AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene039084

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039084.t1 MTR_2g069030 97.452 314 8 0 33 346 11 324 0.0 636
MS.gene039084.t1 MTR_2g069010 93.491 169 11 0 348 516 13 181 1.13e-111 337
MS.gene039084.t1 MTR_2g069020 88.757 169 19 0 348 516 11 179 1.47e-106 323
MS.gene039084.t1 MTR_2g069020 88.757 169 19 0 348 516 11 179 8.47e-106 322
MS.gene039084.t1 MTR_2g068950 84.000 175 28 0 342 516 1 175 5.73e-103 314
MS.gene039084.t1 MTR_2g068960 81.714 175 32 0 342 516 1 175 7.19e-101 308
MS.gene039084.t1 MTR_2g069060 66.471 170 37 1 352 521 17 166 8.46e-72 233
MS.gene039084.t1 MTR_2g069070 66.467 167 36 1 352 518 17 163 3.13e-71 226
MS.gene039084.t1 MTR_2g069060 72.028 143 40 0 379 521 2 144 1.57e-69 223
MS.gene039084.t1 MTR_7g056347 57.647 170 70 1 352 521 17 184 2.84e-64 214
MS.gene039084.t1 MTR_1g093120 53.846 182 82 1 342 521 3 184 2.91e-63 211
MS.gene039084.t1 MTR_8g062600 57.059 170 71 1 352 521 17 184 1.06e-62 209
MS.gene039084.t1 MTR_4g024660 56.471 170 72 1 352 521 17 184 1.07e-62 209
MS.gene039084.t1 MTR_8g006930 53.371 178 81 1 344 521 9 184 1.57e-61 206
MS.gene039084.t1 MTR_7g078010 55.882 170 73 1 352 521 17 184 2.98e-61 203
MS.gene039084.t1 MTR_1g093110 53.333 180 80 2 346 521 8 187 9.35e-61 204
MS.gene039084.t1 MTR_7g078010 55.882 170 73 1 352 521 17 184 2.77e-60 203
MS.gene039084.t1 MTR_4g119410 52.809 178 82 1 344 521 9 184 3.02e-60 203
MS.gene039084.t1 MTR_1g093140 53.672 177 75 2 352 521 14 190 3.32e-59 201
MS.gene039084.t1 MTR_7g056393 55.172 174 76 1 344 517 9 180 1.04e-58 199
MS.gene039084.t1 MTR_8g063070 54.118 170 76 1 352 521 17 184 1.27e-58 199
MS.gene039084.t1 MTR_8g469400 55.030 169 62 2 352 520 17 171 3.64e-55 189
MS.gene039084.t1 MTR_8g009080 51.765 170 81 1 352 521 43 211 1.16e-51 179
MS.gene039084.t1 MTR_8g009080 51.765 170 81 1 352 521 43 211 2.10e-51 179
MS.gene039084.t1 MTR_8g009080 51.765 170 81 1 352 521 43 211 6.32e-51 179
MS.gene039084.t1 MTR_7g056370 51.250 160 76 1 362 521 6 163 1.70e-50 172
MS.gene039084.t1 MTR_2g069210 47.929 169 87 1 353 521 14 181 1.12e-49 175
MS.gene039084.t1 MTR_4g099380 48.171 164 80 1 354 517 124 282 1.14e-49 172
MS.gene039084.t1 MTR_8g041600 45.455 176 93 2 344 517 9 183 1.90e-48 170
MS.gene039084.t1 MTR_8g041600 44.444 180 97 2 344 521 9 187 1.20e-47 170
MS.gene039084.t1 MTR_2g069190 46.746 169 89 1 353 521 18 185 3.16e-47 168
MS.gene039084.t1 MTR_2g069090 46.154 169 90 1 353 521 18 185 6.32e-47 167
MS.gene039084.t1 MTR_8g041620 46.591 176 91 2 344 517 9 183 1.28e-46 167
MS.gene039084.t1 MTR_1g043810 47.647 170 85 3 353 521 5 171 1.14e-44 160
MS.gene039084.t1 MTR_1g043810 47.647 170 85 3 353 521 5 171 2.44e-44 160
MS.gene039084.t1 MTR_1g043760 45.562 169 89 2 353 521 5 170 3.38e-44 160
MS.gene039084.t1 MTR_1g043770 44.970 169 89 2 353 521 5 169 3.55e-44 158
MS.gene039084.t1 MTR_1g043775 45.882 170 88 3 353 521 5 171 6.61e-44 158
MS.gene039084.t1 MTR_1g043770 44.970 169 89 2 353 521 5 169 7.90e-44 159
MS.gene039084.t1 MTR_1g043775 45.882 170 88 3 353 521 5 171 2.23e-43 157
MS.gene039084.t1 MTR_2g069300 43.636 165 92 1 353 517 4 167 5.07e-43 157
MS.gene039084.t1 MTR_8g028435 44.311 167 88 3 356 521 16 178 2.37e-42 155
MS.gene039084.t1 MTR_8g009090 44.910 167 87 3 356 521 16 178 9.10e-42 153
MS.gene039084.t1 MTR_0032s0040 42.135 178 92 4 348 517 8 182 1.25e-41 153
MS.gene039084.t1 MTR_1g044105 43.452 168 90 3 353 516 5 171 1.42e-41 147
MS.gene039084.t1 MTR_7g029655 43.787 169 89 2 352 517 12 177 2.70e-41 152
MS.gene039084.t1 MTR_8g008930 46.341 164 82 4 356 517 16 175 3.67e-41 152
MS.gene039084.t1 MTR_8g009160 41.317 167 93 2 356 521 16 178 2.96e-40 149
MS.gene039084.t1 MTR_8g009150 40.476 168 94 3 356 521 16 179 1.01e-39 147
MS.gene039084.t1 MTR_1g070185 43.860 171 91 3 352 521 18 184 1.46e-39 147
MS.gene039084.t1 MTR_8g009110 42.262 168 91 3 356 521 16 179 4.94e-39 146
MS.gene039084.t1 MTR_8g009120 41.104 163 90 3 356 516 16 174 2.01e-38 144
MS.gene039084.t1 MTR_4g117880 41.667 168 92 4 356 521 16 179 3.07e-37 141
MS.gene039084.t1 MTR_7g105070 38.824 170 102 2 352 521 8 175 4.53e-37 140
MS.gene039084.t1 MTR_8g009170 41.667 168 92 4 356 521 16 179 3.70e-36 136
MS.gene039084.t1 MTR_8g009170 41.667 168 92 4 356 521 16 179 1.05e-35 137
MS.gene039084.t1 MTR_2g069130 69.474 95 23 2 408 500 12 102 9.33e-35 127
MS.gene039084.t1 MTR_7g056353 41.420 169 69 3 352 520 19 157 3.69e-34 135
MS.gene039084.t1 MTR_1g032250 37.952 166 100 1 352 517 21 183 1.06e-33 131
MS.gene039084.t1 MTR_1g032220 37.952 166 100 1 352 517 21 183 6.45e-33 129
MS.gene039084.t1 MTR_1g032140 36.145 166 103 1 352 517 14 176 3.10e-32 127
MS.gene039084.t1 MTR_4g109680 29.032 341 214 12 34 361 16 341 1.53e-28 120
MS.gene039084.t1 MTR_1g084120 25.352 355 225 11 43 382 28 357 6.89e-22 99.8
MS.gene039084.t1 MTR_1g084120 28.139 231 148 6 82 307 15 232 2.26e-17 85.9
MS.gene039084.t1 MTR_1g084120 32.065 184 117 5 37 216 122 301 1.27e-16 83.6
MS.gene039084.t1 MTR_1g084120 27.273 154 104 4 36 188 175 321 2.88e-11 66.6
MS.gene039084.t1 MTR_4g132120 28.163 245 164 4 53 294 292 527 3.08e-19 92.0
MS.gene039084.t1 MTR_4g119100 26.860 242 148 9 46 269 157 387 9.49e-18 87.0
MS.gene039084.t1 MTR_4g119100 25.103 243 155 8 81 310 82 310 6.41e-15 78.2
MS.gene039084.t1 MTR_4g119100 24.569 232 160 7 43 262 96 324 3.85e-14 75.9
MS.gene039084.t1 MTR_4g119100 26.860 242 148 9 46 269 158 388 1.11e-17 87.0
MS.gene039084.t1 MTR_4g119100 25.103 243 155 8 81 310 83 311 8.00e-15 77.8
MS.gene039084.t1 MTR_4g119100 24.569 232 160 7 43 262 97 325 5.06e-14 75.5
MS.gene039084.t1 MTR_4g119100 26.860 242 148 9 46 269 158 388 1.12e-17 87.0
MS.gene039084.t1 MTR_4g119100 25.103 243 155 8 81 310 83 311 7.58e-15 77.8
MS.gene039084.t1 MTR_4g119100 24.569 232 160 7 43 262 97 325 5.01e-14 75.5
MS.gene039084.t1 MTR_1g107265 28.014 282 171 10 43 295 69 347 1.25e-16 83.6
MS.gene039084.t1 MTR_1g107265 28.014 282 171 10 43 295 69 347 1.95e-16 82.8
MS.gene039084.t1 MTR_2g019860 27.136 199 124 6 46 233 150 338 8.75e-16 80.9
MS.gene039084.t1 MTR_2g019860 26.293 232 156 7 43 262 89 317 4.97e-15 78.6
MS.gene039084.t1 MTR_2g019860 28.866 194 131 5 33 221 188 379 4.96e-14 75.5
MS.gene039084.t1 MTR_1g032230 29.286 140 77 1 352 491 15 132 1.01e-15 77.8
MS.gene039084.t1 MTR_1g043840 46.053 76 40 1 412 487 254 328 1.01e-15 79.0
MS.gene039084.t1 MTR_7g113200 32.164 171 109 5 46 213 245 411 2.32e-15 79.3
MS.gene039084.t1 MTR_7g113200 25.097 259 175 5 42 292 186 433 3.52e-14 75.9
MS.gene039084.t1 MTR_7g113200 23.616 271 172 13 74 332 170 417 2.60e-11 66.6
MS.gene039084.t1 MTR_7g113200 29.442 197 130 6 46 237 245 437 3.40e-15 78.6
MS.gene039084.t1 MTR_7g113200 25.097 259 175 5 42 292 186 433 3.57e-14 75.1
MS.gene039084.t1 MTR_7g113200 23.913 276 165 14 74 332 170 417 4.17e-11 65.5
MS.gene039084.t1 MTR_1g492850 27.863 262 158 10 83 329 8 253 4.89e-15 78.2
MS.gene039084.t1 MTR_5g065010 30.714 140 93 4 367 504 3 140 5.37e-15 76.6
MS.gene039084.t1 MTR_1g492850 27.863 262 158 10 83 329 8 253 6.91e-15 77.4
MS.gene039084.t1 MTR_1g090740 28.571 175 118 5 42 213 88 258 1.91e-14 76.3
MS.gene039084.t1 MTR_1g090740 24.681 235 161 4 42 262 27 259 4.42e-11 65.5
MS.gene039084.t1 MTR_1g062110 32.000 150 94 3 367 513 26 170 2.51e-14 74.3
MS.gene039084.t1 MTR_1g062110 32.000 150 94 3 367 513 26 170 4.10e-14 74.3
MS.gene039084.t1 MTR_8g024120 32.353 102 67 1 403 504 41 140 2.84e-13 71.6
MS.gene039084.t1 MTR_7g068650 30.201 149 97 4 363 507 10 155 5.29e-13 70.9
MS.gene039084.t1 MTR_4g007980 28.063 253 145 12 42 263 120 366 1.19e-12 70.5
MS.gene039084.t1 MTR_4g015790 26.857 175 110 4 363 520 9 182 2.37e-12 68.9
MS.gene039084.t1 MTR_3g043900 29.870 154 98 6 367 517 17 163 5.43e-12 67.8
MS.gene039084.t1 MTR_3g091350 27.451 153 95 5 356 504 21 161 5.61e-11 64.7
MS.gene039084.t1 MTR_7g102720 24.427 131 94 1 387 517 20 145 7.66e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039084.t1 AT3G07720 70.645 310 91 0 33 342 13 322 1.68e-165 472
MS.gene039084.t1 AT5G48180 54.459 314 141 2 35 348 13 324 2.48e-120 357
MS.gene039084.t1 AT3G16400 50.160 313 154 2 33 344 156 467 1.23e-106 327
MS.gene039084.t1 AT3G16400 50.160 313 154 2 33 344 156 467 1.23e-106 327
MS.gene039084.t1 AT3G16410 49.201 313 157 2 33 344 305 616 5.40e-104 325
MS.gene039084.t1 AT2G33070 50.160 313 154 2 33 344 159 470 1.26e-103 319
MS.gene039084.t1 AT2G33070 50.160 313 154 2 33 344 157 468 1.41e-103 319
MS.gene039084.t1 AT2G33070 50.160 313 154 2 33 344 157 468 1.41e-103 319
MS.gene039084.t1 AT3G16390 49.201 313 154 4 33 344 156 464 7.82e-100 309
MS.gene039084.t1 AT3G16390 49.201 313 154 4 33 344 156 464 7.82e-100 309
MS.gene039084.t1 AT1G54040 45.092 326 157 6 37 344 11 332 1.28e-90 281
MS.gene039084.t1 AT1G54040 45.092 326 157 6 37 344 17 338 2.27e-90 280
MS.gene039084.t1 AT1G54040 45.038 262 123 5 100 344 1 258 2.27e-71 228
MS.gene039084.t1 AT2G25450 52.023 173 81 1 349 521 2 172 4.30e-55 189
MS.gene039084.t1 AT1G06620 48.521 169 86 1 353 521 12 179 1.91e-51 177
MS.gene039084.t1 AT2G30830 48.538 171 84 2 352 521 5 172 5.44e-51 178
MS.gene039084.t1 AT1G06620 48.521 169 86 1 353 521 12 179 2.03e-50 177
MS.gene039084.t1 AT2G30840 48.256 172 87 2 352 521 5 176 2.36e-50 175
MS.gene039084.t1 AT2G30840 48.256 172 87 2 352 521 5 176 1.18e-49 174
MS.gene039084.t1 AT2G30840 48.256 172 87 2 352 521 5 176 1.41e-49 174
MS.gene039084.t1 AT1G06650 43.646 181 85 3 351 521 9 182 9.95e-48 168
MS.gene039084.t1 AT1G06650 43.646 181 85 3 351 521 9 182 4.40e-47 168
MS.gene039084.t1 AT1G03410 45.029 171 92 2 353 521 5 175 4.42e-47 168
MS.gene039084.t1 AT1G06640 42.781 187 90 3 345 521 3 182 6.60e-47 165
MS.gene039084.t1 AT1G04350 45.029 171 90 2 352 521 6 173 7.46e-47 167
MS.gene039084.t1 AT5G59540 44.318 176 96 2 344 517 1 176 8.32e-47 165
MS.gene039084.t1 AT1G03410 45.029 171 92 2 353 521 42 212 1.03e-46 168
MS.gene039084.t1 AT1G06640 42.781 187 90 3 345 521 3 182 2.51e-46 165
MS.gene039084.t1 AT5G59540 44.318 176 96 2 344 517 1 176 6.26e-46 165
MS.gene039084.t1 AT1G06640 42.781 187 90 3 345 521 3 182 7.44e-46 165
MS.gene039084.t1 AT3G61400 43.678 174 92 2 353 521 10 182 7.25e-45 160
MS.gene039084.t1 AT3G61400 43.678 174 92 2 353 521 10 182 3.31e-44 160
MS.gene039084.t1 AT5G59530 45.506 178 92 4 347 521 3 178 5.50e-44 159
MS.gene039084.t1 AT1G03400 41.420 169 91 1 353 521 5 165 7.02e-44 159
MS.gene039084.t1 AT1G03400 41.420 169 91 1 353 521 5 165 2.30e-43 158
MS.gene039084.t1 AT1G06645 45.399 163 82 3 349 506 20 180 8.35e-42 154
MS.gene039084.t1 AT5G43450 39.773 176 103 2 347 521 3 176 1.80e-38 142
MS.gene039084.t1 AT5G43450 39.773 176 103 2 347 521 3 176 1.09e-37 142
MS.gene039084.t1 AT5G43440 38.122 181 107 4 344 521 1 179 4.52e-37 139
MS.gene039084.t1 AT5G43440 38.122 181 107 4 344 521 1 179 2.46e-36 139
MS.gene039084.t1 AT1G04380 35.955 178 95 3 344 521 1 159 1.61e-33 128
MS.gene039084.t1 AT1G04380 35.955 178 95 3 344 521 1 159 9.15e-33 128
MS.gene039084.t1 AT1G18610 28.696 345 216 8 32 359 14 345 2.29e-31 128
MS.gene039084.t1 AT1G18610 28.696 345 216 8 32 359 14 345 2.29e-31 128
MS.gene039084.t1 AT1G74150 26.230 366 237 8 41 396 20 362 2.64e-28 119
MS.gene039084.t1 AT1G74150 27.509 269 169 7 86 344 13 265 1.19e-15 80.1
MS.gene039084.t1 AT1G74150 26.222 225 155 6 37 252 69 291 3.74e-14 75.5
MS.gene039084.t1 AT1G74150 26.431 367 236 9 41 396 20 363 2.16e-27 116
MS.gene039084.t1 AT1G74150 27.509 269 169 7 86 344 13 265 9.27e-16 80.5
MS.gene039084.t1 AT1G74150 26.222 225 155 6 37 252 69 291 3.03e-14 75.9
MS.gene039084.t1 AT1G74150 26.431 367 236 9 41 396 20 363 2.38e-27 116
MS.gene039084.t1 AT1G74150 27.509 269 169 7 86 344 13 265 9.81e-16 80.5
MS.gene039084.t1 AT1G74150 26.222 225 155 6 37 252 69 291 3.24e-14 75.9
MS.gene039084.t1 AT1G74150 25.610 328 213 7 78 396 42 347 1.68e-22 101
MS.gene039084.t1 AT1G74150 26.222 225 155 6 37 252 53 275 1.88e-14 76.3
MS.gene039084.t1 AT5G18590 28.390 236 152 7 46 269 140 370 5.52e-19 90.9
MS.gene039084.t1 AT5G18590 25.541 231 159 5 43 262 79 307 4.69e-15 78.6
MS.gene039084.t1 AT5G18590 25.087 287 177 10 38 310 32 294 7.45e-15 78.2
MS.gene039084.t1 AT5G18590 28.390 236 152 7 46 269 140 370 5.52e-19 90.9
MS.gene039084.t1 AT5G18590 25.541 231 159 5 43 262 79 307 4.69e-15 78.6
MS.gene039084.t1 AT5G18590 25.087 287 177 10 38 310 32 294 7.45e-15 78.2
MS.gene039084.t1 AT3G13610 31.818 154 94 5 367 517 26 171 2.28e-18 87.4
MS.gene039084.t1 AT3G05420 23.611 432 283 12 19 427 164 571 4.03e-17 85.1
MS.gene039084.t1 AT3G05420 23.611 432 283 12 19 427 163 570 4.14e-17 85.1
MS.gene039084.t1 AT4G04670 34.043 141 90 2 43 183 376 513 5.15e-16 82.0
MS.gene039084.t1 AT4G04670 26.222 225 159 4 41 262 323 543 8.32e-16 81.3
MS.gene039084.t1 AT4G04670 28.000 175 121 3 91 262 321 493 3.41e-11 66.6
MS.gene039084.t1 AT1G55290 29.221 154 99 4 367 517 25 171 1.38e-15 79.0
MS.gene039084.t1 AT5G04420 29.004 231 150 8 42 262 101 327 2.28e-15 79.3
MS.gene039084.t1 AT5G04420 29.004 231 150 8 42 262 101 327 2.28e-15 79.3
MS.gene039084.t1 AT5G04420 29.004 231 150 8 42 262 101 327 2.28e-15 79.3
MS.gene039084.t1 AT5G50310 25.830 271 166 8 52 300 94 351 3.92e-15 79.0
MS.gene039084.t1 AT5G27630 25.087 287 188 7 19 292 164 436 1.59e-14 76.6
MS.gene039084.t1 AT5G27630 25.436 287 187 8 19 292 164 436 2.19e-14 76.6
MS.gene039084.t1 AT5G27630 25.436 287 187 8 19 292 164 436 2.31e-14 76.3
MS.gene039084.t1 AT2G36360 27.586 261 160 8 83 329 8 253 2.35e-14 75.9
MS.gene039084.t1 AT2G36360 26.582 237 152 9 43 261 77 309 9.37e-11 64.7
MS.gene039084.t1 AT2G36360 27.586 261 160 8 83 329 8 253 2.36e-14 75.9
MS.gene039084.t1 AT2G36360 26.582 237 152 9 43 261 77 309 9.41e-11 64.7
MS.gene039084.t1 AT2G36360 27.586 261 160 8 83 329 8 253 2.36e-14 75.9
MS.gene039084.t1 AT2G36360 26.582 237 152 9 43 261 77 309 9.41e-11 64.7
MS.gene039084.t1 AT5G27630 25.436 287 187 8 19 292 164 436 2.50e-14 76.3
MS.gene039084.t1 AT2G36360 27.586 261 160 8 83 329 8 253 2.50e-14 75.9
MS.gene039084.t1 AT2G36360 26.582 237 152 9 43 261 77 309 9.38e-11 64.7
MS.gene039084.t1 AT2G36690 31.788 151 94 3 367 513 20 165 2.91e-14 74.7
MS.gene039084.t1 AT2G36690 31.788 151 94 3 367 513 20 165 2.91e-14 74.7
MS.gene039084.t1 AT5G05600 26.966 178 123 4 348 520 7 182 4.28e-13 70.5
MS.gene039084.t1 AT1G51550 27.888 251 146 12 43 263 123 368 1.19e-12 70.5
MS.gene039084.t1 AT5G05600 26.966 178 123 4 348 520 7 182 2.34e-12 68.9
MS.gene039084.t1 AT3G12900 28.662 157 105 5 367 521 21 172 3.40e-12 68.6
MS.gene039084.t1 AT2G36360 26.667 270 160 9 83 329 8 262 4.46e-12 68.9
MS.gene039084.t1 AT1G68050 27.928 222 141 11 77 287 287 500 6.45e-12 68.6
MS.gene039084.t1 AT1G68050 25.373 335 209 16 37 348 299 615 3.79e-11 66.2
MS.gene039084.t1 AT2G38240 27.879 165 108 5 361 520 5 163 2.28e-11 65.9
MS.gene039084.t1 AT2G44800 25.166 151 112 1 354 504 2 151 2.29e-11 65.9
MS.gene039084.t1 AT4G10490 29.412 102 70 1 403 504 41 140 3.44e-11 65.1
MS.gene039084.t1 AT5G24530 27.966 118 70 2 405 512 39 151 8.56e-11 63.9

Find 156 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGAAGGCTCAATGATTTA+TGG 0.247369 2.4:+26582117 MS.gene039084:CDS
GTCTTGATAAAGAGTAAAAT+TGG 0.254512 2.4:-26583436 None:intergenic
TCCTCACCTTGGCATCTTGC+TGG 0.259911 2.4:-26583368 None:intergenic
GGAGAAACCATCTATGTATT+TGG 0.275442 2.4:+26581927 MS.gene039084:CDS
TGGAATTCCAGTTCATGTTT+TGG 0.293851 2.4:+26583314 MS.gene039084:CDS
ATGAACTACCACCGGTTTGC+AGG 0.303739 2.4:+26583520 MS.gene039084:CDS
GGACAGAAGGTTTATGCATT+TGG 0.314362 2.4:+26581771 MS.gene039084:CDS
CGTGGGTGGTGCGCATTTGC+CGG 0.322365 2.4:+26582536 MS.gene039084:CDS
ACGTGGCGGCGGTGTGTTCC+CGG 0.327871 2.4:-26581880 None:intergenic
TTGACACTAAAACCAACAAT+TGG 0.329490 2.4:+26581994 MS.gene039084:CDS
TTCAAAATGCAAGTGAGAAA+TGG 0.333502 2.4:+26583268 MS.gene039084:CDS
GGTGGTAGTTCATCAGCTTT+AGG 0.343905 2.4:-26583510 None:intergenic
ACATGTAACTTGTTATCAAC+GGG 0.356661 2.4:-26581816 None:intergenic
TCAAAATGCAAGTGAGAAAT+GGG 0.362845 2.4:+26583269 MS.gene039084:CDS
GAGTGTGATTTCCTACATTC+CGG 0.363139 2.4:+26579155 MS.gene039084:CDS
GGGAAACACATAATTGTATA+TGG 0.366421 2.4:+26582377 MS.gene039084:CDS
GTCCAAGGACTCATAGAAAA+TGG 0.369194 2.4:+26583093 MS.gene039084:CDS
ATCTCATCCAAAACATGAAC+TGG 0.379921 2.4:-26583321 None:intergenic
GTCCCTACAATTGACTTAAC+AGG 0.381724 2.4:+26583201 MS.gene039084:CDS
GCGCACCACCCACGTGGCCC+TGG 0.395028 2.4:-26582527 None:intergenic
TCTTCCACCAAATACATAGA+TGG 0.400451 2.4:-26581934 None:intergenic
ATCAAGACCAATCTGCTGAT+TGG 0.402608 2.4:+26583451 MS.gene039084:CDS
TGATTTCAAGTGGAGATGTT+GGG 0.404218 2.4:+26582021 MS.gene039084:CDS
TGGTCAGTAACCGATGTATC+CGG 0.412623 2.4:+26581861 MS.gene039084:CDS
ATTCCTGTTAAGTCAATTGT+AGG 0.415919 2.4:-26583204 None:intergenic
CCCTGGGCCACTGTTAGGCC+CGG 0.416654 2.4:-26582212 None:intergenic
TTCTTTCAAGTAATAAATCA+TGG 0.422804 2.4:+26583294 MS.gene039084:CDS
TGACGTGCATTTCTTCGATC+TGG 0.423289 2.4:+26582277 MS.gene039084:CDS
AGGAAGGCTCAATGATTTAT+GGG 0.428980 2.4:+26582118 MS.gene039084:CDS
TTGATTTCAAGTGGAGATGT+TGG 0.441999 2.4:+26582020 MS.gene039084:CDS
CCCATGTGACCTTGGTCACT+AGG 0.452252 2.4:-26582413 None:intergenic
TTGCAAGGGAAGAGGTGGGC+CGG 0.453359 2.4:+26582193 MS.gene039084:CDS
ACAACTTCATCTCTCAAAAC+AGG 0.453932 2.4:-26583237 None:intergenic
TGAAATCAAGGCCCAATTGT+TGG 0.455604 2.4:-26582006 None:intergenic
TCACATGCTATTGCTGTAGT+AGG 0.455781 2.4:+26581750 MS.gene039084:CDS
TCCTCCGTAACAGTCGTAAA+CGG 0.455917 2.4:-26579196 None:intergenic
GCCGGGCCTAACAGTGGCCC+AGG 0.464383 2.4:+26582211 MS.gene039084:CDS
TTGGACGATAAGGTGGAATC+AGG 0.467150 2.4:+26582497 MS.gene039084:CDS
TAAGCCCACTTGTTTCCACT+TGG 0.467507 2.4:-26582316 None:intergenic
TGACACTAAAACCAACAATT+GGG 0.468892 2.4:+26581995 MS.gene039084:CDS
TCATCAGCTTTAGGAGGATC+GGG 0.470689 2.4:-26583501 None:intergenic
AGTGTGATTTCCTACATTCC+GGG 0.473232 2.4:+26579156 MS.gene039084:CDS
TGCAAGGGAAGAGGTGGGCC+GGG 0.474673 2.4:+26582194 MS.gene039084:CDS
TTCATCAGCTTTAGGAGGAT+CGG 0.475741 2.4:-26583502 None:intergenic
TTTGGTGGCTGTGGAGTGGC+AGG 0.477833 2.4:+26582098 MS.gene039084:CDS
ATGGACGAGGTTGGACGATA+AGG 0.477851 2.4:+26582487 MS.gene039084:CDS
CAAGAGGGATTATTAGTGTA+TGG 0.478956 2.4:+26582575 MS.gene039084:CDS
CTTCCCTTGCAACTTTCACC+AGG 0.479391 2.4:-26582182 None:intergenic
AACATCTCCACTTGAAATCA+AGG 0.485982 2.4:-26582018 None:intergenic
AACACATAATTGTATATGGT+GGG 0.491224 2.4:+26582381 MS.gene039084:CDS
GAATTTGATGAGTCAAAGGT+TGG 0.494931 2.4:+26583069 MS.gene039084:CDS
TTTATGGGCCTTTGATGTTG+TGG 0.497159 2.4:+26582133 MS.gene039084:CDS
CCCTAGTGACCAAGGTCACA+TGG 0.498673 2.4:+26582412 MS.gene039084:CDS
TGTGTATGGTTTCGCTGGAA+TGG 0.500991 2.4:+26582247 MS.gene039084:CDS
GTGGAATCAGGTGATCATCC+AGG 0.503333 2.4:+26582509 MS.gene039084:CDS
TGGGTGGAATTTCCATCTCC+TGG 0.503407 2.4:+26582164 MS.gene039084:CDS
CTGACCATGTCAAGGTATCT+AGG 0.504039 2.4:-26581845 None:intergenic
ATCATCCAGGGCCACGTGGG+TGG 0.507358 2.4:+26582522 MS.gene039084:CDS
TTGCAACTTTCACCAGGAGA+TGG 0.508173 2.4:-26582176 None:intergenic
CAGAAGGTTTATGCATTTGG+CGG 0.511271 2.4:+26581774 MS.gene039084:CDS
GAACAATCTAATATCAATCA+TGG 0.512601 2.4:+26583147 MS.gene039084:CDS
GACCAAGGTCACATGGGTGC+TGG 0.513231 2.4:+26582419 MS.gene039084:CDS
CACATGTAACTTGTTATCAA+CGG 0.514174 2.4:-26581817 None:intergenic
AACACACCGCCGCCACGTGT+TGG 0.515632 2.4:+26581885 MS.gene039084:CDS
AAAGGAATTTGATGAGTCAA+AGG 0.522155 2.4:+26583065 MS.gene039084:CDS
TGTCCCTCCAATCAGCAGAT+TGG 0.523116 2.4:-26583458 None:intergenic
ATTAAGACAAACCTGCAAAC+CGG 0.524849 2.4:-26583531 None:intergenic
CCATGTGACCTTGGTCACTA+GGG 0.525844 2.4:-26582412 None:intergenic
GTGGCTGTGGAGTGGCAGGA+AGG 0.527333 2.4:+26582102 MS.gene039084:CDS
GACTGTTACGGAGGAAGTAG+AGG 0.530958 2.4:+26579204 MS.gene039084:CDS
AAGCCCACTTGTTTCCACTT+GGG 0.532207 2.4:-26582315 None:intergenic
TGGGTTGTGTATGGTTTCGC+TGG 0.532785 2.4:+26582242 MS.gene039084:CDS
GCAAGATGCCAAGGTGAGGA+AGG 0.534102 2.4:+26583371 MS.gene039084:CDS
ATGGAGTGGTAGCTACGGTT+AGG 0.534804 2.4:-26582047 None:intergenic
ATTTCCTACATTCCGGGTGT+CGG 0.535545 2.4:+26579162 MS.gene039084:CDS
TGTTCCGTTTACGACTGTTA+CGG 0.535917 2.4:+26579192 MS.gene039084:CDS
ACGTCGGTCATCGGCAGTCA+TGG 0.536504 2.4:-26582066 None:intergenic
ATCTCCGACACCCGGAATGT+AGG 0.536844 2.4:-26579166 None:intergenic
GACACTATCATGGACGAGGT+TGG 0.537344 2.4:+26582478 MS.gene039084:CDS
AAGACCAATCTGCTGATTGG+AGG 0.540908 2.4:+26583454 MS.gene039084:CDS
TTGGCTGCCTCGGCTAGCAC+CGG 0.541808 2.4:-26582555 None:intergenic
GAGTCAAAGGTTGGTGTCCA+AGG 0.541962 2.4:+26583078 MS.gene039084:CDS
CTTGCCATCCACAACATCAA+AGG 0.543652 2.4:-26582141 None:intergenic
ATAATCCCTCTTGGCTGCCT+CGG 0.546368 2.4:-26582565 None:intergenic
TGGGCCTTTGATGTTGTGGA+TGG 0.546782 2.4:+26582137 MS.gene039084:CDS
CTCTCAAAACAGGATCATCA+TGG 0.547021 2.4:-26583227 None:intergenic
GACCAGCACCCATGTGACCT+TGG 0.549010 2.4:-26582421 None:intergenic
GGTGAAAGTTGCAAGGGAAG+AGG 0.549168 2.4:+26582185 MS.gene039084:CDS
TCATCAAGCCTGTCGTTGCT+AGG 0.553094 2.4:-26582608 None:intergenic
GAAAGTTGCAAGGGAAGAGG+TGG 0.555227 2.4:+26582188 MS.gene039084:CDS
AATTGGGCCTTGATTTCAAG+TGG 0.556457 2.4:+26582011 MS.gene039084:CDS
TTGTTTCAGCTTGATCAAAG+AGG 0.556708 2.4:+26581705 MS.gene039084:intron
GAAACCATCTATGTATTTGG+TGG 0.556915 2.4:+26581930 MS.gene039084:CDS
AACATACACACGTCGGTCAT+CGG 0.557266 2.4:-26582075 None:intergenic
AACAAGTTGAAAACACACTA+CGG 0.558479 2.4:-26582349 None:intergenic
GCTAGCCGAGGCAGCCAAGA+GGG 0.561545 2.4:+26582560 MS.gene039084:CDS
GGTCAGTAACCGATGTATCC+GGG 0.565165 2.4:+26581862 MS.gene039084:CDS
TTGATGTTGTGGATGGCAAG+TGG 0.565683 2.4:+26582144 MS.gene039084:CDS
TGGTTTCGCTGGAATGGAAG+TGG 0.566273 2.4:+26582253 MS.gene039084:CDS
ATCTCCTGGTGAAAGTTGCA+AGG 0.567843 2.4:+26582178 MS.gene039084:CDS
CATACACTAATAATCCCTCT+TGG 0.571128 2.4:-26582574 None:intergenic
TTCCTGTTAAGTCAATTGTA+GGG 0.572686 2.4:-26583203 None:intergenic
TGATGTTGTGGATGGCAAGT+GGG 0.578551 2.4:+26582145 MS.gene039084:CDS
TCCGTTTACGACTGTTACGG+AGG 0.582925 2.4:+26579195 MS.gene039084:CDS
AGACCAATCTGCTGATTGGA+GGG 0.584002 2.4:+26583455 MS.gene039084:CDS
ATAGTACTCCTTCCTCACCT+TGG 0.587132 2.4:-26583379 None:intergenic
GCAACTCACCTAGCAACGAC+AGG 0.588373 2.4:+26582600 MS.gene039084:CDS
GTGACACCAACACGTGGCGG+CGG 0.589766 2.4:-26581891 None:intergenic
CCGGGCCTAACAGTGGCCCA+GGG 0.590476 2.4:+26582212 MS.gene039084:CDS
TATTGCTGTAGTAGGACAGA+AGG 0.590763 2.4:+26581758 MS.gene039084:CDS
TAAAGCTGATGAACTACCAC+CGG 0.591747 2.4:+26583512 MS.gene039084:CDS
AGGTGGGCCGGGCCTAACAG+TGG 0.595141 2.4:+26582205 MS.gene039084:CDS
GAAAACACACTACGGGCCGT+TGG 0.595615 2.4:-26582341 None:intergenic
ACAAGTTGAAAACACACTAC+GGG 0.597063 2.4:-26582348 None:intergenic
AAACACATAATTGTATATGG+TGG 0.598952 2.4:+26582380 MS.gene039084:CDS
GACGAGGTTGGACGATAAGG+TGG 0.598960 2.4:+26582490 MS.gene039084:CDS
GAACAGAAATCTCCGACACC+CGG 0.599312 2.4:-26579174 None:intergenic
ACACATAATTGTATATGGTG+GGG 0.601078 2.4:+26582382 MS.gene039084:CDS
CGGTGTGTTCCCGGATACAT+CGG 0.602171 2.4:-26581871 None:intergenic
GATCAAAGAGGAATCTTGCA+AGG 0.605041 2.4:+26581717 MS.gene039084:CDS
GAGTGGTAGCTACGGTTAGG+AGG 0.607165 2.4:-26582044 None:intergenic
ACTAACTTTGAGCAAGAGCA+AGG 0.608068 2.4:-26582640 None:intergenic
GGTAGTTCATCAGCTTTAGG+AGG 0.608431 2.4:-26583507 None:intergenic
AACAAGTGGGCTTAAACCAA+CGG 0.609427 2.4:+26582325 MS.gene039084:CDS
TAGACACGGAGACACTATCA+TGG 0.609879 2.4:+26582468 MS.gene039084:CDS
GCATTTGCCGGTGCTAGCCG+AGG 0.611791 2.4:+26582548 MS.gene039084:CDS
GAAATAGACCCTAGTGACCA+AGG 0.612642 2.4:+26582404 MS.gene039084:CDS
CGGAGACACTATCATGGACG+AGG 0.615534 2.4:+26582474 MS.gene039084:CDS
GGTGTCACGATGGCTGCAGT+TGG 0.615550 2.4:+26581906 MS.gene039084:CDS
TGGAATCAGGTGATCATCCA+GGG 0.616772 2.4:+26582510 MS.gene039084:CDS
TTGTTATCAACGGGGACACG+TGG 0.620860 2.4:-26581807 None:intergenic
ACCAGCAAGATGCCAAGGTG+AGG 0.623160 2.4:+26583367 MS.gene039084:CDS
ATTTCACCAGCAAGATGCCA+AGG 0.623273 2.4:+26583362 MS.gene039084:CDS
TCTCCTGGTGAAAGTTGCAA+GGG 0.623404 2.4:+26582179 MS.gene039084:CDS
TGTTGTGGATGGCAAGTGGG+TGG 0.625429 2.4:+26582148 MS.gene039084:CDS
TGGGCCCAAGTGGAAACAAG+TGG 0.628859 2.4:+26582311 MS.gene039084:CDS
GTGATCATCCAGGGCCACGT+GGG 0.629702 2.4:+26582519 MS.gene039084:CDS
ATCGGTTACTGACCATGTCA+AGG 0.632004 2.4:-26581853 None:intergenic
CAGTCATGGAGTGGTAGCTA+CGG 0.640561 2.4:-26582052 None:intergenic
GGTGATCATCCAGGGCCACG+TGG 0.641702 2.4:+26582518 MS.gene039084:CDS
CCTAGTGACCAAGGTCACAT+GGG 0.649054 2.4:+26582413 MS.gene039084:CDS
GGTCATCGGCAGTCATGGAG+TGG 0.651183 2.4:-26582061 None:intergenic
TGTTCACAATAGAACATGCG+TGG 0.652888 2.4:-26583129 None:intergenic
GAGGGATTATTAGTGTATGG+TGG 0.654652 2.4:+26582578 MS.gene039084:CDS
TGCTAGCCGAGGCAGCCAAG+AGG 0.662151 2.4:+26582559 MS.gene039084:CDS
GGGCCCAAGTGGAAACAAGT+GGG 0.666793 2.4:+26582312 MS.gene039084:CDS
CAAAATGCAAGTGAGAAATG+GGG 0.669107 2.4:+26583270 MS.gene039084:CDS
AAAGTTGCAAGGGAAGAGGT+GGG 0.669531 2.4:+26582189 MS.gene039084:CDS
GCCATCGTGACACCAACACG+TGG 0.675349 2.4:-26581897 None:intergenic
GCCACGTGTTGGTGTCACGA+TGG 0.676673 2.4:+26581896 MS.gene039084:CDS
ATCGTGACACCAACACGTGG+CGG 0.680472 2.4:-26581894 None:intergenic
GCAAATGCGCACCACCCACG+TGG 0.684596 2.4:-26582533 None:intergenic
TGAGCTTTATGCATTAGACA+CGG 0.693180 2.4:+26582454 MS.gene039084:CDS
AAGACAAACCTGCAAACCGG+TGG 0.695495 2.4:-26583528 None:intergenic
CATGTAACTTGTTATCAACG+GGG 0.715551 2.4:-26581815 None:intergenic
ACGACCTAGATACCTTGACA+TGG 0.737782 2.4:+26581841 MS.gene039084:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATATAAATCACAAA+TGG - chr2.4:26580156-26580175 None:intergenic 10.0%
!! CTATTATGATAAAAATAAAA+AGG - chr2.4:26581145-26581164 None:intergenic 10.0%
!!! AACTTTTAATAAATAATTGT+TGG + chr2.4:26581053-26581072 MS.gene039084:intron 10.0%
!!! AATTTTTTAATAAATAACTG+TGG - chr2.4:26579341-26579360 None:intergenic 10.0%
!!! GTTATAGTTTTTAAAAAAAA+TGG + chr2.4:26579546-26579565 MS.gene039084:intron 10.0%
!!! TAATTTTTCAATATAATCAA+AGG - chr2.4:26581500-26581519 None:intergenic 10.0%
!!! TGTTTTAGATTTAAAAAAAA+TGG - chr2.4:26579963-26579982 None:intergenic 10.0%
!!! TTTTAACAAAGAAATTTTTA+TGG + chr2.4:26579603-26579622 MS.gene039084:intron 10.0%
!!! TTTTTAAAAACTATAACAAA+CGG - chr2.4:26579543-26579562 None:intergenic 10.0%
!!! TTTTTTAAATCTAAAACAAA+CGG + chr2.4:26579965-26579984 MS.gene039084:intron 10.0%
!! AAACTAACAAATAGTTAATA+AGG + chr2.4:26580577-26580596 MS.gene039084:intron 15.0%
!! AATAACATATATTTAAGCTA+AGG - chr2.4:26582954-26582973 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr2.4:26580586-26580605 MS.gene039084:intron 15.0%
!! AATATTCTTAAAATTCTCTT+AGG + chr2.4:26581576-26581595 MS.gene039084:intron 15.0%
!! AGAAATAATGTATTTGTATT+TGG + chr2.4:26580819-26580838 MS.gene039084:intron 15.0%
!! ATCGATATATAAATAATACT+CGG - chr2.4:26580330-26580349 None:intergenic 15.0%
!! ATTTGAATTGTATTAGTATA+AGG + chr2.4:26580232-26580251 MS.gene039084:intron 15.0%
!! TAAAAGAAAACTATTTCAAA+TGG + chr2.4:26579736-26579755 MS.gene039084:intron 15.0%
!! TAAAATTAAAATTATGTAGC+AGG + chr2.4:26583009-26583028 MS.gene039084:intron 15.0%
!!! AGAAAAATCCTTTTATTAAT+TGG + chr2.4:26579425-26579444 MS.gene039084:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr2.4:26580461-26580480 None:intergenic 15.0%
!!! CATTTTGTTGTAATTTTTTT+TGG + chr2.4:26579689-26579708 MS.gene039084:intron 15.0%
!!! GAAAAATCCTTTTATTAATT+GGG + chr2.4:26579426-26579445 MS.gene039084:intron 15.0%
!!! GTCAAATTTTTCTTATAAAT+AGG - chr2.4:26580783-26580802 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr2.4:26580563-26580582 None:intergenic 15.0%
!!! TGATTTTGTAGAATTAATTT+TGG - chr2.4:26579507-26579526 None:intergenic 15.0%
!!! TGTATACTCTATTTTTATTT+GGG + chr2.4:26580942-26580961 MS.gene039084:intron 15.0%
!!! TTTCTTTGTATTTCTAAAAA+TGG - chr2.4:26579937-26579956 None:intergenic 15.0%
!!! TTTTTAAATCTAAAACAAAC+GGG + chr2.4:26579966-26579985 MS.gene039084:intron 15.0%
!! AATTATAGAACAAATGTTTC+CGG - chr2.4:26580083-26580102 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr2.4:26580501-26580520 None:intergenic 20.0%
!! AGTCATAAATAGTATTTGTA+GGG - chr2.4:26581602-26581621 None:intergenic 20.0%
!! ATTTATATATCGATGATGAT+AGG + chr2.4:26580336-26580355 MS.gene039084:intron 20.0%
!! TAAACTATATACATTCATTC+AGG + chr2.4:26580185-26580204 MS.gene039084:intron 20.0%
!! TTTCAATAAAAGTTAGAACA+CGG - chr2.4:26579317-26579336 None:intergenic 20.0%
!!! AGTTGAGATTTCAATTTTTT+AGG - chr2.4:26581465-26581484 None:intergenic 20.0%
!!! ATTTTTCTTATAAATAGGAC+CGG - chr2.4:26580778-26580797 None:intergenic 20.0%
!!! GTCAACTTTTTCTTATAAAT+AGG + chr2.4:26580888-26580907 MS.gene039084:intron 20.0%
!!! GTGTATACTCTATTTTTATT+TGG + chr2.4:26580941-26580960 MS.gene039084:intron 20.0%
!!! GTTGAGATTTCAATTTTTTA+GGG - chr2.4:26581464-26581483 None:intergenic 20.0%
!!! TGTTTTCAACTTGTTTAATT+GGG + chr2.4:26582357-26582376 MS.gene039084:CDS 20.0%
!!! TTCATTTTAAAAAATGTACC+AGG - chr2.4:26581664-26581683 None:intergenic 20.0%
!!! TTCTTTCAAGTAATAAATCA+TGG + chr2.4:26583294-26583313 MS.gene039084:CDS 20.0%
! AAACACATAATTGTATATGG+TGG + chr2.4:26582380-26582399 MS.gene039084:CDS 25.0%
! AAATTCTCAGAAACTATTCA+AGG - chr2.4:26581543-26581562 None:intergenic 25.0%
! AACACATAATTGTATATGGT+GGG + chr2.4:26582381-26582400 MS.gene039084:CDS 25.0%
! AACATATATTTAAGCTAAGG+CGG - chr2.4:26582951-26582970 None:intergenic 25.0%
! AACCTAACCCAATTAATAAA+AGG - chr2.4:26579436-26579455 None:intergenic 25.0%
! AGCTTATATGAGCTTATTTA+TGG - chr2.4:26581320-26581339 None:intergenic 25.0%
! ATACTAAACAATAATGAGAG+TGG + chr2.4:26580697-26580716 MS.gene039084:intron 25.0%
! ATTATAGAACAAATGTTTCC+GGG - chr2.4:26580082-26580101 None:intergenic 25.0%
! CTACAAAATCAATTCATTCA+GGG + chr2.4:26579516-26579535 MS.gene039084:intron 25.0%
! GAACAATCTAATATCAATCA+TGG + chr2.4:26583147-26583166 MS.gene039084:CDS 25.0%
! GACAATCAAAAGTTTATGTT+TGG - chr2.4:26581346-26581365 None:intergenic 25.0%
! GAGTCATAAATAGTATTTGT+AGG - chr2.4:26581603-26581622 None:intergenic 25.0%
! GTCTTGATAAAGAGTAAAAT+TGG - chr2.4:26583439-26583458 None:intergenic 25.0%
! GTTTCAAATGAAAAATTCGT+TGG + chr2.4:26579629-26579648 MS.gene039084:intron 25.0%
! TACAAAATCAATTCATTCAG+GGG + chr2.4:26579517-26579536 MS.gene039084:intron 25.0%
! TAGGTTTCTTAAATATGGAA+TGG + chr2.4:26579450-26579469 MS.gene039084:intron 25.0%
! TCTACAAAATCAATTCATTC+AGG + chr2.4:26579515-26579534 MS.gene039084:intron 25.0%
! TTAAAGCAGTAAGTTTATGT+TGG - chr2.4:26579391-26579410 None:intergenic 25.0%
! TTAAAGTAGTAACTTTGACT+TGG + chr2.4:26581003-26581022 MS.gene039084:intron 25.0%
! TTCAATAAAAGTTAGAACAC+GGG - chr2.4:26579316-26579335 None:intergenic 25.0%
! TTCTTAAATATGGAATGGTT+TGG + chr2.4:26579455-26579474 MS.gene039084:intron 25.0%
!! ATCCTTTTATTAATTGGGTT+AGG + chr2.4:26579431-26579450 MS.gene039084:intron 25.0%
!! CTTGTTATGAAATACAAGTA+CGG - chr2.4:26582986-26583005 None:intergenic 25.0%
!! CTTTTTCTTATAAATAGGAC+CGG + chr2.4:26580893-26580912 MS.gene039084:intron 25.0%
!! GGATTTTTCTAAATGTTAAG+AGG - chr2.4:26579415-26579434 None:intergenic 25.0%
!!! AAACGACACTCATTTTAAAA+CGG + chr2.4:26580669-26580688 MS.gene039084:intron 25.0%
!!! GGAAAGATAAACAACTTTTT+TGG - chr2.4:26583418-26583437 None:intergenic 25.0%
!!! GTAGTGAAAATTGATTTTGA+GGG - chr2.4:26579992-26580011 None:intergenic 25.0%
!!! GTGTTTTCAACTTGTTTAAT+TGG + chr2.4:26582356-26582375 MS.gene039084:CDS 25.0%
!!! TTTAAAATGAGTGTCGTTTT+AGG - chr2.4:26580668-26580687 None:intergenic 25.0%
AAAGGAATTTGATGAGTCAA+AGG + chr2.4:26583065-26583084 MS.gene039084:CDS 30.0%
ACACATAATTGTATATGGTG+GGG + chr2.4:26582382-26582401 MS.gene039084:CDS 30.0%
ATTCCTGTTAAGTCAATTGT+AGG - chr2.4:26583207-26583226 None:intergenic 30.0%
CTGGTATTTCAAATAGAACT+TGG + chr2.4:26582906-26582925 MS.gene039084:intron 30.0%
GGGAAACACATAATTGTATA+TGG + chr2.4:26582377-26582396 MS.gene039084:CDS 30.0%
TCAAAATGCAAGTGAGAAAT+GGG + chr2.4:26583269-26583288 MS.gene039084:CDS 30.0%
TGACACTAAAACCAACAATT+GGG + chr2.4:26581995-26582014 MS.gene039084:CDS 30.0%
TGACAGAAAAAGTGAACTAA+AGG + chr2.4:26583047-26583066 MS.gene039084:CDS 30.0%
TTCAAAATGCAAGTGAGAAA+TGG + chr2.4:26583268-26583287 MS.gene039084:CDS 30.0%
TTCCTGTTAAGTCAATTGTA+GGG - chr2.4:26583206-26583225 None:intergenic 30.0%
TTGACACTAAAACCAACAAT+TGG + chr2.4:26581994-26582013 MS.gene039084:CDS 30.0%
TTGGAAATTAGTTGACAATG+AGG + chr2.4:26582925-26582944 MS.gene039084:intron 30.0%
! AACAAGTTGAAAACACACTA+CGG - chr2.4:26582352-26582371 None:intergenic 30.0%
! CAAGTTCTATTTGAAATACC+AGG - chr2.4:26582908-26582927 None:intergenic 30.0%
! GTAATGTGCAGAGTATTAAT+TGG - chr2.4:26580538-26580557 None:intergenic 30.0%
! TGGGTTAGGTTTCTTAAATA+TGG + chr2.4:26579445-26579464 MS.gene039084:intron 30.0%
! TTTCAATGTTTTCTGACCAA+AGG - chr2.4:26580301-26580320 None:intergenic 30.0%
! TTTTGGATGAGATGATCAAA+GGG + chr2.4:26583331-26583350 MS.gene039084:CDS 30.0%
!! ACATGTAACTTGTTATCAAC+GGG - chr2.4:26581819-26581838 None:intergenic 30.0%
!! CACATGTAACTTGTTATCAA+CGG - chr2.4:26581820-26581839 None:intergenic 30.0%
!! GAATGGTTTGGTTATTGATT+TGG + chr2.4:26579467-26579486 MS.gene039084:intron 30.0%
!! GGTAGTGAAAATTGATTTTG+AGG - chr2.4:26579993-26580012 None:intergenic 30.0%
!! GTTTGGTTATTGATTTGGTT+AGG + chr2.4:26579472-26579491 MS.gene039084:intron 30.0%
AAAGCGTGTTTAATACAACC+TGG + chr2.4:26582887-26582906 MS.gene039084:intron 35.0%
AACATCTCCACTTGAAATCA+AGG - chr2.4:26582021-26582040 None:intergenic 35.0%
AATGAGAGTGGTTGTAAATG+TGG + chr2.4:26580709-26580728 MS.gene039084:intron 35.0%
ACAACTTCATCTCTCAAAAC+AGG - chr2.4:26583240-26583259 None:intergenic 35.0%
ACCATTTCACAAAACTGGTT+TGG - chr2.4:26579283-26579302 None:intergenic 35.0%
ACTATATCCTGATGAGCTTA+TGG + chr2.4:26581222-26581241 MS.gene039084:intron 35.0%
AGGAAGGCTCAATGATTTAT+GGG + chr2.4:26582118-26582137 MS.gene039084:CDS 35.0%
ATCTCATCCAAAACATGAAC+TGG - chr2.4:26583324-26583343 None:intergenic 35.0%
ATGGATACGTGAGACTATTT+GGG - chr2.4:26581301-26581320 None:intergenic 35.0%
ATGTTATAAGCTACTCCATC+CGG - chr2.4:26580915-26580934 None:intergenic 35.0%
ATTAAGACAAACCTGCAAAC+CGG - chr2.4:26583534-26583553 None:intergenic 35.0%
ATTAGACCTTACTTCACCTT+TGG + chr2.4:26580282-26580301 MS.gene039084:intron 35.0%
ATTGTGCTAAAAGTGATTCC+TGG + chr2.4:26581643-26581662 MS.gene039084:intron 35.0%
CAAAATGCAAGTGAGAAATG+GGG + chr2.4:26583270-26583289 MS.gene039084:CDS 35.0%
CAAGAGGGATTATTAGTGTA+TGG + chr2.4:26582575-26582594 MS.gene039084:CDS 35.0%
CATACACTAATAATCCCTCT+TGG - chr2.4:26582577-26582596 None:intergenic 35.0%
CTGAAACCATTTCACAAAAC+TGG - chr2.4:26579288-26579307 None:intergenic 35.0%
CTTATTTCCATAAGCTCATC+AGG - chr2.4:26581232-26581251 None:intergenic 35.0%
GAAACCATCTATGTATTTGG+TGG + chr2.4:26581930-26581949 MS.gene039084:CDS 35.0%
GAATTTGATGAGTCAAAGGT+TGG + chr2.4:26583069-26583088 MS.gene039084:CDS 35.0%
GCATATGTGTGATCAATTCT+AGG + chr2.4:26582690-26582709 MS.gene039084:intron 35.0%
GGAGAAACCATCTATGTATT+TGG + chr2.4:26581927-26581946 MS.gene039084:CDS 35.0%
GGTTGTAAATGTGGTGAATT+GGG + chr2.4:26580718-26580737 MS.gene039084:intron 35.0%
GTGCAATATTGCACATGTTA+AGG - chr2.4:26581134-26581115 None:intergenic 35.0%
TATGGATACGTGAGACTATT+TGG - chr2.4:26581302-26581321 None:intergenic 35.0%
TCAGTATGTCATGTGAACTT+AGG + chr2.4:26582733-26582752 MS.gene039084:intron 35.0%
TCTTCCACCAAATACATAGA+TGG - chr2.4:26581937-26581956 None:intergenic 35.0%
TGGTTGTAAATGTGGTGAAT+TGG + chr2.4:26580717-26580736 MS.gene039084:intron 35.0%
TGTGGTGAATTGGGTATAAA+TGG + chr2.4:26580727-26580746 MS.gene039084:intron 35.0%
TTCTCAGAAACTATTCAAGG+TGG - chr2.4:26581540-26581559 None:intergenic 35.0%
TTCTTATAAATAGGACCGGA+GGG - chr2.4:26580916-26580897 None:intergenic 35.0%
TTCTTATAAATAGGACCGGA+TGG + chr2.4:26580897-26580916 MS.gene039084:intron 35.0%
TTGTTTCAGCTTGATCAAAG+AGG + chr2.4:26581705-26581724 MS.gene039084:intron 35.0%
TTTCTTATAAATAGGACCGG+AGG - chr2.4:26580915-26580896 None:intergenic 35.0%
! ACAAGTTGAAAACACACTAC+GGG - chr2.4:26582351-26582370 None:intergenic 35.0%
! ATGTGCAGAGTATTAATTGG+AGG - chr2.4:26580535-26580554 None:intergenic 35.0%
! CTATAGTGAAGTATCTTGTG+TGG - chr2.4:26581409-26581428 None:intergenic 35.0%
! GGAAAAATATGGGTTGTGTA+TGG + chr2.4:26582233-26582252 MS.gene039084:CDS 35.0%
! TGAGCTTTATGCATTAGACA+CGG + chr2.4:26582454-26582473 MS.gene039084:CDS 35.0%
! TGATTTCAAGTGGAGATGTT+GGG + chr2.4:26582021-26582040 MS.gene039084:CDS 35.0%
! TGGAATTCCAGTTCATGTTT+TGG + chr2.4:26583314-26583333 MS.gene039084:CDS 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr2.4:26580534-26580553 None:intergenic 35.0%
! TTGATTTCAAGTGGAGATGT+TGG + chr2.4:26582020-26582039 MS.gene039084:CDS 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr2.4:26580435-26580454 None:intergenic 35.0%
!! CAGTTTTGTGAAATGGTTTC+AGG + chr2.4:26579286-26579305 MS.gene039084:intron 35.0%
!! CATGTAACTTGTTATCAACG+GGG - chr2.4:26581818-26581837 None:intergenic 35.0%
!! GTTTTGGATGAGATGATCAA+AGG + chr2.4:26583330-26583349 MS.gene039084:CDS 35.0%
!! TCCAAACCAGTTTTGTGAAA+TGG + chr2.4:26579279-26579298 MS.gene039084:intron 35.0%
!!! AACTTTTTTGGTGAGATCAC+GGG - chr2.4:26583406-26583425 None:intergenic 35.0%
!!! CAACTTTTTTGGTGAGATCA+CGG - chr2.4:26583407-26583426 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+GGG + chr2.4:26580673-26580692 MS.gene039084:intron 35.0%
AATTGGGCCTTGATTTCAAG+TGG + chr2.4:26582011-26582030 MS.gene039084:CDS 40.0%
ACTAACTTTGAGCAAGAGCA+AGG - chr2.4:26582643-26582662 None:intergenic 40.0%
AGTGTGATTTCCTACATTCC+GGG + chr2.4:26579156-26579175 MS.gene039084:CDS 40.0%
ATCAAGACCAATCTGCTGAT+TGG + chr2.4:26583451-26583470 MS.gene039084:CDS 40.0%
CACCAAAAACATACACACGT+CGG - chr2.4:26582085-26582104 None:intergenic 40.0%
CAGAAGGTTTATGCATTTGG+CGG + chr2.4:26581774-26581793 MS.gene039084:CDS 40.0%
CAGGAAGGCTCAATGATTTA+TGG + chr2.4:26582117-26582136 MS.gene039084:CDS 40.0%
CTCTCAAAACAGGATCATCA+TGG - chr2.4:26583230-26583249 None:intergenic 40.0%
GAGGGATTATTAGTGTATGG+TGG + chr2.4:26582578-26582597 MS.gene039084:CDS 40.0%
GAGTGTGATTTCCTACATTC+CGG + chr2.4:26579155-26579174 MS.gene039084:CDS 40.0%
GATCAAAGAGGAATCTTGCA+AGG + chr2.4:26581717-26581736 MS.gene039084:CDS 40.0%
GGACAGAAGGTTTATGCATT+TGG + chr2.4:26581771-26581790 MS.gene039084:CDS 40.0%
GTCCAAGGACTCATAGAAAA+TGG + chr2.4:26583093-26583112 MS.gene039084:CDS 40.0%
TAAAGCTGATGAACTACCAC+CGG + chr2.4:26583512-26583531 MS.gene039084:CDS 40.0%
TATTGCTGTAGTAGGACAGA+AGG + chr2.4:26581758-26581777 MS.gene039084:CDS 40.0%
TCACATGCTATTGCTGTAGT+AGG + chr2.4:26581750-26581769 MS.gene039084:CDS 40.0%
TCAGAAACTATTCAAGGTGG+TGG - chr2.4:26581537-26581556 None:intergenic 40.0%
TGAAATCAAGGCCCAATTGT+TGG - chr2.4:26582009-26582028 None:intergenic 40.0%
TGCTCTTGCTCAAAGTTAGT+TGG + chr2.4:26582643-26582662 MS.gene039084:intron 40.0%
TGTTCCGTTTACGACTGTTA+CGG + chr2.4:26579192-26579211 MS.gene039084:CDS 40.0%
TTCTGACCAAAGGTGAAGTA+AGG - chr2.4:26580291-26580310 None:intergenic 40.0%
TTTATGGGCCTTTGATGTTG+TGG + chr2.4:26582133-26582152 MS.gene039084:CDS 40.0%
! AACAAGTGGGCTTAAACCAA+CGG + chr2.4:26582325-26582344 MS.gene039084:CDS 40.0%
! ACACAACCCATATTTTTCCC+TGG - chr2.4:26582232-26582251 None:intergenic 40.0%
! ACTCAACATTTTACTCCCTC+CGG + chr2.4:26580756-26580775 MS.gene039084:intron 40.0%
! CACAACCCATATTTTTCCCT+GGG - chr2.4:26582231-26582250 None:intergenic 40.0%
! CACCATTTTCTATGAGTCCT+TGG - chr2.4:26583098-26583117 None:intergenic 40.0%
! CACGAAGAGTTGGTTGATTT+GGG + chr2.4:26580033-26580052 MS.gene039084:intron 40.0%
! GGACACACTTGCATTTTTCT+GGG + chr2.4:26583476-26583495 MS.gene039084:CDS 40.0%
! GTCCCTACAATTGACTTAAC+AGG + chr2.4:26583201-26583220 MS.gene039084:CDS 40.0%
! TCACGAAGAGTTGGTTGATT+TGG + chr2.4:26580032-26580051 MS.gene039084:intron 40.0%
!! TCACAAAACTGGTTTGGAAC+CGG - chr2.4:26579277-26579296 None:intergenic 40.0%
!! TTCATCAGCTTTAGGAGGAT+CGG - chr2.4:26583505-26583524 None:intergenic 40.0%
!!! CGACACTCATTTTAAAACGG+AGG + chr2.4:26580672-26580691 MS.gene039084:intron 40.0%
!!! GACACTCATTTTGAAACGGA+TGG - chr2.4:26580431-26580450 None:intergenic 40.0%
AAAGTTGCAAGGGAAGAGGT+GGG + chr2.4:26582189-26582208 MS.gene039084:CDS 45.0%
AACATACACACGTCGGTCAT+CGG - chr2.4:26582078-26582097 None:intergenic 45.0%
AAGCCCACTTGTTTCCACTT+GGG - chr2.4:26582318-26582337 None:intergenic 45.0%
ACGACCTAGATACCTTGACA+TGG + chr2.4:26581841-26581860 MS.gene039084:CDS 45.0%
AGTGGCCCAGGGAAAAATAT+GGG + chr2.4:26582223-26582242 MS.gene039084:CDS 45.0%
ATAGTACTCCTTCCTCACCT+TGG - chr2.4:26583382-26583401 None:intergenic 45.0%
ATCGGTTACTGACCATGTCA+AGG - chr2.4:26581856-26581875 None:intergenic 45.0%
ATCTCCTGGTGAAAGTTGCA+AGG + chr2.4:26582178-26582197 MS.gene039084:CDS 45.0%
ATTTCACCAGCAAGATGCCA+AGG + chr2.4:26583362-26583381 MS.gene039084:CDS 45.0%
ATTTCCTACATTCCGGGTGT+CGG + chr2.4:26579162-26579181 MS.gene039084:CDS 45.0%
CGATCTGGCCCAAAAAACAT+GGG + chr2.4:26582292-26582311 MS.gene039084:CDS 45.0%
CTTGCCATCCACAACATCAA+AGG - chr2.4:26582144-26582163 None:intergenic 45.0%
GAAATAGACCCTAGTGACCA+AGG + chr2.4:26582404-26582423 MS.gene039084:CDS 45.0%
GGTGGTAGTTCATCAGCTTT+AGG - chr2.4:26583513-26583532 None:intergenic 45.0%
TAAGCCCACTTGTTTCCACT+TGG - chr2.4:26582319-26582338 None:intergenic 45.0%
TAGACACGGAGACACTATCA+TGG + chr2.4:26582468-26582487 MS.gene039084:CDS 45.0%
TCCTCCGTAACAGTCGTAAA+CGG - chr2.4:26579199-26579218 None:intergenic 45.0%
TCGATCTGGCCCAAAAAACA+TGG + chr2.4:26582291-26582310 MS.gene039084:CDS 45.0%
TCTCCTGGTGAAAGTTGCAA+GGG + chr2.4:26582179-26582198 MS.gene039084:CDS 45.0%
TGACGTGCATTTCTTCGATC+TGG + chr2.4:26582277-26582296 MS.gene039084:CDS 45.0%
TGATGTTGTGGATGGCAAGT+GGG + chr2.4:26582145-26582164 MS.gene039084:CDS 45.0%
TGGAATCAGGTGATCATCCA+GGG + chr2.4:26582510-26582529 MS.gene039084:CDS 45.0%
TGGTCAGTAACCGATGTATC+CGG + chr2.4:26581861-26581880 MS.gene039084:CDS 45.0%
TGTGTATGGTTTCGCTGGAA+TGG + chr2.4:26582247-26582266 MS.gene039084:CDS 45.0%
TTGATGTTGTGGATGGCAAG+TGG + chr2.4:26582144-26582163 MS.gene039084:CDS 45.0%
TTGCAACTTTCACCAGGAGA+TGG - chr2.4:26582179-26582198 None:intergenic 45.0%
TTGGACGATAAGGTGGAATC+AGG + chr2.4:26582497-26582516 MS.gene039084:CDS 45.0%
! AAGACCAATCTGCTGATTGG+AGG + chr2.4:26583454-26583473 MS.gene039084:CDS 45.0%
! AGACCAATCTGCTGATTGGA+GGG + chr2.4:26583455-26583474 MS.gene039084:CDS 45.0%
! CTGACCATGTCAAGGTATCT+AGG - chr2.4:26581848-26581867 None:intergenic 45.0%
! GACCGACGTGTGTATGTTTT+TGG + chr2.4:26582080-26582099 MS.gene039084:CDS 45.0%
! GACGTGTGTGTTTGGTTTAG+CGG - chr2.4:26580014-26580033 None:intergenic 45.0%
! GGGACACACTTGCATTTTTC+TGG + chr2.4:26583475-26583494 MS.gene039084:CDS 45.0%
! GTTCTAAACCTAACCCGAAC+CGG + chr2.4:26579255-26579274 MS.gene039084:intron 45.0%
!! AAACTGGTTTGGAACCGGTT+CGG - chr2.4:26579272-26579291 None:intergenic 45.0%
!! GGTAGTTCATCAGCTTTAGG+AGG - chr2.4:26583510-26583529 None:intergenic 45.0%
!! TCATCAGCTTTAGGAGGATC+GGG - chr2.4:26583504-26583523 None:intergenic 45.0%
!!! ATGGGTGCTGGTCAATTTTC+AGG + chr2.4:26582431-26582450 MS.gene039084:CDS 45.0%
!!! CACTTGGGCCCATGTTTTTT+GGG - chr2.4:26582303-26582322 None:intergenic 45.0%
!!! CGACGTGTGTATGTTTTTGG+TGG + chr2.4:26582083-26582102 MS.gene039084:CDS 45.0%
!!! GTGTATGTTTTTGGTGGCTG+TGG + chr2.4:26582089-26582108 MS.gene039084:CDS 45.0%
!! TATTATGATAAAAATAAAAA+GGG - chr2.4:26581144-26581163 None:intergenic 5.0%
AAGACAAACCTGCAAACCGG+TGG - chr2.4:26583531-26583550 None:intergenic 50.0%
ACACACACGTCACGAAGAGT+TGG + chr2.4:26580023-26580042 MS.gene039084:intron 50.0%
ATAATCCCTCTTGGCTGCCT+CGG - chr2.4:26582568-26582587 None:intergenic 50.0%
ATGGACGAGGTTGGACGATA+AGG + chr2.4:26582487-26582506 MS.gene039084:CDS 50.0%
ATGGAGTGGTAGCTACGGTT+AGG - chr2.4:26582050-26582069 None:intergenic 50.0%
CAGTCATGGAGTGGTAGCTA+CGG - chr2.4:26582055-26582074 None:intergenic 50.0%
CAGTGGCCCAGGGAAAAATA+TGG + chr2.4:26582222-26582241 MS.gene039084:CDS 50.0%
CCAAAAAACATGGGCCCAAG+TGG + chr2.4:26582301-26582320 MS.gene039084:CDS 50.0%
CCATGTGACCTTGGTCACTA+GGG - chr2.4:26582415-26582434 None:intergenic 50.0%
CCTAGTGACCAAGGTCACAT+GGG + chr2.4:26582413-26582432 MS.gene039084:CDS 50.0%
CTCTTCGTGACGTGTGTGTT+TGG - chr2.4:26580022-26580041 None:intergenic 50.0%
CTTCCCTTGCAACTTTCACC+AGG - chr2.4:26582185-26582204 None:intergenic 50.0%
GAAAGTTGCAAGGGAAGAGG+TGG + chr2.4:26582188-26582207 MS.gene039084:CDS 50.0%
GAACAGAAATCTCCGACACC+CGG - chr2.4:26579177-26579196 None:intergenic 50.0%
GACACTATCATGGACGAGGT+TGG + chr2.4:26582478-26582497 MS.gene039084:CDS 50.0%
GACTGTTACGGAGGAAGTAG+AGG + chr2.4:26579204-26579223 MS.gene039084:CDS 50.0%
GGTCAGTAACCGATGTATCC+GGG + chr2.4:26581862-26581881 MS.gene039084:CDS 50.0%
GGTGAAAGTTGCAAGGGAAG+AGG + chr2.4:26582185-26582204 MS.gene039084:CDS 50.0%
GTGGAATCAGGTGATCATCC+AGG + chr2.4:26582509-26582528 MS.gene039084:CDS 50.0%
TCATCAAGCCTGTCGTTGCT+AGG - chr2.4:26582611-26582630 None:intergenic 50.0%
TCCGTTTACGACTGTTACGG+AGG + chr2.4:26579195-26579214 MS.gene039084:CDS 50.0%
TGGGCCTTTGATGTTGTGGA+TGG + chr2.4:26582137-26582156 MS.gene039084:CDS 50.0%
TGGGTGGAATTTCCATCTCC+TGG + chr2.4:26582164-26582183 MS.gene039084:CDS 50.0%
TGGGTTGTGTATGGTTTCGC+TGG + chr2.4:26582242-26582261 MS.gene039084:CDS 50.0%
TGGTTTCGCTGGAATGGAAG+TGG + chr2.4:26582253-26582272 MS.gene039084:CDS 50.0%
TGTCCCTCCAATCAGCAGAT+TGG - chr2.4:26583461-26583480 None:intergenic 50.0%
TTGTTATCAACGGGGACACG+TGG - chr2.4:26581810-26581829 None:intergenic 50.0%
! GTAGAGGCGTATAGAGAGAG+AGG + chr2.4:26579220-26579239 MS.gene039084:intron 50.0%
! TTTTTCCCTGGGCCACTGTT+AGG - chr2.4:26582220-26582239 None:intergenic 50.0%
!! AACTGGTTTGGAACCGGTTC+GGG - chr2.4:26579271-26579290 None:intergenic 50.0%
!! ATGAACTACCACCGGTTTGC+AGG + chr2.4:26583520-26583539 MS.gene039084:CDS 50.0%
!! GAGTCAAAGGTTGGTGTCCA+AGG + chr2.4:26583078-26583097 MS.gene039084:CDS 50.0%
!!! CCACTTGGGCCCATGTTTTT+TGG - chr2.4:26582304-26582323 None:intergenic 50.0%
!!! TGTTTTTGGTGGCTGTGGAG+TGG + chr2.4:26582094-26582113 MS.gene039084:CDS 50.0%
ACCAGCAAGATGCCAAGGTG+AGG + chr2.4:26583367-26583386 MS.gene039084:CDS 55.0%
ACCCTCTTGTGTCTCTGACC+CGG + chr2.4:26580061-26580080 MS.gene039084:intron 55.0%
ATCGTGACACCAACACGTGG+CGG - chr2.4:26581897-26581916 None:intergenic 55.0%
ATCTCCGACACCCGGAATGT+AGG - chr2.4:26579169-26579188 None:intergenic 55.0%
CCCATGTGACCTTGGTCACT+AGG - chr2.4:26582416-26582435 None:intergenic 55.0%
CCCTAGTGACCAAGGTCACA+TGG + chr2.4:26582412-26582431 MS.gene039084:CDS 55.0%
CGGAGACACTATCATGGACG+AGG + chr2.4:26582474-26582493 MS.gene039084:CDS 55.0%
CGGTGTGTTCCCGGATACAT+CGG - chr2.4:26581874-26581893 None:intergenic 55.0%
GAAAACACACTACGGGCCGT+TGG - chr2.4:26582344-26582363 None:intergenic 55.0%
GACGAGGTTGGACGATAAGG+TGG + chr2.4:26582490-26582509 MS.gene039084:CDS 55.0%
GAGTGGTAGCTACGGTTAGG+AGG - chr2.4:26582047-26582066 None:intergenic 55.0%
GCAACTCACCTAGCAACGAC+AGG + chr2.4:26582600-26582619 MS.gene039084:CDS 55.0%
GCAAGATGCCAAGGTGAGGA+AGG + chr2.4:26583371-26583390 MS.gene039084:CDS 55.0%
GGGCCCAAGTGGAAACAAGT+GGG + chr2.4:26582312-26582331 MS.gene039084:CDS 55.0%
TCCGGGTCAGAGACACAAGA+GGG - chr2.4:26580065-26580084 None:intergenic 55.0%
TCCTCACCTTGGCATCTTGC+TGG - chr2.4:26583371-26583390 None:intergenic 55.0%
TGGGCCCAAGTGGAAACAAG+TGG + chr2.4:26582311-26582330 MS.gene039084:CDS 55.0%
TGTTGTGGATGGCAAGTGGG+TGG + chr2.4:26582148-26582167 MS.gene039084:CDS 55.0%
TTCCGGGTCAGAGACACAAG+AGG - chr2.4:26580066-26580085 None:intergenic 55.0%
!! GTTTGGAACCGGTTCGGGTT+AGG - chr2.4:26579266-26579285 None:intergenic 55.0%
ACGTCGGTCATCGGCAGTCA+TGG - chr2.4:26582069-26582088 None:intergenic 60.0%
GACCAAGGTCACATGGGTGC+TGG + chr2.4:26582419-26582438 MS.gene039084:CDS 60.0%
GACCAGCACCCATGTGACCT+TGG - chr2.4:26582424-26582443 None:intergenic 60.0%
GCCATCGTGACACCAACACG+TGG - chr2.4:26581900-26581919 None:intergenic 60.0%
GGTCATCGGCAGTCATGGAG+TGG - chr2.4:26582064-26582083 None:intergenic 60.0%
GTGATCATCCAGGGCCACGT+GGG + chr2.4:26582519-26582538 MS.gene039084:CDS 60.0%
TTGCAAGGGAAGAGGTGGGC+CGG + chr2.4:26582193-26582212 MS.gene039084:CDS 60.0%
! GGTGTCACGATGGCTGCAGT+TGG + chr2.4:26581906-26581925 MS.gene039084:CDS 60.0%
! TTTGGTGGCTGTGGAGTGGC+AGG + chr2.4:26582098-26582117 MS.gene039084:CDS 60.0%
!! GCCACGTGTTGGTGTCACGA+TGG + chr2.4:26581896-26581915 MS.gene039084:CDS 60.0%
AACACACCGCCGCCACGTGT+TGG + chr2.4:26581885-26581904 MS.gene039084:CDS 65.0%
ATCATCCAGGGCCACGTGGG+TGG + chr2.4:26582522-26582541 MS.gene039084:CDS 65.0%
CGTGGGTGGTGCGCATTTGC+CGG + chr2.4:26582536-26582555 MS.gene039084:CDS 65.0%
GCAAATGCGCACCACCCACG+TGG - chr2.4:26582536-26582555 None:intergenic 65.0%
GCTAGCCGAGGCAGCCAAGA+GGG + chr2.4:26582560-26582579 MS.gene039084:CDS 65.0%
GGTGATCATCCAGGGCCACG+TGG + chr2.4:26582518-26582537 MS.gene039084:CDS 65.0%
GTGACACCAACACGTGGCGG+CGG - chr2.4:26581894-26581913 None:intergenic 65.0%
GTGGCTGTGGAGTGGCAGGA+AGG + chr2.4:26582102-26582121 MS.gene039084:CDS 65.0%
TGCAAGGGAAGAGGTGGGCC+GGG + chr2.4:26582194-26582213 MS.gene039084:CDS 65.0%
TGCTAGCCGAGGCAGCCAAG+AGG + chr2.4:26582559-26582578 MS.gene039084:CDS 65.0%
TTGGCTGCCTCGGCTAGCAC+CGG - chr2.4:26582558-26582577 None:intergenic 65.0%
! GCATTTGCCGGTGCTAGCCG+AGG + chr2.4:26582548-26582567 MS.gene039084:CDS 65.0%
ACGTGGCGGCGGTGTGTTCC+CGG - chr2.4:26581883-26581902 None:intergenic 70.0%
AGGTGGGCCGGGCCTAACAG+TGG + chr2.4:26582205-26582224 MS.gene039084:CDS 70.0%
CCCTGGGCCACTGTTAGGCC+CGG - chr2.4:26582215-26582234 None:intergenic 70.0%
CCGGGCCTAACAGTGGCCCA+GGG + chr2.4:26582212-26582231 MS.gene039084:CDS 70.0%
GCCGGGCCTAACAGTGGCCC+AGG + chr2.4:26582211-26582230 MS.gene039084:CDS 75.0%
! GCGCACCACCCACGTGGCCC+TGG - chr2.4:26582530-26582549 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 26579132 26583563 26579132 ID=MS.gene039084
chr2.4 mRNA 26579132 26583563 26579132 ID=MS.gene039084.t1;Parent=MS.gene039084
chr2.4 exon 26579132 26579227 26579132 ID=MS.gene039084.t1.exon1;Parent=MS.gene039084.t1
chr2.4 CDS 26579132 26579227 26579132 ID=cds.MS.gene039084.t1;Parent=MS.gene039084.t1
chr2.4 exon 26581714 26582656 26581714 ID=MS.gene039084.t1.exon2;Parent=MS.gene039084.t1
chr2.4 CDS 26581714 26582656 26581714 ID=cds.MS.gene039084.t1;Parent=MS.gene039084.t1
chr2.4 exon 26583031 26583563 26583031 ID=MS.gene039084.t1.exon3;Parent=MS.gene039084.t1
chr2.4 CDS 26583031 26583563 26583031 ID=cds.MS.gene039084.t1;Parent=MS.gene039084.t1
Gene Sequence

>MS.gene039084

ATGATCGTCGTTGATGATGTCGTGAGTGTGATTTCCTACATTCCGGGTGTCGGAGATTTCTGTTCCGTTTACGACTGTTACGGAGGAAGTAGAGGCGTATAGAGAGAGAGGTTGCTGCAAGTTGTTCTAAACCTAACCCGAACCGGTTCCAAACCAGTTTTGTGAAATGGTTTCAGGTATACCCGTGTTCTAACTTTTATTGAAAACCACAGTTATTTATTAAAAAATTGCATATTTAAAATAAAATACAAAAGTTCCAACATAAACTTACTGCTTTAAACCTCTTAACATTTAGAAAAATCCTTTTATTAATTGGGTTAGGTTTCTTAAATATGGAATGGTTTGGTTATTGATTTGGTTAGGATTTTTTAACCAAAATTAATTCTACAAAATCAATTCATTCAGGGGCCGTTTGTTATAGTTTTTAAAAAAAATGGATTTTTGTAGTGTAATATGTTTTTGTTATAATTTTTTTAACAAAGAAATTTTTATGGAAAGTTTCAAATGAAAAATTCGTTGGAATAGTTCATCTTAAAATGTCATATTAAGTATTTCATCATTTTGTTGTAATTTTTTTTGGATGCTAAAATTTTGAAAAAATCTCTAAAAGAAAACTATTTCAAATGGCTTTTCATAAAAATCATTTTTGAAAGATGAAATTTTCAAAAAATATGTGATATTTATTACGTAAAATCTAGAACAATGATTATGTAAGTTAGAGAACGTCAAAATCTCTTTTTTAACTTATAACAAATGAGATTGATATAACTTCTACTATTTTCGAATAAATTTTCAAAAAAATCCATTTTTAGAAATACAAAGAAAAATCCATTTTTTTTAAATCTAAAACAAACGGGCCCTCAAAATCAATTTTCACTACCGCTAAACCAAACACACACGTCACGAAGAGTTGGTTGATTTGGGTTTTGACCCTCTTGTGTCTCTGACCCGGAAACATTTGTTCTATAATTTAATAATATTTAATATTGATTGTTATTTCTTTTTCTTTCTTTCATAAATACCATTTGTGATTTATATTTTTTTTGACAAAAATAAACTATATACATTCATTCAGGAGAAAAATATCTTTTTATTATATGATTTGAATTGTATTAGTATAAGGATTAGTATGTTTTTTTAATAGTACTTGATTAGACCTTACTTCACCTTTGGTCAGAAAACATTGAAATCACAACCGAGTATTATTTATATATCGATGATGATAGGATGATATCAAAACGAAATGCTGCAATCTAAGCATTTATATACAACAACATACAACAAATAAAAAATACTCCATCCGTTTCAAAATGAGTGTCGCTTTAGCCAAAAAAAATTGTTTCAAAATGAATGTCGCTTTCAGTTTCCAATGCAATAATAACTTTTTCTTTTAATTGTACCCTCCAATTAATACTCTGCACATTACTTCCAAAGTATTACTTTTAAAACTAACAAATAGTTAATAAGGATAATTTGGTAAAATAATCATTCTCTTTCTTTTAATCATTGCATTTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTAAAACGGAGGGAATACTAAACAATAATGAGAGTGGTTGTAAATGTGGTGAATTGGGTATAAATGGAATTTTACTCAACATTTTACTCCCTCCGGTCCTATTTATAAGAAAAATTTGACTTTTTTGATTCATTGTAGAAATAATGTATTTGTATTTGGTCTATATTCTATAGCAAGTACATTAATTACTCAATGAATCTAAAAAGTCAACTTTTTCTTATAAATAGGACCGGATGGAGTAGCTTATAACATAAACTTGTGTATACTCTATTTTTATTTGGGTTTTTCTATCATGTGCAAATTTGCACATGATAAGAAGTTTAAAGTAGTAACTTTGACTTGGTACTTGTATTTTTTATATTAAATATGTAACTTTTAATAAATAATTGTTGGTTTTCAATGAAAAGTTACTACTTTTAGTTGCCTTAACATGTGCAATATTGCACATGTTAGACAAACCCTTTTTATTTTTATCATAATAGATAAAATAAAAAATAAAGTCAAATTGTTTTCTTATAAATTATAAGTTGTTTTCATAAACTATATCCTGATGAGCTTATGGAAATAAGCTGAAAACAACTTATGAAAATGTCACAAGTTGTGTTCATAAGTTTTCCCAAATAGTCTCACGTATCCATAAATAAGCTCATATAAGCTAATCCAAACATAAACTTTTGATTGTCGTCAAAGTTTGAACAATTTTCAAACATCGTTATCAGTAGACCACACAAGATACTTCACTATAGCAATTGCTTGTATGTTAGCTAAAGAAACTAATCCCTAAAAAATTGAAATCTCAACTTTAATTTCAAATCCTTTGATTATATTGAAAAATTATGCGTTATCTTCTACCACCACCTTGAATAGTTTCTGAGAATTTTAATATACTAGAGAATATTCTTAAAATTCTCTTAGGCCCTACAAATACTATTTATGACTCTGAAAAATTGAAATAATCTTATTGTGCTAAAAGTGATTCCTGGTACATTTTTTAAAATGAATTATTCAGAATATTTTAATTATTGTTTCAGCTTGATCAAAGAGGAATCTTGCAAGGAGCAAGAAGTTCACATGCTATTGCTGTAGTAGGACAGAAGGTTTATGCATTTGGCGGTGAGTTTGAGCCACGTGTCCCCGTTGATAACAAGTTACATGTGTACGACCTAGATACCTTGACATGGTCAGTAACCGATGTATCCGGGAACACACCGCCGCCACGTGTTGGTGTCACGATGGCTGCAGTTGGAGAAACCATCTATGTATTTGGTGGAAGAGATGCTGAACACAATGAACTCAATGAGCTCTATTCTTTTGACACTAAAACCAACAATTGGGCCTTGATTTCAAGTGGAGATGTTGGGCCTCCTAACCGTAGCTACCACTCCATGACTGCCGATGACCGACGTGTGTATGTTTTTGGTGGCTGTGGAGTGGCAGGAAGGCTCAATGATTTATGGGCCTTTGATGTTGTGGATGGCAAGTGGGTGGAATTTCCATCTCCTGGTGAAAGTTGCAAGGGAAGAGGTGGGCCGGGCCTAACAGTGGCCCAGGGAAAAATATGGGTTGTGTATGGTTTCGCTGGAATGGAAGTGGATGACGTGCATTTCTTCGATCTGGCCCAAAAAACATGGGCCCAAGTGGAAACAAGTGGGCTTAAACCAACGGCCCGTAGTGTGTTTTCAACTTGTTTAATTGGGAAACACATAATTGTATATGGTGGGGAAATAGACCCTAGTGACCAAGGTCACATGGGTGCTGGTCAATTTTCAGGTGAGCTTTATGCATTAGACACGGAGACACTATCATGGACGAGGTTGGACGATAAGGTGGAATCAGGTGATCATCCAGGGCCACGTGGGTGGTGCGCATTTGCCGGTGCTAGCCGAGGCAGCCAAGAGGGATTATTAGTGTATGGTGGCAACTCACCTAGCAACGACAGGCTTGATGACATTTTCTTCCTTGCTCTTGCTCAAAGTTAGTTGGTGAATAAATATATTCTGTGTAGTTGCATATGTGTGATCAATTCTAGGTGCATATGTGTGATAAGAGATCAGTATGTCATGTGAACTTAGGTATGTTTATGTGTGAATGTACTTGTGTGCTAGAATAAAATGTCAAAAACAAGAAGTGTGTGATGATTGTTGAATAAATGCGTTTTTTTTTTTTTTTGTTGAAAGAAACAAACTTATAACATTTCATTTATCAAAGCGTGTTTAATACAACCTGGTATTTCAAATAGAACTTGGAAATTAGTTGACAATGAGGCCGCCTTAGCTTAAATATATGTTATTTAAATTATACCGTACTTGTATTTCATAACAAGTATTAAAATTAAAATTATGTAGCAGGAAATGCTCAAATTTATGACAGAAAAAGTGAACTAAAGGAATTTGATGAGTCAAAGGTTGGTGTCCAAGGACTCATAGAAAATGGTGTAACAAAAGTTCCACGCATGTTCTATTGTGAACAATCTAATATCAATCATGGTTCAGTCAATGAATCAAATTCAAAGCTTAGTGTCCCTACAATTGACTTAACAGGAATCCATGATGATCCTGTTTTGAGAGATGAAGTTGTAAGAAAAGTTCAAAATGCAAGTGAGAAATGGGGATTCTTTCAAGTAATAAATCATGGAATTCCAGTTCATGTTTTGGATGAGATGATCAAAGGGACACGTAGATTTCACCAGCAAGATGCCAAGGTGAGGAAGGAGTACTATACCCGTGATCTCACCAAAAAAGTTGTTTATCTTTCCAATTTTACTCTTTATCAAGACCAATCTGCTGATTGGAGGGACACACTTGCATTTTTCTGGGCTCCCGATCCTCCTAAAGCTGATGAACTACCACCGGTTTGCAGGTTTGTCTTAATACTACTTTAA
Protein sequence

>MS.gene039084.t1

MIVVDDVVSVISYIPGVGDFCSVYDCYGGSRGLDQRGILQGARSSHAIAVVGQKVYAFGGEFEPRVPVDNKLHVYDLDTLTWSVTDVSGNTPPPRVGVTMAAVGETIYVFGGRDAEHNELNELYSFDTKTNNWALISSGDVGPPNRSYHSMTADDRRVYVFGGCGVAGRLNDLWAFDVVDGKWVEFPSPGESCKGRGGPGLTVAQGKIWVVYGFAGMEVDDVHFFDLAQKTWAQVETSGLKPTARSVFSTCLIGKHIIVYGGEIDPSDQGHMGAGQFSGELYALDTETLSWTRLDDKVESGDHPGPRGWCAFAGASRGSQEGLLVYGGNSPSNDRLDDIFFLALAQRNAQIYDRKSELKEFDESKVGVQGLIENGVTKVPRMFYCEQSNINHGSVNESNSKLSVPTIDLTGIHDDPVLRDEVVRKVQNASEKWGFFQVINHGIPVHVLDEMIKGTRRFHQQDAKVRKEYYTRDLTKKVVYLSNFTLYQDQSADWRDTLAFFWAPDPPKADELPPVCRFVLILL