Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76479.t1 | XP_003596164.1 | 97.2 | 324 | 9 | 0 | 1 | 324 | 1 | 324 | 1.20E-189 | 672.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76479.t1 | O49326 | 50.8 | 317 | 154 | 2 | 4 | 319 | 150 | 465 | 1.4e-93 | 344.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76479.t1 | G7IH11 | 97.2 | 324 | 9 | 0 | 1 | 324 | 1 | 324 | 8.9e-190 | 672.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051588 | MS.gene76479 | -0.82333 | 1.47E-53 | -1.69E-46 |
| MS.gene054102 | MS.gene76479 | -0.828654 | 7.97E-55 | -1.69E-46 |
| MS.gene054742 | MS.gene76479 | 0.818791 | 1.63E-52 | -1.69E-46 |
| MS.gene055629 | MS.gene76479 | -0.808572 | 2.90E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene76479 | 0.813435 | 2.56E-51 | -1.69E-46 |
| MS.gene056514 | MS.gene76479 | -0.818653 | 1.75E-52 | -1.69E-46 |
| MS.gene056920 | MS.gene76479 | 0.802835 | 4.64E-49 | -1.69E-46 |
| MS.gene057605 | MS.gene76479 | 0.806961 | 6.38E-50 | -1.69E-46 |
| MS.gene059328 | MS.gene76479 | 0.820839 | 5.55E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76479 | MS.gene41019 | PPI |
| MS.gene04366 | MS.gene76479 | PPI |
| MS.gene76479 | MS.gene011357 | PPI |
| MS.gene76479 | MS.gene46439 | PPI |
| MS.gene76479 | MS.gene04131 | PPI |
| MS.gene76479 | MS.gene059960 | PPI |
| MS.gene76479 | MS.gene033319 | PPI |
| MS.gene76479 | MS.gene08076 | PPI |
| MS.gene76479 | MS.gene48301 | PPI |
| MS.gene76479 | MS.gene034731 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76479.t1 | MTR_2g069030 | 97.222 | 324 | 9 | 0 | 1 | 324 | 1 | 324 | 0.0 | 651 |
| MS.gene76479.t1 | MTR_4g109680 | 30.031 | 323 | 199 | 11 | 10 | 320 | 14 | 321 | 2.06e-29 | 118 |
| MS.gene76479.t1 | MTR_1g084120 | 25.460 | 326 | 209 | 9 | 8 | 323 | 15 | 316 | 4.94e-22 | 97.1 |
| MS.gene76479.t1 | MTR_4g132120 | 28.455 | 246 | 162 | 5 | 31 | 272 | 292 | 527 | 4.14e-20 | 91.7 |
| MS.gene76479.t1 | MTR_4g132120 | 29.814 | 161 | 100 | 3 | 6 | 161 | 372 | 524 | 6.08e-11 | 63.9 |
| MS.gene76479.t1 | MTR_4g119100 | 26.860 | 242 | 148 | 9 | 24 | 247 | 158 | 388 | 9.31e-18 | 84.3 |
| MS.gene76479.t1 | MTR_4g119100 | 25.610 | 246 | 168 | 7 | 7 | 240 | 83 | 325 | 3.02e-16 | 79.7 |
| MS.gene76479.t1 | MTR_4g119100 | 25.103 | 243 | 155 | 8 | 59 | 288 | 83 | 311 | 8.42e-15 | 75.5 |
| MS.gene76479.t1 | MTR_4g119100 | 26.860 | 242 | 148 | 9 | 24 | 247 | 158 | 388 | 1.03e-17 | 84.3 |
| MS.gene76479.t1 | MTR_4g119100 | 25.610 | 246 | 168 | 7 | 7 | 240 | 83 | 325 | 3.01e-16 | 80.1 |
| MS.gene76479.t1 | MTR_4g119100 | 25.103 | 243 | 155 | 8 | 59 | 288 | 83 | 311 | 7.86e-15 | 75.5 |
| MS.gene76479.t1 | MTR_4g119100 | 26.860 | 242 | 148 | 9 | 24 | 247 | 157 | 387 | 1.13e-17 | 84.3 |
| MS.gene76479.t1 | MTR_4g119100 | 25.610 | 246 | 168 | 7 | 7 | 240 | 82 | 324 | 2.90e-16 | 80.1 |
| MS.gene76479.t1 | MTR_4g119100 | 25.000 | 244 | 156 | 8 | 59 | 289 | 82 | 311 | 9.10e-15 | 75.5 |
| MS.gene76479.t1 | MTR_1g107265 | 29.433 | 282 | 167 | 12 | 21 | 273 | 69 | 347 | 7.26e-17 | 81.6 |
| MS.gene76479.t1 | MTR_1g107265 | 29.433 | 282 | 167 | 12 | 21 | 273 | 69 | 347 | 8.48e-17 | 81.6 |
| MS.gene76479.t1 | MTR_7g113200 | 30.570 | 193 | 122 | 6 | 7 | 191 | 223 | 411 | 4.77e-16 | 79.3 |
| MS.gene76479.t1 | MTR_7g113200 | 24.727 | 275 | 188 | 6 | 4 | 270 | 170 | 433 | 3.95e-15 | 76.6 |
| MS.gene76479.t1 | MTR_7g113200 | 23.616 | 271 | 172 | 13 | 52 | 310 | 170 | 417 | 8.91e-12 | 66.2 |
| MS.gene76479.t1 | MTR_2g019860 | 26.423 | 246 | 166 | 7 | 7 | 240 | 75 | 317 | 6.27e-16 | 79.0 |
| MS.gene76479.t1 | MTR_2g019860 | 27.136 | 199 | 124 | 6 | 24 | 211 | 150 | 338 | 1.72e-15 | 77.8 |
| MS.gene76479.t1 | MTR_7g113200 | 30.570 | 193 | 122 | 6 | 7 | 191 | 223 | 411 | 6.40e-16 | 78.6 |
| MS.gene76479.t1 | MTR_7g113200 | 24.727 | 275 | 188 | 6 | 4 | 270 | 170 | 433 | 2.17e-15 | 77.0 |
| MS.gene76479.t1 | MTR_1g492850 | 28.244 | 262 | 157 | 10 | 61 | 307 | 8 | 253 | 2.74e-15 | 76.6 |
| MS.gene76479.t1 | MTR_1g492850 | 23.102 | 303 | 180 | 10 | 12 | 284 | 11 | 290 | 2.82e-12 | 67.8 |
| MS.gene76479.t1 | MTR_1g492850 | 27.863 | 262 | 158 | 10 | 61 | 307 | 8 | 253 | 2.80e-15 | 76.6 |
| MS.gene76479.t1 | MTR_1g492850 | 23.102 | 303 | 180 | 10 | 12 | 284 | 11 | 290 | 2.37e-12 | 67.8 |
| MS.gene76479.t1 | MTR_1g090740 | 29.143 | 175 | 117 | 5 | 20 | 191 | 88 | 258 | 2.88e-15 | 76.6 |
| MS.gene76479.t1 | MTR_1g090740 | 23.887 | 247 | 152 | 10 | 59 | 286 | 14 | 243 | 1.69e-11 | 65.1 |
| MS.gene76479.t1 | MTR_1g090740 | 24.000 | 250 | 174 | 4 | 5 | 240 | 12 | 259 | 2.07e-11 | 65.1 |
| MS.gene76479.t1 | MTR_4g007980 | 28.063 | 253 | 145 | 12 | 20 | 241 | 120 | 366 | 2.67e-12 | 67.8 |
| MS.gene76479.t1 | MTR_2g036510 | 25.128 | 195 | 136 | 6 | 55 | 240 | 278 | 471 | 1.04e-11 | 66.2 |
| MS.gene76479.t1 | MTR_2g036510 | 28.956 | 297 | 169 | 16 | 6 | 273 | 281 | 564 | 5.75e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76479.t1 | AT3G07720 | 70.032 | 317 | 95 | 0 | 4 | 320 | 6 | 322 | 4.46e-171 | 478 |
| MS.gene76479.t1 | AT5G48180 | 53.704 | 324 | 148 | 2 | 1 | 324 | 1 | 322 | 1.09e-125 | 363 |
| MS.gene76479.t1 | AT3G16400 | 50.313 | 320 | 157 | 2 | 4 | 322 | 149 | 467 | 1.75e-112 | 334 |
| MS.gene76479.t1 | AT3G16400 | 50.313 | 320 | 157 | 2 | 4 | 322 | 149 | 467 | 1.75e-112 | 334 |
| MS.gene76479.t1 | AT3G16410 | 49.688 | 320 | 159 | 2 | 4 | 322 | 298 | 616 | 2.72e-111 | 336 |
| MS.gene76479.t1 | AT2G33070 | 50.313 | 320 | 157 | 2 | 4 | 322 | 150 | 468 | 6.68e-110 | 328 |
| MS.gene76479.t1 | AT2G33070 | 50.313 | 320 | 157 | 2 | 4 | 322 | 150 | 468 | 6.68e-110 | 328 |
| MS.gene76479.t1 | AT2G33070 | 50.000 | 322 | 157 | 3 | 4 | 322 | 150 | 470 | 5.93e-108 | 323 |
| MS.gene76479.t1 | AT3G16390 | 49.688 | 320 | 156 | 4 | 4 | 322 | 149 | 464 | 8.12e-107 | 320 |
| MS.gene76479.t1 | AT3G16390 | 49.688 | 320 | 156 | 4 | 4 | 322 | 149 | 464 | 8.12e-107 | 320 |
| MS.gene76479.t1 | AT1G54040 | 45.266 | 338 | 162 | 7 | 4 | 322 | 5 | 338 | 1.05e-96 | 290 |
| MS.gene76479.t1 | AT1G54040 | 45.652 | 322 | 153 | 6 | 19 | 322 | 15 | 332 | 1.38e-93 | 281 |
| MS.gene76479.t1 | AT1G54040 | 45.038 | 262 | 123 | 5 | 78 | 322 | 1 | 258 | 6.35e-74 | 229 |
| MS.gene76479.t1 | AT1G18610 | 29.487 | 312 | 197 | 7 | 19 | 320 | 23 | 321 | 2.10e-32 | 126 |
| MS.gene76479.t1 | AT1G18610 | 28.679 | 265 | 163 | 7 | 66 | 320 | 18 | 266 | 3.30e-18 | 85.5 |
| MS.gene76479.t1 | AT1G18610 | 29.487 | 312 | 197 | 7 | 19 | 320 | 23 | 321 | 2.10e-32 | 126 |
| MS.gene76479.t1 | AT1G18610 | 28.679 | 265 | 163 | 7 | 66 | 320 | 18 | 266 | 3.30e-18 | 85.5 |
| MS.gene76479.t1 | AT1G74150 | 27.660 | 329 | 209 | 8 | 8 | 320 | 3 | 318 | 2.81e-28 | 115 |
| MS.gene76479.t1 | AT1G74150 | 27.306 | 271 | 171 | 7 | 62 | 322 | 11 | 265 | 1.97e-16 | 80.5 |
| MS.gene76479.t1 | AT1G74150 | 31.056 | 161 | 104 | 4 | 7 | 161 | 111 | 270 | 3.20e-12 | 67.8 |
| MS.gene76479.t1 | AT1G74150 | 27.660 | 329 | 209 | 8 | 8 | 320 | 3 | 318 | 2.82e-28 | 115 |
| MS.gene76479.t1 | AT1G74150 | 27.306 | 271 | 171 | 7 | 62 | 322 | 11 | 265 | 2.04e-16 | 80.5 |
| MS.gene76479.t1 | AT1G74150 | 31.056 | 161 | 104 | 4 | 7 | 161 | 111 | 270 | 3.29e-12 | 67.8 |
| MS.gene76479.t1 | AT1G74150 | 27.660 | 329 | 209 | 8 | 8 | 320 | 3 | 318 | 3.01e-28 | 115 |
| MS.gene76479.t1 | AT1G74150 | 27.306 | 271 | 171 | 7 | 62 | 322 | 11 | 265 | 2.07e-16 | 80.5 |
| MS.gene76479.t1 | AT1G74150 | 31.056 | 161 | 104 | 4 | 7 | 161 | 111 | 270 | 3.27e-12 | 67.8 |
| MS.gene76479.t1 | AT1G74150 | 27.473 | 273 | 178 | 5 | 56 | 320 | 42 | 302 | 5.19e-23 | 99.8 |
| MS.gene76479.t1 | AT1G74150 | 25.862 | 232 | 161 | 6 | 8 | 230 | 46 | 275 | 2.67e-16 | 80.1 |
| MS.gene76479.t1 | AT1G74150 | 31.056 | 161 | 104 | 4 | 7 | 161 | 95 | 254 | 3.30e-12 | 67.4 |
| MS.gene76479.t1 | AT5G18590 | 28.390 | 236 | 152 | 7 | 24 | 247 | 140 | 370 | 3.83e-19 | 88.6 |
| MS.gene76479.t1 | AT5G18590 | 26.122 | 245 | 168 | 5 | 7 | 240 | 65 | 307 | 6.24e-17 | 82.0 |
| MS.gene76479.t1 | AT5G18590 | 25.347 | 288 | 175 | 11 | 16 | 288 | 32 | 294 | 3.65e-15 | 76.6 |
| MS.gene76479.t1 | AT5G18590 | 28.390 | 236 | 152 | 7 | 24 | 247 | 140 | 370 | 3.83e-19 | 88.6 |
| MS.gene76479.t1 | AT5G18590 | 26.122 | 245 | 168 | 5 | 7 | 240 | 65 | 307 | 6.24e-17 | 82.0 |
| MS.gene76479.t1 | AT5G18590 | 25.347 | 288 | 175 | 11 | 16 | 288 | 32 | 294 | 3.65e-15 | 76.6 |
| MS.gene76479.t1 | AT3G05420 | 26.429 | 280 | 182 | 7 | 4 | 270 | 167 | 435 | 1.46e-17 | 84.0 |
| MS.gene76479.t1 | AT3G05420 | 26.429 | 280 | 182 | 7 | 4 | 270 | 168 | 436 | 1.46e-17 | 84.0 |
| MS.gene76479.t1 | AT4G04670 | 32.298 | 161 | 106 | 2 | 1 | 161 | 356 | 513 | 1.52e-16 | 80.9 |
| MS.gene76479.t1 | AT4G04670 | 26.667 | 225 | 158 | 4 | 19 | 240 | 323 | 543 | 2.54e-16 | 80.5 |
| MS.gene76479.t1 | AT4G04670 | 27.536 | 207 | 134 | 6 | 67 | 269 | 319 | 513 | 3.83e-11 | 64.7 |
| MS.gene76479.t1 | AT5G50310 | 26.103 | 272 | 166 | 8 | 30 | 279 | 94 | 352 | 9.88e-16 | 78.6 |
| MS.gene76479.t1 | AT5G04420 | 28.571 | 231 | 151 | 8 | 20 | 240 | 101 | 327 | 6.61e-15 | 75.9 |
| MS.gene76479.t1 | AT5G04420 | 25.146 | 342 | 217 | 12 | 3 | 322 | 17 | 341 | 4.36e-11 | 63.9 |
| MS.gene76479.t1 | AT5G04420 | 28.571 | 231 | 151 | 8 | 20 | 240 | 101 | 327 | 6.61e-15 | 75.9 |
| MS.gene76479.t1 | AT5G04420 | 25.146 | 342 | 217 | 12 | 3 | 322 | 17 | 341 | 4.36e-11 | 63.9 |
| MS.gene76479.t1 | AT5G04420 | 28.571 | 231 | 151 | 8 | 20 | 240 | 101 | 327 | 6.61e-15 | 75.9 |
| MS.gene76479.t1 | AT5G04420 | 25.146 | 342 | 217 | 12 | 3 | 322 | 17 | 341 | 4.36e-11 | 63.9 |
| MS.gene76479.t1 | AT2G36360 | 27.586 | 261 | 160 | 8 | 61 | 307 | 8 | 253 | 1.48e-14 | 74.7 |
| MS.gene76479.t1 | AT2G36360 | 27.586 | 261 | 160 | 8 | 61 | 307 | 8 | 253 | 1.48e-14 | 74.7 |
| MS.gene76479.t1 | AT2G36360 | 27.969 | 261 | 159 | 8 | 61 | 307 | 8 | 253 | 1.86e-14 | 74.3 |
| MS.gene76479.t1 | AT2G36360 | 27.586 | 261 | 160 | 8 | 61 | 307 | 8 | 253 | 1.89e-14 | 74.3 |
| MS.gene76479.t1 | AT5G27630 | 25.000 | 280 | 186 | 8 | 4 | 270 | 168 | 436 | 2.91e-14 | 73.9 |
| MS.gene76479.t1 | AT5G27630 | 25.000 | 280 | 186 | 8 | 4 | 270 | 168 | 436 | 5.01e-14 | 73.2 |
| MS.gene76479.t1 | AT5G27630 | 25.000 | 280 | 186 | 8 | 4 | 270 | 168 | 436 | 5.32e-14 | 73.2 |
| MS.gene76479.t1 | AT5G27630 | 25.000 | 280 | 186 | 8 | 4 | 270 | 168 | 436 | 7.10e-14 | 72.8 |
| MS.gene76479.t1 | AT5G57360 | 30.526 | 285 | 156 | 16 | 7 | 263 | 279 | 549 | 9.97e-13 | 69.3 |
| MS.gene76479.t1 | AT5G57360 | 29.930 | 284 | 159 | 15 | 7 | 263 | 279 | 549 | 1.04e-12 | 69.3 |
| MS.gene76479.t1 | AT1G51550 | 27.490 | 251 | 147 | 12 | 21 | 241 | 123 | 368 | 1.19e-12 | 68.9 |
| MS.gene76479.t1 | AT2G36360 | 26.667 | 270 | 160 | 9 | 61 | 307 | 8 | 262 | 3.84e-12 | 67.4 |
| MS.gene76479.t1 | AT2G18915 | 29.352 | 293 | 169 | 17 | 7 | 273 | 280 | 560 | 9.05e-12 | 66.2 |
| MS.gene76479.t1 | AT2G18915 | 29.352 | 293 | 169 | 17 | 7 | 273 | 270 | 550 | 9.14e-12 | 66.2 |
| MS.gene76479.t1 | AT1G68050 | 27.928 | 222 | 141 | 11 | 55 | 265 | 287 | 500 | 9.62e-12 | 66.2 |
| MS.gene76479.t1 | AT1G68050 | 26.667 | 345 | 202 | 20 | 7 | 323 | 291 | 612 | 3.85e-11 | 64.3 |
Find 118 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGAAGGCTCAATGATTTA+TGG | 0.247369 | 2.3:-26988265 | MS.gene76479:CDS |
| GGAGAAACCATCTATGTATT+TGG | 0.275442 | 2.3:-26988455 | MS.gene76479:CDS |
| CGTGGGTGGTGCGCATTTGC+CGG | 0.322365 | 2.3:-26987846 | MS.gene76479:CDS |
| TTGACACTAAAACCAACAAT+TGG | 0.329490 | 2.3:-26988388 | MS.gene76479:CDS |
| ACGTGTAACTTGTTATCAAC+GGG | 0.364996 | 2.3:+26988566 | None:intergenic |
| GGGAAACACATAATTGTATA+TGG | 0.366421 | 2.3:-26988005 | MS.gene76479:CDS |
| GCGCACCACCCACGTGGCCC+TGG | 0.395028 | 2.3:+26987855 | None:intergenic |
| TGGTCAGTAGCCGATGTATC+CGG | 0.396432 | 2.3:-26988521 | MS.gene76479:CDS |
| TCTTCCACCAAATACATAGA+TGG | 0.400451 | 2.3:+26988448 | None:intergenic |
| TGATTTCAAGTGGAGATGTT+GGG | 0.404218 | 2.3:-26988361 | MS.gene76479:CDS |
| CCAGCAATGGCGATACTTCA+TGG | 0.407514 | 2.3:-26989743 | None:intergenic |
| CCCTGGGCCACTGTTAGGCC+CGG | 0.416654 | 2.3:+26988170 | None:intergenic |
| AGGAAGGCTCAATGATTTAT+GGG | 0.428980 | 2.3:-26988264 | MS.gene76479:CDS |
| TTGTTTCAGCTTGATCAAAC+AGG | 0.431334 | 2.3:-26988677 | MS.gene76479:intron |
| TTGATTTCAAGTGGAGATGT+TGG | 0.441999 | 2.3:-26988362 | MS.gene76479:CDS |
| ACGTGGAGGCGGTGTGCTCC+CGG | 0.451297 | 2.3:+26988502 | None:intergenic |
| CCCATGTGACCTTGGTCACT+AGG | 0.452252 | 2.3:+26987969 | None:intergenic |
| TGACGTACATTTCTTCGATC+TGG | 0.453055 | 2.3:-26988105 | MS.gene76479:CDS |
| TTGCAAGGGAAGAGGTGGGC+CGG | 0.453359 | 2.3:-26988189 | MS.gene76479:CDS |
| CTGACCATGTCAAGGTATCT+AGG | 0.455547 | 2.3:+26988537 | None:intergenic |
| TGAAATCAAGGCCCAATTGT+TGG | 0.455604 | 2.3:+26988376 | None:intergenic |
| GCCGGGCCTAACAGTGGCCC+AGG | 0.464383 | 2.3:-26988171 | MS.gene76479:CDS |
| TTGGACGATAAGGTGGAATC+AGG | 0.467150 | 2.3:-26987885 | MS.gene76479:CDS |
| TAAGCCCACTTGTTTCCACT+TGG | 0.467507 | 2.3:+26988066 | None:intergenic |
| TGACACTAAAACCAACAATT+GGG | 0.468892 | 2.3:-26988387 | MS.gene76479:CDS |
| TTCGGTGGCTGTGGAGTGGC+AGG | 0.473551 | 2.3:-26988284 | MS.gene76479:CDS |
| TGCAAGGGAAGAGGTGGGCC+GGG | 0.474673 | 2.3:-26988188 | MS.gene76479:CDS |
| ATGGACGAGGTTGGACGATA+AGG | 0.477851 | 2.3:-26987895 | MS.gene76479:CDS |
| CAAGAGGGATTATTAGTGTA+TGG | 0.478956 | 2.3:-26987807 | MS.gene76479:CDS |
| CTTCCCTTGCAACTTTCACC+AGG | 0.479391 | 2.3:+26988200 | None:intergenic |
| GGCGATACTTCATGGCAGTT+GGG | 0.480675 | 2.3:-26989735 | MS.gene76479:CDS |
| TGGCGATACTTCATGGCAGT+TGG | 0.484948 | 2.3:-26989736 | MS.gene76479:CDS |
| AACATCTCCACTTGAAATCA+AGG | 0.485982 | 2.3:+26988364 | None:intergenic |
| TCACATGCTATTGCCGTAGT+AGG | 0.488119 | 2.3:-26988632 | MS.gene76479:CDS |
| AACACATAATTGTATATGGT+GGG | 0.491224 | 2.3:-26988001 | MS.gene76479:CDS |
| GGACAGAAGGTCTATGCATT+CGG | 0.492484 | 2.3:-26988611 | MS.gene76479:CDS |
| TTTATGGGCCTTTGATGTTG+TGG | 0.497159 | 2.3:-26988249 | MS.gene76479:CDS |
| CCCTAGTGACCAAGGTCACA+TGG | 0.498673 | 2.3:-26987970 | MS.gene76479:CDS |
| TGTGTATGGTTTCGCTGGAA+TGG | 0.500991 | 2.3:-26988135 | MS.gene76479:CDS |
| GTGGAATCAGGTGATCATCC+AGG | 0.503333 | 2.3:-26987873 | MS.gene76479:CDS |
| TGGGTGGAATTTCCATCTCC+TGG | 0.503407 | 2.3:-26988218 | MS.gene76479:CDS |
| ATCATCCAGGGCCACGTGGG+TGG | 0.507358 | 2.3:-26987860 | MS.gene76479:CDS |
| TTGCAACTTTCACCAGGAGA+TGG | 0.508173 | 2.3:+26988206 | None:intergenic |
| GACCAAGGTCACATGGGTGC+TGG | 0.513231 | 2.3:-26987963 | MS.gene76479:CDS |
| AACATACACACGTCGGTCAT+CGG | 0.519773 | 2.3:+26988307 | None:intergenic |
| GGTCAGTAGCCGATGTATCC+GGG | 0.521034 | 2.3:-26988520 | MS.gene76479:CDS |
| CCATGTGACCTTGGTCACTA+GGG | 0.525844 | 2.3:+26987970 | None:intergenic |
| AAGCCCACTTGTTTCCACTT+GGG | 0.532207 | 2.3:+26988067 | None:intergenic |
| TGGGTTGTGTATGGTTTCGC+TGG | 0.532785 | 2.3:-26988140 | MS.gene76479:CDS |
| ATGGAGTGGTAGCTACGGTT+AGG | 0.534804 | 2.3:+26988335 | None:intergenic |
| ACGTCGGTCATCGGCAGTCA+TGG | 0.536504 | 2.3:+26988316 | None:intergenic |
| GACACTATCATGGACGAGGT+TGG | 0.537344 | 2.3:-26987904 | MS.gene76479:CDS |
| CACGTGTAACTTGTTATCAA+CGG | 0.539910 | 2.3:+26988565 | None:intergenic |
| TTGGCTGCCTCGGCTAGCAC+CGG | 0.541808 | 2.3:+26987827 | None:intergenic |
| CTTGCCATCCACAACATCAA+AGG | 0.543652 | 2.3:+26988241 | None:intergenic |
| ATAATCCCTCTTGGCTGCCT+CGG | 0.546368 | 2.3:+26987817 | None:intergenic |
| TGGGCCTTTGATGTTGTGGA+TGG | 0.546782 | 2.3:-26988245 | MS.gene76479:CDS |
| GACCAGCACCCATGTGACCT+TGG | 0.549010 | 2.3:+26987961 | None:intergenic |
| GGTGAAAGTTGCAAGGGAAG+AGG | 0.549168 | 2.3:-26988197 | MS.gene76479:CDS |
| TCATCAAGCCTGTCGTTGCT+AGG | 0.553094 | 2.3:+26987774 | None:intergenic |
| GAAAGTTGCAAGGGAAGAGG+TGG | 0.555227 | 2.3:-26988194 | MS.gene76479:CDS |
| AATTGGGCCTTGATTTCAAG+TGG | 0.556457 | 2.3:-26988371 | MS.gene76479:CDS |
| GAAACCATCTATGTATTTGG+TGG | 0.556915 | 2.3:-26988452 | MS.gene76479:CDS |
| AACAAGTTGAAAACACACTA+CGG | 0.558479 | 2.3:+26988033 | None:intergenic |
| GCTAGCCGAGGCAGCCAAGA+GGG | 0.561545 | 2.3:-26987822 | MS.gene76479:CDS |
| TTGATGTTGTGGATGGCAAG+TGG | 0.565683 | 2.3:-26988238 | MS.gene76479:CDS |
| TGGTTTCGCTGGAATGGAAG+TGG | 0.566273 | 2.3:-26988129 | MS.gene76479:CDS |
| ATCTCCTGGTGAAAGTTGCA+AGG | 0.567843 | 2.3:-26988204 | MS.gene76479:CDS |
| CATACACTAATAATCCCTCT+TGG | 0.571128 | 2.3:+26987808 | None:intergenic |
| TGATGTTGTGGATGGCAAGT+GGG | 0.578551 | 2.3:-26988237 | MS.gene76479:CDS |
| ACTTCATGGCAGTTGGGTCA+AGG | 0.582658 | 2.3:-26989729 | MS.gene76479:intron |
| GTGGCTGTGGAGTGGCAGGA+AGG | 0.583072 | 2.3:-26988280 | MS.gene76479:CDS |
| GCAACTCACCTAGCAACGAC+AGG | 0.588373 | 2.3:-26987782 | MS.gene76479:CDS |
| CCGGGCCTAACAGTGGCCCA+GGG | 0.590476 | 2.3:-26988170 | MS.gene76479:CDS |
| AGCACACCGCCTCCACGTGT+TGG | 0.592914 | 2.3:-26988497 | MS.gene76479:CDS |
| AGGTGGGCCGGGCCTAACAG+TGG | 0.595141 | 2.3:-26988177 | MS.gene76479:CDS |
| GAAAACACACTACGGGCCGT+TGG | 0.595615 | 2.3:+26988041 | None:intergenic |
| ACAAGTTGAAAACACACTAC+GGG | 0.597063 | 2.3:+26988034 | None:intergenic |
| AAACACATAATTGTATATGG+TGG | 0.598952 | 2.3:-26988002 | MS.gene76479:CDS |
| GACGAGGTTGGACGATAAGG+TGG | 0.598960 | 2.3:-26987892 | MS.gene76479:CDS |
| ACACATAATTGTATATGGTG+GGG | 0.601078 | 2.3:-26988000 | MS.gene76479:CDS |
| CGGTGTGCTCCCGGATACAT+CGG | 0.602948 | 2.3:+26988511 | None:intergenic |
| GATCAAACAGGAATCTTGCA+AGG | 0.605041 | 2.3:-26988665 | MS.gene76479:CDS |
| GAGTGGTAGCTACGGTTAGG+AGG | 0.607165 | 2.3:+26988338 | None:intergenic |
| ACTAACTTTGAGCAAGAGCA+AGG | 0.608068 | 2.3:+26987742 | None:intergenic |
| AACAAGTGGGCTTAAACCAA+CGG | 0.609427 | 2.3:-26988057 | MS.gene76479:CDS |
| TAGACACGGAGACACTATCA+TGG | 0.609879 | 2.3:-26987914 | MS.gene76479:CDS |
| GTGACACCAACACGTGGAGG+CGG | 0.609943 | 2.3:+26988491 | None:intergenic |
| GCATTTGCCGGTGCTAGCCG+AGG | 0.611791 | 2.3:-26987834 | MS.gene76479:CDS |
| GAAATAGACCCTAGTGACCA+AGG | 0.612642 | 2.3:-26987978 | MS.gene76479:CDS |
| CGGAGACACTATCATGGACG+AGG | 0.615534 | 2.3:-26987908 | MS.gene76479:CDS |
| GGTGTCACGATGGCTGCAGT+TGG | 0.615550 | 2.3:-26988476 | MS.gene76479:CDS |
| TGGAATCAGGTGATCATCCA+GGG | 0.616772 | 2.3:-26987872 | MS.gene76479:CDS |
| ATAGACCTTCTGTCCTACTA+CGG | 0.620524 | 2.3:+26988619 | None:intergenic |
| TTGTTATCAACGGGGACACG+TGG | 0.620860 | 2.3:+26988575 | None:intergenic |
| TCTCCTGGTGAAAGTTGCAA+GGG | 0.623404 | 2.3:-26988203 | MS.gene76479:CDS |
| TGTTGTGGATGGCAAGTGGG+TGG | 0.625429 | 2.3:-26988234 | MS.gene76479:CDS |
| TGGGCCCAAGTGGAAACAAG+TGG | 0.628859 | 2.3:-26988071 | MS.gene76479:CDS |
| GTGATCATCCAGGGCCACGT+GGG | 0.629702 | 2.3:-26987863 | MS.gene76479:CDS |
| GCCATCGTGACACCAACACG+TGG | 0.638626 | 2.3:+26988485 | None:intergenic |
| CAGTCATGGAGTGGTAGCTA+CGG | 0.640561 | 2.3:+26988330 | None:intergenic |
| GGTGATCATCCAGGGCCACG+TGG | 0.641702 | 2.3:-26987864 | MS.gene76479:CDS |
| TATTGCCGTAGTAGGACAGA+AGG | 0.645786 | 2.3:-26988624 | MS.gene76479:CDS |
| ATCGGCTACTGACCATGTCA+AGG | 0.646523 | 2.3:+26988529 | None:intergenic |
| CCTAGTGACCAAGGTCACAT+GGG | 0.649054 | 2.3:-26987969 | MS.gene76479:CDS |
| GGTCATCGGCAGTCATGGAG+TGG | 0.651183 | 2.3:+26988321 | None:intergenic |
| GAGGGATTATTAGTGTATGG+TGG | 0.654652 | 2.3:-26987804 | MS.gene76479:CDS |
| TCCACGTGTTGGTGTCACGA+TGG | 0.660694 | 2.3:-26988486 | MS.gene76479:CDS |
| TGCTAGCCGAGGCAGCCAAG+AGG | 0.662151 | 2.3:-26987823 | MS.gene76479:CDS |
| GGGCCCAAGTGGAAACAAGT+GGG | 0.666793 | 2.3:-26988070 | MS.gene76479:CDS |
| AAAGTTGCAAGGGAAGAGGT+GGG | 0.669531 | 2.3:-26988193 | MS.gene76479:CDS |
| ATCGTGACACCAACACGTGG+AGG | 0.680472 | 2.3:+26988488 | None:intergenic |
| CAGAAGGTCTATGCATTCGG+CGG | 0.680867 | 2.3:-26988608 | MS.gene76479:CDS |
| GCAAATGCGCACCACCCACG+TGG | 0.684596 | 2.3:+26987849 | None:intergenic |
| TGAGCTTTATGCATTAGACA+CGG | 0.693180 | 2.3:-26987928 | MS.gene76479:CDS |
| CGTGTAACTTGTTATCAACG+GGG | 0.719522 | 2.3:+26988567 | None:intergenic |
| ACGACCTAGATACCTTGACA+TGG | 0.737782 | 2.3:-26988541 | MS.gene76479:CDS |
| CACCGAAAACATACACACGT+CGG | 0.744843 | 2.3:+26988300 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAGATATTTTAAGTAATT+AGG | - | chr2.3:26988536-26988555 | MS.gene76479:CDS | 10.0% |
| !! | AAAACAACATATAACTTATA+TGG | + | chr2.3:26988176-26988195 | None:intergenic | 15.0% |
| !! | TTAATTTACCTAAATATCTA+AGG | + | chr2.3:26988514-26988533 | None:intergenic | 15.0% |
| !!! | ATTTCATTTTAACAACATTA+GGG | + | chr2.3:26988768-26988787 | None:intergenic | 15.0% |
| !!! | TATTTCATTTTAACAACATT+AGG | + | chr2.3:26988769-26988788 | None:intergenic | 15.0% |
| !! | ATATTTCTCCTTAGATATTT+AGG | - | chr2.3:26988503-26988522 | MS.gene76479:CDS | 20.0% |
| !! | ATGTTTGTGAAATGAAAAAT+TGG | - | chr2.3:26987903-26987922 | MS.gene76479:CDS | 20.0% |
| !! | CTATCAAATATAAATATCAC+TGG | + | chr2.3:26987820-26987839 | None:intergenic | 20.0% |
| !! | TGTTTGTGAAATGAAAAATT+GGG | - | chr2.3:26987904-26987923 | MS.gene76479:CDS | 20.0% |
| !! | TTTATTTGAGCTTATTTACT+TGG | + | chr2.3:26988303-26988322 | None:intergenic | 20.0% |
| !!! | ACATTTTCATAAGTTGTTTT+CGG | + | chr2.3:26988232-26988251 | None:intergenic | 20.0% |
| !!! | GAACTATAACAATTTTTTCA+TGG | + | chr2.3:26988565-26988584 | None:intergenic | 20.0% |
| !!! | TGTTTTCAACTTGTTTAATT+GGG | - | chr2.3:26989460-26989479 | MS.gene76479:intron | 20.0% |
| !!! | TTTCATTTTAACAACATTAG+GGG | + | chr2.3:26988767-26988786 | None:intergenic | 20.0% |
| !!! | TTTGGATCAACAATATATTT+TGG | - | chr2.3:26988100-26988119 | MS.gene76479:CDS | 20.0% |
| ! | AAACACATAATTGTATATGG+TGG | - | chr2.3:26989483-26989502 | MS.gene76479:intron | 25.0% |
| ! | AACACATAATTGTATATGGT+GGG | - | chr2.3:26989484-26989503 | MS.gene76479:intron | 25.0% |
| ! | AATTGTTATAGTTCATGTAC+AGG | - | chr2.3:26988571-26988590 | MS.gene76479:CDS | 25.0% |
| ! | ATATATTGTTGATCCAAACA+TGG | + | chr2.3:26988098-26988117 | None:intergenic | 25.0% |
| ! | GTTTGTGAAATGAAAAATTG+GGG | - | chr2.3:26987905-26987924 | MS.gene76479:CDS | 25.0% |
| ! | TAACTTATATGGAAACAGTT+TGG | + | chr2.3:26988165-26988184 | None:intergenic | 25.0% |
| ! | TTTGTGAAATGAAAAATTGG+GGG | - | chr2.3:26987906-26987925 | MS.gene76479:CDS | 25.0% |
| !!! | GTGTTTTCAACTTGTTTAAT+TGG | - | chr2.3:26989459-26989478 | MS.gene76479:intron | 25.0% |
| !!! | GTTGTTTTCATACGTTATTT+TGG | - | chr2.3:26988188-26988207 | MS.gene76479:CDS | 25.0% |
| !!! | TACAGTTTTTGTGTTGTTAA+AGG | - | chr2.3:26987876-26987895 | MS.gene76479:CDS | 25.0% |
| ACACATAATTGTATATGGTG+GGG | - | chr2.3:26989485-26989504 | MS.gene76479:intron | 30.0% | |
| CAGAAACTATTCAAGAATAC+TGG | + | chr2.3:26988666-26988685 | None:intergenic | 30.0% | |
| CCTACCTAAACTTAAGTAAA+AGG | + | chr2.3:26988383-26988402 | None:intergenic | 30.0% | |
| GGGAAACACATAATTGTATA+TGG | - | chr2.3:26989480-26989499 | MS.gene76479:intron | 30.0% | |
| TCTAACATCTTACTAAACAG+AGG | - | chr2.3:26988051-26988070 | MS.gene76479:CDS | 30.0% | |
| TGACACTAAAACCAACAATT+GGG | - | chr2.3:26989098-26989117 | MS.gene76479:intron | 30.0% | |
| TGTTAGAGCAAAATTGAAGT+TGG | + | chr2.3:26988038-26988057 | None:intergenic | 30.0% | |
| TTCTACCATATTCTACTAGA+TGG | - | chr2.3:26988716-26988735 | MS.gene76479:intron | 30.0% | |
| TTGACACTAAAACCAACAAT+TGG | - | chr2.3:26989097-26989116 | MS.gene76479:intron | 30.0% | |
| TTGTGAAATGAAAAATTGGG+GGG | - | chr2.3:26987907-26987926 | MS.gene76479:CDS | 30.0% | |
| ! | AACAAGTTGAAAACACACTA+CGG | + | chr2.3:26989455-26989474 | None:intergenic | 30.0% |
| ! | CCTTTTACTTAAGTTTAGGT+AGG | - | chr2.3:26988380-26988399 | MS.gene76479:CDS | 30.0% |
| ! | GGATTTTTCTCTCTAGATTT+AGG | - | chr2.3:26988072-26988091 | MS.gene76479:CDS | 30.0% |
| ! | GTGACCTTTTACTTAAGTTT+AGG | - | chr2.3:26988376-26988395 | MS.gene76479:CDS | 30.0% |
| !! | ATAGCATGGATATTGATTTC+TGG | - | chr2.3:26987998-26988017 | MS.gene76479:CDS | 30.0% |
| AACATCTCCACTTGAAATCA+AGG | + | chr2.3:26989124-26989143 | None:intergenic | 35.0% | |
| AGGAAGGCTCAATGATTTAT+GGG | - | chr2.3:26989221-26989240 | MS.gene76479:intron | 35.0% | |
| CAAGAGGGATTATTAGTGTA+TGG | - | chr2.3:26989678-26989697 | MS.gene76479:intron | 35.0% | |
| CATACACTAATAATCCCTCT+TGG | + | chr2.3:26989680-26989699 | None:intergenic | 35.0% | |
| CATGTACAGGCTAATAGTTA+AGG | - | chr2.3:26988584-26988603 | MS.gene76479:CDS | 35.0% | |
| GAAACCATCTATGTATTTGG+TGG | - | chr2.3:26989033-26989052 | MS.gene76479:intron | 35.0% | |
| GAATGCCATCTAGTAGAATA+TGG | + | chr2.3:26988724-26988743 | None:intergenic | 35.0% | |
| GGAACAATTAAGGATCTGTT+TGG | + | chr2.3:26988331-26988350 | None:intergenic | 35.0% | |
| GGAGAAACCATCTATGTATT+TGG | - | chr2.3:26989030-26989049 | MS.gene76479:intron | 35.0% | |
| TAAGTGCTAGTAAGACTGTT+TGG | + | chr2.3:26988279-26988298 | None:intergenic | 35.0% | |
| TAATTGTTCCTGCAGATGTA+AGG | - | chr2.3:26988341-26988360 | MS.gene76479:CDS | 35.0% | |
| TACATCTGCAGGAACAATTA+AGG | + | chr2.3:26988341-26988360 | None:intergenic | 35.0% | |
| TCTTCCACCAAATACATAGA+TGG | + | chr2.3:26989040-26989059 | None:intergenic | 35.0% | |
| TTGTTTCAGCTTGATCAAAC+AGG | - | chr2.3:26988808-26988827 | MS.gene76479:intron | 35.0% | |
| ! | ACAAGTTGAAAACACACTAC+GGG | + | chr2.3:26989454-26989473 | None:intergenic | 35.0% |
| ! | GGAAAAATATGGGTTGTGTA+TGG | - | chr2.3:26989336-26989355 | MS.gene76479:intron | 35.0% |
| ! | TGAGCTTTATGCATTAGACA+CGG | - | chr2.3:26989557-26989576 | MS.gene76479:intron | 35.0% |
| ! | TGATTTCAAGTGGAGATGTT+GGG | - | chr2.3:26989124-26989143 | MS.gene76479:intron | 35.0% |
| ! | TTGATTTCAAGTGGAGATGT+TGG | - | chr2.3:26989123-26989142 | MS.gene76479:intron | 35.0% |
| !! | ACGTGTAACTTGTTATCAAC+GGG | + | chr2.3:26988922-26988941 | None:intergenic | 35.0% |
| !! | CACGTGTAACTTGTTATCAA+CGG | + | chr2.3:26988923-26988942 | None:intergenic | 35.0% |
| !!! | ACGTTATTTTGGAGAGCTTA+TGG | - | chr2.3:26988199-26988218 | MS.gene76479:CDS | 35.0% |
| AATTGGGCCTTGATTTCAAG+TGG | - | chr2.3:26989114-26989133 | MS.gene76479:intron | 40.0% | |
| ATAGACCTTCTGTCCTACTA+CGG | + | chr2.3:26988869-26988888 | None:intergenic | 40.0% | |
| CAGGAAGGCTCAATGATTTA+TGG | - | chr2.3:26989220-26989239 | MS.gene76479:intron | 40.0% | |
| CATGCTATTGAAAACCTGAG+TGG | + | chr2.3:26987986-26988005 | None:intergenic | 40.0% | |
| CTCTAGATTTAGGCCATGTT+TGG | - | chr2.3:26988082-26988101 | MS.gene76479:CDS | 40.0% | |
| GAGGGATTATTAGTGTATGG+TGG | - | chr2.3:26989681-26989700 | MS.gene76479:intron | 40.0% | |
| GATCAAACAGGAATCTTGCA+AGG | - | chr2.3:26988820-26988839 | MS.gene76479:intron | 40.0% | |
| TGAAATCAAGGCCCAATTGT+TGG | + | chr2.3:26989112-26989131 | None:intergenic | 40.0% | |
| TGACGTACATTTCTTCGATC+TGG | - | chr2.3:26989380-26989399 | MS.gene76479:intron | 40.0% | |
| TTTATGGGCCTTTGATGTTG+TGG | - | chr2.3:26989236-26989255 | MS.gene76479:intron | 40.0% | |
| ! | AACAAGTGGGCTTAAACCAA+CGG | - | chr2.3:26989428-26989447 | MS.gene76479:intron | 40.0% |
| ! | ACACAACCCATATTTTTCCC+TGG | + | chr2.3:26989335-26989354 | None:intergenic | 40.0% |
| ! | CACAACCCATATTTTTCCCT+GGG | + | chr2.3:26989334-26989353 | None:intergenic | 40.0% |
| ! | CACTCAGGTTTTCAATAGCA+TGG | - | chr2.3:26987984-26988003 | MS.gene76479:CDS | 40.0% |
| !! | CGTGTAACTTGTTATCAACG+GGG | + | chr2.3:26988921-26988940 | None:intergenic | 40.0% |
| !! | GAGTGAAGAAGTATCTCGTA+CGG | + | chr2.3:26988459-26988478 | None:intergenic | 40.0% |
| AAAGTTGCAAGGGAAGAGGT+GGG | - | chr2.3:26989292-26989311 | MS.gene76479:intron | 45.0% | |
| AACATACACACGTCGGTCAT+CGG | + | chr2.3:26989181-26989200 | None:intergenic | 45.0% | |
| AAGCCCACTTGTTTCCACTT+GGG | + | chr2.3:26989421-26989440 | None:intergenic | 45.0% | |
| ACGACCTAGATACCTTGACA+TGG | - | chr2.3:26988944-26988963 | MS.gene76479:intron | 45.0% | |
| AGTGGCCCAGGGAAAAATAT+GGG | - | chr2.3:26989326-26989345 | MS.gene76479:intron | 45.0% | |
| ATCTCCTGGTGAAAGTTGCA+AGG | - | chr2.3:26989281-26989300 | MS.gene76479:intron | 45.0% | |
| CACCGAAAACATACACACGT+CGG | + | chr2.3:26989188-26989207 | None:intergenic | 45.0% | |
| CGATCTGGCCCAAAAAACAT+GGG | - | chr2.3:26989395-26989414 | MS.gene76479:intron | 45.0% | |
| CTTGCCATCCACAACATCAA+AGG | + | chr2.3:26989247-26989266 | None:intergenic | 45.0% | |
| GAAATAGACCCTAGTGACCA+AGG | - | chr2.3:26989507-26989526 | MS.gene76479:intron | 45.0% | |
| GGACAGAAGGTCTATGCATT+CGG | - | chr2.3:26988874-26988893 | MS.gene76479:intron | 45.0% | |
| TAAGCCCACTTGTTTCCACT+TGG | + | chr2.3:26989422-26989441 | None:intergenic | 45.0% | |
| TAGACACGGAGACACTATCA+TGG | - | chr2.3:26989571-26989590 | MS.gene76479:intron | 45.0% | |
| TATTGCCGTAGTAGGACAGA+AGG | - | chr2.3:26988861-26988880 | MS.gene76479:intron | 45.0% | |
| TCACATGCTATTGCCGTAGT+AGG | - | chr2.3:26988853-26988872 | MS.gene76479:intron | 45.0% | |
| TCGATCTGGCCCAAAAAACA+TGG | - | chr2.3:26989394-26989413 | MS.gene76479:intron | 45.0% | |
| TCTCCTGGTGAAAGTTGCAA+GGG | - | chr2.3:26989282-26989301 | MS.gene76479:intron | 45.0% | |
| TGATGTTGTGGATGGCAAGT+GGG | - | chr2.3:26989248-26989267 | MS.gene76479:intron | 45.0% | |
| TGGAATCAGGTGATCATCCA+GGG | - | chr2.3:26989613-26989632 | MS.gene76479:intron | 45.0% | |
| TGTGTATGGTTTCGCTGGAA+TGG | - | chr2.3:26989350-26989369 | MS.gene76479:intron | 45.0% | |
| TTCCTGCAGATGTAAGGATG+CGG | - | chr2.3:26988347-26988366 | MS.gene76479:CDS | 45.0% | |
| TTGATGTTGTGGATGGCAAG+TGG | - | chr2.3:26989247-26989266 | MS.gene76479:intron | 45.0% | |
| TTGCAACTTTCACCAGGAGA+TGG | + | chr2.3:26989282-26989301 | None:intergenic | 45.0% | |
| TTGGACGATAAGGTGGAATC+AGG | - | chr2.3:26989600-26989619 | MS.gene76479:intron | 45.0% | |
| ! | CTGACCATGTCAAGGTATCT+AGG | + | chr2.3:26988951-26988970 | None:intergenic | 45.0% |
| ! | CTGATAGTGATAGACCACTC+AGG | - | chr2.3:26987969-26987988 | MS.gene76479:CDS | 45.0% |
| ! | GACCGACGTGTGTATGTTTT+CGG | - | chr2.3:26989183-26989202 | MS.gene76479:intron | 45.0% |
| !!! | ATGGGTGCTGGTCAATTTTC+AGG | - | chr2.3:26989534-26989553 | MS.gene76479:intron | 45.0% |
| !!! | CACTTGGGCCCATGTTTTTT+GGG | + | chr2.3:26989406-26989425 | None:intergenic | 45.0% |
| ACTTCATGGCAGTTGGGTCA+AGG | - | chr2.3:26987756-26987775 | MS.gene76479:CDS | 50.0% | |
| ATAATCCCTCTTGGCTGCCT+CGG | + | chr2.3:26989671-26989690 | None:intergenic | 50.0% | |
| ATCGGCTACTGACCATGTCA+AGG | + | chr2.3:26988959-26988978 | None:intergenic | 50.0% | |
| ATGGACGAGGTTGGACGATA+AGG | - | chr2.3:26989590-26989609 | MS.gene76479:intron | 50.0% | |
| ATGGAGTGGTAGCTACGGTT+AGG | + | chr2.3:26989153-26989172 | None:intergenic | 50.0% | |
| CAGAAGGTCTATGCATTCGG+CGG | - | chr2.3:26988877-26988896 | MS.gene76479:intron | 50.0% | |
| CAGTCATGGAGTGGTAGCTA+CGG | + | chr2.3:26989158-26989177 | None:intergenic | 50.0% | |
| CAGTGGCCCAGGGAAAAATA+TGG | - | chr2.3:26989325-26989344 | MS.gene76479:intron | 50.0% | |
| CCAAAAAACATGGGCCCAAG+TGG | - | chr2.3:26989404-26989423 | MS.gene76479:intron | 50.0% | |
| CCATGTGACCTTGGTCACTA+GGG | + | chr2.3:26989518-26989537 | None:intergenic | 50.0% | |
| CCTAGTGACCAAGGTCACAT+GGG | - | chr2.3:26989516-26989535 | MS.gene76479:intron | 50.0% | |
| CTTCCCTTGCAACTTTCACC+AGG | + | chr2.3:26989288-26989307 | None:intergenic | 50.0% | |
| GAAAGTTGCAAGGGAAGAGG+TGG | - | chr2.3:26989291-26989310 | MS.gene76479:intron | 50.0% | |
| GACACTATCATGGACGAGGT+TGG | - | chr2.3:26989581-26989600 | MS.gene76479:intron | 50.0% | |
| GGCGATACTTCATGGCAGTT+GGG | - | chr2.3:26987750-26987769 | MS.gene76479:CDS | 50.0% | |
| GGTGAAAGTTGCAAGGGAAG+AGG | - | chr2.3:26989288-26989307 | MS.gene76479:intron | 50.0% | |
| GTGGAATCAGGTGATCATCC+AGG | - | chr2.3:26989612-26989631 | MS.gene76479:intron | 50.0% | |
| TCATCAAGCCTGTCGTTGCT+AGG | + | chr2.3:26989714-26989733 | None:intergenic | 50.0% | |
| TCGTACGGTCTACAGACTCA+CGG | + | chr2.3:26988444-26988463 | None:intergenic | 50.0% | |
| TGGCGATACTTCATGGCAGT+TGG | - | chr2.3:26987749-26987768 | MS.gene76479:CDS | 50.0% | |
| TGGGCCTTTGATGTTGTGGA+TGG | - | chr2.3:26989240-26989259 | MS.gene76479:intron | 50.0% | |
| TGGGTGGAATTTCCATCTCC+TGG | - | chr2.3:26989267-26989286 | MS.gene76479:intron | 50.0% | |
| TGGGTTGTGTATGGTTTCGC+TGG | - | chr2.3:26989345-26989364 | MS.gene76479:intron | 50.0% | |
| TGGTCAGTAGCCGATGTATC+CGG | - | chr2.3:26988964-26988983 | MS.gene76479:intron | 50.0% | |
| TGGTTTCGCTGGAATGGAAG+TGG | - | chr2.3:26989356-26989375 | MS.gene76479:intron | 50.0% | |
| TTGTTATCAACGGGGACACG+TGG | + | chr2.3:26988913-26988932 | None:intergenic | 50.0% | |
| ! | CGACGTGTGTATGTTTTCGG+TGG | - | chr2.3:26989186-26989205 | MS.gene76479:intron | 50.0% |
| ! | GTGTATGTTTTCGGTGGCTG+TGG | - | chr2.3:26989192-26989211 | MS.gene76479:intron | 50.0% |
| ! | TTTTTCCCTGGGCCACTGTT+AGG | + | chr2.3:26989323-26989342 | None:intergenic | 50.0% |
| !!! | CCACTTGGGCCCATGTTTTT+TGG | + | chr2.3:26989407-26989426 | None:intergenic | 50.0% |
| ATCGTGACACCAACACGTGG+AGG | + | chr2.3:26989000-26989019 | None:intergenic | 55.0% | |
| CCCATGTGACCTTGGTCACT+AGG | + | chr2.3:26989519-26989538 | None:intergenic | 55.0% | |
| CCCTAGTGACCAAGGTCACA+TGG | - | chr2.3:26989515-26989534 | MS.gene76479:intron | 55.0% | |
| CGGAGACACTATCATGGACG+AGG | - | chr2.3:26989577-26989596 | MS.gene76479:intron | 55.0% | |
| CTCCGCATCCTTACATCTGC+AGG | + | chr2.3:26988352-26988371 | None:intergenic | 55.0% | |
| CTGCAGATGTAAGGATGCGG+AGG | - | chr2.3:26988350-26988369 | MS.gene76479:CDS | 55.0% | |
| GAAAACACACTACGGGCCGT+TGG | + | chr2.3:26989447-26989466 | None:intergenic | 55.0% | |
| GACGAGGTTGGACGATAAGG+TGG | - | chr2.3:26989593-26989612 | MS.gene76479:intron | 55.0% | |
| GAGTGGTAGCTACGGTTAGG+AGG | + | chr2.3:26989150-26989169 | None:intergenic | 55.0% | |
| GCAACTCACCTAGCAACGAC+AGG | - | chr2.3:26989703-26989722 | MS.gene76479:intron | 55.0% | |
| GGGCCCAAGTGGAAACAAGT+GGG | - | chr2.3:26989415-26989434 | MS.gene76479:intron | 55.0% | |
| GGTCAGTAGCCGATGTATCC+GGG | - | chr2.3:26988965-26988984 | MS.gene76479:intron | 55.0% | |
| TGGGCCCAAGTGGAAACAAG+TGG | - | chr2.3:26989414-26989433 | MS.gene76479:intron | 55.0% | |
| TGTTGTGGATGGCAAGTGGG+TGG | - | chr2.3:26989251-26989270 | MS.gene76479:intron | 55.0% | |
| ! | TGTTTTCGGTGGCTGTGGAG+TGG | - | chr2.3:26989197-26989216 | MS.gene76479:intron | 55.0% |
| !! | TCCACGTGTTGGTGTCACGA+TGG | - | chr2.3:26988999-26989018 | MS.gene76479:intron | 55.0% |
| ACGTCGGTCATCGGCAGTCA+TGG | + | chr2.3:26989172-26989191 | None:intergenic | 60.0% | |
| CGGTGTGCTCCCGGATACAT+CGG | + | chr2.3:26988977-26988996 | None:intergenic | 60.0% | |
| GACCAAGGTCACATGGGTGC+TGG | - | chr2.3:26989522-26989541 | MS.gene76479:intron | 60.0% | |
| GACCAGCACCCATGTGACCT+TGG | + | chr2.3:26989527-26989546 | None:intergenic | 60.0% | |
| GCCATCGTGACACCAACACG+TGG | + | chr2.3:26989003-26989022 | None:intergenic | 60.0% | |
| GGTCATCGGCAGTCATGGAG+TGG | + | chr2.3:26989167-26989186 | None:intergenic | 60.0% | |
| GTGACACCAACACGTGGAGG+CGG | + | chr2.3:26988997-26989016 | None:intergenic | 60.0% | |
| GTGATCATCCAGGGCCACGT+GGG | - | chr2.3:26989622-26989641 | MS.gene76479:intron | 60.0% | |
| TTGCAAGGGAAGAGGTGGGC+CGG | - | chr2.3:26989296-26989315 | MS.gene76479:intron | 60.0% | |
| ! | GGTGTCACGATGGCTGCAGT+TGG | - | chr2.3:26989009-26989028 | MS.gene76479:intron | 60.0% |
| AGCACACCGCCTCCACGTGT+TGG | - | chr2.3:26988988-26989007 | MS.gene76479:intron | 65.0% | |
| ATCATCCAGGGCCACGTGGG+TGG | - | chr2.3:26989625-26989644 | MS.gene76479:intron | 65.0% | |
| CGTGGGTGGTGCGCATTTGC+CGG | - | chr2.3:26989639-26989658 | MS.gene76479:intron | 65.0% | |
| GCAAATGCGCACCACCCACG+TGG | + | chr2.3:26989639-26989658 | None:intergenic | 65.0% | |
| GCTAGCCGAGGCAGCCAAGA+GGG | - | chr2.3:26989663-26989682 | MS.gene76479:intron | 65.0% | |
| GGTGATCATCCAGGGCCACG+TGG | - | chr2.3:26989621-26989640 | MS.gene76479:intron | 65.0% | |
| GTGGCTGTGGAGTGGCAGGA+AGG | - | chr2.3:26989205-26989224 | MS.gene76479:intron | 65.0% | |
| TGCAAGGGAAGAGGTGGGCC+GGG | - | chr2.3:26989297-26989316 | MS.gene76479:intron | 65.0% | |
| TGCTAGCCGAGGCAGCCAAG+AGG | - | chr2.3:26989662-26989681 | MS.gene76479:intron | 65.0% | |
| TTCGGTGGCTGTGGAGTGGC+AGG | - | chr2.3:26989201-26989220 | MS.gene76479:intron | 65.0% | |
| TTGGCTGCCTCGGCTAGCAC+CGG | + | chr2.3:26989661-26989680 | None:intergenic | 65.0% | |
| ! | GCATTTGCCGGTGCTAGCCG+AGG | - | chr2.3:26989651-26989670 | MS.gene76479:intron | 65.0% |
| ACGTGGAGGCGGTGTGCTCC+CGG | + | chr2.3:26988986-26989005 | None:intergenic | 70.0% | |
| AGGTGGGCCGGGCCTAACAG+TGG | - | chr2.3:26989308-26989327 | MS.gene76479:intron | 70.0% | |
| CCCTGGGCCACTGTTAGGCC+CGG | + | chr2.3:26989318-26989337 | None:intergenic | 70.0% | |
| CCGGGCCTAACAGTGGCCCA+GGG | - | chr2.3:26989315-26989334 | MS.gene76479:intron | 70.0% | |
| GCCGGGCCTAACAGTGGCCC+AGG | - | chr2.3:26989314-26989333 | MS.gene76479:intron | 75.0% | |
| ! | GCGCACCACCCACGTGGCCC+TGG | + | chr2.3:26989633-26989652 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 26987748 | 26989759 | 26987748 | ID=MS.gene76479 |
| chr2.3 | mRNA | 26987748 | 26989759 | 26987748 | ID=MS.gene76479.t1;Parent=MS.gene76479 |
| chr2.3 | exon | 26989730 | 26989759 | 26989730 | ID=MS.gene76479.t1.exon1;Parent=MS.gene76479.t1 |
| chr2.3 | CDS | 26989730 | 26989759 | 26989730 | ID=cds.MS.gene76479.t1;Parent=MS.gene76479.t1 |
| chr2.3 | exon | 26987748 | 26988690 | 26987748 | ID=MS.gene76479.t1.exon2;Parent=MS.gene76479.t1 |
| chr2.3 | CDS | 26987748 | 26988690 | 26987748 | ID=cds.MS.gene76479.t1;Parent=MS.gene76479.t1 |
| Gene Sequence |
| Protein sequence |
