AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54146

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54146.t1 MTR_2g069030 97.452 314 8 0 33 346 11 324 0.0 635
MS.gene54146.t1 MTR_2g069010 93.491 169 11 0 348 516 13 181 1.28e-111 337
MS.gene54146.t1 MTR_2g069020 88.757 169 19 0 348 516 11 179 1.47e-106 323
MS.gene54146.t1 MTR_2g069020 88.757 169 19 0 348 516 11 179 8.47e-106 322
MS.gene54146.t1 MTR_2g068950 84.000 175 28 0 342 516 1 175 5.20e-103 314
MS.gene54146.t1 MTR_2g068960 81.714 175 32 0 342 516 1 175 9.22e-101 308
MS.gene54146.t1 MTR_2g069060 66.471 170 37 1 352 521 17 166 8.37e-72 233
MS.gene54146.t1 MTR_2g069070 66.467 167 36 1 352 518 17 163 3.16e-71 226
MS.gene54146.t1 MTR_2g069060 72.028 143 40 0 379 521 2 144 1.40e-69 224
MS.gene54146.t1 MTR_7g056347 57.647 170 70 1 352 521 17 184 3.00e-64 214
MS.gene54146.t1 MTR_1g093120 53.846 182 82 1 342 521 3 184 3.06e-63 211
MS.gene54146.t1 MTR_4g024660 56.471 170 72 1 352 521 17 184 1.18e-62 209
MS.gene54146.t1 MTR_8g062600 57.059 170 71 1 352 521 17 184 1.29e-62 209
MS.gene54146.t1 MTR_8g006930 53.371 178 81 1 344 521 9 184 1.74e-61 206
MS.gene54146.t1 MTR_7g078010 55.882 170 73 1 352 521 17 184 3.21e-61 203
MS.gene54146.t1 MTR_1g093110 53.333 180 80 2 346 521 8 187 8.87e-61 204
MS.gene54146.t1 MTR_7g078010 55.882 170 73 1 352 521 17 184 2.72e-60 203
MS.gene54146.t1 MTR_4g119410 52.809 178 82 1 344 521 9 184 3.21e-60 203
MS.gene54146.t1 MTR_1g093140 53.672 177 75 2 352 521 14 190 3.22e-59 201
MS.gene54146.t1 MTR_7g056393 55.172 174 76 1 344 517 9 180 1.15e-58 199
MS.gene54146.t1 MTR_8g063070 54.118 170 76 1 352 521 17 184 1.56e-58 199
MS.gene54146.t1 MTR_8g469400 55.030 169 62 2 352 520 17 171 4.00e-55 189
MS.gene54146.t1 MTR_8g009080 51.765 170 81 1 352 521 43 211 1.25e-51 179
MS.gene54146.t1 MTR_8g009080 51.765 170 81 1 352 521 43 211 2.31e-51 179
MS.gene54146.t1 MTR_8g009080 51.765 170 81 1 352 521 43 211 7.01e-51 179
MS.gene54146.t1 MTR_7g056370 51.250 160 76 1 362 521 6 163 1.62e-50 172
MS.gene54146.t1 MTR_4g099380 48.171 164 80 1 354 517 124 282 1.15e-49 172
MS.gene54146.t1 MTR_2g069210 47.929 169 87 1 353 521 14 181 1.18e-49 175
MS.gene54146.t1 MTR_8g041600 45.455 176 93 2 344 517 9 183 1.88e-48 170
MS.gene54146.t1 MTR_8g041600 44.444 180 97 2 344 521 9 187 1.25e-47 170
MS.gene54146.t1 MTR_2g069190 46.746 169 89 1 353 521 18 185 3.73e-47 168
MS.gene54146.t1 MTR_2g069090 46.154 169 90 1 353 521 18 185 5.53e-47 168
MS.gene54146.t1 MTR_8g041620 46.591 176 91 2 344 517 9 183 1.20e-46 167
MS.gene54146.t1 MTR_1g043810 47.647 170 85 3 353 521 5 171 1.04e-44 160
MS.gene54146.t1 MTR_1g043810 47.647 170 85 3 353 521 5 171 2.40e-44 160
MS.gene54146.t1 MTR_1g043760 45.562 169 89 2 353 521 5 170 3.53e-44 160
MS.gene54146.t1 MTR_1g043770 44.970 169 89 2 353 521 5 169 3.74e-44 158
MS.gene54146.t1 MTR_1g043775 45.882 170 88 3 353 521 5 171 6.82e-44 157
MS.gene54146.t1 MTR_1g043770 44.970 169 89 2 353 521 5 169 7.35e-44 159
MS.gene54146.t1 MTR_1g043775 45.882 170 88 3 353 521 5 171 2.25e-43 157
MS.gene54146.t1 MTR_2g069300 43.636 165 92 1 353 517 4 167 5.56e-43 157
MS.gene54146.t1 MTR_8g028435 44.311 167 88 3 356 521 16 178 2.47e-42 155
MS.gene54146.t1 MTR_8g009090 44.910 167 87 3 356 521 16 178 9.38e-42 153
MS.gene54146.t1 MTR_0032s0040 42.135 178 92 4 348 517 8 182 1.28e-41 153
MS.gene54146.t1 MTR_1g044105 43.452 168 90 3 353 516 5 171 1.43e-41 147
MS.gene54146.t1 MTR_7g029655 43.787 169 89 2 352 517 12 177 2.68e-41 152
MS.gene54146.t1 MTR_8g008930 45.238 168 86 4 356 521 16 179 3.94e-41 152
MS.gene54146.t1 MTR_8g009160 41.317 167 93 2 356 521 16 178 3.12e-40 149
MS.gene54146.t1 MTR_8g009150 40.476 168 94 3 356 521 16 179 1.02e-39 147
MS.gene54146.t1 MTR_1g070185 43.860 171 91 3 352 521 18 184 1.64e-39 147
MS.gene54146.t1 MTR_8g009110 42.262 168 91 3 356 521 16 179 4.84e-39 146
MS.gene54146.t1 MTR_8g009120 41.104 163 90 3 356 516 16 174 2.13e-38 144
MS.gene54146.t1 MTR_4g117880 41.667 168 92 4 356 521 16 179 3.13e-37 141
MS.gene54146.t1 MTR_7g105070 38.824 170 102 2 352 521 8 175 4.77e-37 140
MS.gene54146.t1 MTR_8g009170 41.667 168 92 4 356 521 16 179 3.66e-36 136
MS.gene54146.t1 MTR_8g009170 41.667 168 92 4 356 521 16 179 1.04e-35 137
MS.gene54146.t1 MTR_2g069130 69.474 95 23 2 408 500 12 102 9.33e-35 127
MS.gene54146.t1 MTR_7g056353 41.420 169 69 3 352 520 19 157 3.62e-34 135
MS.gene54146.t1 MTR_1g032250 37.952 166 100 1 352 517 21 183 1.03e-33 131
MS.gene54146.t1 MTR_1g032220 37.952 166 100 1 352 517 21 183 6.02e-33 129
MS.gene54146.t1 MTR_1g032140 36.145 166 103 1 352 517 14 176 3.59e-32 127
MS.gene54146.t1 MTR_4g109680 29.032 341 214 12 34 361 16 341 1.29e-28 120
MS.gene54146.t1 MTR_1g084120 25.352 355 225 11 43 382 28 357 1.07e-21 99.4
MS.gene54146.t1 MTR_1g084120 32.065 184 117 5 37 216 122 301 4.70e-17 84.7
MS.gene54146.t1 MTR_1g084120 28.139 231 148 6 82 307 15 232 5.09e-17 84.7
MS.gene54146.t1 MTR_1g084120 27.273 154 104 4 36 188 175 321 8.32e-11 65.1
MS.gene54146.t1 MTR_4g132120 28.163 245 164 4 53 294 292 527 3.78e-19 91.7
MS.gene54146.t1 MTR_4g119100 27.273 242 147 9 46 269 157 387 2.17e-18 89.0
MS.gene54146.t1 MTR_4g119100 25.103 243 155 8 81 310 82 310 1.09e-14 77.4
MS.gene54146.t1 MTR_4g119100 24.569 232 160 6 43 262 96 324 1.28e-14 77.4
MS.gene54146.t1 MTR_4g119100 27.273 242 147 9 46 269 158 388 2.66e-18 89.0
MS.gene54146.t1 MTR_4g119100 25.103 243 155 8 81 310 83 311 1.54e-14 77.0
MS.gene54146.t1 MTR_4g119100 24.569 232 160 6 43 262 97 325 1.97e-14 76.6
MS.gene54146.t1 MTR_4g119100 27.273 242 147 9 46 269 158 388 2.69e-18 89.0
MS.gene54146.t1 MTR_4g119100 25.103 243 155 8 81 310 83 311 1.26e-14 77.4
MS.gene54146.t1 MTR_4g119100 24.569 232 160 6 43 262 97 325 1.82e-14 76.6
MS.gene54146.t1 MTR_1g107265 28.014 282 171 10 43 295 69 347 1.74e-16 83.2
MS.gene54146.t1 MTR_2g019860 27.638 199 123 6 46 233 150 338 2.11e-16 82.8
MS.gene54146.t1 MTR_2g019860 25.862 232 157 6 43 262 89 317 3.65e-15 79.0
MS.gene54146.t1 MTR_2g019860 28.866 194 131 5 33 221 188 379 6.45e-14 75.1
MS.gene54146.t1 MTR_1g107265 28.014 282 171 10 43 295 69 347 2.60e-16 82.4
MS.gene54146.t1 MTR_1g043840 46.053 76 40 1 412 487 254 328 9.93e-16 79.0
MS.gene54146.t1 MTR_1g032230 29.286 140 77 1 352 491 15 132 1.04e-15 77.8
MS.gene54146.t1 MTR_7g113200 29.442 197 130 6 46 237 245 437 3.45e-15 79.0
MS.gene54146.t1 MTR_7g113200 24.710 259 176 5 42 292 186 433 1.18e-13 73.9
MS.gene54146.t1 MTR_7g113200 23.616 271 172 13 74 332 170 417 3.85e-11 66.2
MS.gene54146.t1 MTR_7g113200 29.442 197 130 6 46 237 245 437 4.44e-15 78.2
MS.gene54146.t1 MTR_7g113200 24.710 259 176 5 42 292 186 433 1.07e-13 73.9
MS.gene54146.t1 MTR_7g113200 23.913 276 165 14 74 332 170 417 5.33e-11 65.5
MS.gene54146.t1 MTR_5g065010 30.714 140 93 4 367 504 3 140 5.37e-15 76.6
MS.gene54146.t1 MTR_1g090740 28.571 175 118 5 42 213 88 258 8.17e-15 77.4
MS.gene54146.t1 MTR_1g492850 27.863 262 158 10 83 329 8 253 8.77e-15 77.4
MS.gene54146.t1 MTR_1g492850 27.863 262 158 10 83 329 8 253 1.12e-14 76.6
MS.gene54146.t1 MTR_1g062110 32.000 150 94 3 367 513 26 170 2.53e-14 74.3
MS.gene54146.t1 MTR_1g062110 32.000 150 94 3 367 513 26 170 4.02e-14 74.3
MS.gene54146.t1 MTR_8g024120 32.353 102 67 1 403 504 41 140 2.74e-13 71.6
MS.gene54146.t1 MTR_4g007980 28.458 253 144 12 42 263 120 366 3.18e-13 72.0
MS.gene54146.t1 MTR_7g068650 30.201 149 97 4 363 507 10 155 5.73e-13 70.9
MS.gene54146.t1 MTR_4g015790 26.857 175 110 4 363 520 9 182 2.52e-12 68.9
MS.gene54146.t1 MTR_2g036510 24.623 199 140 6 73 262 274 471 4.99e-12 68.9
MS.gene54146.t1 MTR_3g043900 29.870 154 98 6 367 517 17 163 5.34e-12 67.8
MS.gene54146.t1 MTR_3g091350 27.451 153 95 5 356 504 21 161 5.51e-11 64.7
MS.gene54146.t1 MTR_7g102720 24.427 131 94 1 387 517 20 145 8.01e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54146.t1 AT3G07720 70.645 310 91 0 33 342 13 322 2.49e-165 471
MS.gene54146.t1 AT5G48180 54.777 314 140 2 35 348 13 324 8.74e-121 358
MS.gene54146.t1 AT3G16400 50.160 313 154 2 33 344 156 467 3.49e-107 328
MS.gene54146.t1 AT3G16400 50.160 313 154 2 33 344 156 467 3.49e-107 328
MS.gene54146.t1 AT3G16410 46.939 343 173 3 3 344 282 616 8.78e-105 327
MS.gene54146.t1 AT2G33070 50.160 313 154 2 33 344 157 468 3.20e-104 321
MS.gene54146.t1 AT2G33070 50.160 313 154 2 33 344 157 468 3.20e-104 321
MS.gene54146.t1 AT2G33070 50.160 313 154 2 33 344 159 470 3.86e-104 320
MS.gene54146.t1 AT3G16390 49.521 313 153 4 33 344 156 464 6.68e-101 312
MS.gene54146.t1 AT3G16390 49.521 313 153 4 33 344 156 464 6.68e-101 312
MS.gene54146.t1 AT1G54040 45.399 326 156 6 37 344 11 332 3.15e-91 283
MS.gene54146.t1 AT1G54040 45.399 326 156 6 37 344 17 338 5.61e-91 282
MS.gene54146.t1 AT1G54040 45.038 262 123 5 100 344 1 258 2.30e-71 228
MS.gene54146.t1 AT2G25450 52.023 173 81 1 349 521 2 172 4.00e-55 189
MS.gene54146.t1 AT1G06620 48.521 169 86 1 353 521 12 179 2.08e-51 177
MS.gene54146.t1 AT2G30830 48.538 171 84 2 352 521 5 172 5.67e-51 178
MS.gene54146.t1 AT1G06620 48.521 169 86 1 353 521 12 179 1.95e-50 177
MS.gene54146.t1 AT2G30840 48.256 172 87 2 352 521 5 176 2.24e-50 175
MS.gene54146.t1 AT2G30840 48.256 172 87 2 352 521 5 176 1.24e-49 174
MS.gene54146.t1 AT2G30840 48.256 172 87 2 352 521 5 176 1.39e-49 174
MS.gene54146.t1 AT1G06650 43.646 181 85 3 351 521 9 182 1.06e-47 168
MS.gene54146.t1 AT1G03410 45.029 171 92 2 353 521 5 175 4.25e-47 168
MS.gene54146.t1 AT1G06650 43.646 181 85 3 351 521 9 182 4.49e-47 168
MS.gene54146.t1 AT1G06640 42.781 187 90 3 345 521 3 182 6.20e-47 165
MS.gene54146.t1 AT1G04350 45.029 171 90 2 352 521 6 173 8.10e-47 167
MS.gene54146.t1 AT1G03410 45.029 171 92 2 353 521 42 212 9.16e-47 168
MS.gene54146.t1 AT5G59540 44.318 176 96 2 344 517 1 176 9.23e-47 165
MS.gene54146.t1 AT1G06640 42.781 187 90 3 345 521 3 182 2.64e-46 164
MS.gene54146.t1 AT5G59540 44.318 176 96 2 344 517 1 176 6.59e-46 165
MS.gene54146.t1 AT1G06640 42.781 187 90 3 345 521 3 182 7.59e-46 165
MS.gene54146.t1 AT3G61400 43.678 174 92 2 353 521 10 182 7.10e-45 160
MS.gene54146.t1 AT3G61400 43.678 174 92 2 353 521 10 182 3.31e-44 160
MS.gene54146.t1 AT5G59530 45.506 178 92 4 347 521 3 178 5.50e-44 159
MS.gene54146.t1 AT1G03400 41.420 169 91 1 353 521 5 165 7.70e-44 159
MS.gene54146.t1 AT1G03400 41.420 169 91 1 353 521 5 165 2.27e-43 158
MS.gene54146.t1 AT1G06645 45.399 163 82 3 349 506 20 180 8.43e-42 154
MS.gene54146.t1 AT5G43450 39.773 176 103 2 347 521 3 176 1.80e-38 142
MS.gene54146.t1 AT5G43450 39.773 176 103 2 347 521 3 176 1.14e-37 142
MS.gene54146.t1 AT5G43440 38.122 181 107 4 344 521 1 179 4.39e-37 139
MS.gene54146.t1 AT5G43440 38.122 181 107 4 344 521 1 179 2.41e-36 139
MS.gene54146.t1 AT1G04380 35.955 178 95 3 344 521 1 159 1.65e-33 128
MS.gene54146.t1 AT1G04380 35.955 178 95 3 344 521 1 159 8.80e-33 128
MS.gene54146.t1 AT1G18610 28.696 345 216 8 32 359 14 345 2.59e-31 127
MS.gene54146.t1 AT1G18610 28.696 345 216 8 32 359 14 345 2.59e-31 127
MS.gene54146.t1 AT1G74150 26.230 366 237 8 41 396 20 362 3.26e-28 119
MS.gene54146.t1 AT1G74150 27.306 271 171 7 84 344 11 265 1.33e-15 80.1
MS.gene54146.t1 AT1G74150 26.222 225 155 6 37 252 69 291 5.04e-14 75.1
MS.gene54146.t1 AT1G74150 32.335 167 100 5 34 188 116 281 9.84e-11 64.7
MS.gene54146.t1 AT1G74150 26.431 367 236 9 41 396 20 363 3.19e-27 115
MS.gene54146.t1 AT1G74150 27.306 271 171 7 84 344 11 265 1.08e-15 80.5
MS.gene54146.t1 AT1G74150 26.222 225 155 6 37 252 69 291 4.25e-14 75.5
MS.gene54146.t1 AT1G74150 32.335 167 100 5 34 188 116 281 8.90e-11 64.7
MS.gene54146.t1 AT1G74150 26.431 367 236 9 41 396 20 363 3.59e-27 115
MS.gene54146.t1 AT1G74150 27.306 271 171 7 84 344 11 265 1.28e-15 80.1
MS.gene54146.t1 AT1G74150 26.222 225 155 6 37 252 69 291 4.88e-14 75.1
MS.gene54146.t1 AT1G74150 32.335 167 100 5 34 188 116 281 9.60e-11 64.7
MS.gene54146.t1 AT1G74150 25.610 328 213 7 78 396 42 347 2.00e-22 101
MS.gene54146.t1 AT1G74150 26.222 225 155 6 37 252 53 275 2.67e-14 75.9
MS.gene54146.t1 AT1G74150 32.051 156 99 4 34 183 100 254 6.56e-11 65.1
MS.gene54146.t1 AT5G18590 28.390 236 152 7 46 269 140 370 2.28e-19 92.0
MS.gene54146.t1 AT5G18590 25.541 231 159 4 43 262 79 307 4.88e-16 81.6
MS.gene54146.t1 AT5G18590 25.087 287 177 10 38 310 32 294 1.11e-14 77.4
MS.gene54146.t1 AT5G18590 28.390 236 152 7 46 269 140 370 2.28e-19 92.0
MS.gene54146.t1 AT5G18590 25.541 231 159 4 43 262 79 307 4.88e-16 81.6
MS.gene54146.t1 AT5G18590 25.087 287 177 10 38 310 32 294 1.11e-14 77.4
MS.gene54146.t1 AT3G13610 31.818 154 94 5 367 517 26 171 2.16e-18 87.4
MS.gene54146.t1 AT3G05420 23.843 432 282 12 19 427 163 570 6.71e-17 84.3
MS.gene54146.t1 AT3G05420 23.843 432 282 12 19 427 164 571 7.41e-17 84.3
MS.gene54146.t1 AT4G04670 34.043 141 90 2 43 183 376 513 5.87e-16 81.6
MS.gene54146.t1 AT4G04670 26.222 225 159 4 41 262 323 543 1.89e-15 80.1
MS.gene54146.t1 AT4G04670 28.161 174 120 3 92 262 322 493 5.25e-11 65.9
MS.gene54146.t1 AT5G04420 29.004 231 150 8 42 262 101 327 1.19e-15 80.1
MS.gene54146.t1 AT5G04420 29.004 231 150 8 42 262 101 327 1.19e-15 80.1
MS.gene54146.t1 AT5G04420 29.004 231 150 8 42 262 101 327 1.19e-15 80.1
MS.gene54146.t1 AT1G55290 29.221 154 99 4 367 517 25 171 1.40e-15 79.0
MS.gene54146.t1 AT5G50310 25.830 271 166 8 52 300 94 351 4.79e-15 78.6
MS.gene54146.t1 AT2G36690 31.788 151 94 3 367 513 20 165 2.94e-14 74.7
MS.gene54146.t1 AT2G36690 31.788 151 94 3 367 513 20 165 2.94e-14 74.7
MS.gene54146.t1 AT2G36360 27.586 261 160 8 83 329 8 253 3.40e-14 75.5
MS.gene54146.t1 AT2G36360 26.582 237 152 9 43 261 77 309 3.83e-11 65.9
MS.gene54146.t1 AT2G36360 27.586 261 160 8 83 329 8 253 3.55e-14 75.5
MS.gene54146.t1 AT2G36360 26.582 237 152 9 43 261 77 309 4.05e-11 65.9
MS.gene54146.t1 AT2G36360 27.586 261 160 8 83 329 8 253 3.55e-14 75.5
MS.gene54146.t1 AT2G36360 26.582 237 152 9 43 261 77 309 4.05e-11 65.9
MS.gene54146.t1 AT2G36360 27.586 261 160 8 83 329 8 253 3.60e-14 75.5
MS.gene54146.t1 AT2G36360 26.582 237 152 9 43 261 77 309 3.77e-11 65.9
MS.gene54146.t1 AT5G27630 25.087 287 188 8 19 292 164 436 1.03e-13 74.3
MS.gene54146.t1 AT5G27630 25.436 287 187 9 19 292 164 436 1.45e-13 73.9
MS.gene54146.t1 AT5G27630 25.436 287 187 9 19 292 164 436 1.61e-13 73.6
MS.gene54146.t1 AT5G27630 25.436 287 187 9 19 292 164 436 1.63e-13 73.6
MS.gene54146.t1 AT5G05600 26.966 178 123 4 348 520 7 182 4.13e-13 70.5
MS.gene54146.t1 AT5G05600 26.966 178 123 4 348 520 7 182 2.40e-12 68.9
MS.gene54146.t1 AT1G68050 27.928 222 141 11 77 287 287 500 2.81e-12 69.7
MS.gene54146.t1 AT1G68050 25.373 335 209 16 37 348 299 615 5.91e-11 65.5
MS.gene54146.t1 AT3G12900 28.662 157 105 5 367 521 21 172 3.34e-12 68.6
MS.gene54146.t1 AT1G51550 27.490 251 147 12 43 263 123 368 5.10e-12 68.6
MS.gene54146.t1 AT2G36360 26.667 270 160 9 83 329 8 262 6.39e-12 68.2
MS.gene54146.t1 AT2G44800 25.166 151 112 1 354 504 2 151 2.00e-11 66.2
MS.gene54146.t1 AT2G38240 27.879 165 108 5 361 520 5 163 2.12e-11 65.9
MS.gene54146.t1 AT4G10490 29.412 102 70 1 403 504 41 140 3.44e-11 65.1
MS.gene54146.t1 AT5G24530 27.966 118 70 2 405 512 39 151 8.41e-11 63.9

Find 156 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGAAGGCTCAATGATTTA+TGG 0.247369 2.2:+23313403 MS.gene54146:CDS
GTCTTGATAAAGAGTAAAAT+TGG 0.254512 2.2:-23314722 None:intergenic
TCCTCACCTTGGCATCTTGC+TGG 0.259911 2.2:-23314654 None:intergenic
GGAGAAACCATCTATGTATT+TGG 0.275442 2.2:+23313213 MS.gene54146:CDS
TGGAATTCCAGTTCATGTTT+TGG 0.293851 2.2:+23314600 MS.gene54146:CDS
ATGAACTACCACCGGTTTGC+AGG 0.303739 2.2:+23314806 MS.gene54146:CDS
GGACAGAAGGTTTATGCATT+TGG 0.314362 2.2:+23313057 MS.gene54146:CDS
CGTGGGTGGTGCGCATTTGC+CGG 0.322365 2.2:+23313822 MS.gene54146:CDS
TTGACACTAAAACCAACAAT+TGG 0.329490 2.2:+23313280 MS.gene54146:CDS
TTCAAAATGCAAGTGAGAAA+TGG 0.333502 2.2:+23314554 MS.gene54146:CDS
GGTGGTAGTTCATCAGCTTT+AGG 0.343905 2.2:-23314796 None:intergenic
ACATGTAACTTGTTATCAAC+GGG 0.356661 2.2:-23313102 None:intergenic
TCAAAATGCAAGTGAGAAAT+GGG 0.362845 2.2:+23314555 MS.gene54146:CDS
GAGTGTGATTTCCTACATTC+CGG 0.363139 2.2:+23310433 MS.gene54146:CDS
GGGAAACACATAATTGTATA+TGG 0.366421 2.2:+23313663 MS.gene54146:CDS
GTCCAAGGACTCATAGAAAA+TGG 0.369194 2.2:+23314379 MS.gene54146:CDS
ATCTCATCCAAAACATGAAC+TGG 0.379921 2.2:-23314607 None:intergenic
GTCCCTACAATTGACTTAAC+AGG 0.381724 2.2:+23314487 MS.gene54146:CDS
GCGCACCACCCACGTGGCCC+TGG 0.395028 2.2:-23313813 None:intergenic
ACGTGGCGGCGGTATGTTCC+CGG 0.395593 2.2:-23313166 None:intergenic
TGGTCAGTAGCCGATGTATC+CGG 0.396432 2.2:+23313147 MS.gene54146:CDS
TCTTCCACCAAATACATAGA+TGG 0.400451 2.2:-23313220 None:intergenic
ATCAAGACCAATCTGCTGAT+TGG 0.402608 2.2:+23314737 MS.gene54146:CDS
TGATTTCAAGTGGAGATGTT+GGG 0.404218 2.2:+23313307 MS.gene54146:CDS
ATTCCTGTTAAGTCAATTGT+AGG 0.415919 2.2:-23314490 None:intergenic
CCCTGGGCCACTGTTAGGCC+CGG 0.416654 2.2:-23313498 None:intergenic
TTCTTTCAAGTAATAAATCA+TGG 0.422804 2.2:+23314580 MS.gene54146:CDS
TGACGTGCATTTCTTCGATC+TGG 0.423289 2.2:+23313563 MS.gene54146:CDS
AGGAAGGCTCAATGATTTAT+GGG 0.428980 2.2:+23313404 MS.gene54146:CDS
TTGATTTCAAGTGGAGATGT+TGG 0.441999 2.2:+23313306 MS.gene54146:CDS
CCCATGTGACCTTGGTCACT+AGG 0.452252 2.2:-23313699 None:intergenic
TTGCAAGGGAAGAGGTGGGC+CGG 0.453359 2.2:+23313479 MS.gene54146:CDS
ACAACTTCATCTCTCAAAAC+AGG 0.453932 2.2:-23314523 None:intergenic
CTGACCATGTCAAGGTATCT+AGG 0.455547 2.2:-23313131 None:intergenic
TGAAATCAAGGCCCAATTGT+TGG 0.455604 2.2:-23313292 None:intergenic
TCACATGCTATTGCTGTAGT+AGG 0.455781 2.2:+23313036 MS.gene54146:CDS
TCCTCCGTAACAGTCGTAAA+CGG 0.455917 2.2:-23310474 None:intergenic
GCCGGGCCTAACAGTGGCCC+AGG 0.464383 2.2:+23313497 MS.gene54146:CDS
TTGGACGATAAGGTGGAATC+AGG 0.467150 2.2:+23313783 MS.gene54146:CDS
TAAGCCCACTTGTTTCCACT+TGG 0.467507 2.2:-23313602 None:intergenic
TGACACTAAAACCAACAATT+GGG 0.468892 2.2:+23313281 MS.gene54146:CDS
TCATCAGCTTTAGGAGGATC+GGG 0.470689 2.2:-23314787 None:intergenic
AGTGTGATTTCCTACATTCC+GGG 0.473232 2.2:+23310434 MS.gene54146:CDS
TGCAAGGGAAGAGGTGGGCC+GGG 0.474673 2.2:+23313480 MS.gene54146:CDS
AACATACCGCCGCCACGTGT+TGG 0.475046 2.2:+23313171 MS.gene54146:CDS
TTCATCAGCTTTAGGAGGAT+CGG 0.475741 2.2:-23314788 None:intergenic
TTTGGTGGCTGTGGAGTGGC+AGG 0.477833 2.2:+23313384 MS.gene54146:CDS
ATGGACGAGGTTGGACGATA+AGG 0.477851 2.2:+23313773 MS.gene54146:CDS
CAAGAGGGATTATTAGTGTA+TGG 0.478956 2.2:+23313861 MS.gene54146:CDS
CTTCCCTTGCAACTTTCACC+AGG 0.479391 2.2:-23313468 None:intergenic
AACATCTCCACTTGAAATCA+AGG 0.485982 2.2:-23313304 None:intergenic
AACACATAATTGTATATGGT+GGG 0.491224 2.2:+23313667 MS.gene54146:CDS
GAATTTGATGAGTCAAAGGT+TGG 0.494931 2.2:+23314355 MS.gene54146:CDS
TTTATGGGCCTTTGATGTTG+TGG 0.497159 2.2:+23313419 MS.gene54146:CDS
CCCTAGTGACCAAGGTCACA+TGG 0.498673 2.2:+23313698 MS.gene54146:CDS
TGTGTATGGTTTCGCTGGAA+TGG 0.500991 2.2:+23313533 MS.gene54146:CDS
GTGGAATCAGGTGATCATCC+AGG 0.503333 2.2:+23313795 MS.gene54146:CDS
TGGGTGGAATTTCCATCTCC+TGG 0.503407 2.2:+23313450 MS.gene54146:CDS
ATCATCCAGGGCCACGTGGG+TGG 0.507358 2.2:+23313808 MS.gene54146:CDS
TTGCAACTTTCACCAGGAGA+TGG 0.508173 2.2:-23313462 None:intergenic
CAGAAGGTTTATGCATTTGG+CGG 0.511271 2.2:+23313060 MS.gene54146:CDS
GAACAATCTAATATCAATCA+TGG 0.512601 2.2:+23314433 MS.gene54146:CDS
GACCAAGGTCACATGGGTGC+TGG 0.513231 2.2:+23313705 MS.gene54146:CDS
CACATGTAACTTGTTATCAA+CGG 0.514174 2.2:-23313103 None:intergenic
AAAGGAATTTGATGAGTCAA+AGG 0.522155 2.2:+23314351 MS.gene54146:CDS
GGTCAGTAGCCGATGTATCC+GGG 0.522496 2.2:+23313148 MS.gene54146:CDS
TGTCCCTCCAATCAGCAGAT+TGG 0.523116 2.2:-23314744 None:intergenic
ATTAAGACAAACCTGCAAAC+CGG 0.524849 2.2:-23314817 None:intergenic
CCATGTGACCTTGGTCACTA+GGG 0.525844 2.2:-23313698 None:intergenic
GTGGCTGTGGAGTGGCAGGA+AGG 0.527333 2.2:+23313388 MS.gene54146:CDS
GACTGTTACGGAGGAAGTAG+AGG 0.530958 2.2:+23310482 MS.gene54146:CDS
AAGCCCACTTGTTTCCACTT+GGG 0.532207 2.2:-23313601 None:intergenic
TGGGTTGTGTATGGTTTCGC+TGG 0.532785 2.2:+23313528 MS.gene54146:CDS
GCAAGATGCCAAGGTGAGGA+AGG 0.534102 2.2:+23314657 MS.gene54146:CDS
ATGGAGTGGTAGCTACGGTT+AGG 0.534804 2.2:-23313333 None:intergenic
ATTTCCTACATTCCGGGTGT+CGG 0.535545 2.2:+23310440 MS.gene54146:CDS
TGTTCCGTTTACGACTGTTA+CGG 0.535917 2.2:+23310470 MS.gene54146:CDS
ACGTCGGTCATCGGCAGTCA+TGG 0.536504 2.2:-23313352 None:intergenic
ATCTCCGACACCCGGAATGT+AGG 0.536844 2.2:-23310444 None:intergenic
GACACTATCATGGACGAGGT+TGG 0.537344 2.2:+23313764 MS.gene54146:CDS
AAGACCAATCTGCTGATTGG+AGG 0.540908 2.2:+23314740 MS.gene54146:CDS
TTGGCTGCCTCGGCTAGCAC+CGG 0.541808 2.2:-23313841 None:intergenic
GAGTCAAAGGTTGGTGTCCA+AGG 0.541962 2.2:+23314364 MS.gene54146:CDS
CTTGCCATCCACAACATCAA+AGG 0.543652 2.2:-23313427 None:intergenic
ATAATCCCTCTTGGCTGCCT+CGG 0.546368 2.2:-23313851 None:intergenic
TGGGCCTTTGATGTTGTGGA+TGG 0.546782 2.2:+23313423 MS.gene54146:CDS
CTCTCAAAACAGGATCATCA+TGG 0.547021 2.2:-23314513 None:intergenic
GACCAGCACCCATGTGACCT+TGG 0.549010 2.2:-23313707 None:intergenic
GGTGAAAGTTGCAAGGGAAG+AGG 0.549168 2.2:+23313471 MS.gene54146:CDS
TCATCAAGCCTGTCGTTGCT+AGG 0.553094 2.2:-23313894 None:intergenic
GAAAGTTGCAAGGGAAGAGG+TGG 0.555227 2.2:+23313474 MS.gene54146:CDS
AATTGGGCCTTGATTTCAAG+TGG 0.556457 2.2:+23313297 MS.gene54146:CDS
TTGTTTCAGCTTGATCAAAG+AGG 0.556708 2.2:+23312991 MS.gene54146:intron
GAAACCATCTATGTATTTGG+TGG 0.556915 2.2:+23313216 MS.gene54146:CDS
AACATACACACGTCGGTCAT+CGG 0.557266 2.2:-23313361 None:intergenic
AACAAGTTGAAAACACACTA+CGG 0.558479 2.2:-23313635 None:intergenic
GCTAGCCGAGGCAGCCAAGA+GGG 0.561545 2.2:+23313846 MS.gene54146:CDS
TTGATGTTGTGGATGGCAAG+TGG 0.565683 2.2:+23313430 MS.gene54146:CDS
TGGTTTCGCTGGAATGGAAG+TGG 0.566273 2.2:+23313539 MS.gene54146:CDS
ATCTCCTGGTGAAAGTTGCA+AGG 0.567843 2.2:+23313464 MS.gene54146:CDS
CATACACTAATAATCCCTCT+TGG 0.571128 2.2:-23313860 None:intergenic
TTCCTGTTAAGTCAATTGTA+GGG 0.572686 2.2:-23314489 None:intergenic
TGATGTTGTGGATGGCAAGT+GGG 0.578551 2.2:+23313431 MS.gene54146:CDS
TCCGTTTACGACTGTTACGG+AGG 0.582925 2.2:+23310473 MS.gene54146:CDS
AGACCAATCTGCTGATTGGA+GGG 0.584002 2.2:+23314741 MS.gene54146:CDS
ATAGTACTCCTTCCTCACCT+TGG 0.587132 2.2:-23314665 None:intergenic
GCAACTCACCTAGCAACGAC+AGG 0.588373 2.2:+23313886 MS.gene54146:CDS
CCGGGCCTAACAGTGGCCCA+GGG 0.590476 2.2:+23313498 MS.gene54146:CDS
TATTGCTGTAGTAGGACAGA+AGG 0.590763 2.2:+23313044 MS.gene54146:CDS
TAAAGCTGATGAACTACCAC+CGG 0.591747 2.2:+23314798 MS.gene54146:CDS
AGGTGGGCCGGGCCTAACAG+TGG 0.595141 2.2:+23313491 MS.gene54146:CDS
GAAAACACACTACGGGCCGT+TGG 0.595615 2.2:-23313627 None:intergenic
ACAAGTTGAAAACACACTAC+GGG 0.597063 2.2:-23313634 None:intergenic
AAACACATAATTGTATATGG+TGG 0.598952 2.2:+23313666 MS.gene54146:CDS
GACGAGGTTGGACGATAAGG+TGG 0.598960 2.2:+23313776 MS.gene54146:CDS
GTGACACCAACACGTGGCGG+CGG 0.598963 2.2:-23313177 None:intergenic
GAACAGAAATCTCCGACACC+CGG 0.599312 2.2:-23310452 None:intergenic
ACACATAATTGTATATGGTG+GGG 0.601078 2.2:+23313668 MS.gene54146:CDS
GATCAAAGAGGAATCTTGCA+AGG 0.605041 2.2:+23313003 MS.gene54146:CDS
GAGTGGTAGCTACGGTTAGG+AGG 0.607165 2.2:-23313330 None:intergenic
ACTAACTTTGAGCAAGAGCA+AGG 0.608068 2.2:-23313926 None:intergenic
GGTAGTTCATCAGCTTTAGG+AGG 0.608431 2.2:-23314793 None:intergenic
AACAAGTGGGCTTAAACCAA+CGG 0.609427 2.2:+23313611 MS.gene54146:CDS
TAGACACGGAGACACTATCA+TGG 0.609879 2.2:+23313754 MS.gene54146:CDS
GCATTTGCCGGTGCTAGCCG+AGG 0.611791 2.2:+23313834 MS.gene54146:CDS
GAAATAGACCCTAGTGACCA+AGG 0.612642 2.2:+23313690 MS.gene54146:CDS
CGGAGACACTATCATGGACG+AGG 0.615534 2.2:+23313760 MS.gene54146:CDS
GGTGTCACGATGGCTGCAGT+TGG 0.615550 2.2:+23313192 MS.gene54146:CDS
TGGAATCAGGTGATCATCCA+GGG 0.616772 2.2:+23313796 MS.gene54146:CDS
TTGTTATCAACGGGGACACG+TGG 0.620860 2.2:-23313093 None:intergenic
ACCAGCAAGATGCCAAGGTG+AGG 0.623160 2.2:+23314653 MS.gene54146:CDS
ATTTCACCAGCAAGATGCCA+AGG 0.623273 2.2:+23314648 MS.gene54146:CDS
TCTCCTGGTGAAAGTTGCAA+GGG 0.623404 2.2:+23313465 MS.gene54146:CDS
TGTTGTGGATGGCAAGTGGG+TGG 0.625429 2.2:+23313434 MS.gene54146:CDS
TGGGCCCAAGTGGAAACAAG+TGG 0.628859 2.2:+23313597 MS.gene54146:CDS
GTGATCATCCAGGGCCACGT+GGG 0.629702 2.2:+23313805 MS.gene54146:CDS
CGGTATGTTCCCGGATACAT+CGG 0.640548 2.2:-23313157 None:intergenic
CAGTCATGGAGTGGTAGCTA+CGG 0.640561 2.2:-23313338 None:intergenic
GGTGATCATCCAGGGCCACG+TGG 0.641702 2.2:+23313804 MS.gene54146:CDS
ATCGGCTACTGACCATGTCA+AGG 0.646523 2.2:-23313139 None:intergenic
CCTAGTGACCAAGGTCACAT+GGG 0.649054 2.2:+23313699 MS.gene54146:CDS
GGTCATCGGCAGTCATGGAG+TGG 0.651183 2.2:-23313347 None:intergenic
TGTTCACAATAGAACATGCG+TGG 0.652888 2.2:-23314415 None:intergenic
GAGGGATTATTAGTGTATGG+TGG 0.654652 2.2:+23313864 MS.gene54146:CDS
TGCTAGCCGAGGCAGCCAAG+AGG 0.662151 2.2:+23313845 MS.gene54146:CDS
GGGCCCAAGTGGAAACAAGT+GGG 0.666793 2.2:+23313598 MS.gene54146:CDS
CAAAATGCAAGTGAGAAATG+GGG 0.669107 2.2:+23314556 MS.gene54146:CDS
AAAGTTGCAAGGGAAGAGGT+GGG 0.669531 2.2:+23313475 MS.gene54146:CDS
GCCATCGTGACACCAACACG+TGG 0.675349 2.2:-23313183 None:intergenic
GCCACGTGTTGGTGTCACGA+TGG 0.676673 2.2:+23313182 MS.gene54146:CDS
ATCGTGACACCAACACGTGG+CGG 0.680472 2.2:-23313180 None:intergenic
GCAAATGCGCACCACCCACG+TGG 0.684596 2.2:-23313819 None:intergenic
TGAGCTTTATGCATTAGACA+CGG 0.693180 2.2:+23313740 MS.gene54146:CDS
AAGACAAACCTGCAAACCGG+TGG 0.695495 2.2:-23314814 None:intergenic
CATGTAACTTGTTATCAACG+GGG 0.715551 2.2:-23313101 None:intergenic
ACGACCTAGATACCTTGACA+TGG 0.737782 2.2:+23313127 MS.gene54146:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATATAAATCACAAA+TGG - chr2.2:23311434-23311453 None:intergenic 10.0%
!! CTATTATGATAAAAATAAAA+AGG - chr2.2:23312423-23312442 None:intergenic 10.0%
!!! AACTTTTAATAAATAATTGT+TGG + chr2.2:23312331-23312350 MS.gene54146:intron 10.0%
!!! AATTTTTTAATAAATAACTG+TGG - chr2.2:23310619-23310638 None:intergenic 10.0%
!!! GTTATAGTTTTTAAAAAAAA+TGG + chr2.2:23310824-23310843 MS.gene54146:intron 10.0%
!!! TAATTTTTCAATATAATCAA+AGG - chr2.2:23312786-23312805 None:intergenic 10.0%
!!! TGTTTTAGATTTAAAAAAAA+TGG - chr2.2:23311241-23311260 None:intergenic 10.0%
!!! TTTTAACAAAGAAATTTTTA+TGG + chr2.2:23310881-23310900 MS.gene54146:intron 10.0%
!!! TTTTTAAAAACTATAACAAA+CGG - chr2.2:23310821-23310840 None:intergenic 10.0%
!!! TTTTTTAAATCTAAAACAAA+CGG + chr2.2:23311243-23311262 MS.gene54146:intron 10.0%
!! AAACTAACAAATAGTTAATA+AGG + chr2.2:23311855-23311874 MS.gene54146:intron 15.0%
!! AATAACATATATTTAAGCTA+AGG - chr2.2:23314240-23314259 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr2.2:23311864-23311883 MS.gene54146:intron 15.0%
!! AATATTCTTAAAATTCTCTT+AGG + chr2.2:23312862-23312881 MS.gene54146:intron 15.0%
!! AGAAATAATGTATTTGTATT+TGG + chr2.2:23312097-23312116 MS.gene54146:intron 15.0%
!! ATCGATATATAAATAATACT+CGG - chr2.2:23311608-23311627 None:intergenic 15.0%
!! ATTTGAATTGTATTAGTATA+AGG + chr2.2:23311510-23311529 MS.gene54146:intron 15.0%
!! TAAAAGAAAACTATTTCAAA+TGG + chr2.2:23311014-23311033 MS.gene54146:intron 15.0%
!! TAAAATTAAAATTATGTAGC+AGG + chr2.2:23314295-23314314 MS.gene54146:intron 15.0%
!!! AGAAAAATCCTTTTATTAAT+TGG + chr2.2:23310703-23310722 MS.gene54146:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr2.2:23311739-23311758 None:intergenic 15.0%
!!! CATTTTGTTGTAATTTTTTT+TGG + chr2.2:23310967-23310986 MS.gene54146:intron 15.0%
!!! GAAAAATCCTTTTATTAATT+GGG + chr2.2:23310704-23310723 MS.gene54146:intron 15.0%
!!! GTCAATTTTTTCTTATAAAT+AGG - chr2.2:23312061-23312080 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr2.2:23311841-23311860 None:intergenic 15.0%
!!! TGATTTTGTAGAATTAATTT+TGG - chr2.2:23310785-23310804 None:intergenic 15.0%
!!! TGTATACTCTATTTTTATTT+GGG + chr2.2:23312220-23312239 MS.gene54146:intron 15.0%
!!! TTTCTTTGTATTTCTAAAAA+TGG - chr2.2:23311215-23311234 None:intergenic 15.0%
!!! TTTTTAAATCTAAAACAAAC+GGG + chr2.2:23311244-23311263 MS.gene54146:intron 15.0%
!! AATTATAGAACAAATGTTTC+CGG - chr2.2:23311361-23311380 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr2.2:23311779-23311798 None:intergenic 20.0%
!! AGTCATAAATAGTATTTGTA+GGG - chr2.2:23312888-23312907 None:intergenic 20.0%
!! ATTTATATATCGATGATGAT+AGG + chr2.2:23311614-23311633 MS.gene54146:intron 20.0%
!! TAAACTATATACATTCATTC+AGG + chr2.2:23311463-23311482 MS.gene54146:intron 20.0%
!! TTTCAATAAAAGTTAGAACA+CGG - chr2.2:23310595-23310614 None:intergenic 20.0%
!!! AGTTGAGATTTCAATTTTTT+AGG - chr2.2:23312751-23312770 None:intergenic 20.0%
!!! GTCAACTTTTTCTTATAAAT+AGG + chr2.2:23312166-23312185 MS.gene54146:intron 20.0%
!!! GTGTATACTCTATTTTTATT+TGG + chr2.2:23312219-23312238 MS.gene54146:intron 20.0%
!!! GTTGAGATTTCAATTTTTTA+GGG - chr2.2:23312750-23312769 None:intergenic 20.0%
!!! TGTTTTCAACTTGTTTAATT+GGG + chr2.2:23313643-23313662 MS.gene54146:CDS 20.0%
!!! TTCATTTTAAAAAATGTACC+AGG - chr2.2:23312950-23312969 None:intergenic 20.0%
!!! TTCTTTCAAGTAATAAATCA+TGG + chr2.2:23314580-23314599 MS.gene54146:CDS 20.0%
!!! TTTTTTCTTATAAATAGGAC+CGG - chr2.2:23312056-23312075 None:intergenic 20.0%
! AAACACATAATTGTATATGG+TGG + chr2.2:23313666-23313685 MS.gene54146:CDS 25.0%
! AAATTCTCAGAAACTATTCA+AGG - chr2.2:23312829-23312848 None:intergenic 25.0%
! AACACATAATTGTATATGGT+GGG + chr2.2:23313667-23313686 MS.gene54146:CDS 25.0%
! AACATATATTTAAGCTAAGG+CGG - chr2.2:23314237-23314256 None:intergenic 25.0%
! AACCTAACCCAATTAATAAA+AGG - chr2.2:23310714-23310733 None:intergenic 25.0%
! AGCTTATATGAGCTTATTTA+TGG - chr2.2:23312606-23312625 None:intergenic 25.0%
! ATACTAAACAATAATGAGAG+TGG + chr2.2:23311975-23311994 MS.gene54146:intron 25.0%
! ATTATAGAACAAATGTTTCC+GGG - chr2.2:23311360-23311379 None:intergenic 25.0%
! CTACAAAATCAATTCATTCA+GGG + chr2.2:23310794-23310813 MS.gene54146:intron 25.0%
! GAACAATCTAATATCAATCA+TGG + chr2.2:23314433-23314452 MS.gene54146:CDS 25.0%
! GACAATCAAAAGTTTATGTT+TGG - chr2.2:23312632-23312651 None:intergenic 25.0%
! GAGTCATAAATAGTATTTGT+AGG - chr2.2:23312889-23312908 None:intergenic 25.0%
! GTCTTGATAAAGAGTAAAAT+TGG - chr2.2:23314725-23314744 None:intergenic 25.0%
! GTTTCAAATGAAAAATTCGT+TGG + chr2.2:23310907-23310926 MS.gene54146:intron 25.0%
! TACAAAATCAATTCATTCAG+GGG + chr2.2:23310795-23310814 MS.gene54146:intron 25.0%
! TAGGTTTCTTAAATATGGAA+TGG + chr2.2:23310728-23310747 MS.gene54146:intron 25.0%
! TCTACAAAATCAATTCATTC+AGG + chr2.2:23310793-23310812 MS.gene54146:intron 25.0%
! TTAAAGCAGTAAGTTTATGT+TGG - chr2.2:23310669-23310688 None:intergenic 25.0%
! TTAAAGTAGTAACTTTGACT+TGG + chr2.2:23312281-23312300 MS.gene54146:intron 25.0%
! TTCAATAAAAGTTAGAACAC+GGG - chr2.2:23310594-23310613 None:intergenic 25.0%
! TTCTTAAATATGGAATGGTT+TGG + chr2.2:23310733-23310752 MS.gene54146:intron 25.0%
!! ATCCTTTTATTAATTGGGTT+AGG + chr2.2:23310709-23310728 MS.gene54146:intron 25.0%
!! CTTGTTATGAAATACAAGTA+CGG - chr2.2:23314272-23314291 None:intergenic 25.0%
!! CTTTTTCTTATAAATAGGAC+CGG + chr2.2:23312171-23312190 MS.gene54146:intron 25.0%
!! GGATTTTTCTAAATGTTAAG+AGG - chr2.2:23310693-23310712 None:intergenic 25.0%
!!! AAACGACACTCATTTTAAAA+CGG + chr2.2:23311947-23311966 MS.gene54146:intron 25.0%
!!! GGAAAGATAAACAACTTTTT+TGG - chr2.2:23314704-23314723 None:intergenic 25.0%
!!! GTAGTGAAAATTGATTTTGA+GGG - chr2.2:23311270-23311289 None:intergenic 25.0%
!!! GTGTTTTCAACTTGTTTAAT+TGG + chr2.2:23313642-23313661 MS.gene54146:CDS 25.0%
!!! TTTAAAATGAGTGTCGTTTT+AGG - chr2.2:23311946-23311965 None:intergenic 25.0%
AAAGGAATTTGATGAGTCAA+AGG + chr2.2:23314351-23314370 MS.gene54146:CDS 30.0%
AAGTACTTGTGAGACTATTT+GGG - chr2.2:23312579-23312598 None:intergenic 30.0%
ACACATAATTGTATATGGTG+GGG + chr2.2:23313668-23313687 MS.gene54146:CDS 30.0%
ATTCCTGTTAAGTCAATTGT+AGG - chr2.2:23314493-23314512 None:intergenic 30.0%
CTGGTATTTCAAATAGAACT+TGG + chr2.2:23314192-23314211 MS.gene54146:intron 30.0%
GGGAAACACATAATTGTATA+TGG + chr2.2:23313663-23313682 MS.gene54146:CDS 30.0%
TAAGTACTTGTGAGACTATT+TGG - chr2.2:23312580-23312599 None:intergenic 30.0%
TCAAAATGCAAGTGAGAAAT+GGG + chr2.2:23314555-23314574 MS.gene54146:CDS 30.0%
TGACACTAAAACCAACAATT+GGG + chr2.2:23313281-23313300 MS.gene54146:CDS 30.0%
TGACAGAAAAAGTGAACTAA+AGG + chr2.2:23314333-23314352 MS.gene54146:CDS 30.0%
TTCAAAATGCAAGTGAGAAA+TGG + chr2.2:23314554-23314573 MS.gene54146:CDS 30.0%
TTCCTGTTAAGTCAATTGTA+GGG - chr2.2:23314492-23314511 None:intergenic 30.0%
TTGACACTAAAACCAACAAT+TGG + chr2.2:23313280-23313299 MS.gene54146:CDS 30.0%
TTGGAAATTAGTTGACAATG+AGG + chr2.2:23314211-23314230 MS.gene54146:intron 30.0%
! AACAAGTTGAAAACACACTA+CGG - chr2.2:23313638-23313657 None:intergenic 30.0%
! CAAGTTCTATTTGAAATACC+AGG - chr2.2:23314194-23314213 None:intergenic 30.0%
! GTAATGTGCAGAGTATTAAT+TGG - chr2.2:23311816-23311835 None:intergenic 30.0%
! TGGGTTAGGTTTCTTAAATA+TGG + chr2.2:23310723-23310742 MS.gene54146:intron 30.0%
! TTTCAATGTTTTCTGACCAA+AGG - chr2.2:23311579-23311598 None:intergenic 30.0%
! TTTTGGATGAGATGATCAAA+GGG + chr2.2:23314617-23314636 MS.gene54146:CDS 30.0%
!! ACATGTAACTTGTTATCAAC+GGG - chr2.2:23313105-23313124 None:intergenic 30.0%
!! CACATGTAACTTGTTATCAA+CGG - chr2.2:23313106-23313125 None:intergenic 30.0%
!! GAATGGTTTGGTTATTGATT+TGG + chr2.2:23310745-23310764 MS.gene54146:intron 30.0%
!! GGTAGTGAAAATTGATTTTG+AGG - chr2.2:23311271-23311290 None:intergenic 30.0%
!! GTTTGGTTATTGATTTGGTT+AGG + chr2.2:23310750-23310769 MS.gene54146:intron 30.0%
AAAGCGTGTTTAATACAACC+TGG + chr2.2:23314173-23314192 MS.gene54146:intron 35.0%
AACATCTCCACTTGAAATCA+AGG - chr2.2:23313307-23313326 None:intergenic 35.0%
AATGAGAGTGGTTGTAAATG+TGG + chr2.2:23311987-23312006 MS.gene54146:intron 35.0%
ACAACTTCATCTCTCAAAAC+AGG - chr2.2:23314526-23314545 None:intergenic 35.0%
ACCATTTCACAAAACTGGTT+TGG - chr2.2:23310561-23310580 None:intergenic 35.0%
ACTATATCCTGATGAGCTTA+TGG + chr2.2:23312500-23312519 MS.gene54146:intron 35.0%
AGGAAGGCTCAATGATTTAT+GGG + chr2.2:23313404-23313423 MS.gene54146:CDS 35.0%
ATCTCATCCAAAACATGAAC+TGG - chr2.2:23314610-23314629 None:intergenic 35.0%
ATGTTATAAGCTACTCCATC+CGG - chr2.2:23312193-23312212 None:intergenic 35.0%
ATTAAGACAAACCTGCAAAC+CGG - chr2.2:23314820-23314839 None:intergenic 35.0%
ATTAGACCTTACTTCACCTT+TGG + chr2.2:23311560-23311579 MS.gene54146:intron 35.0%
ATTGTGCTAAAAGTGATTCC+TGG + chr2.2:23312929-23312948 MS.gene54146:intron 35.0%
CAAAATGCAAGTGAGAAATG+GGG + chr2.2:23314556-23314575 MS.gene54146:CDS 35.0%
CAAGAGGGATTATTAGTGTA+TGG + chr2.2:23313861-23313880 MS.gene54146:CDS 35.0%
CATACACTAATAATCCCTCT+TGG - chr2.2:23313863-23313882 None:intergenic 35.0%
CTGAAACCATTTCACAAAAC+TGG - chr2.2:23310566-23310585 None:intergenic 35.0%
CTTATTTCCATAAGCTCATC+AGG - chr2.2:23312510-23312529 None:intergenic 35.0%
GAAACCATCTATGTATTTGG+TGG + chr2.2:23313216-23313235 MS.gene54146:CDS 35.0%
GAATTTGATGAGTCAAAGGT+TGG + chr2.2:23314355-23314374 MS.gene54146:CDS 35.0%
GCATATGTGTGATCAATTCT+AGG + chr2.2:23313976-23313995 MS.gene54146:intron 35.0%
GGAGAAACCATCTATGTATT+TGG + chr2.2:23313213-23313232 MS.gene54146:CDS 35.0%
GGTTGTAAATGTGGTGAATT+GGG + chr2.2:23311996-23312015 MS.gene54146:intron 35.0%
GTGCAATATTGCACATGTTA+AGG - chr2.2:23312412-23312393 None:intergenic 35.0%
TCAGTATGTCATGTGAACTT+AGG + chr2.2:23314019-23314038 MS.gene54146:intron 35.0%
TCTTCCACCAAATACATAGA+TGG - chr2.2:23313223-23313242 None:intergenic 35.0%
TGGTTGTAAATGTGGTGAAT+TGG + chr2.2:23311995-23312014 MS.gene54146:intron 35.0%
TGTGGTGAATTGGGTATAAA+TGG + chr2.2:23312005-23312024 MS.gene54146:intron 35.0%
TTCTCAGAAACTATTCAAGG+TGG - chr2.2:23312826-23312845 None:intergenic 35.0%
TTCTTATAAATAGGACCGGA+GGG - chr2.2:23312194-23312175 None:intergenic 35.0%
TTCTTATAAATAGGACCGGA+TGG + chr2.2:23312175-23312194 MS.gene54146:intron 35.0%
TTGTTTCAGCTTGATCAAAG+AGG + chr2.2:23312991-23313010 MS.gene54146:intron 35.0%
TTTCTTATAAATAGGACCGG+AGG - chr2.2:23312193-23312174 None:intergenic 35.0%
! ACAAGTTGAAAACACACTAC+GGG - chr2.2:23313637-23313656 None:intergenic 35.0%
! ATGTGCAGAGTATTAATTGG+AGG - chr2.2:23311813-23311832 None:intergenic 35.0%
! CTATAGTGAAGTATCTTGTG+TGG - chr2.2:23312695-23312714 None:intergenic 35.0%
! GGAAAAATATGGGTTGTGTA+TGG + chr2.2:23313519-23313538 MS.gene54146:CDS 35.0%
! TGAGCTTTATGCATTAGACA+CGG + chr2.2:23313740-23313759 MS.gene54146:CDS 35.0%
! TGATTTCAAGTGGAGATGTT+GGG + chr2.2:23313307-23313326 MS.gene54146:CDS 35.0%
! TGGAATTCCAGTTCATGTTT+TGG + chr2.2:23314600-23314619 MS.gene54146:CDS 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr2.2:23311812-23311831 None:intergenic 35.0%
! TTGATTTCAAGTGGAGATGT+TGG + chr2.2:23313306-23313325 MS.gene54146:CDS 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr2.2:23311713-23311732 None:intergenic 35.0%
!! CAGTTTTGTGAAATGGTTTC+AGG + chr2.2:23310564-23310583 MS.gene54146:intron 35.0%
!! CATGTAACTTGTTATCAACG+GGG - chr2.2:23313104-23313123 None:intergenic 35.0%
!! GTTTTGGATGAGATGATCAA+AGG + chr2.2:23314616-23314635 MS.gene54146:CDS 35.0%
!! TCCAAACCAGTTTTGTGAAA+TGG + chr2.2:23310557-23310576 MS.gene54146:intron 35.0%
!!! AACTTTTTTGGTGAGATCAC+GGG - chr2.2:23314692-23314711 None:intergenic 35.0%
!!! CAACTTTTTTGGTGAGATCA+CGG - chr2.2:23314693-23314712 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+GGG + chr2.2:23311951-23311970 MS.gene54146:intron 35.0%
AATTGGGCCTTGATTTCAAG+TGG + chr2.2:23313297-23313316 MS.gene54146:CDS 40.0%
ACTAACTTTGAGCAAGAGCA+AGG - chr2.2:23313929-23313948 None:intergenic 40.0%
AGTGTGATTTCCTACATTCC+GGG + chr2.2:23310434-23310453 MS.gene54146:CDS 40.0%
ATCAAGACCAATCTGCTGAT+TGG + chr2.2:23314737-23314756 MS.gene54146:CDS 40.0%
CACCAAAAACATACACACGT+CGG - chr2.2:23313371-23313390 None:intergenic 40.0%
CAGAAGGTTTATGCATTTGG+CGG + chr2.2:23313060-23313079 MS.gene54146:CDS 40.0%
CAGGAAGGCTCAATGATTTA+TGG + chr2.2:23313403-23313422 MS.gene54146:CDS 40.0%
CTCTCAAAACAGGATCATCA+TGG - chr2.2:23314516-23314535 None:intergenic 40.0%
GAGGGATTATTAGTGTATGG+TGG + chr2.2:23313864-23313883 MS.gene54146:CDS 40.0%
GAGTGTGATTTCCTACATTC+CGG + chr2.2:23310433-23310452 MS.gene54146:CDS 40.0%
GATCAAAGAGGAATCTTGCA+AGG + chr2.2:23313003-23313022 MS.gene54146:CDS 40.0%
GGACAGAAGGTTTATGCATT+TGG + chr2.2:23313057-23313076 MS.gene54146:CDS 40.0%
GTCCAAGGACTCATAGAAAA+TGG + chr2.2:23314379-23314398 MS.gene54146:CDS 40.0%
TAAAGCTGATGAACTACCAC+CGG + chr2.2:23314798-23314817 MS.gene54146:CDS 40.0%
TATTGCTGTAGTAGGACAGA+AGG + chr2.2:23313044-23313063 MS.gene54146:CDS 40.0%
TCACATGCTATTGCTGTAGT+AGG + chr2.2:23313036-23313055 MS.gene54146:CDS 40.0%
TCAGAAACTATTCAAGGTGG+TGG - chr2.2:23312823-23312842 None:intergenic 40.0%
TGAAATCAAGGCCCAATTGT+TGG - chr2.2:23313295-23313314 None:intergenic 40.0%
TGCTCTTGCTCAAAGTTAGT+TGG + chr2.2:23313929-23313948 MS.gene54146:intron 40.0%
TGTTCACAATAGAACATGCG+TGG - chr2.2:23314418-23314437 None:intergenic 40.0%
TGTTCCGTTTACGACTGTTA+CGG + chr2.2:23310470-23310489 MS.gene54146:CDS 40.0%
TTCTGACCAAAGGTGAAGTA+AGG - chr2.2:23311569-23311588 None:intergenic 40.0%
TTTATGGGCCTTTGATGTTG+TGG + chr2.2:23313419-23313438 MS.gene54146:CDS 40.0%
! AACAAGTGGGCTTAAACCAA+CGG + chr2.2:23313611-23313630 MS.gene54146:CDS 40.0%
! ACACAACCCATATTTTTCCC+TGG - chr2.2:23313518-23313537 None:intergenic 40.0%
! ACTCAACATTTTACTCCCTC+CGG + chr2.2:23312034-23312053 MS.gene54146:intron 40.0%
! CACAACCCATATTTTTCCCT+GGG - chr2.2:23313517-23313536 None:intergenic 40.0%
! CACCATTTTCTATGAGTCCT+TGG - chr2.2:23314384-23314403 None:intergenic 40.0%
! CACGAAGAGTTGGTTGATTT+GGG + chr2.2:23311311-23311330 MS.gene54146:intron 40.0%
! GGACACACTTGCATTTTTCT+GGG + chr2.2:23314762-23314781 MS.gene54146:CDS 40.0%
! GTCCCTACAATTGACTTAAC+AGG + chr2.2:23314487-23314506 MS.gene54146:CDS 40.0%
! TCACGAAGAGTTGGTTGATT+TGG + chr2.2:23311310-23311329 MS.gene54146:intron 40.0%
!! TCACAAAACTGGTTTGGAAC+CGG - chr2.2:23310555-23310574 None:intergenic 40.0%
!! TTCATCAGCTTTAGGAGGAT+CGG - chr2.2:23314791-23314810 None:intergenic 40.0%
!!! CGACACTCATTTTAAAACGG+AGG + chr2.2:23311950-23311969 MS.gene54146:intron 40.0%
!!! GACACTCATTTTGAAACGGA+TGG - chr2.2:23311709-23311728 None:intergenic 40.0%
AAAGTTGCAAGGGAAGAGGT+GGG + chr2.2:23313475-23313494 MS.gene54146:CDS 45.0%
AACATACACACGTCGGTCAT+CGG - chr2.2:23313364-23313383 None:intergenic 45.0%
AAGCCCACTTGTTTCCACTT+GGG - chr2.2:23313604-23313623 None:intergenic 45.0%
ACGACCTAGATACCTTGACA+TGG + chr2.2:23313127-23313146 MS.gene54146:CDS 45.0%
AGTGGCCCAGGGAAAAATAT+GGG + chr2.2:23313509-23313528 MS.gene54146:CDS 45.0%
ATAGTACTCCTTCCTCACCT+TGG - chr2.2:23314668-23314687 None:intergenic 45.0%
ATCTCCTGGTGAAAGTTGCA+AGG + chr2.2:23313464-23313483 MS.gene54146:CDS 45.0%
ATTTCACCAGCAAGATGCCA+AGG + chr2.2:23314648-23314667 MS.gene54146:CDS 45.0%
ATTTCCTACATTCCGGGTGT+CGG + chr2.2:23310440-23310459 MS.gene54146:CDS 45.0%
CGATCTGGCCCAAAAAACAT+GGG + chr2.2:23313578-23313597 MS.gene54146:CDS 45.0%
CTTGCCATCCACAACATCAA+AGG - chr2.2:23313430-23313449 None:intergenic 45.0%
GAAATAGACCCTAGTGACCA+AGG + chr2.2:23313690-23313709 MS.gene54146:CDS 45.0%
GGTGGTAGTTCATCAGCTTT+AGG - chr2.2:23314799-23314818 None:intergenic 45.0%
TAAGCCCACTTGTTTCCACT+TGG - chr2.2:23313605-23313624 None:intergenic 45.0%
TAGACACGGAGACACTATCA+TGG + chr2.2:23313754-23313773 MS.gene54146:CDS 45.0%
TCCTCCGTAACAGTCGTAAA+CGG - chr2.2:23310477-23310496 None:intergenic 45.0%
TCGATCTGGCCCAAAAAACA+TGG + chr2.2:23313577-23313596 MS.gene54146:CDS 45.0%
TCTCCTGGTGAAAGTTGCAA+GGG + chr2.2:23313465-23313484 MS.gene54146:CDS 45.0%
TGACGTGCATTTCTTCGATC+TGG + chr2.2:23313563-23313582 MS.gene54146:CDS 45.0%
TGATGTTGTGGATGGCAAGT+GGG + chr2.2:23313431-23313450 MS.gene54146:CDS 45.0%
TGGAATCAGGTGATCATCCA+GGG + chr2.2:23313796-23313815 MS.gene54146:CDS 45.0%
TGTGTATGGTTTCGCTGGAA+TGG + chr2.2:23313533-23313552 MS.gene54146:CDS 45.0%
TTGATGTTGTGGATGGCAAG+TGG + chr2.2:23313430-23313449 MS.gene54146:CDS 45.0%
TTGCAACTTTCACCAGGAGA+TGG - chr2.2:23313465-23313484 None:intergenic 45.0%
TTGGACGATAAGGTGGAATC+AGG + chr2.2:23313783-23313802 MS.gene54146:CDS 45.0%
! AAGACCAATCTGCTGATTGG+AGG + chr2.2:23314740-23314759 MS.gene54146:CDS 45.0%
! AGACCAATCTGCTGATTGGA+GGG + chr2.2:23314741-23314760 MS.gene54146:CDS 45.0%
! CTGACCATGTCAAGGTATCT+AGG - chr2.2:23313134-23313153 None:intergenic 45.0%
! GACCGACGTGTGTATGTTTT+TGG + chr2.2:23313366-23313385 MS.gene54146:CDS 45.0%
! GACGTGTGTGTTTGGTTTAG+CGG - chr2.2:23311292-23311311 None:intergenic 45.0%
! GGGACACACTTGCATTTTTC+TGG + chr2.2:23314761-23314780 MS.gene54146:CDS 45.0%
! GTTCTAAACCTAACCCGAAC+CGG + chr2.2:23310533-23310552 MS.gene54146:intron 45.0%
!! AAACTGGTTTGGAACCGGTT+CGG - chr2.2:23310550-23310569 None:intergenic 45.0%
!! GGTAGTTCATCAGCTTTAGG+AGG - chr2.2:23314796-23314815 None:intergenic 45.0%
!! TCATCAGCTTTAGGAGGATC+GGG - chr2.2:23314790-23314809 None:intergenic 45.0%
!!! ATGGGTGCTGGTCAATTTTC+AGG + chr2.2:23313717-23313736 MS.gene54146:CDS 45.0%
!!! CACTTGGGCCCATGTTTTTT+GGG - chr2.2:23313589-23313608 None:intergenic 45.0%
!!! CGACGTGTGTATGTTTTTGG+TGG + chr2.2:23313369-23313388 MS.gene54146:CDS 45.0%
!!! GTGTATGTTTTTGGTGGCTG+TGG + chr2.2:23313375-23313394 MS.gene54146:CDS 45.0%
!! TATTATGATAAAAATAAAAA+GGG - chr2.2:23312422-23312441 None:intergenic 5.0%
AAGACAAACCTGCAAACCGG+TGG - chr2.2:23314817-23314836 None:intergenic 50.0%
ACACACACGTCACGAAGAGT+TGG + chr2.2:23311301-23311320 MS.gene54146:intron 50.0%
ATAATCCCTCTTGGCTGCCT+CGG - chr2.2:23313854-23313873 None:intergenic 50.0%
ATCGGCTACTGACCATGTCA+AGG - chr2.2:23313142-23313161 None:intergenic 50.0%
ATGGACGAGGTTGGACGATA+AGG + chr2.2:23313773-23313792 MS.gene54146:CDS 50.0%
ATGGAGTGGTAGCTACGGTT+AGG - chr2.2:23313336-23313355 None:intergenic 50.0%
CAGTCATGGAGTGGTAGCTA+CGG - chr2.2:23313341-23313360 None:intergenic 50.0%
CAGTGGCCCAGGGAAAAATA+TGG + chr2.2:23313508-23313527 MS.gene54146:CDS 50.0%
CCAAAAAACATGGGCCCAAG+TGG + chr2.2:23313587-23313606 MS.gene54146:CDS 50.0%
CCATGTGACCTTGGTCACTA+GGG - chr2.2:23313701-23313720 None:intergenic 50.0%
CCTAGTGACCAAGGTCACAT+GGG + chr2.2:23313699-23313718 MS.gene54146:CDS 50.0%
CGGTATGTTCCCGGATACAT+CGG - chr2.2:23313160-23313179 None:intergenic 50.0%
CTCTTCGTGACGTGTGTGTT+TGG - chr2.2:23311300-23311319 None:intergenic 50.0%
CTTCCCTTGCAACTTTCACC+AGG - chr2.2:23313471-23313490 None:intergenic 50.0%
GAAAGTTGCAAGGGAAGAGG+TGG + chr2.2:23313474-23313493 MS.gene54146:CDS 50.0%
GAACAGAAATCTCCGACACC+CGG - chr2.2:23310455-23310474 None:intergenic 50.0%
GACACTATCATGGACGAGGT+TGG + chr2.2:23313764-23313783 MS.gene54146:CDS 50.0%
GACTGTTACGGAGGAAGTAG+AGG + chr2.2:23310482-23310501 MS.gene54146:CDS 50.0%
GGTGAAAGTTGCAAGGGAAG+AGG + chr2.2:23313471-23313490 MS.gene54146:CDS 50.0%
GTGGAATCAGGTGATCATCC+AGG + chr2.2:23313795-23313814 MS.gene54146:CDS 50.0%
TCATCAAGCCTGTCGTTGCT+AGG - chr2.2:23313897-23313916 None:intergenic 50.0%
TCCGTTTACGACTGTTACGG+AGG + chr2.2:23310473-23310492 MS.gene54146:CDS 50.0%
TGGGCCTTTGATGTTGTGGA+TGG + chr2.2:23313423-23313442 MS.gene54146:CDS 50.0%
TGGGTGGAATTTCCATCTCC+TGG + chr2.2:23313450-23313469 MS.gene54146:CDS 50.0%
TGGGTTGTGTATGGTTTCGC+TGG + chr2.2:23313528-23313547 MS.gene54146:CDS 50.0%
TGGTCAGTAGCCGATGTATC+CGG + chr2.2:23313147-23313166 MS.gene54146:CDS 50.0%
TGGTTTCGCTGGAATGGAAG+TGG + chr2.2:23313539-23313558 MS.gene54146:CDS 50.0%
TGTCCCTCCAATCAGCAGAT+TGG - chr2.2:23314747-23314766 None:intergenic 50.0%
TTGTTATCAACGGGGACACG+TGG - chr2.2:23313096-23313115 None:intergenic 50.0%
! GTAGAGGCGTATAGAGAGAG+AGG + chr2.2:23310498-23310517 MS.gene54146:intron 50.0%
! TTTTTCCCTGGGCCACTGTT+AGG - chr2.2:23313506-23313525 None:intergenic 50.0%
!! AACTGGTTTGGAACCGGTTC+GGG - chr2.2:23310549-23310568 None:intergenic 50.0%
!! ATGAACTACCACCGGTTTGC+AGG + chr2.2:23314806-23314825 MS.gene54146:CDS 50.0%
!! GAGTCAAAGGTTGGTGTCCA+AGG + chr2.2:23314364-23314383 MS.gene54146:CDS 50.0%
!!! CCACTTGGGCCCATGTTTTT+TGG - chr2.2:23313590-23313609 None:intergenic 50.0%
!!! TGTTTTTGGTGGCTGTGGAG+TGG + chr2.2:23313380-23313399 MS.gene54146:CDS 50.0%
ACCAGCAAGATGCCAAGGTG+AGG + chr2.2:23314653-23314672 MS.gene54146:CDS 55.0%
ACCCTCTTGTGTCTCTGACC+CGG + chr2.2:23311339-23311358 MS.gene54146:intron 55.0%
ATCGTGACACCAACACGTGG+CGG - chr2.2:23313183-23313202 None:intergenic 55.0%
ATCTCCGACACCCGGAATGT+AGG - chr2.2:23310447-23310466 None:intergenic 55.0%
CCCATGTGACCTTGGTCACT+AGG - chr2.2:23313702-23313721 None:intergenic 55.0%
CCCTAGTGACCAAGGTCACA+TGG + chr2.2:23313698-23313717 MS.gene54146:CDS 55.0%
CGGAGACACTATCATGGACG+AGG + chr2.2:23313760-23313779 MS.gene54146:CDS 55.0%
GAAAACACACTACGGGCCGT+TGG - chr2.2:23313630-23313649 None:intergenic 55.0%
GACGAGGTTGGACGATAAGG+TGG + chr2.2:23313776-23313795 MS.gene54146:CDS 55.0%
GAGTGGTAGCTACGGTTAGG+AGG - chr2.2:23313333-23313352 None:intergenic 55.0%
GCAACTCACCTAGCAACGAC+AGG + chr2.2:23313886-23313905 MS.gene54146:CDS 55.0%
GCAAGATGCCAAGGTGAGGA+AGG + chr2.2:23314657-23314676 MS.gene54146:CDS 55.0%
GGGCCCAAGTGGAAACAAGT+GGG + chr2.2:23313598-23313617 MS.gene54146:CDS 55.0%
GGTCAGTAGCCGATGTATCC+GGG + chr2.2:23313148-23313167 MS.gene54146:CDS 55.0%
TCCGGGTCAGAGACACAAGA+GGG - chr2.2:23311343-23311362 None:intergenic 55.0%
TCCTCACCTTGGCATCTTGC+TGG - chr2.2:23314657-23314676 None:intergenic 55.0%
TGGGCCCAAGTGGAAACAAG+TGG + chr2.2:23313597-23313616 MS.gene54146:CDS 55.0%
TGTTGTGGATGGCAAGTGGG+TGG + chr2.2:23313434-23313453 MS.gene54146:CDS 55.0%
TTCCGGGTCAGAGACACAAG+AGG - chr2.2:23311344-23311363 None:intergenic 55.0%
!! GTTTGGAACCGGTTCGGGTT+AGG - chr2.2:23310544-23310563 None:intergenic 55.0%
AACATACCGCCGCCACGTGT+TGG + chr2.2:23313171-23313190 MS.gene54146:CDS 60.0%
ACGTCGGTCATCGGCAGTCA+TGG - chr2.2:23313355-23313374 None:intergenic 60.0%
GACCAAGGTCACATGGGTGC+TGG + chr2.2:23313705-23313724 MS.gene54146:CDS 60.0%
GACCAGCACCCATGTGACCT+TGG - chr2.2:23313710-23313729 None:intergenic 60.0%
GCCATCGTGACACCAACACG+TGG - chr2.2:23313186-23313205 None:intergenic 60.0%
GGTCATCGGCAGTCATGGAG+TGG - chr2.2:23313350-23313369 None:intergenic 60.0%
GTGATCATCCAGGGCCACGT+GGG + chr2.2:23313805-23313824 MS.gene54146:CDS 60.0%
TTGCAAGGGAAGAGGTGGGC+CGG + chr2.2:23313479-23313498 MS.gene54146:CDS 60.0%
! GGTGTCACGATGGCTGCAGT+TGG + chr2.2:23313192-23313211 MS.gene54146:CDS 60.0%
! TTTGGTGGCTGTGGAGTGGC+AGG + chr2.2:23313384-23313403 MS.gene54146:CDS 60.0%
!! GCCACGTGTTGGTGTCACGA+TGG + chr2.2:23313182-23313201 MS.gene54146:CDS 60.0%
ACGTGGCGGCGGTATGTTCC+CGG - chr2.2:23313169-23313188 None:intergenic 65.0%
ATCATCCAGGGCCACGTGGG+TGG + chr2.2:23313808-23313827 MS.gene54146:CDS 65.0%
CGTGGGTGGTGCGCATTTGC+CGG + chr2.2:23313822-23313841 MS.gene54146:CDS 65.0%
GCAAATGCGCACCACCCACG+TGG - chr2.2:23313822-23313841 None:intergenic 65.0%
GCTAGCCGAGGCAGCCAAGA+GGG + chr2.2:23313846-23313865 MS.gene54146:CDS 65.0%
GGTGATCATCCAGGGCCACG+TGG + chr2.2:23313804-23313823 MS.gene54146:CDS 65.0%
GTGACACCAACACGTGGCGG+CGG - chr2.2:23313180-23313199 None:intergenic 65.0%
GTGGCTGTGGAGTGGCAGGA+AGG + chr2.2:23313388-23313407 MS.gene54146:CDS 65.0%
TGCAAGGGAAGAGGTGGGCC+GGG + chr2.2:23313480-23313499 MS.gene54146:CDS 65.0%
TGCTAGCCGAGGCAGCCAAG+AGG + chr2.2:23313845-23313864 MS.gene54146:CDS 65.0%
TTGGCTGCCTCGGCTAGCAC+CGG - chr2.2:23313844-23313863 None:intergenic 65.0%
! GCATTTGCCGGTGCTAGCCG+AGG + chr2.2:23313834-23313853 MS.gene54146:CDS 65.0%
AGGTGGGCCGGGCCTAACAG+TGG + chr2.2:23313491-23313510 MS.gene54146:CDS 70.0%
CCCTGGGCCACTGTTAGGCC+CGG - chr2.2:23313501-23313520 None:intergenic 70.0%
CCGGGCCTAACAGTGGCCCA+GGG + chr2.2:23313498-23313517 MS.gene54146:CDS 70.0%
GCCGGGCCTAACAGTGGCCC+AGG + chr2.2:23313497-23313516 MS.gene54146:CDS 75.0%
! GCGCACCACCCACGTGGCCC+TGG - chr2.2:23313816-23313835 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 23310410 23314849 23310410 ID=MS.gene54146
chr2.2 mRNA 23310410 23314849 23310410 ID=MS.gene54146.t1;Parent=MS.gene54146
chr2.2 exon 23310410 23310505 23310410 ID=MS.gene54146.t1.exon1;Parent=MS.gene54146.t1
chr2.2 CDS 23310410 23310505 23310410 ID=cds.MS.gene54146.t1;Parent=MS.gene54146.t1
chr2.2 exon 23313000 23313942 23313000 ID=MS.gene54146.t1.exon2;Parent=MS.gene54146.t1
chr2.2 CDS 23313000 23313942 23313000 ID=cds.MS.gene54146.t1;Parent=MS.gene54146.t1
chr2.2 exon 23314317 23314849 23314317 ID=MS.gene54146.t1.exon3;Parent=MS.gene54146.t1
chr2.2 CDS 23314317 23314849 23314317 ID=cds.MS.gene54146.t1;Parent=MS.gene54146.t1
Gene Sequence

>MS.gene54146

ATGATCGTCGTTGATGATGTCGTGAGTGTGATTTCCTACATTCCGGGTGTCGGAGATTTCTGTTCCGTTTACGACTGTTACGGAGGAAGTAGAGGCGTATAGAGAGAGAGGTTGCTGCAAGTTGTTCTAAACCTAACCCGAACCGGTTCCAAACCAGTTTTGTGAAATGGTTTCAGGTATACCCGTGTTCTAACTTTTATTGAAAACCACAGTTATTTATTAAAAAATTGCATATTTAAAATAAAATACAAAAGTTCCAACATAAACTTACTGCTTTAAACCTCTTAACATTTAGAAAAATCCTTTTATTAATTGGGTTAGGTTTCTTAAATATGGAATGGTTTGGTTATTGATTTGGTTAGGATTTTTTAACCAAAATTAATTCTACAAAATCAATTCATTCAGGGGCCGTTTGTTATAGTTTTTAAAAAAAATGGATTTTTGTAGTGTAATATGTTTTTGTTATAATTTTTTTAACAAAGAAATTTTTATGGAAAGTTTCAAATGAAAAATTCGTTGGAATAGTTCATCTTAAAATGTCATATTAAGTATTTCATCATTTTGTTGTAATTTTTTTTGGATGCTAAAATTTTGAAAAAATCTCTAAAAGAAAACTATTTCAAATGGCTTTTCATAAAAATCATTTTTGAAAGATGAAATTTTCAAAAAATATGTGATATTTATTACGTAAAATCTAGAACAATGATTATGTAAGTTAGAGAACGTCAAAATCTCTTTTTTAACTTATAACAAATGAGATTGATATAACTTCTACTATTTTCGAATAAATTTTCAAAAAAATCCATTTTTAGAAATACAAAGAAAAATCCATTTTTTTTAAATCTAAAACAAACGGGCCCTCAAAATCAATTTTCACTACCGCTAAACCAAACACACACGTCACGAAGAGTTGGTTGATTTGGGTTTTGACCCTCTTGTGTCTCTGACCCGGAAACATTTGTTCTATAATTTAATAATATTTAATATTGATTGTTATTTCTTTTTCTTTCTTTCATAAATACCATTTGTGATTTATATTTTTTTTGACAAAAATAAACTATATACATTCATTCAGGAGAAAAATATCTTTTTATTATATGATTTGAATTGTATTAGTATAAGGATTAGTATGTTTTTTTAATAGTACTTGATTAGACCTTACTTCACCTTTGGTCAGAAAACATTGAAATCACAACCGAGTATTATTTATATATCGATGATGATAGGATGATATCAAAACGAAATGCTGCAATCTAAGCATTTATATACAACAACATACAACAAATAAAAAATACTCCATCCGTTTCAAAATGAGTGTCGCTTTAGCCAAAAAAAATTGTTTCAAAATGAATGTCGCTTTCAGTTTCCAATGCAATAATAACTTTTTCTTTTAATTGTACCCTCCAATTAATACTCTGCACATTACTTCCAAAGTATTACTTTTAAAACTAACAAATAGTTAATAAGGATAATTTGGTAAAATAATCATTCTCTTTCTTTTAATCATTGCATTTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTAAAACGGAGGGAATACTAAACAATAATGAGAGTGGTTGTAAATGTGGTGAATTGGGTATAAATGGAATTTTACTCAACATTTTACTCCCTCCGGTCCTATTTATAAGAAAAAATTGACTTTTTTGATTCATTGTAGAAATAATGTATTTGTATTTGGTCTATATTCTATAGCAAGTACATTAATTACTCAATGAATCTAAAAAGTCAACTTTTTCTTATAAATAGGACCGGATGGAGTAGCTTATAACATAAACTTGTGTATACTCTATTTTTATTTGGGTTTTTCTATCATGTGCAAATTTGCACATGATAAGAAGTTTAAAGTAGTAACTTTGACTTGGTACTTGTATTTTTTATATTAAATATGTAACTTTTAATAAATAATTGTTGGTTTTCAATGAAAAGTTACTACTTTTAGTTGCCTTAACATGTGCAATATTGCACATGTTAGACAAACCCTTTTTATTTTTATCATAATAGATAAAATAAAAAATAAAGTCAAATTGTTTTCTTATAAATTATAAGTTGTTTTCATAAACTATATCCTGATGAGCTTATGGAAATAAGCTGAAAACAACTTATGAAAATGTCACAAGTTGTGTTCATAAGTTTTCCCAAATAGTCTCACAAGTACTTATATCCATAAATAAGCTCATATAAGCTAATCCAAACATAAACTTTTGATTGTCGTCAAAGTTTGAACAATTTTCAAACATCGTTATCAGTAGACCACACAAGATACTTCACTATAGCAATTGCTTGTATGTTAGCTAAAGAAACTAATCCCTAAAAAATTGAAATCTCAACTTTAATTTCAAATCCTTTGATTATATTGAAAAATTATGCGTTATCTTCTACCACCACCTTGAATAGTTTCTGAGAATTTTAATATACTAGAGAATATTCTTAAAATTCTCTTAGGCCCTACAAATACTATTTATGACTCTGAAAAATTGAAATAATCTTATTGTGCTAAAAGTGATTCCTGGTACATTTTTTAAAATGAATTATTCAGAATATTTTAATTATTGTTTCAGCTTGATCAAAGAGGAATCTTGCAAGGAGCAAGAAGTTCACATGCTATTGCTGTAGTAGGACAGAAGGTTTATGCATTTGGCGGTGAGTTTGAGCCACGTGTCCCCGTTGATAACAAGTTACATGTGTACGACCTAGATACCTTGACATGGTCAGTAGCCGATGTATCCGGGAACATACCGCCGCCACGTGTTGGTGTCACGATGGCTGCAGTTGGAGAAACCATCTATGTATTTGGTGGAAGAGATGCTGAACACAATGAACTCAATGAGCTCTATTCTTTTGACACTAAAACCAACAATTGGGCCTTGATTTCAAGTGGAGATGTTGGGCCTCCTAACCGTAGCTACCACTCCATGACTGCCGATGACCGACGTGTGTATGTTTTTGGTGGCTGTGGAGTGGCAGGAAGGCTCAATGATTTATGGGCCTTTGATGTTGTGGATGGCAAGTGGGTGGAATTTCCATCTCCTGGTGAAAGTTGCAAGGGAAGAGGTGGGCCGGGCCTAACAGTGGCCCAGGGAAAAATATGGGTTGTGTATGGTTTCGCTGGAATGGAAGTGGATGACGTGCATTTCTTCGATCTGGCCCAAAAAACATGGGCCCAAGTGGAAACAAGTGGGCTTAAACCAACGGCCCGTAGTGTGTTTTCAACTTGTTTAATTGGGAAACACATAATTGTATATGGTGGGGAAATAGACCCTAGTGACCAAGGTCACATGGGTGCTGGTCAATTTTCAGGTGAGCTTTATGCATTAGACACGGAGACACTATCATGGACGAGGTTGGACGATAAGGTGGAATCAGGTGATCATCCAGGGCCACGTGGGTGGTGCGCATTTGCCGGTGCTAGCCGAGGCAGCCAAGAGGGATTATTAGTGTATGGTGGCAACTCACCTAGCAACGACAGGCTTGATGACATTTTCTTCCTTGCTCTTGCTCAAAGTTAGTTGGTGAATAAATATATTCTGTGTAGTTGCATATGTGTGATCAATTCTAGGTGCATATGTGTGATAAGAGATCAGTATGTCATGTGAACTTAGGTATGTTTATGTGTGAATGTACTTGTGTGCTAGAATAAAATGTCAAAAACAAGAAGTGTGTGATGATTGTTGAATAAATGCGTTTTTTTTTTTTTTTGTTGAAAGAAACAAACTTATAACATTTCATTTATCAAAGCGTGTTTAATACAACCTGGTATTTCAAATAGAACTTGGAAATTAGTTGACAATGAGGCCGCCTTAGCTTAAATATATGTTATTTAAATTATACCGTACTTGTATTTCATAACAAGTATTAAAATTAAAATTATGTAGCAGGAAATGCTCAAATTTATGACAGAAAAAGTGAACTAAAGGAATTTGATGAGTCAAAGGTTGGTGTCCAAGGACTCATAGAAAATGGTGTAACAAAAGTTCCACGCATGTTCTATTGTGAACAATCTAATATCAATCATGGTTCAGTCAATGAATCAAATTCAAAGCTTAGTGTCCCTACAATTGACTTAACAGGAATCCATGATGATCCTGTTTTGAGAGATGAAGTTGTAAGAAAAGTTCAAAATGCAAGTGAGAAATGGGGATTCTTTCAAGTAATAAATCATGGAATTCCAGTTCATGTTTTGGATGAGATGATCAAAGGGACACGTAGATTTCACCAGCAAGATGCCAAGGTGAGGAAGGAGTACTATACCCGTGATCTCACCAAAAAAGTTGTTTATCTTTCCAATTTTACTCTTTATCAAGACCAATCTGCTGATTGGAGGGACACACTTGCATTTTTCTGGGCTCCCGATCCTCCTAAAGCTGATGAACTACCACCGGTTTGCAGGTTTGTCTTAATACTACTTTAA
Protein sequence

>MS.gene54146.t1

MIVVDDVVSVISYIPGVGDFCSVYDCYGGSRGLDQRGILQGARSSHAIAVVGQKVYAFGGEFEPRVPVDNKLHVYDLDTLTWSVADVSGNIPPPRVGVTMAAVGETIYVFGGRDAEHNELNELYSFDTKTNNWALISSGDVGPPNRSYHSMTADDRRVYVFGGCGVAGRLNDLWAFDVVDGKWVEFPSPGESCKGRGGPGLTVAQGKIWVVYGFAGMEVDDVHFFDLAQKTWAQVETSGLKPTARSVFSTCLIGKHIIVYGGEIDPSDQGHMGAGQFSGELYALDTETLSWTRLDDKVESGDHPGPRGWCAFAGASRGSQEGLLVYGGNSPSNDRLDDIFFLALAQRNAQIYDRKSELKEFDESKVGVQGLIENGVTKVPRMFYCEQSNINHGSVNESNSKLSVPTIDLTGIHDDPVLRDEVVRKVQNASEKWGFFQVINHGIPVHVLDEMIKGTRRFHQQDAKVRKEYYTRDLTKKVVYLSNFTLYQDQSADWRDTLAFFWAPDPPKADELPPVCRFVLILL