGCCACAATCA+AGG | - | chr3.1:27032941-27032960 | MS.gene45595:CDS | 65.0% | |
GATTGTGGCCGCGCCGTCAC+AGG | + | chr3.1:27032940-27032959 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 27032930 | 27038354 | 27032930 | ID=MS.gene45595 |
chr3.1 | mRNA | 27032930 | 27038354 | 27032930 | ID=MS.gene45595.t1;Parent=MS.gene45595 |
chr3.1 | exon | 27038309 | 27038354 | 27038309 | ID=MS.gene45595.t1.exon1;Parent=MS.gene45595.t1 |
chr3.1 | CDS | 27038309 | 27038354 | 27038309 | ID=cds.MS.gene45595.t1;Parent=MS.gene45595.t1 |
chr3.1 | exon | 27037519 | 27037680 | 27037519 | ID=MS.gene45595.t1.exon2;Parent=MS.gene45595.t1 |
chr3.1 | CDS | 27037519 | 27037680 | 27037519 | ID=cds.MS.gene45595.t1;Parent=MS.gene45595.t1 |
chr3.1 | exon | 27037278 | 27037411 | 27037278 | ID=MS.gene45595.t1.exon3;Parent=MS.gene45595.t1 |
chr3.1 | CDS | 27037278 | 27037411 | 27037278 | ID=cds.MS.gene45595.t1;Parent=MS.gene45595.t1 |
chr3.1 | exon | 27035594 | 27035761 | 27035594 | ID=MS.gene45595.t1.exon4;Parent=MS.gene45595.t1 |
chr3.1 | CDS | 27035594 | 27035761 | 27035594 | ID=cds.MS.gene45595.t1;Parent=MS.gene45595.t1 |
chr3.1 | exon | 27034732 | 27034828 | 27034732 | ID=MS.gene45595.t1.exon5;Parent=MS.gene45595.t1 |
chr3.1 | CDS | 27034732 | 27034828 | 27034732 | ID=cds.MS.gene45595.t1;Parent=MS.gene45595.t1 |
chr3.1 | exon | 27032930 | 27033918 | 27032930 | ID=MS.gene45595.t1.exon6;Parent=MS.gene45595.t1 |
chr3.1 | CDS | 27032930 | 27033918 | 27032930 | ID=cds.MS.gene45595.t1;Parent=MS.gene45595.t1 |
Gene Sequence |
Protein sequence |