Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46439.t1 | XP_003590324.1 | 88.6 | 315 | 25 | 5 | 1 | 308 | 1 | 311 | 2.90E-127 | 464.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46439.t1 | P19684 | 56.2 | 217 | 91 | 1 | 95 | 307 | 107 | 323 | 4.9e-67 | 256.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46439.t1 | G7I8I9 | 88.6 | 315 | 25 | 5 | 1 | 308 | 1 | 311 | 2.1e-127 | 464.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055390 | MS.gene46439 | 0.81703 | 4.07E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011357 | MS.gene46439 | PPI |
| MS.gene056826 | MS.gene46439 | PPI |
| MS.gene039090 | MS.gene46439 | PPI |
| MS.gene48301 | MS.gene46439 | PPI |
| MS.gene84278 | MS.gene46439 | PPI |
| MS.gene058655 | MS.gene46439 | PPI |
| MS.gene85443 | MS.gene46439 | PPI |
| MS.gene46439 | MS.gene84276 | PPI |
| MS.gene76479 | MS.gene46439 | PPI |
| MS.gene039084 | MS.gene46439 | PPI |
| MS.gene059960 | MS.gene46439 | PPI |
| MS.gene058523 | MS.gene46439 | PPI |
| MS.gene058521 | MS.gene46439 | PPI |
| MS.gene001351 | MS.gene46439 | PPI |
| MS.gene54146 | MS.gene46439 | PPI |
| MS.gene019679 | MS.gene46439 | PPI |
| MS.gene033319 | MS.gene46439 | PPI |
| MS.gene023961 | MS.gene46439 | PPI |
| MS.gene068702 | MS.gene46439 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46439.t1 | MTR_1g056520 | 82.540 | 315 | 44 | 5 | 1 | 308 | 1 | 311 | 1.58e-178 | 495 |
| MS.gene46439.t1 | MTR_7g106440 | 55.108 | 323 | 115 | 10 | 1 | 303 | 1 | 313 | 2.81e-108 | 318 |
| MS.gene46439.t1 | MTR_1g045510 | 41.935 | 186 | 100 | 1 | 96 | 281 | 107 | 284 | 1.09e-44 | 154 |
| MS.gene46439.t1 | MTR_3g027140 | 42.045 | 176 | 102 | 0 | 102 | 277 | 60 | 235 | 1.32e-44 | 152 |
| MS.gene46439.t1 | MTR_1g064230 | 35.769 | 260 | 145 | 5 | 38 | 277 | 15 | 272 | 1.34e-41 | 145 |
| MS.gene46439.t1 | MTR_3g075500 | 37.557 | 221 | 129 | 4 | 62 | 279 | 70 | 284 | 2.80e-39 | 140 |
| MS.gene46439.t1 | MTR_4g104470 | 38.122 | 181 | 107 | 2 | 97 | 277 | 117 | 292 | 9.92e-38 | 136 |
| MS.gene46439.t1 | MTR_3g075500 | 37.864 | 206 | 119 | 4 | 62 | 264 | 70 | 269 | 2.37e-35 | 129 |
| MS.gene46439.t1 | MTR_5g030020 | 38.983 | 177 | 103 | 3 | 102 | 277 | 96 | 268 | 2.81e-29 | 114 |
| MS.gene46439.t1 | MTR_2g097960 | 28.934 | 197 | 129 | 3 | 88 | 281 | 1 | 189 | 7.55e-22 | 95.5 |
| MS.gene46439.t1 | MTR_2g022950 | 28.636 | 220 | 142 | 6 | 93 | 308 | 51 | 259 | 8.60e-22 | 93.2 |
| MS.gene46439.t1 | MTR_2g022950 | 29.612 | 206 | 130 | 6 | 93 | 294 | 51 | 245 | 1.86e-21 | 92.0 |
| MS.gene46439.t1 | MTR_2g022950 | 29.949 | 197 | 126 | 6 | 93 | 285 | 51 | 239 | 1.16e-20 | 91.7 |
| MS.gene46439.t1 | MTR_3g099590 | 28.804 | 184 | 122 | 4 | 93 | 274 | 80 | 256 | 1.53e-20 | 89.7 |
| MS.gene46439.t1 | MTR_3g065190 | 28.495 | 186 | 120 | 3 | 93 | 277 | 16 | 189 | 2.68e-19 | 87.4 |
| MS.gene46439.t1 | MTR_4g131970 | 29.444 | 180 | 114 | 4 | 102 | 277 | 74 | 244 | 1.69e-18 | 85.5 |
| MS.gene46439.t1 | MTR_4g124940 | 25.551 | 227 | 148 | 4 | 83 | 302 | 27 | 239 | 6.67e-18 | 84.0 |
| MS.gene46439.t1 | MTR_7g102730 | 32.544 | 169 | 105 | 5 | 104 | 272 | 100 | 259 | 1.40e-17 | 83.6 |
| MS.gene46439.t1 | MTR_7g102730 | 27.000 | 200 | 125 | 5 | 90 | 277 | 177 | 367 | 1.17e-15 | 77.8 |
| MS.gene46439.t1 | MTR_7g102730 | 29.878 | 164 | 103 | 2 | 104 | 267 | 12 | 163 | 9.84e-15 | 75.1 |
| MS.gene46439.t1 | MTR_4g086600 | 28.191 | 188 | 129 | 3 | 102 | 286 | 116 | 300 | 2.79e-17 | 82.4 |
| MS.gene46439.t1 | MTR_4g085540 | 28.283 | 198 | 120 | 4 | 104 | 297 | 36 | 215 | 8.66e-17 | 81.3 |
| MS.gene46439.t1 | MTR_4g085540 | 30.392 | 204 | 111 | 6 | 93 | 277 | 200 | 391 | 4.98e-16 | 79.0 |
| MS.gene46439.t1 | MTR_1g061870 | 28.814 | 177 | 119 | 4 | 104 | 277 | 196 | 368 | 1.66e-16 | 80.1 |
| MS.gene46439.t1 | MTR_1g061870 | 22.703 | 185 | 131 | 2 | 104 | 288 | 17 | 189 | 1.20e-13 | 71.6 |
| MS.gene46439.t1 | MTR_7g013740 | 41.772 | 79 | 46 | 0 | 199 | 277 | 38 | 116 | 7.09e-16 | 73.9 |
| MS.gene46439.t1 | MTR_1g020080 | 26.486 | 185 | 125 | 4 | 100 | 281 | 95 | 271 | 2.03e-15 | 75.9 |
| MS.gene46439.t1 | MTR_3g080130 | 34.831 | 89 | 56 | 1 | 201 | 289 | 36 | 122 | 3.06e-15 | 71.6 |
| MS.gene46439.t1 | MTR_3g101370 | 24.868 | 189 | 132 | 3 | 96 | 281 | 87 | 268 | 3.12e-15 | 75.1 |
| MS.gene46439.t1 | MTR_3g102040 | 26.768 | 198 | 123 | 4 | 104 | 297 | 26 | 205 | 8.93e-15 | 75.1 |
| MS.gene46439.t1 | MTR_7g013730 | 36.471 | 85 | 54 | 0 | 199 | 283 | 38 | 122 | 9.85e-15 | 72.8 |
| MS.gene46439.t1 | MTR_7g013730 | 33.721 | 86 | 57 | 0 | 92 | 177 | 30 | 115 | 2.87e-11 | 63.2 |
| MS.gene46439.t1 | MTR_1g019150 | 26.263 | 198 | 124 | 4 | 104 | 297 | 34 | 213 | 1.03e-14 | 75.1 |
| MS.gene46439.t1 | MTR_1g019150 | 29.744 | 195 | 117 | 5 | 99 | 282 | 208 | 393 | 5.90e-14 | 72.8 |
| MS.gene46439.t1 | MTR_3g109090 | 24.020 | 204 | 141 | 2 | 82 | 285 | 24 | 213 | 1.33e-14 | 74.3 |
| MS.gene46439.t1 | MTR_3g109090 | 24.020 | 204 | 141 | 2 | 82 | 285 | 40 | 229 | 1.34e-14 | 74.3 |
| MS.gene46439.t1 | MTR_1g020080 | 25.405 | 185 | 127 | 3 | 100 | 281 | 95 | 271 | 1.54e-14 | 73.9 |
| MS.gene46439.t1 | MTR_3g101370 | 24.490 | 196 | 124 | 4 | 96 | 281 | 87 | 268 | 2.61e-14 | 73.2 |
| MS.gene46439.t1 | MTR_6g040190 | 24.590 | 183 | 126 | 3 | 104 | 286 | 27 | 197 | 1.98e-13 | 70.9 |
| MS.gene46439.t1 | MTR_6g040190 | 26.154 | 195 | 126 | 5 | 94 | 277 | 192 | 379 | 6.49e-11 | 63.5 |
| MS.gene46439.t1 | MTR_1g097440 | 26.786 | 168 | 103 | 3 | 104 | 267 | 32 | 183 | 2.34e-13 | 70.9 |
| MS.gene46439.t1 | MTR_1g097440 | 27.811 | 169 | 109 | 5 | 101 | 267 | 117 | 274 | 2.67e-12 | 67.8 |
| MS.gene46439.t1 | MTR_1g097440 | 29.082 | 196 | 107 | 8 | 104 | 282 | 211 | 391 | 1.88e-11 | 65.1 |
| MS.gene46439.t1 | MTR_8g022050 | 23.348 | 227 | 153 | 4 | 83 | 302 | 43 | 255 | 3.62e-13 | 70.1 |
| MS.gene46439.t1 | MTR_8g022050 | 25.521 | 192 | 117 | 3 | 94 | 263 | 139 | 326 | 1.80e-11 | 64.7 |
| MS.gene46439.t1 | MTR_7g118230 | 29.834 | 181 | 87 | 5 | 103 | 279 | 44 | 188 | 5.06e-13 | 68.9 |
| MS.gene46439.t1 | MTR_1g115375 | 25.824 | 182 | 125 | 6 | 103 | 283 | 221 | 393 | 9.00e-13 | 68.9 |
| MS.gene46439.t1 | MTR_3g084040 | 39.506 | 81 | 48 | 1 | 199 | 279 | 34 | 113 | 1.21e-12 | 64.7 |
| MS.gene46439.t1 | MTR_4g109540 | 35.366 | 82 | 51 | 1 | 202 | 283 | 43 | 122 | 2.17e-12 | 66.6 |
| MS.gene46439.t1 | MTR_4g109540 | 36.782 | 87 | 54 | 1 | 98 | 183 | 38 | 124 | 7.71e-12 | 64.7 |
| MS.gene46439.t1 | MTR_2g026180 | 27.604 | 192 | 127 | 5 | 103 | 287 | 5 | 191 | 4.14e-12 | 67.0 |
| MS.gene46439.t1 | MTR_4g122650 | 27.108 | 166 | 106 | 6 | 103 | 265 | 89 | 242 | 6.45e-12 | 66.6 |
| MS.gene46439.t1 | MTR_4g070080 | 30.864 | 81 | 56 | 0 | 197 | 277 | 2 | 82 | 7.25e-12 | 62.0 |
| MS.gene46439.t1 | MTR_7g094660 | 26.699 | 206 | 131 | 6 | 81 | 277 | 622 | 816 | 1.11e-11 | 65.9 |
| MS.gene46439.t1 | MTR_3g005670 | 24.885 | 217 | 139 | 6 | 92 | 286 | 279 | 493 | 1.12e-11 | 65.9 |
| MS.gene46439.t1 | MTR_3g005670 | 24.885 | 217 | 139 | 6 | 92 | 286 | 281 | 495 | 1.20e-11 | 65.5 |
| MS.gene46439.t1 | MTR_4g070080 | 30.864 | 81 | 56 | 0 | 197 | 277 | 2 | 82 | 1.57e-11 | 62.0 |
| MS.gene46439.t1 | MTR_6g004810 | 25.946 | 185 | 123 | 5 | 103 | 286 | 46 | 217 | 2.16e-11 | 64.3 |
| MS.gene46439.t1 | MTR_4g088010 | 23.784 | 185 | 128 | 3 | 99 | 283 | 73 | 244 | 2.22e-11 | 64.3 |
| MS.gene46439.t1 | MTR_4g070190 | 30.864 | 81 | 56 | 0 | 197 | 277 | 4 | 84 | 2.42e-11 | 61.6 |
| MS.gene46439.t1 | MTR_4g031680 | 25.112 | 223 | 140 | 7 | 92 | 289 | 231 | 451 | 2.49e-11 | 64.7 |
| MS.gene46439.t1 | MTR_4g070140 | 33.735 | 83 | 55 | 0 | 195 | 277 | 2 | 84 | 2.61e-11 | 62.0 |
| MS.gene46439.t1 | MTR_6g040070 | 25.414 | 181 | 125 | 5 | 104 | 277 | 107 | 284 | 2.83e-11 | 64.7 |
| MS.gene46439.t1 | MTR_3g005670 | 24.885 | 217 | 139 | 6 | 92 | 286 | 281 | 495 | 3.40e-11 | 64.3 |
| MS.gene46439.t1 | MTR_3g005670 | 24.885 | 217 | 139 | 6 | 92 | 286 | 279 | 493 | 3.78e-11 | 63.9 |
| MS.gene46439.t1 | MTR_3g005670 | 24.885 | 217 | 139 | 6 | 92 | 286 | 281 | 495 | 3.82e-11 | 63.9 |
| MS.gene46439.t1 | MTR_3g005670 | 24.885 | 217 | 139 | 6 | 92 | 286 | 279 | 493 | 4.09e-11 | 63.9 |
| MS.gene46439.t1 | MTR_3g005670 | 24.885 | 217 | 139 | 6 | 92 | 286 | 281 | 495 | 4.24e-11 | 63.9 |
| MS.gene46439.t1 | MTR_8g092550 | 25.000 | 184 | 130 | 3 | 102 | 280 | 202 | 382 | 6.10e-11 | 63.5 |
| MS.gene46439.t1 | MTR_4g109540 | 40.299 | 67 | 38 | 1 | 217 | 283 | 66 | 130 | 7.43e-11 | 62.0 |
| MS.gene46439.t1 | MTR_2g013130 | 26.066 | 211 | 126 | 6 | 92 | 277 | 49 | 254 | 9.02e-11 | 62.8 |
| MS.gene46439.t1 | MTR_2g013130 | 26.066 | 211 | 126 | 6 | 92 | 277 | 6 | 211 | 9.64e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46439.t1 | AT3G52380 | 59.391 | 197 | 74 | 2 | 98 | 288 | 112 | 308 | 1.98e-84 | 257 |
| MS.gene46439.t1 | AT1G60000 | 42.857 | 175 | 93 | 1 | 103 | 277 | 86 | 253 | 1.03e-43 | 150 |
| MS.gene46439.t1 | AT1G60000 | 38.750 | 80 | 49 | 0 | 103 | 182 | 178 | 257 | 3.15e-12 | 65.9 |
| MS.gene46439.t1 | AT2G37220 | 36.449 | 214 | 122 | 2 | 78 | 277 | 67 | 280 | 1.44e-41 | 145 |
| MS.gene46439.t1 | AT5G50250 | 34.799 | 273 | 157 | 8 | 12 | 277 | 25 | 283 | 4.47e-40 | 142 |
| MS.gene46439.t1 | AT2G35410 | 41.038 | 212 | 110 | 5 | 71 | 278 | 72 | 272 | 1.27e-39 | 141 |
| MS.gene46439.t1 | AT3G52150 | 36.538 | 260 | 134 | 8 | 37 | 277 | 6 | 253 | 3.07e-39 | 139 |
| MS.gene46439.t1 | AT3G52150 | 36.538 | 260 | 134 | 8 | 37 | 277 | 6 | 253 | 3.07e-39 | 139 |
| MS.gene46439.t1 | AT4G24770 | 38.503 | 187 | 109 | 5 | 97 | 283 | 145 | 325 | 2.92e-36 | 133 |
| MS.gene46439.t1 | AT4G24770 | 38.503 | 187 | 109 | 5 | 97 | 283 | 145 | 325 | 2.92e-36 | 133 |
| MS.gene46439.t1 | AT1G01080 | 36.047 | 172 | 104 | 3 | 104 | 270 | 110 | 280 | 2.47e-25 | 103 |
| MS.gene46439.t1 | AT1G01080 | 36.416 | 173 | 103 | 4 | 104 | 270 | 110 | 281 | 1.41e-24 | 100 |
| MS.gene46439.t1 | AT1G01080 | 35.057 | 174 | 105 | 3 | 95 | 260 | 98 | 271 | 9.53e-24 | 98.6 |
| MS.gene46439.t1 | AT5G19350 | 27.869 | 183 | 120 | 4 | 102 | 281 | 24 | 197 | 7.10e-20 | 89.7 |
| MS.gene46439.t1 | AT5G19350 | 27.869 | 183 | 120 | 4 | 102 | 281 | 24 | 197 | 7.78e-20 | 89.7 |
| MS.gene46439.t1 | AT1G54080 | 25.551 | 227 | 148 | 4 | 83 | 302 | 44 | 256 | 8.41e-18 | 83.6 |
| MS.gene46439.t1 | AT4G27000 | 27.451 | 204 | 132 | 6 | 102 | 299 | 80 | 273 | 1.52e-17 | 82.8 |
| MS.gene46439.t1 | AT2G23350 | 29.193 | 161 | 102 | 2 | 104 | 264 | 48 | 196 | 1.88e-17 | 83.2 |
| MS.gene46439.t1 | AT2G23350 | 31.795 | 195 | 120 | 5 | 93 | 277 | 212 | 403 | 1.62e-15 | 77.4 |
| MS.gene46439.t1 | AT2G23350 | 30.435 | 161 | 103 | 5 | 104 | 264 | 136 | 287 | 1.54e-12 | 68.6 |
| MS.gene46439.t1 | AT4G09040 | 28.571 | 182 | 119 | 4 | 97 | 274 | 89 | 263 | 3.58e-17 | 80.9 |
| MS.gene46439.t1 | AT4G09040 | 28.977 | 176 | 114 | 4 | 103 | 274 | 35 | 203 | 4.70e-17 | 79.3 |
| MS.gene46439.t1 | AT3G14100 | 26.316 | 228 | 147 | 4 | 83 | 303 | 40 | 253 | 4.81e-17 | 81.6 |
| MS.gene46439.t1 | AT2G18510 | 26.882 | 186 | 123 | 3 | 93 | 277 | 16 | 189 | 5.19e-17 | 80.9 |
| MS.gene46439.t1 | AT1G54080 | 25.541 | 231 | 147 | 5 | 83 | 302 | 44 | 260 | 1.85e-16 | 79.7 |
| MS.gene46439.t1 | AT5G54900 | 25.373 | 201 | 137 | 5 | 102 | 297 | 60 | 252 | 1.95e-16 | 79.3 |
| MS.gene46439.t1 | AT3G55340 | 27.500 | 200 | 130 | 7 | 89 | 281 | 149 | 340 | 2.27e-16 | 79.7 |
| MS.gene46439.t1 | AT1G47490 | 27.749 | 191 | 124 | 5 | 94 | 278 | 93 | 275 | 2.27e-16 | 78.6 |
| MS.gene46439.t1 | AT1G11650 | 25.806 | 217 | 137 | 5 | 94 | 296 | 54 | 260 | 3.44e-16 | 77.8 |
| MS.gene46439.t1 | AT3G16380 | 29.442 | 197 | 130 | 6 | 87 | 277 | 186 | 379 | 5.07e-16 | 79.0 |
| MS.gene46439.t1 | AT3G16380 | 25.907 | 193 | 128 | 4 | 80 | 272 | 4 | 181 | 4.78e-12 | 66.6 |
| MS.gene46439.t1 | AT3G16380 | 28.729 | 181 | 117 | 6 | 104 | 282 | 114 | 284 | 1.33e-11 | 65.5 |
| MS.gene46439.t1 | AT1G49760 | 30.120 | 166 | 96 | 4 | 104 | 265 | 47 | 196 | 5.38e-16 | 79.0 |
| MS.gene46439.t1 | AT1G49760 | 29.949 | 197 | 111 | 4 | 96 | 277 | 218 | 402 | 2.50e-14 | 73.9 |
| MS.gene46439.t1 | AT1G49760 | 27.108 | 166 | 102 | 5 | 104 | 264 | 135 | 286 | 8.04e-12 | 66.2 |
| MS.gene46439.t1 | AT1G49760 | 30.120 | 166 | 96 | 4 | 104 | 265 | 47 | 196 | 5.38e-16 | 79.0 |
| MS.gene46439.t1 | AT1G49760 | 29.949 | 197 | 111 | 4 | 96 | 277 | 218 | 402 | 2.50e-14 | 73.9 |
| MS.gene46439.t1 | AT1G49760 | 27.108 | 166 | 102 | 5 | 104 | 264 | 135 | 286 | 8.04e-12 | 66.2 |
| MS.gene46439.t1 | AT3G53460 | 51.852 | 81 | 38 | 1 | 103 | 182 | 100 | 180 | 5.95e-16 | 77.8 |
| MS.gene46439.t1 | AT3G53460 | 36.364 | 77 | 49 | 0 | 201 | 277 | 257 | 333 | 1.14e-14 | 73.9 |
| MS.gene46439.t1 | AT3G53460 | 36.486 | 74 | 47 | 0 | 103 | 176 | 258 | 331 | 9.89e-11 | 62.4 |
| MS.gene46439.t1 | AT3G53460 | 51.852 | 81 | 38 | 1 | 103 | 182 | 100 | 180 | 5.95e-16 | 77.8 |
| MS.gene46439.t1 | AT3G53460 | 36.364 | 77 | 49 | 0 | 201 | 277 | 257 | 333 | 1.14e-14 | 73.9 |
| MS.gene46439.t1 | AT3G53460 | 36.486 | 74 | 47 | 0 | 103 | 176 | 258 | 331 | 9.89e-11 | 62.4 |
| MS.gene46439.t1 | AT3G53460 | 51.852 | 81 | 38 | 1 | 103 | 182 | 100 | 180 | 5.95e-16 | 77.8 |
| MS.gene46439.t1 | AT3G53460 | 36.364 | 77 | 49 | 0 | 201 | 277 | 257 | 333 | 1.14e-14 | 73.9 |
| MS.gene46439.t1 | AT3G53460 | 36.486 | 74 | 47 | 0 | 103 | 176 | 258 | 331 | 9.89e-11 | 62.4 |
| MS.gene46439.t1 | AT3G19130 | 28.804 | 184 | 119 | 4 | 102 | 281 | 108 | 283 | 7.06e-16 | 78.2 |
| MS.gene46439.t1 | AT1G11650 | 25.806 | 217 | 137 | 5 | 94 | 296 | 54 | 260 | 8.54e-16 | 77.8 |
| MS.gene46439.t1 | AT1G47490 | 27.749 | 191 | 124 | 5 | 94 | 278 | 93 | 275 | 1.55e-15 | 77.0 |
| MS.gene46439.t1 | AT4G34110 | 27.778 | 162 | 105 | 2 | 104 | 265 | 38 | 187 | 1.60e-15 | 77.4 |
| MS.gene46439.t1 | AT4G34110 | 28.261 | 230 | 139 | 8 | 68 | 277 | 170 | 393 | 8.96e-14 | 72.0 |
| MS.gene46439.t1 | AT4G34110 | 29.193 | 161 | 105 | 4 | 104 | 264 | 126 | 277 | 1.17e-13 | 71.6 |
| MS.gene46439.t1 | AT2G36660 | 27.941 | 204 | 132 | 6 | 104 | 299 | 203 | 399 | 2.49e-15 | 76.6 |
| MS.gene46439.t1 | AT4G13850 | 40.000 | 85 | 49 | 1 | 202 | 286 | 36 | 118 | 8.78e-15 | 70.9 |
| MS.gene46439.t1 | AT4G13850 | 40.000 | 85 | 49 | 1 | 202 | 286 | 36 | 118 | 1.08e-14 | 70.9 |
| MS.gene46439.t1 | AT4G13850 | 40.000 | 85 | 49 | 1 | 202 | 286 | 36 | 118 | 1.20e-14 | 70.9 |
| MS.gene46439.t1 | AT3G53460 | 36.364 | 77 | 49 | 0 | 201 | 277 | 278 | 354 | 1.36e-14 | 73.9 |
| MS.gene46439.t1 | AT3G53460 | 55.556 | 63 | 28 | 0 | 103 | 165 | 100 | 162 | 2.32e-13 | 70.1 |
| MS.gene46439.t1 | AT1G17370 | 24.554 | 224 | 148 | 4 | 83 | 299 | 35 | 244 | 1.73e-14 | 73.9 |
| MS.gene46439.t1 | AT1G22760 | 29.609 | 179 | 119 | 3 | 104 | 277 | 231 | 407 | 1.85e-14 | 74.3 |
| MS.gene46439.t1 | AT1G22760 | 27.439 | 164 | 112 | 3 | 104 | 267 | 138 | 294 | 2.09e-13 | 71.2 |
| MS.gene46439.t1 | AT1G22760 | 27.108 | 166 | 100 | 4 | 104 | 265 | 51 | 199 | 5.66e-11 | 63.5 |
| MS.gene46439.t1 | AT3G15010 | 27.000 | 200 | 131 | 4 | 89 | 288 | 69 | 253 | 7.71e-14 | 72.0 |
| MS.gene46439.t1 | AT3G15010 | 27.000 | 200 | 131 | 4 | 89 | 288 | 69 | 253 | 7.71e-14 | 72.0 |
| MS.gene46439.t1 | AT3G08000 | 36.364 | 88 | 55 | 1 | 202 | 289 | 42 | 128 | 8.21e-14 | 68.2 |
| MS.gene46439.t1 | AT4G13850 | 39.759 | 83 | 48 | 1 | 202 | 284 | 36 | 116 | 1.08e-13 | 67.4 |
| MS.gene46439.t1 | AT1G17370 | 24.664 | 223 | 147 | 4 | 83 | 298 | 35 | 243 | 1.10e-13 | 71.6 |
| MS.gene46439.t1 | AT1G49600 | 28.261 | 184 | 120 | 4 | 102 | 281 | 119 | 294 | 1.59e-13 | 71.2 |
| MS.gene46439.t1 | AT1G49600 | 28.261 | 184 | 120 | 4 | 102 | 281 | 119 | 294 | 1.59e-13 | 71.2 |
| MS.gene46439.t1 | AT1G34140 | 30.366 | 191 | 103 | 7 | 104 | 277 | 121 | 298 | 1.99e-13 | 70.9 |
| MS.gene46439.t1 | AT1G34140 | 29.327 | 208 | 116 | 6 | 104 | 308 | 33 | 212 | 9.76e-13 | 68.6 |
| MS.gene46439.t1 | AT1G49600 | 28.261 | 184 | 120 | 4 | 102 | 281 | 119 | 294 | 2.61e-13 | 70.5 |
| MS.gene46439.t1 | AT1G47500 | 25.789 | 190 | 127 | 5 | 94 | 277 | 95 | 276 | 3.32e-13 | 69.3 |
| MS.gene46439.t1 | AT3G23830 | 36.471 | 85 | 52 | 1 | 202 | 286 | 36 | 118 | 5.77e-13 | 65.5 |
| MS.gene46439.t1 | AT3G23830 | 36.471 | 85 | 52 | 1 | 202 | 286 | 36 | 118 | 5.77e-13 | 65.5 |
| MS.gene46439.t1 | AT5G40490 | 25.778 | 225 | 141 | 6 | 70 | 285 | 6 | 213 | 6.78e-13 | 69.3 |
| MS.gene46439.t1 | AT1G71770 | 27.174 | 184 | 117 | 4 | 104 | 277 | 241 | 417 | 8.32e-13 | 69.3 |
| MS.gene46439.t1 | AT1G71770 | 27.711 | 166 | 99 | 4 | 104 | 265 | 61 | 209 | 1.76e-11 | 65.1 |
| MS.gene46439.t1 | AT1G71770 | 27.174 | 184 | 117 | 4 | 104 | 277 | 241 | 417 | 8.32e-13 | 69.3 |
| MS.gene46439.t1 | AT1G71770 | 27.711 | 166 | 99 | 4 | 104 | 265 | 61 | 209 | 1.76e-11 | 65.1 |
| MS.gene46439.t1 | AT1G47500 | 25.789 | 190 | 127 | 5 | 94 | 277 | 95 | 276 | 9.35e-13 | 68.9 |
| MS.gene46439.t1 | AT5G61030 | 35.802 | 81 | 52 | 0 | 199 | 279 | 38 | 118 | 1.78e-12 | 67.4 |
| MS.gene46439.t1 | AT5G61030 | 35.484 | 93 | 60 | 0 | 86 | 178 | 24 | 116 | 4.08e-12 | 66.2 |
| MS.gene46439.t1 | AT5G61030 | 35.802 | 81 | 52 | 0 | 199 | 279 | 38 | 118 | 1.78e-12 | 67.4 |
| MS.gene46439.t1 | AT5G61030 | 35.484 | 93 | 60 | 0 | 86 | 178 | 24 | 116 | 4.08e-12 | 66.2 |
| MS.gene46439.t1 | AT1G17640 | 27.848 | 158 | 106 | 3 | 103 | 260 | 67 | 216 | 1.94e-12 | 67.4 |
| MS.gene46439.t1 | AT1G17640 | 27.848 | 158 | 106 | 3 | 103 | 260 | 67 | 216 | 1.94e-12 | 67.4 |
| MS.gene46439.t1 | AT1G17640 | 27.848 | 158 | 106 | 3 | 103 | 260 | 67 | 216 | 1.94e-12 | 67.4 |
| MS.gene46439.t1 | AT5G06210 | 32.500 | 80 | 54 | 0 | 103 | 182 | 35 | 114 | 2.11e-12 | 64.3 |
| MS.gene46439.t1 | AT4G26650 | 26.540 | 211 | 133 | 7 | 92 | 283 | 1 | 208 | 2.97e-12 | 67.4 |
| MS.gene46439.t1 | AT4G26650 | 25.234 | 214 | 139 | 6 | 88 | 283 | 1 | 211 | 5.33e-12 | 66.6 |
| MS.gene46439.t1 | AT1G60900 | 24.402 | 209 | 134 | 5 | 92 | 278 | 246 | 452 | 5.98e-12 | 66.6 |
| MS.gene46439.t1 | AT3G26420 | 31.633 | 98 | 63 | 1 | 198 | 295 | 4 | 97 | 7.87e-12 | 64.7 |
| MS.gene46439.t1 | AT5G47320 | 38.889 | 90 | 53 | 1 | 202 | 291 | 32 | 119 | 9.30e-12 | 63.9 |
| MS.gene46439.t1 | AT4G39260 | 30.769 | 78 | 54 | 0 | 200 | 277 | 5 | 82 | 1.64e-11 | 61.2 |
| MS.gene46439.t1 | AT4G39260 | 31.169 | 77 | 53 | 0 | 201 | 277 | 6 | 82 | 1.66e-11 | 60.1 |
| MS.gene46439.t1 | AT4G36690 | 25.112 | 223 | 140 | 7 | 92 | 289 | 230 | 450 | 2.14e-11 | 64.7 |
| MS.gene46439.t1 | AT2G21660 | 31.250 | 80 | 55 | 0 | 198 | 277 | 5 | 84 | 3.00e-11 | 61.2 |
| MS.gene46439.t1 | AT4G39260 | 30.769 | 78 | 54 | 0 | 200 | 277 | 5 | 82 | 3.95e-11 | 61.2 |
| MS.gene46439.t1 | AT2G21660 | 31.250 | 80 | 55 | 0 | 198 | 277 | 5 | 84 | 4.11e-11 | 61.2 |
| MS.gene46439.t1 | AT4G36690 | 25.112 | 223 | 140 | 7 | 92 | 289 | 230 | 450 | 4.18e-11 | 63.9 |
| MS.gene46439.t1 | AT1G74230 | 33.333 | 99 | 65 | 1 | 80 | 178 | 12 | 109 | 7.69e-11 | 62.4 |
| MS.gene46439.t1 | AT4G36690 | 25.112 | 223 | 140 | 7 | 92 | 289 | 208 | 428 | 8.27e-11 | 63.2 |
| MS.gene46439.t1 | AT4G36690 | 25.112 | 223 | 140 | 7 | 92 | 289 | 230 | 450 | 8.44e-11 | 63.2 |
Find 91 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCTACTTTGGGCACTTC+TGG | 0.130934 | 1.2:-44475390 | None:intergenic |
| CCGACCTTTACGACTGAATT+TGG | 0.142633 | 1.2:+44475780 | MS.gene46439:CDS |
| GATAGCTTGGAAATGTTATT+TGG | 0.203210 | 1.2:+44475865 | MS.gene46439:CDS |
| AGTTGGAGGTAGGGTTATTA+AGG | 0.221845 | 1.2:+44475359 | MS.gene46439:CDS |
| CAGAGTATTGTTGTTCTTCA+TGG | 0.230069 | 1.2:-44473863 | None:intergenic |
| TCCCAATTGGCTCAACTCTT+TGG | 0.238814 | 1.2:+44474020 | MS.gene46439:CDS |
| AACGGAAAATCTCGCGGATA+TGG | 0.262481 | 1.2:+44475570 | MS.gene46439:CDS |
| CAACAAAGAGTCTCCTTGAT+TGG | 0.305570 | 1.2:-44473971 | None:intergenic |
| TTCATTATCTTCTTCCCAAT+TGG | 0.310967 | 1.2:+44474007 | MS.gene46439:CDS |
| TGTTCTGTGTGGGAAGTTAA+AGG | 0.331544 | 1.2:-44473757 | None:intergenic |
| TGGGAAGAAGATAATGAAAA+TGG | 0.335819 | 1.2:-44474002 | None:intergenic |
| TGCCTACTTTGGGCACTTCT+GGG | 0.350774 | 1.2:-44475389 | None:intergenic |
| AGGAAATAATGTTGATAGCT+TGG | 0.353289 | 1.2:+44475852 | MS.gene46439:CDS |
| GAATCAATTCGAATGTTTGA+TGG | 0.379569 | 1.2:+44474627 | MS.gene46439:CDS |
| TGAATTTGGCTGTGGATAAC+AGG | 0.383307 | 1.2:+44475794 | MS.gene46439:CDS |
| CTCCAAAGAGTTGAGCCAAT+TGG | 0.391995 | 1.2:-44474022 | None:intergenic |
| AACAAAGAGTCTCCTTGATT+GGG | 0.407980 | 1.2:-44473970 | None:intergenic |
| CAAAGGCTTCTCTAAGATCC+TGG | 0.418070 | 1.2:-44475500 | None:intergenic |
| GCTCAACTCTTTGGAGAGGC+TGG | 0.422749 | 1.2:+44474029 | MS.gene46439:CDS |
| TCCAAAGAGTTGAGCCAATT+GGG | 0.423377 | 1.2:-44474021 | None:intergenic |
| TCGGTAATTGATCAAAATAA+AGG | 0.427426 | 1.2:+44475832 | MS.gene46439:CDS |
| TGAAGAGGGTTGAATAATTG+AGG | 0.432626 | 1.2:-44473819 | None:intergenic |
| GTGTGGGAAGTTAAAGGAAA+TGG | 0.433410 | 1.2:-44473751 | None:intergenic |
| GAAGCCTTTGCTGAGCAATC+AGG | 0.442092 | 1.2:+44475513 | MS.gene46439:CDS |
| GTAGGCAAAAGGGTACAAAT+AGG | 0.445334 | 1.2:+44475405 | MS.gene46439:CDS |
| AAGTGCCCAAAGTAGGCAAA+AGG | 0.446953 | 1.2:+44475394 | MS.gene46439:CDS |
| AATCAGGCTTACTGAGTGCC+AGG | 0.450781 | 1.2:+44475529 | MS.gene46439:CDS |
| TAATTGAGGGATTAGATTGA+AGG | 0.454934 | 1.2:-44473805 | None:intergenic |
| AAGAGTCTGTGGTGGCAGAT+AGG | 0.457732 | 1.2:-44473702 | None:intergenic |
| GAAGAGGGTTGAATAATTGA+GGG | 0.476001 | 1.2:-44473818 | None:intergenic |
| CAAATAGGCTCAAACTATAG+AGG | 0.481475 | 1.2:+44475420 | MS.gene46439:CDS |
| CAATCAAGGAGACTCTTTGT+TGG | 0.482330 | 1.2:+44473972 | MS.gene46439:CDS |
| ACTGAACTCAGACCTAAAAC+AGG | 0.483263 | 1.2:+44473935 | MS.gene46439:CDS |
| CAGGAAGCCTTCATCTCCTT+CGG | 0.484942 | 1.2:+44475813 | MS.gene46439:CDS |
| AGAGTCTGTGGTGGCAGATA+GGG | 0.485185 | 1.2:-44473701 | None:intergenic |
| AAGATCTATGCTGGAAACCT+TGG | 0.486607 | 1.2:+44475462 | MS.gene46439:CDS |
| AATGGAGGAATGAGTAGTAA+AGG | 0.493216 | 1.2:-44473733 | None:intergenic |
| TTTACGACTGAATTTGGCTG+TGG | 0.511362 | 1.2:+44475786 | MS.gene46439:CDS |
| CTATGCTGGAAACCTTGGTT+GGG | 0.512049 | 1.2:+44475467 | MS.gene46439:CDS |
| AGGATTTGCGTTTGTTACAA+TGG | 0.514453 | 1.2:+44474584 | MS.gene46439:CDS |
| AGCCCTCACAAGATCTATGC+TGG | 0.520202 | 1.2:+44475453 | MS.gene46439:CDS |
| TCAATTACCGAAGGAGATGA+AGG | 0.522095 | 1.2:-44475820 | None:intergenic |
| TGTTACAATGGAGAGGGTGG+AGG | 0.525866 | 1.2:+44474596 | MS.gene46439:CDS |
| AATTGAGGGATTAGATTGAA+GGG | 0.529047 | 1.2:-44473804 | None:intergenic |
| AATGAAGGAGGTGGATGAAG+AGG | 0.529395 | 1.2:-44473834 | None:intergenic |
| TTATTTGGAATAAGCAAATG+AGG | 0.529682 | 1.2:+44475880 | MS.gene46439:CDS |
| AAGCAGAATCAACCCAATCA+AGG | 0.531753 | 1.2:+44473958 | MS.gene46439:CDS |
| TCTATGCTGGAAACCTTGGT+TGG | 0.532571 | 1.2:+44475466 | MS.gene46439:CDS |
| TGTACAGACAGTTGGAGGTA+GGG | 0.536228 | 1.2:+44475350 | MS.gene46439:intron |
| TGCGTTTGTTACAATGGAGA+GGG | 0.540835 | 1.2:+44474590 | MS.gene46439:CDS |
| TTGTACAGACAGTTGGAGGT+AGG | 0.542248 | 1.2:+44475349 | MS.gene46439:intron |
| ATGAAGGAGGTGGATGAAGA+GGG | 0.548537 | 1.2:-44473833 | None:intergenic |
| GGCTGGAAATGTTATATCTG+TGG | 0.549141 | 1.2:+44474046 | MS.gene46439:CDS |
| TCTTCATGGAATGAAAATGA+AGG | 0.550558 | 1.2:-44473849 | None:intergenic |
| TGTCTCTTTCGAAACTGCTG+AGG | 0.563295 | 1.2:+44475596 | MS.gene46439:CDS |
| CGAAACTGCTGAGGATGTAG+AGG | 0.566347 | 1.2:+44475605 | MS.gene46439:CDS |
| TTCCCAGAAGTGCCCAAAGT+AGG | 0.569809 | 1.2:+44475387 | MS.gene46439:CDS |
| TTGTTGTTGCTGTTCTGTGT+GGG | 0.570534 | 1.2:-44473767 | None:intergenic |
| ACAGCCAAATTCAGTCGTAA+AGG | 0.572484 | 1.2:-44475784 | None:intergenic |
| AGTGCCCAAAGTAGGCAAAA+GGG | 0.576216 | 1.2:+44475395 | MS.gene46439:CDS |
| AAAGGCTTCTCTAAGATCCT+GGG | 0.581121 | 1.2:-44475499 | None:intergenic |
| TGGAATGAAAATGAAGGAGG+TGG | 0.583543 | 1.2:-44473843 | None:intergenic |
| TGGTTGGGATATGACTTCCC+AGG | 0.584520 | 1.2:+44475482 | MS.gene46439:CDS |
| GTTGTTGTTGCTGTTCTGTG+TGG | 0.585304 | 1.2:-44473768 | None:intergenic |
| GATGTTGTACAGACAGTTGG+AGG | 0.588100 | 1.2:+44475345 | MS.gene46439:intron |
| ACCAGTGGTTGCACTAGCCA+TGG | 0.590130 | 1.2:-44473673 | None:intergenic |
| TTGCGTTTGTTACAATGGAG+AGG | 0.591751 | 1.2:+44474589 | MS.gene46439:CDS |
| GTTCCTTTCGTAGACGACCC+TGG | 0.594290 | 1.2:-44475547 | None:intergenic |
| TGGGAAGTTAAAGGAAATGG+AGG | 0.597587 | 1.2:-44473748 | None:intergenic |
| TTTCCAGCATAGATCTTGTG+AGG | 0.601847 | 1.2:-44475456 | None:intergenic |
| GACATCACAAATAGAAGCAG+AGG | 0.606453 | 1.2:+44474564 | MS.gene46439:CDS |
| TGGAAATGTTATATCTGTGG+AGG | 0.608462 | 1.2:+44474049 | MS.gene46439:CDS |
| ATTGGCTCAACTCTTTGGAG+AGG | 0.610646 | 1.2:+44474025 | MS.gene46439:CDS |
| AGGAAAAGTTGAAGAGTCTG+TGG | 0.620276 | 1.2:-44473713 | None:intergenic |
| ACCATGGCTAGTGCAACCAC+TGG | 0.624472 | 1.2:+44473672 | None:intergenic |
| TAAGCCTGATTGCTCAGCAA+AGG | 0.625819 | 1.2:-44475517 | None:intergenic |
| TTCCAGCATAGATCTTGTGA+GGG | 0.627663 | 1.2:-44475455 | None:intergenic |
| GTGCCAGGGTCGTCTACGAA+AGG | 0.628572 | 1.2:+44475544 | MS.gene46439:CDS |
| CCAAATTCAGTCGTAAAGGT+CGG | 0.632704 | 1.2:-44475780 | None:intergenic |
| TATGATGTTGTACAGACAGT+TGG | 0.641337 | 1.2:+44475342 | MS.gene46439:intron |
| GTTTGTTACAATGGAGAGGG+TGG | 0.643170 | 1.2:+44474593 | MS.gene46439:CDS |
| ATCAGGCTTACTGAGTGCCA+GGG | 0.645982 | 1.2:+44475530 | MS.gene46439:CDS |
| TCATGGAATGAAAATGAAGG+AGG | 0.651139 | 1.2:-44473846 | None:intergenic |
| GTTGCTTTGAGTGCTATGAA+CGG | 0.670859 | 1.2:+44475627 | MS.gene46439:CDS |
| AAAAGTTGAAGAGTCTGTGG+TGG | 0.674091 | 1.2:-44473710 | None:intergenic |
| GCAGATAGGGAAGGAACCAG+TGG | 0.674251 | 1.2:-44473688 | None:intergenic |
| GTCGTCTACGAAAGGAACAA+CGG | 0.675544 | 1.2:+44475552 | MS.gene46439:CDS |
| GGGAAGTCATATCCCAACCA+AGG | 0.679543 | 1.2:-44475479 | None:intergenic |
| AGGAACAACGGAAAATCTCG+CGG | 0.706699 | 1.2:+44475564 | MS.gene46439:CDS |
| TCTGTGGTGGCAGATAGGGA+AGG | 0.718022 | 1.2:-44473697 | None:intergenic |
| TTTGAGTGCTATGAACGGCG+TGG | 0.729342 | 1.2:+44475632 | MS.gene46439:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAAATAATTAATAAACC+AGG | - | chr1.2:44474798-44474817 | None:intergenic | 15.0% |
| !! | TAAGTCAAATAAAACAAAAT+TGG | - | chr1.2:44474525-44474544 | None:intergenic | 15.0% |
| !!! | ATTAAAATTTTGCAATTTGA+GGG | - | chr1.2:44474184-44474203 | None:intergenic | 15.0% |
| !!! | ATTTAAGATATTTTTGGTTT+TGG | + | chr1.2:44474475-44474494 | MS.gene46439:intron | 15.0% |
| !!! | TGTTGATTACATTTTAAATA+TGG | + | chr1.2:44474666-44474685 | MS.gene46439:intron | 15.0% |
| !!! | TTTAAGATATTTTTGGTTTT+GGG | + | chr1.2:44474476-44474495 | MS.gene46439:intron | 15.0% |
| !! | AAAATTTGCACAACTAATAA+TGG | - | chr1.2:44475678-44475697 | None:intergenic | 20.0% |
| !! | ACTTATTAAAACTTATCAAC+TGG | - | chr1.2:44475162-44475181 | None:intergenic | 20.0% |
| !! | ATGATAAAAACTGAAAAGAA+TGG | - | chr1.2:44474082-44474101 | None:intergenic | 20.0% |
| !! | CTTAAATCAAGAAAAGATAT+AGG | - | chr1.2:44475220-44475239 | None:intergenic | 20.0% |
| !! | TATTCTATTATAGATGAAGA+TGG | + | chr1.2:44474875-44474894 | MS.gene46439:intron | 20.0% |
| !! | TCTTAGATTAGTATATAGTA+TGG | + | chr1.2:44474839-44474858 | MS.gene46439:intron | 20.0% |
| !!! | AATAAGTTGAAATCATCTTA+TGG | + | chr1.2:44475128-44475147 | MS.gene46439:intron | 20.0% |
| !!! | ATTTTCGAATATTGATATGT+GGG | + | chr1.2:44474393-44474412 | MS.gene46439:intron | 20.0% |
| !!! | GATTAAAATTTTGCAATTTG+AGG | - | chr1.2:44474185-44474204 | None:intergenic | 20.0% |
| !!! | TATCATTTTGGGTATAAATT+AGG | + | chr1.2:44474981-44475000 | MS.gene46439:intron | 20.0% |
| !!! | TATTTTCGAATATTGATATG+TGG | + | chr1.2:44474392-44474411 | MS.gene46439:intron | 20.0% |
| !!! | TCTTGTCTTATTATCATTTT+GGG | + | chr1.2:44474970-44474989 | MS.gene46439:intron | 20.0% |
| !!! | TTCTTGTCTTATTATCATTT+TGG | + | chr1.2:44474969-44474988 | MS.gene46439:intron | 20.0% |
| ! | AAACAGACCAATAAATCATT+TGG | + | chr1.2:44475188-44475207 | MS.gene46439:intron | 25.0% |
| ! | AACAGACCAATAAATCATTT+GGG | + | chr1.2:44475189-44475208 | MS.gene46439:intron | 25.0% |
| ! | AATAAGCTATTTATCCAAAC+AGG | - | chr1.2:44475008-44475027 | None:intergenic | 25.0% |
| ! | ACATTTAGACCATAATGATT+TGG | + | chr1.2:44474898-44474917 | MS.gene46439:intron | 25.0% |
| ! | ATAAGCTATTTATCCAAACA+GGG | - | chr1.2:44475007-44475026 | None:intergenic | 25.0% |
| ! | CATTGTTTGTTTCATATATG+AGG | + | chr1.2:44474099-44474118 | MS.gene46439:intron | 25.0% |
| ! | GCTTAGTTGAAAATTAGTTA+GGG | + | chr1.2:44474933-44474952 | MS.gene46439:intron | 25.0% |
| ! | TAAAAACTGAAAAGAATGGA+AGG | - | chr1.2:44474078-44474097 | None:intergenic | 25.0% |
| ! | TAGAGTTGCAATTTACAATT+TGG | - | chr1.2:44475271-44475290 | None:intergenic | 25.0% |
| ! | TCGGTAATTGATCAAAATAA+AGG | + | chr1.2:44475832-44475851 | MS.gene46439:CDS | 25.0% |
| !! | CATTTTTATCAACATTGACA+TGG | + | chr1.2:44474309-44474328 | MS.gene46439:intron | 25.0% |
| !! | TCAATTTAGTTGATACTTGT+AGG | + | chr1.2:44474203-44474222 | MS.gene46439:intron | 25.0% |
| !!! | TGTATAATGTACTGTTTTTC+AGG | + | chr1.2:44475747-44475766 | MS.gene46439:intron | 25.0% |
| !!! | TTATTTTGATCAATTACCGA+AGG | - | chr1.2:44475832-44475851 | None:intergenic | 25.0% |
| AAGACAAGAAAACAAGATAC+TGG | - | chr1.2:44474959-44474978 | None:intergenic | 30.0% | |
| AAGTTTGTCCTTGAAATTGT+AGG | - | chr1.2:44474436-44474455 | None:intergenic | 30.0% | |
| AATTGAGGGATTAGATTGAA+GGG | - | chr1.2:44473807-44473826 | None:intergenic | 30.0% | |
| AGTTTGTCCTTGAAATTGTA+GGG | - | chr1.2:44474435-44474454 | None:intergenic | 30.0% | |
| GAATCAATTCGAATGTTTGA+TGG | + | chr1.2:44474627-44474646 | MS.gene46439:CDS | 30.0% | |
| GAGTTCAATTCTAATGGTAA+TGG | + | chr1.2:44475318-44475337 | MS.gene46439:intron | 30.0% | |
| GATAAAACCCTACAATTTCA+AGG | + | chr1.2:44474425-44474444 | MS.gene46439:intron | 30.0% | |
| GATAGCTTGGAAATGTTATT+TGG | + | chr1.2:44475865-44475884 | MS.gene46439:CDS | 30.0% | |
| GATTAAGCACCAAATCATTA+TGG | - | chr1.2:44474910-44474929 | None:intergenic | 30.0% | |
| GGCTTAGTTGAAAATTAGTT+AGG | + | chr1.2:44474932-44474951 | MS.gene46439:intron | 30.0% | |
| GTATCTCCCAAATGATTTAT+TGG | - | chr1.2:44475198-44475217 | None:intergenic | 30.0% | |
| TAATTGAGGGATTAGATTGA+AGG | - | chr1.2:44473808-44473827 | None:intergenic | 30.0% | |
| TCTTCATGGAATGAAAATGA+AGG | - | chr1.2:44473852-44473871 | None:intergenic | 30.0% | |
| TGGGAAGAAGATAATGAAAA+TGG | - | chr1.2:44474005-44474024 | None:intergenic | 30.0% | |
| TTCATTATCTTCTTCCCAAT+TGG | + | chr1.2:44474007-44474026 | MS.gene46439:CDS | 30.0% | |
| ! | TTAGTTGATACTTGTAGGAT+TGG | + | chr1.2:44474208-44474227 | MS.gene46439:intron | 30.0% |
| ! | TTTAGTTCCTCATTCCAAAA+TGG | + | chr1.2:44474157-44474176 | MS.gene46439:intron | 30.0% |
| !! | AATGATTTGGTGCTTAATCA+AGG | + | chr1.2:44474911-44474930 | MS.gene46439:intron | 30.0% |
| !! | AGGAAATAATGTTGATAGCT+TGG | + | chr1.2:44475852-44475871 | MS.gene46439:CDS | 30.0% |
| !! | ATCTTATTCAACTAGCTTTC+TGG | + | chr1.2:44475244-44475263 | MS.gene46439:intron | 30.0% |
| !! | ATTGAAGGGTTTTGTAGAAA+TGG | - | chr1.2:44473793-44473812 | None:intergenic | 30.0% |
| !!! | ATAATGTACTGTTTTTCAGG+AGG | + | chr1.2:44475750-44475769 | MS.gene46439:intron | 30.0% |
| AACAAAGAGTCTCCTTGATT+GGG | - | chr1.2:44473973-44473992 | None:intergenic | 35.0% | |
| AATATTGATATGTGGGCTCT+AGG | + | chr1.2:44474400-44474419 | MS.gene46439:intron | 35.0% | |
| AATGGAGGAATGAGTAGTAA+AGG | - | chr1.2:44473736-44473755 | None:intergenic | 35.0% | |
| CAAATAGGCTCAAACTATAG+AGG | + | chr1.2:44475420-44475439 | MS.gene46439:CDS | 35.0% | |
| CTAGCAGAGTTCAATTCTAA+TGG | + | chr1.2:44475312-44475331 | MS.gene46439:intron | 35.0% | |
| GAAGAGGGTTGAATAATTGA+GGG | - | chr1.2:44473821-44473840 | None:intergenic | 35.0% | |
| GATAGTGCAGGTTGTTTATA+AGG | - | chr1.2:44474768-44474787 | None:intergenic | 35.0% | |
| TATGATGTTGTACAGACAGT+TGG | + | chr1.2:44475342-44475361 | MS.gene46439:intron | 35.0% | |
| TCATGGAATGAAAATGAAGG+AGG | - | chr1.2:44473849-44473868 | None:intergenic | 35.0% | |
| TGAAGAGGGTTGAATAATTG+AGG | - | chr1.2:44473822-44473841 | None:intergenic | 35.0% | |
| TGGAAATGTTATATCTGTGG+AGG | + | chr1.2:44474049-44474068 | MS.gene46439:CDS | 35.0% | |
| ! | AGGATTTGCGTTTGTTACAA+TGG | + | chr1.2:44474584-44474603 | MS.gene46439:CDS | 35.0% |
| ! | TCAAGGACAAACTTGAGTTT+TGG | + | chr1.2:44474442-44474461 | MS.gene46439:intron | 35.0% |
| ! | TTGATTCTGCTTCCTGTTTT+AGG | - | chr1.2:44473950-44473969 | None:intergenic | 35.0% |
| !! | CAGAGTATTGTTGTTCTTCA+TGG | - | chr1.2:44473866-44473885 | None:intergenic | 35.0% |
| !! | TTTTAGGTCTGAGTTCAGTA+AGG | - | chr1.2:44473934-44473953 | None:intergenic | 35.0% |
| AAAAGTTGAAGAGTCTGTGG+TGG | - | chr1.2:44473713-44473732 | None:intergenic | 40.0% | |
| AAAGTGTGCCAAAATCATGG+TGG | + | chr1.2:44474713-44474732 | MS.gene46439:intron | 40.0% | |
| AAGATCTATGCTGGAAACCT+TGG | + | chr1.2:44475462-44475481 | MS.gene46439:CDS | 40.0% | |
| AAGCAGAATCAACCCAATCA+AGG | + | chr1.2:44473958-44473977 | MS.gene46439:CDS | 40.0% | |
| ACAGCCAAATTCAGTCGTAA+AGG | - | chr1.2:44475787-44475806 | None:intergenic | 40.0% | |
| ACTGAACTCAGACCTAAAAC+AGG | + | chr1.2:44473935-44473954 | MS.gene46439:CDS | 40.0% | |
| AGGAAAAGTTGAAGAGTCTG+TGG | - | chr1.2:44473716-44473735 | None:intergenic | 40.0% | |
| AGTGCAGGTTGTTTATAAGG+AGG | - | chr1.2:44474765-44474784 | None:intergenic | 40.0% | |
| AGTTGGAGGTAGGGTTATTA+AGG | + | chr1.2:44475359-44475378 | MS.gene46439:CDS | 40.0% | |
| ATCGACATAGACATCAGACA+TGG | - | chr1.2:44474358-44474377 | None:intergenic | 40.0% | |
| CAACAAAGAGTCTCCTTGAT+TGG | - | chr1.2:44473974-44473993 | None:intergenic | 40.0% | |
| CAATCAAGGAGACTCTTTGT+TGG | + | chr1.2:44473972-44473991 | MS.gene46439:CDS | 40.0% | |
| CCAAATTCAGTCGTAAAGGT+CGG | - | chr1.2:44475783-44475802 | None:intergenic | 40.0% | |
| GACATCACAAATAGAAGCAG+AGG | + | chr1.2:44474564-44474583 | MS.gene46439:CDS | 40.0% | |
| GGCTGGAAATGTTATATCTG+TGG | + | chr1.2:44474046-44474065 | MS.gene46439:CDS | 40.0% | |
| GGTATAAATTAGGCCCTGTT+TGG | + | chr1.2:44474991-44475010 | MS.gene46439:intron | 40.0% | |
| GTGCAGGTTGTTTATAAGGA+GGG | - | chr1.2:44474764-44474783 | None:intergenic | 40.0% | |
| GTGTGGGAAGTTAAAGGAAA+TGG | - | chr1.2:44473754-44473773 | None:intergenic | 40.0% | |
| TCAATTACCGAAGGAGATGA+AGG | - | chr1.2:44475823-44475842 | None:intergenic | 40.0% | |
| TCCAAAGAGTTGAGCCAATT+GGG | - | chr1.2:44474024-44474043 | None:intergenic | 40.0% | |
| TGAATTTGGCTGTGGATAAC+AGG | + | chr1.2:44475794-44475813 | MS.gene46439:CDS | 40.0% | |
| TGCAAAGTGTGCCAAAATCA+TGG | + | chr1.2:44474710-44474729 | MS.gene46439:intron | 40.0% | |
| TGGAATGAAAATGAAGGAGG+TGG | - | chr1.2:44473846-44473865 | None:intergenic | 40.0% | |
| TGGGAAGTTAAAGGAAATGG+AGG | - | chr1.2:44473751-44473770 | None:intergenic | 40.0% | |
| TGTTCTGTGTGGGAAGTTAA+AGG | - | chr1.2:44473760-44473779 | None:intergenic | 40.0% | |
| TTCCAGCATAGATCTTGTGA+GGG | - | chr1.2:44475458-44475477 | None:intergenic | 40.0% | |
| TTTACGACTGAATTTGGCTG+TGG | + | chr1.2:44475786-44475805 | MS.gene46439:CDS | 40.0% | |
| TTTCCAGCATAGATCTTGTG+AGG | - | chr1.2:44475459-44475478 | None:intergenic | 40.0% | |
| ! | CAAGACTACCACCATGATTT+TGG | - | chr1.2:44474724-44474743 | None:intergenic | 40.0% |
| ! | GTAGGCAAAAGGGTACAAAT+AGG | + | chr1.2:44475405-44475424 | MS.gene46439:CDS | 40.0% |
| ! | GTTGCTTTGAGTGCTATGAA+CGG | + | chr1.2:44475627-44475646 | MS.gene46439:CDS | 40.0% |
| ! | TGCAATTTGAGGGACCATTT+TGG | - | chr1.2:44474174-44474193 | None:intergenic | 40.0% |
| ! | TGCGTTTGTTACAATGGAGA+GGG | + | chr1.2:44474590-44474609 | MS.gene46439:CDS | 40.0% |
| ! | TGTACCCTTTTGCCTACTTT+GGG | - | chr1.2:44475402-44475421 | None:intergenic | 40.0% |
| ! | TTGCGTTTGTTACAATGGAG+AGG | + | chr1.2:44474589-44474608 | MS.gene46439:CDS | 40.0% |
| ! | TTGTACCCTTTTGCCTACTT+TGG | - | chr1.2:44475403-44475422 | None:intergenic | 40.0% |
| ! | TTGTTGTTGCTGTTCTGTGT+GGG | - | chr1.2:44473770-44473789 | None:intergenic | 40.0% |
| !! | AAAGGCTTCTCTAAGATCCT+GGG | - | chr1.2:44475502-44475521 | None:intergenic | 40.0% |
| !!! | ACTGTTTTTCAGGAGGTTCA+AGG | + | chr1.2:44475757-44475776 | MS.gene46439:intron | 40.0% |
| AACGGAAAATCTCGCGGATA+TGG | + | chr1.2:44475570-44475589 | MS.gene46439:CDS | 45.0% | |
| AAGTGCCCAAAGTAGGCAAA+AGG | + | chr1.2:44475394-44475413 | MS.gene46439:CDS | 45.0% | |
| AATGAAGGAGGTGGATGAAG+AGG | - | chr1.2:44473837-44473856 | None:intergenic | 45.0% | |
| AGGAACAACGGAAAATCTCG+CGG | + | chr1.2:44475564-44475583 | MS.gene46439:CDS | 45.0% | |
| AGTGCCCAAAGTAGGCAAAA+GGG | + | chr1.2:44475395-44475414 | MS.gene46439:CDS | 45.0% | |
| ATGAAGGAGGTGGATGAAGA+GGG | - | chr1.2:44473836-44473855 | None:intergenic | 45.0% | |
| CCGACCTTTACGACTGAATT+TGG | + | chr1.2:44475780-44475799 | MS.gene46439:CDS | 45.0% | |
| CTATGCTGGAAACCTTGGTT+GGG | + | chr1.2:44475467-44475486 | MS.gene46439:CDS | 45.0% | |
| CTCCAAAGAGTTGAGCCAAT+TGG | - | chr1.2:44474025-44474044 | None:intergenic | 45.0% | |
| GATGTTGTACAGACAGTTGG+AGG | + | chr1.2:44475345-44475364 | MS.gene46439:intron | 45.0% | |
| GTCGTCTACGAAAGGAACAA+CGG | + | chr1.2:44475552-44475571 | MS.gene46439:CDS | 45.0% | |
| TAAGCCTGATTGCTCAGCAA+AGG | - | chr1.2:44475520-44475539 | None:intergenic | 45.0% | |
| TCTATGCTGGAAACCTTGGT+TGG | + | chr1.2:44475466-44475485 | MS.gene46439:CDS | 45.0% | |
| TGTACAGACAGTTGGAGGTA+GGG | + | chr1.2:44475350-44475369 | MS.gene46439:intron | 45.0% | |
| TGTCTCTTTCGAAACTGCTG+AGG | + | chr1.2:44475596-44475615 | MS.gene46439:CDS | 45.0% | |
| TTGTACAGACAGTTGGAGGT+AGG | + | chr1.2:44475349-44475368 | MS.gene46439:intron | 45.0% | |
| ! | ATTGGCTCAACTCTTTGGAG+AGG | + | chr1.2:44474025-44474044 | MS.gene46439:CDS | 45.0% |
| ! | GTTGTTGTTGCTGTTCTGTG+TGG | - | chr1.2:44473771-44473790 | None:intergenic | 45.0% |
| ! | GTTTGTTACAATGGAGAGGG+TGG | + | chr1.2:44474593-44474612 | MS.gene46439:CDS | 45.0% |
| ! | TCCCAATTGGCTCAACTCTT+TGG | + | chr1.2:44474020-44474039 | MS.gene46439:CDS | 45.0% |
| !! | CAAAGGCTTCTCTAAGATCC+TGG | - | chr1.2:44475503-44475522 | None:intergenic | 45.0% |
| !!! | TGAGGGACCATTTTGGAATG+AGG | - | chr1.2:44474167-44474186 | None:intergenic | 45.0% |
| !!! | TAATAAATTTAAGATATTTT+TGG | + | chr1.2:44474469-44474488 | MS.gene46439:intron | 5.0% |
| AAGAGTCTGTGGTGGCAGAT+AGG | - | chr1.2:44473705-44473724 | None:intergenic | 50.0% | |
| AATCAGGCTTACTGAGTGCC+AGG | + | chr1.2:44475529-44475548 | MS.gene46439:CDS | 50.0% | |
| AGAGTCTGTGGTGGCAGATA+GGG | - | chr1.2:44473704-44473723 | None:intergenic | 50.0% | |
| AGCCCTCACAAGATCTATGC+TGG | + | chr1.2:44475453-44475472 | MS.gene46439:CDS | 50.0% | |
| ATCAGGCTTACTGAGTGCCA+GGG | + | chr1.2:44475530-44475549 | MS.gene46439:CDS | 50.0% | |
| CAGGAAGCCTTCATCTCCTT+CGG | + | chr1.2:44475813-44475832 | MS.gene46439:CDS | 50.0% | |
| CCTGCACTATCACTTGAACC+TGG | + | chr1.2:44474777-44474796 | MS.gene46439:intron | 50.0% | |
| CGAAACTGCTGAGGATGTAG+AGG | + | chr1.2:44475605-44475624 | MS.gene46439:CDS | 50.0% | |
| GAAGCCTTTGCTGAGCAATC+AGG | + | chr1.2:44475513-44475532 | MS.gene46439:CDS | 50.0% | |
| GGGAAGTCATATCCCAACCA+AGG | - | chr1.2:44475482-44475501 | None:intergenic | 50.0% | |
| TGCCTACTTTGGGCACTTCT+GGG | - | chr1.2:44475392-44475411 | None:intergenic | 50.0% | |
| TGGTTGGGATATGACTTCCC+AGG | + | chr1.2:44475482-44475501 | MS.gene46439:CDS | 50.0% | |
| TGTTACAATGGAGAGGGTGG+AGG | + | chr1.2:44474596-44474615 | MS.gene46439:CDS | 50.0% | |
| TTGCCTACTTTGGGCACTTC+TGG | - | chr1.2:44475393-44475412 | None:intergenic | 50.0% | |
| TTTGAGTGCTATGAACGGCG+TGG | + | chr1.2:44475632-44475651 | MS.gene46439:CDS | 50.0% | |
| ! | CCAGGTTCAAGTGATAGTGC+AGG | - | chr1.2:44474780-44474799 | None:intergenic | 50.0% |
| ! | GTTTATAAGGAGGGTGCAGC+AGG | - | chr1.2:44474755-44474774 | None:intergenic | 50.0% |
| !! | TGGCGTTGACGTGTTATGTC+AGG | + | chr1.2:44474329-44474348 | MS.gene46439:intron | 50.0% |
| !! | TTCCCAGAAGTGCCCAAAGT+AGG | + | chr1.2:44475387-44475406 | MS.gene46439:CDS | 50.0% |
| GCAGATAGGGAAGGAACCAG+TGG | - | chr1.2:44473691-44473710 | None:intergenic | 55.0% | |
| GTTCCTTTCGTAGACGACCC+TGG | - | chr1.2:44475550-44475569 | None:intergenic | 55.0% | |
| TCTGTGGTGGCAGATAGGGA+AGG | - | chr1.2:44473700-44473719 | None:intergenic | 55.0% | |
| ! | GCTCAACTCTTTGGAGAGGC+TGG | + | chr1.2:44474029-44474048 | MS.gene46439:CDS | 55.0% |
| GTGCCAGGGTCGTCTACGAA+AGG | + | chr1.2:44475544-44475563 | MS.gene46439:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 44473675 | 44475900 | 44473675 | ID=MS.gene46439 |
| chr1.2 | mRNA | 44473675 | 44475900 | 44473675 | ID=MS.gene46439.t1;Parent=MS.gene46439 |
| chr1.2 | exon | 44473675 | 44474070 | 44473675 | ID=MS.gene46439.t1.exon1;Parent=MS.gene46439.t1 |
| chr1.2 | CDS | 44473675 | 44474070 | 44473675 | ID=cds.MS.gene46439.t1;Parent=MS.gene46439.t1 |
| chr1.2 | exon | 44474552 | 44474653 | 44474552 | ID=MS.gene46439.t1.exon2;Parent=MS.gene46439.t1 |
| chr1.2 | CDS | 44474552 | 44474653 | 44474552 | ID=cds.MS.gene46439.t1;Parent=MS.gene46439.t1 |
| chr1.2 | exon | 44475357 | 44475653 | 44475357 | ID=MS.gene46439.t1.exon3;Parent=MS.gene46439.t1 |
| chr1.2 | CDS | 44475357 | 44475653 | 44475357 | ID=cds.MS.gene46439.t1;Parent=MS.gene46439.t1 |
| chr1.2 | exon | 44475769 | 44475900 | 44475769 | ID=MS.gene46439.t1.exon4;Parent=MS.gene46439.t1 |
| chr1.2 | CDS | 44475769 | 44475900 | 44475769 | ID=cds.MS.gene46439.t1;Parent=MS.gene46439.t1 |
| Gene Sequence |
| Protein sequence |
