Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47332.t1 | XP_013467901.1 | 60.7 | 522 | 172 | 8 | 29 | 529 | 51 | 560 | 1.10E-158 | 570.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47332.t1 | Q9FLH8 | 68.8 | 330 | 98 | 3 | 199 | 527 | 9 | 334 | 2.9e-123 | 443.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47332.t1 | A0A072VKK1 | 60.7 | 522 | 172 | 8 | 29 | 529 | 51 | 560 | 7.9e-159 | 570.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056386 | MS.gene47332 | PPI |
| MS.gene47332 | MS.gene052011 | PPI |
| MS.gene28335 | MS.gene47332 | PPI |
| MS.gene47332 | MS.gene98726 | PPI |
| MS.gene46881 | MS.gene47332 | PPI |
| MS.gene85276 | MS.gene47332 | PPI |
| MS.gene032177 | MS.gene47332 | PPI |
| MS.gene47332 | MS.gene003877 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47332.t1 | MTR_1g101950 | 82.991 | 341 | 53 | 3 | 194 | 533 | 4 | 340 | 0.0 | 559 |
| MS.gene47332.t1 | MTR_1g057810 | 60.728 | 522 | 172 | 8 | 29 | 529 | 51 | 560 | 0.0 | 559 |
| MS.gene47332.t1 | MTR_1g105150 | 58.429 | 522 | 170 | 9 | 29 | 529 | 51 | 546 | 0.0 | 523 |
| MS.gene47332.t1 | MTR_6g089480 | 76.656 | 317 | 70 | 2 | 221 | 536 | 1 | 314 | 1.09e-172 | 490 |
| MS.gene47332.t1 | MTR_1g069490 | 62.704 | 429 | 129 | 6 | 107 | 533 | 2 | 401 | 5.56e-172 | 492 |
| MS.gene47332.t1 | MTR_6g089480 | 77.455 | 275 | 58 | 2 | 221 | 494 | 1 | 272 | 1.32e-148 | 427 |
| MS.gene47332.t1 | MTR_6g089480 | 78.022 | 273 | 56 | 2 | 221 | 492 | 1 | 270 | 1.82e-148 | 427 |
| MS.gene47332.t1 | MTR_1g069745 | 76.042 | 288 | 57 | 2 | 249 | 536 | 16 | 291 | 2.85e-147 | 425 |
| MS.gene47332.t1 | MTR_5g079460 | 66.871 | 326 | 101 | 5 | 207 | 529 | 58 | 379 | 7.83e-142 | 414 |
| MS.gene47332.t1 | MTR_1g076850 | 57.862 | 318 | 128 | 4 | 214 | 530 | 8 | 320 | 2.23e-126 | 373 |
| MS.gene47332.t1 | MTR_2g098950 | 57.812 | 320 | 129 | 4 | 212 | 530 | 12 | 326 | 2.68e-124 | 367 |
| MS.gene47332.t1 | MTR_4g067310 | 58.125 | 320 | 128 | 3 | 212 | 530 | 13 | 327 | 3.65e-124 | 367 |
| MS.gene47332.t1 | MTR_7g075860 | 58.307 | 319 | 127 | 3 | 214 | 529 | 41 | 356 | 3.15e-123 | 366 |
| MS.gene47332.t1 | MTR_1g054730 | 53.988 | 326 | 110 | 3 | 205 | 530 | 102 | 387 | 9.95e-99 | 304 |
| MS.gene47332.t1 | MTR_1g054730 | 53.425 | 73 | 22 | 2 | 32 | 92 | 86 | 158 | 4.42e-13 | 71.2 |
| MS.gene47332.t1 | MTR_0046s0180 | 79.612 | 103 | 21 | 0 | 428 | 530 | 7 | 109 | 4.54e-52 | 173 |
| MS.gene47332.t1 | MTR_5g044990 | 27.616 | 344 | 214 | 6 | 214 | 525 | 210 | 550 | 4.12e-36 | 142 |
| MS.gene47332.t1 | MTR_8g096570 | 49.367 | 158 | 66 | 3 | 20 | 164 | 76 | 232 | 8.63e-35 | 139 |
| MS.gene47332.t1 | MTR_4g019165 | 28.814 | 354 | 209 | 7 | 214 | 524 | 93 | 446 | 2.13e-33 | 132 |
| MS.gene47332.t1 | MTR_1g069480 | 50.442 | 113 | 40 | 5 | 48 | 145 | 4 | 115 | 3.82e-20 | 86.3 |
| MS.gene47332.t1 | MTR_0046s0210 | 38.750 | 160 | 62 | 6 | 140 | 270 | 1 | 153 | 4.73e-16 | 75.9 |
| MS.gene47332.t1 | MTR_1g071270 | 38.931 | 131 | 44 | 5 | 92 | 187 | 10 | 139 | 7.16e-12 | 64.3 |
| MS.gene47332.t1 | MTR_1g070375 | 25.352 | 284 | 180 | 8 | 252 | 517 | 125 | 394 | 4.26e-11 | 65.5 |
| MS.gene47332.t1 | MTR_1g071290 | 60.465 | 43 | 17 | 0 | 50 | 92 | 7 | 49 | 9.51e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47332.t1 | AT5G51830 | 68.788 | 330 | 98 | 3 | 199 | 527 | 9 | 334 | 2.09e-157 | 452 |
| MS.gene47332.t1 | AT5G51830 | 68.788 | 330 | 98 | 3 | 199 | 527 | 9 | 334 | 2.09e-157 | 452 |
| MS.gene47332.t1 | AT1G66430 | 61.864 | 354 | 124 | 5 | 183 | 529 | 28 | 377 | 1.07e-146 | 427 |
| MS.gene47332.t1 | AT4G10260 | 59.807 | 311 | 119 | 4 | 214 | 523 | 6 | 311 | 1.30e-124 | 368 |
| MS.gene47332.t1 | AT1G06030 | 56.287 | 334 | 131 | 5 | 198 | 530 | 4 | 323 | 3.49e-124 | 367 |
| MS.gene47332.t1 | AT2G31390 | 56.790 | 324 | 134 | 4 | 208 | 530 | 3 | 321 | 3.31e-122 | 362 |
| MS.gene47332.t1 | AT3G59480 | 55.556 | 324 | 138 | 4 | 205 | 527 | 1 | 319 | 1.43e-120 | 358 |
| MS.gene47332.t1 | AT1G06020 | 55.799 | 319 | 135 | 3 | 213 | 530 | 9 | 322 | 8.76e-120 | 357 |
| MS.gene47332.t1 | AT1G50390 | 46.471 | 170 | 60 | 1 | 361 | 530 | 1 | 139 | 6.34e-43 | 150 |
| MS.gene47332.t1 | AT3G54090 | 29.477 | 363 | 212 | 8 | 205 | 524 | 94 | 455 | 2.64e-36 | 141 |
| MS.gene47332.t1 | AT1G69200 | 27.439 | 328 | 206 | 5 | 214 | 510 | 206 | 532 | 9.49e-34 | 135 |
| MS.gene47332.t1 | AT5G63540 | 44.295 | 149 | 69 | 3 | 29 | 164 | 113 | 260 | 2.11e-26 | 114 |
| MS.gene47332.t1 | AT5G63540 | 44.295 | 149 | 69 | 3 | 29 | 164 | 113 | 260 | 3.04e-26 | 113 |
Find 117 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTGGAGATTCGTTAAA+TGG | 0.186789 | 1.1:-46316326 | MS.gene47332:CDS |
| TAGCGAAATATAATGCATTT+TGG | 0.194932 | 1.1:+46312818 | None:intergenic |
| CCTAGAAATATTACAGTATT+GGG | 0.198757 | 1.1:-46315781 | MS.gene47332:CDS |
| CCCAATACTGTAATATTTCT+AGG | 0.263995 | 1.1:+46315781 | None:intergenic |
| TGCGGCGCCTTGTGGATTAA+AGG | 0.268903 | 1.1:-46315963 | MS.gene47332:intron |
| TTCTAATGCCAGAACCAAAT+TGG | 0.269138 | 1.1:-46313963 | MS.gene47332:CDS |
| CGATTAGAAGCTTGAGATTA+GGG | 0.284707 | 1.1:+46313342 | None:intergenic |
| TAGGCTAAAATATTCCATTA+TGG | 0.294033 | 1.1:-46313743 | MS.gene47332:CDS |
| AAGTGTAACAAAAGCCAATT+TGG | 0.299073 | 1.1:+46313949 | None:intergenic |
| CGAAGTCCACACACCACTTT+TGG | 0.300993 | 1.1:+46314998 | None:intergenic |
| TGGCTTTGATGTTTCCAAAA+AGG | 0.302631 | 1.1:-46316306 | MS.gene47332:CDS |
| TAGGTTGGAGCAGATGAATT+TGG | 0.306305 | 1.1:-46314046 | MS.gene47332:CDS |
| ATGCCAACTGCCACGTTTGC+AGG | 0.308650 | 1.1:+46314929 | None:intergenic |
| TCCTAGTGCTGGTATGCTTC+TGG | 0.312631 | 1.1:-46313888 | MS.gene47332:CDS |
| AGGTTGGAGCAGATGAATTT+GGG | 0.318393 | 1.1:-46314045 | MS.gene47332:CDS |
| CGAATTTGAGATTGGCACTA+TGG | 0.327098 | 1.1:-46313628 | MS.gene47332:CDS |
| CAGTCTTTGCATCAAATTGC+AGG | 0.328019 | 1.1:+46312728 | None:intergenic |
| AATACAACTTCATCATCATT+AGG | 0.330343 | 1.1:+46313380 | None:intergenic |
| GATGGTACTCAAAGAGTATA+TGG | 0.355095 | 1.1:-46316022 | MS.gene47332:CDS |
| AGTGGACTGGTTGTTTGTTT+TGG | 0.362156 | 1.1:-46315043 | MS.gene47332:CDS |
| GCATACCAGCACTAGGATTT+CGG | 0.364200 | 1.1:+46313894 | None:intergenic |
| CGATGGTCCCTTCATATTGC+AGG | 0.369500 | 1.1:-46316186 | MS.gene47332:intron |
| AACAAAAGCCAATTTGGTTC+TGG | 0.371720 | 1.1:+46313955 | None:intergenic |
| CAAAGTAATGTTGATACATC+TGG | 0.377691 | 1.1:-46313998 | MS.gene47332:CDS |
| ACGATTAGAAGCTTGAGATT+AGG | 0.378605 | 1.1:+46313341 | None:intergenic |
| TTTCGAGCAGCCTTGGCATA+TGG | 0.395879 | 1.1:+46313605 | None:intergenic |
| TCCTAGAAATATTACAGTAT+TGG | 0.396135 | 1.1:-46315782 | MS.gene47332:CDS |
| GCAGTTGGCATCTCTAAGTT+GGG | 0.396668 | 1.1:-46314917 | MS.gene47332:CDS |
| GAAATGGTATAATGAGCATA+TGG | 0.397108 | 1.1:-46313586 | MS.gene47332:CDS |
| TCAAACTCATGGAACCATAA+TGG | 0.399197 | 1.1:+46313729 | None:intergenic |
| TCTGATAATCTCATAATAGA+AGG | 0.415092 | 1.1:-46315079 | MS.gene47332:CDS |
| CATAGTGCCAATCTCAAATT+CGG | 0.415637 | 1.1:+46313629 | None:intergenic |
| AGGGACCATCGAGAGTAGTT+TGG | 0.418218 | 1.1:+46316198 | None:intergenic |
| GGCAGTTGGCATCTCTAAGT+TGG | 0.428328 | 1.1:-46314918 | MS.gene47332:CDS |
| ATTATCAATATCGGTTGTAC+AGG | 0.429330 | 1.1:-46316076 | MS.gene47332:CDS |
| TGAATTACCTCGAAAATACT+TGG | 0.438736 | 1.1:+46312938 | None:intergenic |
| AGGCTGAACTACGGCGGTTG+AGG | 0.444682 | 1.1:+46316471 | None:intergenic |
| GTATGATCCGAATTTGAGAT+TGG | 0.448557 | 1.1:-46313636 | MS.gene47332:CDS |
| TCCAAGTTGGCGAAGACAAT+CGG | 0.455066 | 1.1:+46316340 | None:intergenic |
| AAAGCAGACGCTTCGGATAG+AGG | 0.464660 | 1.1:+46314971 | None:intergenic |
| CAAACATCAAGGGCTTCAAT+AGG | 0.469326 | 1.1:+46315986 | None:intergenic |
| TATACCATTTCGAGCAGCCT+TGG | 0.469375 | 1.1:+46313598 | None:intergenic |
| CCAGCACCAGTTGTGTCAAC+AGG | 0.471899 | 1.1:+46313004 | None:intergenic |
| TATGCCAAGGCTGCTCGAAA+TGG | 0.475062 | 1.1:-46313602 | MS.gene47332:CDS |
| TTTCTTGAAAGCAGACGCTT+CGG | 0.476300 | 1.1:+46314964 | None:intergenic |
| TCTACAACCCTCCAACCCTT+TGG | 0.482944 | 1.1:+46313316 | None:intergenic |
| GGATCTAGCCGATGTCATAA+AGG | 0.488434 | 1.1:-46313564 | MS.gene47332:intron |
| GTGGACGGAATTATCAATAT+CGG | 0.488607 | 1.1:-46316085 | MS.gene47332:CDS |
| AAGAAGTGATATCCCAATCA+TGG | 0.492354 | 1.1:-46315551 | MS.gene47332:CDS |
| GAAACCTACCTGCAATATGA+AGG | 0.495646 | 1.1:+46316178 | None:intergenic |
| GTTGAACCTGTTGACACAAC+TGG | 0.496302 | 1.1:-46313010 | MS.gene47332:CDS |
| CCTGTTGACACAACTGGTGC+TGG | 0.498429 | 1.1:-46313004 | MS.gene47332:CDS |
| CAGTTGGCATCTCTAAGTTG+GGG | 0.501143 | 1.1:-46314916 | MS.gene47332:CDS |
| AAGGCGCCGCACAAACATCA+AGG | 0.501831 | 1.1:+46315975 | None:intergenic |
| AGATGAATTTGGGTATATGT+TGG | 0.503210 | 1.1:-46314035 | MS.gene47332:CDS |
| AGACGTGATACATGGAAGAT+TGG | 0.509563 | 1.1:-46315812 | MS.gene47332:CDS |
| GCAATCACGGTGACAAAGAG+AGG | 0.511886 | 1.1:-46312784 | MS.gene47332:CDS |
| AAAATTTACCTTTATGACAT+CGG | 0.512596 | 1.1:+46313556 | None:intergenic |
| CTGGTGATGCATTTGTCAGT+GGG | 0.517692 | 1.1:-46312985 | MS.gene47332:CDS |
| GCGTCTGCTTTCAAGAAAGC+TGG | 0.519176 | 1.1:-46314959 | MS.gene47332:CDS |
| AGCTTCTAATCGTTACCAAA+GGG | 0.520946 | 1.1:-46313331 | MS.gene47332:CDS |
| GCCGATTGTCTTCGCCAACT+TGG | 0.527403 | 1.1:-46316341 | MS.gene47332:CDS |
| CTAGAAATATTACAGTATTG+GGG | 0.528363 | 1.1:-46315780 | MS.gene47332:CDS |
| AATCGTTACCAAAGGGTTGG+AGG | 0.532823 | 1.1:-46313324 | MS.gene47332:CDS |
| TCTAATCGTTACCAAAGGGT+TGG | 0.532947 | 1.1:-46313327 | MS.gene47332:CDS |
| AAGCTTCTAATCGTTACCAA+AGG | 0.536353 | 1.1:-46313332 | MS.gene47332:CDS |
| TAATGTATGTGCCGCAATCA+CGG | 0.536513 | 1.1:-46312797 | MS.gene47332:CDS |
| TGGCTCATCAATCAAACTCA+TGG | 0.538259 | 1.1:+46313718 | None:intergenic |
| AAATGGTATAATGAGCATAT+GGG | 0.538336 | 1.1:-46313585 | MS.gene47332:CDS |
| ACAACATCATTGATACTGTC+AGG | 0.539983 | 1.1:-46315732 | MS.gene47332:intron |
| TTCATCTGCATTTATAAGCA+AGG | 0.542858 | 1.1:-46314891 | MS.gene47332:intron |
| AGTATCAATGATGTTGTGAC+TGG | 0.544617 | 1.1:+46315738 | None:intergenic |
| TGTTGATACATCTGGCATGC+GGG | 0.544908 | 1.1:-46313990 | MS.gene47332:CDS |
| TTAAAGGCACCTTCTTGATG+AGG | 0.548253 | 1.1:+46313843 | None:intergenic |
| CATTTAACGAATCTCCAAGT+TGG | 0.549382 | 1.1:+46316327 | None:intergenic |
| CATCAGTCATTAACAACTGC+AGG | 0.553154 | 1.1:+46316041 | None:intergenic |
| AGTTGGCATCTCTAAGTTGG+GGG | 0.556296 | 1.1:-46314915 | MS.gene47332:CDS |
| ATCGTTACCAAAGGGTTGGA+GGG | 0.561417 | 1.1:-46313323 | MS.gene47332:CDS |
| TCTAACGTAGACGTGATACA+TGG | 0.584899 | 1.1:-46315820 | MS.gene47332:CDS |
| GATAGATTTCGTGCCAAAAG+TGG | 0.585745 | 1.1:-46315011 | MS.gene47332:CDS |
| TAGAAATATTACAGTATTGG+GGG | 0.586705 | 1.1:-46315779 | MS.gene47332:CDS |
| TCGGTTGTACAGGGTCTGAA+AGG | 0.589621 | 1.1:-46316066 | MS.gene47332:CDS |
| GGCACTATGGCCATATGCCA+AGG | 0.589881 | 1.1:-46313615 | MS.gene47332:CDS |
| CTGCAACGAAACAAGTGGAC+TGG | 0.590072 | 1.1:-46315056 | MS.gene47332:CDS |
| GCAAGATGAACCGACTTGCA+TGG | 0.594358 | 1.1:+46313698 | None:intergenic |
| GCTGGTGATGCATTTGTCAG+TGG | 0.595598 | 1.1:-46312986 | MS.gene47332:CDS |
| TCTCTTTGTCACCGTGATTG+CGG | 0.597480 | 1.1:+46312786 | None:intergenic |
| GATGTTTGTGCGGCGCCTTG+TGG | 0.597482 | 1.1:-46315971 | MS.gene47332:CDS |
| TGATCATAACCTCATCAAGA+AGG | 0.598780 | 1.1:-46313852 | MS.gene47332:intron |
| CAATCACGGTGACAAAGAGA+GGG | 0.601122 | 1.1:-46312783 | MS.gene47332:CDS |
| AGAGTCTTTAGCAATTCTCA+AGG | 0.603061 | 1.1:+46313673 | None:intergenic |
| GAATTACCTCGAAAATACTT+GGG | 0.606713 | 1.1:+46312939 | None:intergenic |
| GAAGGCTGCAACGAAACAAG+TGG | 0.617852 | 1.1:-46315061 | MS.gene47332:CDS |
| GTTGGCATCTCTAAGTTGGG+GGG | 0.621474 | 1.1:-46314914 | MS.gene47332:CDS |
| AAACCTACCTGCAATATGAA+GGG | 0.622315 | 1.1:+46316179 | None:intergenic |
| CAAACGCATTGGCAGGTGGA+CGG | 0.626546 | 1.1:-46316100 | MS.gene47332:intron |
| AGGCGCCGCACAAACATCAA+GGG | 0.628109 | 1.1:+46315976 | None:intergenic |
| ACTGCCACAAGGATTGAGAT+CGG | 0.631896 | 1.1:+46316253 | None:intergenic |
| ATGTTGATACATCTGGCATG+CGG | 0.632944 | 1.1:-46313991 | MS.gene47332:CDS |
| AAGCTCCAAACTACTCTCGA+TGG | 0.633411 | 1.1:-46316203 | MS.gene47332:CDS |
| TGAAGCCCTTGATGTTTGTG+CGG | 0.633895 | 1.1:-46315981 | MS.gene47332:CDS |
| GCTCCTGCAAACGTGGCAGT+TGG | 0.636197 | 1.1:-46314932 | MS.gene47332:CDS |
| TGGTGATGCTCCTGCAAACG+TGG | 0.639166 | 1.1:-46314939 | MS.gene47332:CDS |
| GGAAGTATAGCACTGCCACA+AGG | 0.642414 | 1.1:+46316242 | None:intergenic |
| CTGCAGTTGTTAATGACTGA+TGG | 0.647979 | 1.1:-46316040 | MS.gene47332:CDS |
| GGGTTGTAGATATTACACTA+AGG | 0.649949 | 1.1:-46313303 | MS.gene47332:intron |
| TTGAGGCTGATCTACGAAGA+CGG | 0.650837 | 1.1:+46316488 | None:intergenic |
| GATTGATGAGCCATGCAAGT+CGG | 0.651378 | 1.1:-46313708 | MS.gene47332:CDS |
| TCCAGAAGCATACCAGCACT+AGG | 0.658678 | 1.1:+46313887 | None:intergenic |
| GTTTGGTTTGAAGAGAGACA+AGG | 0.658780 | 1.1:-46316366 | MS.gene47332:intron |
| TTATCAATATCGGTTGTACA+GGG | 0.659758 | 1.1:-46316075 | MS.gene47332:CDS |
| AGAAATATTACAGTATTGGG+GGG | 0.664926 | 1.1:-46315778 | MS.gene47332:CDS |
| TTCGTGCCAAAAGTGGTGTG+TGG | 0.676855 | 1.1:-46315004 | MS.gene47332:CDS |
| GTATCAATGATGTTGTGACT+GGG | 0.712542 | 1.1:+46315739 | None:intergenic |
| GAAGAAACCTTTAATCCACA+AGG | 0.724250 | 1.1:+46315956 | None:intergenic |
| AATCACGGTGACAAAGAGAG+GGG | 0.734564 | 1.1:-46312782 | MS.gene47332:CDS |
| AGGCTGATCTACGAAGACGG+CGG | 0.790103 | 1.1:+46316491 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAATAATTAACAG+TGG | + | chr1.1:46313878-46313897 | None:intergenic | 10.0% |
| !! | TTAATTTAACAATAAGAAAA+GGG | + | chr1.1:46315043-46315062 | None:intergenic | 10.0% |
| !!! | ACTTATTTGATTTAATTTTT+TGG | + | chr1.1:46313848-46313867 | None:intergenic | 10.0% |
| !!! | TTTAATTTAACAATAAGAAA+AGG | + | chr1.1:46315044-46315063 | None:intergenic | 10.0% |
| !! | AAAAGAAAATAATGAAATGA+GGG | + | chr1.1:46316040-46316059 | None:intergenic | 15.0% |
| !! | TGTAAAGTTACAAAATAATT+TGG | - | chr1.1:46313817-46313836 | MS.gene47332:intron | 15.0% |
| !! | TTAATTAGCATAACTTAATA+AGG | - | chr1.1:46314053-46314072 | MS.gene47332:intron | 15.0% |
| !! | TTAGTAATCATATTAACTTA+AGG | + | chr1.1:46316189-46316208 | None:intergenic | 15.0% |
| !!! | TATAATTTAATACTGATTGT+AGG | - | chr1.1:46315499-46315518 | MS.gene47332:intron | 15.0% |
| !! | AAAATTTACCTTTATGACAT+CGG | + | chr1.1:46315708-46315727 | None:intergenic | 20.0% |
| !! | AAAGTACAATAATAGAATCT+AGG | - | chr1.1:46314674-46314693 | MS.gene47332:intron | 20.0% |
| !! | AAGTACAATAATAGAATCTA+GGG | - | chr1.1:46314675-46314694 | MS.gene47332:intron | 20.0% |
| !! | AATAGAAGAATCATTTCATA+CGG | + | chr1.1:46314028-46314047 | None:intergenic | 20.0% |
| !! | AATCTAACTCATTCAATATT+AGG | + | chr1.1:46313762-46313781 | None:intergenic | 20.0% |
| !! | ATATATGTATTCAGATGAAA+AGG | + | chr1.1:46313346-46313365 | None:intergenic | 20.0% |
| !! | GAAAAGAAAATAATGAAATG+AGG | + | chr1.1:46316041-46316060 | None:intergenic | 20.0% |
| !! | TAAGAAATTTGTAATGTGTT+GGG | - | chr1.1:46314476-46314495 | MS.gene47332:intron | 20.0% |
| !! | TATTTATTCACATGGTTATT+CGG | - | chr1.1:46314411-46314430 | MS.gene47332:intron | 20.0% |
| !! | TGTCTATTTATTTATTCACA+TGG | - | chr1.1:46314403-46314422 | MS.gene47332:intron | 20.0% |
| !! | TTAAGAAATTTGTAATGTGT+TGG | - | chr1.1:46314475-46314494 | MS.gene47332:intron | 20.0% |
| !!! | TTGGTTCAATTTTTTTTTAC+TGG | + | chr1.1:46314140-46314159 | None:intergenic | 20.0% |
| ! | AAATGGTATAATGAGCATAT+GGG | - | chr1.1:46315676-46315695 | MS.gene47332:intron | 25.0% |
| ! | AACAATAAGAAAAGGGAAAA+GGG | + | chr1.1:46315036-46315055 | None:intergenic | 25.0% |
| ! | AATACAACTTCATCATCATT+AGG | + | chr1.1:46315884-46315903 | None:intergenic | 25.0% |
| ! | AATATACAGACTTAAACCAT+AGG | + | chr1.1:46315479-46315498 | None:intergenic | 25.0% |
| ! | AGAAAAAAATTGTGAGTGTT+TGG | - | chr1.1:46316379-46316398 | MS.gene47332:intron | 25.0% |
| ! | AGATTTGAACAAATCAAACA+TGG | + | chr1.1:46314449-46314468 | None:intergenic | 25.0% |
| ! | AGCTTAAGTAATCATAAATC+AGG | + | chr1.1:46314765-46314784 | None:intergenic | 25.0% |
| ! | ATACTTCTTGTAGTAGTATT+CGG | - | chr1.1:46315126-46315145 | MS.gene47332:intron | 25.0% |
| ! | ATAGAAGAATCATTTCATAC+GGG | + | chr1.1:46314027-46314046 | None:intergenic | 25.0% |
| ! | ATTGATTACACTTTACTGAA+TGG | - | chr1.1:46314508-46314527 | MS.gene47332:intron | 25.0% |
| ! | CCTAGAAATATTACAGTATT+GGG | - | chr1.1:46313480-46313499 | MS.gene47332:intron | 25.0% |
| ! | CTAGAAATATTACAGTATTG+GGG | - | chr1.1:46313481-46313500 | MS.gene47332:intron | 25.0% |
| ! | TAAACAGAGATGGAAATTAA+AGG | + | chr1.1:46315437-46315456 | None:intergenic | 25.0% |
| ! | TAACAATAAGAAAAGGGAAA+AGG | + | chr1.1:46315037-46315056 | None:intergenic | 25.0% |
| ! | TAGGCTAAAATATTCCATTA+TGG | - | chr1.1:46315518-46315537 | MS.gene47332:intron | 25.0% |
| ! | TCCTAGAAATATTACAGTAT+TGG | - | chr1.1:46313479-46313498 | MS.gene47332:intron | 25.0% |
| ! | TCTGATAATCTCATAATAGA+AGG | - | chr1.1:46314182-46314201 | MS.gene47332:intron | 25.0% |
| !! | AATTTTTGTGCAGGATTTTA+AGG | - | chr1.1:46316208-46316227 | MS.gene47332:CDS | 25.0% |
| !! | ATTTTTGTGCAGGATTTTAA+GGG | - | chr1.1:46316209-46316228 | MS.gene47332:CDS | 25.0% |
| !! | TAGAAATATTACAGTATTGG+GGG | - | chr1.1:46313482-46313501 | MS.gene47332:intron | 25.0% |
| !! | TAGCGAAATATAATGCATTT+TGG | + | chr1.1:46316446-46316465 | None:intergenic | 25.0% |
| !! | TGATTACTAAATTTTTGTGC+AGG | - | chr1.1:46316199-46316218 | MS.gene47332:CDS | 25.0% |
| !! | TTTTGAATTCAACTATCACA+TGG | + | chr1.1:46313954-46313973 | None:intergenic | 25.0% |
| !!! | AGCTTTTGAAAATTAAGAGT+AGG | + | chr1.1:46313043-46313062 | None:intergenic | 25.0% |
| !!! | CAGATTTTAATTGTCTGAAT+AGG | - | chr1.1:46316005-46316024 | MS.gene47332:CDS | 25.0% |
| !!! | GTTCAATTTTTTTTTACTGG+TGG | + | chr1.1:46314137-46314156 | None:intergenic | 25.0% |
| !!! | GTTTTTTGCTATTTTTCTCT+TGG | + | chr1.1:46312745-46312764 | None:intergenic | 25.0% |
| AAGTGTAACAAAAGCCAATT+TGG | + | chr1.1:46315315-46315334 | None:intergenic | 30.0% | |
| ACTTAAACCATAGGTCTTTA+TGG | + | chr1.1:46315470-46315489 | None:intergenic | 30.0% | |
| ACTTAAGCTGTAAGTAATGA+GGG | - | chr1.1:46314776-46314795 | MS.gene47332:intron | 30.0% | |
| AGATGAATTTGGGTATATGT+TGG | - | chr1.1:46315226-46315245 | MS.gene47332:intron | 30.0% | |
| ATTTCTGAGTATCATCATTG+TGG | + | chr1.1:46313603-46313622 | None:intergenic | 30.0% | |
| CAAAGTAATGTTGATACATC+TGG | - | chr1.1:46315263-46315282 | MS.gene47332:intron | 30.0% | |
| CATATTATATCAGTCAGTCA+TGG | - | chr1.1:46313557-46313576 | MS.gene47332:intron | 30.0% | |
| CCATCTCTGTTTATAAAATG+TGG | - | chr1.1:46315444-46315463 | MS.gene47332:intron | 30.0% | |
| CCCAATACTGTAATATTTCT+AGG | + | chr1.1:46313483-46313502 | None:intergenic | 30.0% | |
| GAAAAAAGAATGAAGTGCAA+AGG | + | chr1.1:46315775-46315794 | None:intergenic | 30.0% | |
| GAAATGGTATAATGAGCATA+TGG | - | chr1.1:46315675-46315694 | MS.gene47332:intron | 30.0% | |
| GAATTACCTCGAAAATACTT+GGG | + | chr1.1:46316325-46316344 | None:intergenic | 30.0% | |
| GACAAGTACTATATGAAGTT+TGG | - | chr1.1:46313974-46313993 | MS.gene47332:CDS | 30.0% | |
| TACTTAAGCTGTAAGTAATG+AGG | - | chr1.1:46314775-46314794 | MS.gene47332:intron | 30.0% | |
| TGAATTACCTCGAAAATACT+TGG | + | chr1.1:46316326-46316345 | None:intergenic | 30.0% | |
| TTAGGAATGTGAATCTATGT+TGG | - | chr1.1:46315153-46315172 | MS.gene47332:intron | 30.0% | |
| TTCATCTGCATTTATAAGCA+AGG | - | chr1.1:46314370-46314389 | MS.gene47332:intron | 30.0% | |
| TTCATTCTATTCTTCCTTTG+CGG | - | chr1.1:46313119-46313138 | MS.gene47332:intron | 30.0% | |
| TTGAAGTGGTTTCTATTCAA+TGG | + | chr1.1:46314973-46314992 | None:intergenic | 30.0% | |
| TTTCTCTTTATTCTGATGAG+TGG | - | chr1.1:46316057-46316076 | MS.gene47332:CDS | 30.0% | |
| ! | AAATCTGAGTTGAATGACTT+TGG | + | chr1.1:46315992-46316011 | None:intergenic | 30.0% |
| ! | AGAAATATTACAGTATTGGG+GGG | - | chr1.1:46313483-46313502 | MS.gene47332:intron | 30.0% |
| ! | ATTATCAATATCGGTTGTAC+AGG | - | chr1.1:46313185-46313204 | MS.gene47332:intron | 30.0% |
| ! | CCACATTTTATAAACAGAGA+TGG | + | chr1.1:46315447-46315466 | None:intergenic | 30.0% |
| ! | GTACTTTTGCAAGTACATAT+GGG | + | chr1.1:46314661-46314680 | None:intergenic | 30.0% |
| ! | GTAGTAGTATTCGGAATTTT+AGG | - | chr1.1:46315135-46315154 | MS.gene47332:intron | 30.0% |
| ! | TGTACTTTTGCAAGTACATA+TGG | + | chr1.1:46314662-46314681 | None:intergenic | 30.0% |
| ! | TTATCAATATCGGTTGTACA+GGG | - | chr1.1:46313186-46313205 | MS.gene47332:intron | 30.0% |
| !! | ACTTTTTCTTGTCCATGATT+GGG | + | chr1.1:46313725-46313744 | None:intergenic | 30.0% |
| !! | GATTTTAAGGGCAAAATTAG+AGG | - | chr1.1:46316221-46316240 | MS.gene47332:CDS | 30.0% |
| !! | TGTAAGTAATGAGGGTATTT+AGG | - | chr1.1:46314784-46314803 | MS.gene47332:intron | 30.0% |
| !!! | GATGAGATTACTTTTTTGAC+TGG | - | chr1.1:46315848-46315867 | MS.gene47332:intron | 30.0% |
| !!! | TACTTTTTCTTGTCCATGAT+TGG | + | chr1.1:46313726-46313745 | None:intergenic | 30.0% |
| AAACCTACCTGCAATATGAA+GGG | + | chr1.1:46313085-46313104 | None:intergenic | 35.0% | |
| AACCTAAAACAGAGATGATG+AGG | + | chr1.1:46315201-46315220 | None:intergenic | 35.0% | |
| AAGAAGTGATATCCCAATCA+TGG | - | chr1.1:46313710-46313729 | MS.gene47332:CDS | 35.0% | |
| AAGCTTCTAATCGTTACCAA+AGG | - | chr1.1:46315929-46315948 | MS.gene47332:intron | 35.0% | |
| AAGTGGTTTCTATTCAATGG+TGG | + | chr1.1:46314970-46314989 | None:intergenic | 35.0% | |
| AATGCAACGTTGTCATATCT+GGG | - | chr1.1:46314581-46314600 | MS.gene47332:intron | 35.0% | |
| ACAACATCATTGATACTGTC+AGG | - | chr1.1:46313529-46313548 | MS.gene47332:intron | 35.0% | |
| ACCTGCAAAACATGAATTGT+TGG | + | chr1.1:46314159-46314178 | None:intergenic | 35.0% | |
| ACGATTAGAAGCTTGAGATT+AGG | + | chr1.1:46315923-46315942 | None:intergenic | 35.0% | |
| AGAGTCTTTAGCAATTCTCA+AGG | + | chr1.1:46315591-46315610 | None:intergenic | 35.0% | |
| AGCTTCTAATCGTTACCAAA+GGG | - | chr1.1:46315930-46315949 | MS.gene47332:intron | 35.0% | |
| AGTATCAATGATGTTGTGAC+TGG | + | chr1.1:46313526-46313545 | None:intergenic | 35.0% | |
| ATAGAAACCACTTCAAAACC+TGG | - | chr1.1:46314977-46314996 | MS.gene47332:CDS | 35.0% | |
| ATATCAGTCAGTCATGGTTA+CGG | - | chr1.1:46313563-46313582 | MS.gene47332:intron | 35.0% | |
| ATTCCAAAGCTCACATTTCA+AGG | + | chr1.1:46314564-46314583 | None:intergenic | 35.0% | |
| CAACTTGGAGATTCGTTAAA+TGG | - | chr1.1:46312935-46312954 | MS.gene47332:intron | 35.0% | |
| CATAGTGCCAATCTCAAATT+CGG | + | chr1.1:46315635-46315654 | None:intergenic | 35.0% | |
| CATTTAACGAATCTCCAAGT+TGG | + | chr1.1:46312937-46312956 | None:intergenic | 35.0% | |
| CGATTAGAAGCTTGAGATTA+GGG | + | chr1.1:46315922-46315941 | None:intergenic | 35.0% | |
| CTAAAAAGTTCCCTCAGAAT+CGG | - | chr1.1:46312811-46312830 | MS.gene47332:CDS | 35.0% | |
| CTTTGATGTTTCCAAAAAGG+CGG | - | chr1.1:46312958-46312977 | MS.gene47332:CDS | 35.0% | |
| GAAGAAACCTTTAATCCACA+AGG | + | chr1.1:46313308-46313327 | None:intergenic | 35.0% | |
| GGGTTGTAGATATTACACTA+AGG | - | chr1.1:46315958-46315977 | MS.gene47332:intron | 35.0% | |
| GTATCAATGATGTTGTGACT+GGG | + | chr1.1:46313525-46313544 | None:intergenic | 35.0% | |
| GTGGACGGAATTATCAATAT+CGG | - | chr1.1:46313176-46313195 | MS.gene47332:intron | 35.0% | |
| TCAAACTCATGGAACCATAA+TGG | + | chr1.1:46315535-46315554 | None:intergenic | 35.0% | |
| TCATAAATCAGGCTCATAGA+AGG | + | chr1.1:46314754-46314773 | None:intergenic | 35.0% | |
| TCTGATCACCTATTGAAACT+CGG | - | chr1.1:46312872-46312891 | MS.gene47332:intron | 35.0% | |
| TGATCATAACCTCATCAAGA+AGG | - | chr1.1:46315409-46315428 | MS.gene47332:intron | 35.0% | |
| TGGAAATGGGAAGTTATAGT+TGG | + | chr1.1:46315003-46315022 | None:intergenic | 35.0% | |
| TTCTAATGCCAGAACCAAAT+TGG | - | chr1.1:46315298-46315317 | MS.gene47332:intron | 35.0% | |
| ! | AACAAAAGCCAATTTGGTTC+TGG | + | chr1.1:46315309-46315328 | None:intergenic | 35.0% |
| ! | ACATCTTTTGTAGGTAATGC+AGG | + | chr1.1:46316510-46316529 | None:intergenic | 35.0% |
| ! | ACCAACAATTCATGTTTTGC+AGG | - | chr1.1:46314155-46314174 | MS.gene47332:intron | 35.0% |
| ! | AGAGATGTATTGGTACTTGT+AGG | - | chr1.1:46313410-46313429 | MS.gene47332:CDS | 35.0% |
| ! | CAAGTTGAAAAACTTGAGCA+AGG | - | chr1.1:46316145-46316164 | MS.gene47332:intron | 35.0% |
| ! | GATGGTACTCAAAGAGTATA+TGG | - | chr1.1:46313239-46313258 | MS.gene47332:intron | 35.0% |
| ! | GGTTAACTTGAGAGATGTAT+TGG | - | chr1.1:46313400-46313419 | MS.gene47332:CDS | 35.0% |
| ! | GTATGATCCGAATTTGAGAT+TGG | - | chr1.1:46315625-46315644 | MS.gene47332:intron | 35.0% |
| ! | TTTTTGTGCTAAATCGTCTC+TGG | - | chr1.1:46313652-46313671 | MS.gene47332:CDS | 35.0% |
| !! | GAACTTTTTAGGCTGAACTA+CGG | + | chr1.1:46312802-46312821 | None:intergenic | 35.0% |
| !! | GTTGACGAAGTTATTTTGTG+TGG | - | chr1.1:46316403-46316422 | MS.gene47332:intron | 35.0% |
| !! | TCATCATCTCTGTTTTAGGT+TGG | - | chr1.1:46315200-46315219 | MS.gene47332:intron | 35.0% |
| !! | TGGCTTTGATGTTTCCAAAA+AGG | - | chr1.1:46312955-46312974 | MS.gene47332:CDS | 35.0% |
| !!! | ATTACTTTTTTGACTGGTGG+TGG | - | chr1.1:46315854-46315873 | MS.gene47332:intron | 35.0% |
| !!! | GAGATTACTTTTTTGACTGG+TGG | - | chr1.1:46315851-46315870 | MS.gene47332:intron | 35.0% |
| AAAGGGAAAAGGGTAGAATG+AGG | + | chr1.1:46315026-46315045 | None:intergenic | 40.0% | |
| AACCAAACCCGAGTTTCAAT+AGG | + | chr1.1:46312883-46312902 | None:intergenic | 40.0% | |
| AATGTGGCCATAAAGACCTA+TGG | - | chr1.1:46315460-46315479 | MS.gene47332:intron | 40.0% | |
| ACTCCTTGAAATGTGAGCTT+TGG | - | chr1.1:46314558-46314577 | MS.gene47332:intron | 40.0% | |
| AGACGTGATACATGGAAGAT+TGG | - | chr1.1:46313449-46313468 | MS.gene47332:intron | 40.0% | |
| AGGTTGGAGCAGATGAATTT+GGG | - | chr1.1:46315216-46315235 | MS.gene47332:intron | 40.0% | |
| ATGTTGATACATCTGGCATG+CGG | - | chr1.1:46315270-46315289 | MS.gene47332:intron | 40.0% | |
| CAAACATCAAGGGCTTCAAT+AGG | + | chr1.1:46313278-46313297 | None:intergenic | 40.0% | |
| CAATAGGTGATCAGAGACAT+CGG | + | chr1.1:46312867-46312886 | None:intergenic | 40.0% | |
| CAGTCTTTGCATCAAATTGC+AGG | + | chr1.1:46316536-46316555 | None:intergenic | 40.0% | |
| CATCAGTCATTAACAACTGC+AGG | + | chr1.1:46313223-46313242 | None:intergenic | 40.0% | |
| CATTTCACACTCAAACGCAT+TGG | - | chr1.1:46313150-46313169 | MS.gene47332:intron | 40.0% | |
| CTCTCAAGTTAACCCTAACT+CGG | + | chr1.1:46313394-46313413 | None:intergenic | 40.0% | |
| CTGATCACCTATTGAAACTC+GGG | - | chr1.1:46312873-46312892 | MS.gene47332:intron | 40.0% | |
| CTGCAGTTGTTAATGACTGA+TGG | - | chr1.1:46313221-46313240 | MS.gene47332:intron | 40.0% | |
| GAAACCTACCTGCAATATGA+AGG | + | chr1.1:46313086-46313105 | None:intergenic | 40.0% | |
| GAATGCAACGTTGTCATATC+TGG | - | chr1.1:46314580-46314599 | MS.gene47332:intron | 40.0% | |
| GATAGATTTCGTGCCAAAAG+TGG | - | chr1.1:46314250-46314269 | MS.gene47332:intron | 40.0% | |
| GTTTATGTGATCCCTTGAGA+AGG | - | chr1.1:46314706-46314725 | MS.gene47332:intron | 40.0% | |
| TAATGTATGTGCCGCAATCA+CGG | - | chr1.1:46316464-46316483 | MS.gene47332:intron | 40.0% | |
| TCTAACGTAGACGTGATACA+TGG | - | chr1.1:46313441-46313460 | MS.gene47332:intron | 40.0% | |
| TCTAATCGTTACCAAAGGGT+TGG | - | chr1.1:46315934-46315953 | MS.gene47332:intron | 40.0% | |
| TGAATGGCATGTGTGTTTCA+AGG | - | chr1.1:46314524-46314543 | MS.gene47332:intron | 40.0% | |
| TGGCTCATCAATCAAACTCA+TGG | + | chr1.1:46315546-46315565 | None:intergenic | 40.0% | |
| TTTCTTGAAAGCAGACGCTT+CGG | + | chr1.1:46314300-46314319 | None:intergenic | 40.0% | |
| ! | AATATTACAGTATTGGGGGG+TGG | - | chr1.1:46313486-46313505 | MS.gene47332:intron | 40.0% |
| ! | CGAATTTGAGATTGGCACTA+TGG | - | chr1.1:46315633-46315652 | MS.gene47332:intron | 40.0% |
| ! | CTCCTCATCATCTCTGTTTT+AGG | - | chr1.1:46315196-46315215 | MS.gene47332:intron | 40.0% |
| ! | GAAACAGATTTCCGCCTTTT+TGG | + | chr1.1:46312972-46312991 | None:intergenic | 40.0% |
| ! | GAAATGTTCAAGTTCCGCAA+AGG | + | chr1.1:46313136-46313155 | None:intergenic | 40.0% |
| ! | GGTAAAGTTCGTGCATTTTC+AGG | - | chr1.1:46314602-46314621 | MS.gene47332:intron | 40.0% |
| ! | TAGGTTGGAGCAGATGAATT+TGG | - | chr1.1:46315215-46315234 | MS.gene47332:intron | 40.0% |
| ! | TGCAGGACAACATCTTTTGT+AGG | + | chr1.1:46316519-46316538 | None:intergenic | 40.0% |
| ! | TTCTGACCCAAGTATTTTCG+AGG | - | chr1.1:46316316-46316335 | MS.gene47332:CDS | 40.0% |
| ! | TTGCTATTCTCTCCGAGTTA+GGG | - | chr1.1:46313379-46313398 | MS.gene47332:CDS | 40.0% |
| ! | TTTTCCGATCTCAATCCTTG+TGG | - | chr1.1:46313004-46313023 | MS.gene47332:CDS | 40.0% |
| ! | TTTTTCCGAAATCCTAGTGC+TGG | - | chr1.1:46315362-46315381 | MS.gene47332:intron | 40.0% |
| !! | ACATGGAAAGCATTACCAAC+AGG | + | chr1.1:46313937-46313956 | None:intergenic | 40.0% |
| !! | ACGAAGTTATTTTGTGTGGC+AGG | - | chr1.1:46316407-46316426 | MS.gene47332:intron | 40.0% |
| !! | CGATTCTGAGGGAACTTTTT+AGG | + | chr1.1:46312813-46312832 | None:intergenic | 40.0% |
| !! | GTTTGGTTTGAAGAGAGACA+AGG | - | chr1.1:46312895-46312914 | MS.gene47332:intron | 40.0% |
| !! | TGATGAGTGGACTGAAATGT+TGG | - | chr1.1:46316070-46316089 | MS.gene47332:CDS | 40.0% |
| !! | TTAAAGGCACCTTCTTGATG+AGG | + | chr1.1:46315421-46315440 | None:intergenic | 40.0% |
| !! | TTTGCTATTCTCTCCGAGTT+AGG | - | chr1.1:46313378-46313397 | MS.gene47332:CDS | 40.0% |
| !!! | AGTGGACTGGTTGTTTGTTT+TGG | - | chr1.1:46314218-46314237 | MS.gene47332:intron | 40.0% |
| AAGCTCCAAACTACTCTCGA+TGG | - | chr1.1:46313058-46313077 | MS.gene47332:intron | 45.0% | |
| AATCACGGTGACAAAGAGAG+GGG | - | chr1.1:46316479-46316498 | MS.gene47332:intron | 45.0% | |
| AATCGTTACCAAAGGGTTGG+AGG | - | chr1.1:46315937-46315956 | MS.gene47332:intron | 45.0% | |
| ACTGCCACAAGGATTGAGAT+CGG | + | chr1.1:46313011-46313030 | None:intergenic | 45.0% | |
| AGGGTAGAATGAGGTGGAAA+TGG | + | chr1.1:46315017-46315036 | None:intergenic | 45.0% | |
| ATCGTTACCAAAGGGTTGGA+GGG | - | chr1.1:46315938-46315957 | MS.gene47332:intron | 45.0% | |
| ATGGGAAGTTATAGTTGGCC+AGG | + | chr1.1:46314998-46315017 | None:intergenic | 45.0% | |
| CAATCACGGTGACAAAGAGA+GGG | - | chr1.1:46316478-46316497 | MS.gene47332:intron | 45.0% | |
| CACCTATTGAAACTCGGGTT+TGG | - | chr1.1:46312878-46312897 | MS.gene47332:intron | 45.0% | |
| CAGATGAAAAGGATGTCTCG+TGG | + | chr1.1:46313335-46313354 | None:intergenic | 45.0% | |
| CAGTTGGCATCTCTAAGTTG+GGG | - | chr1.1:46314345-46314364 | MS.gene47332:intron | 45.0% | |
| GATTGATGAGCCATGCAAGT+CGG | - | chr1.1:46315553-46315572 | MS.gene47332:CDS | 45.0% | |
| GCAGTTGGCATCTCTAAGTT+GGG | - | chr1.1:46314344-46314363 | MS.gene47332:intron | 45.0% | |
| GCATACCAGCACTAGGATTT+CGG | + | chr1.1:46315370-46315389 | None:intergenic | 45.0% | |
| GGATCTAGCCGATGTCATAA+AGG | - | chr1.1:46315697-46315716 | MS.gene47332:intron | 45.0% | |
| GGGTAGAATGAGGTGGAAAT+GGG | + | chr1.1:46315016-46315035 | None:intergenic | 45.0% | |
| GTTGAACCTGTTGACACAAC+TGG | - | chr1.1:46316251-46316270 | MS.gene47332:CDS | 45.0% | |
| TATACCATTTCGAGCAGCCT+TGG | + | chr1.1:46315666-46315685 | None:intergenic | 45.0% | |
| TCTCTTTGTCACCGTGATTG+CGG | + | chr1.1:46316478-46316497 | None:intergenic | 45.0% | |
| TGAAGCCCTTGATGTTTGTG+CGG | - | chr1.1:46313280-46313299 | MS.gene47332:intron | 45.0% | |
| TGTTGATACATCTGGCATGC+GGG | - | chr1.1:46315271-46315290 | MS.gene47332:intron | 45.0% | |
| TTGAGGCTGATCTACGAAGA+CGG | + | chr1.1:46312776-46312795 | None:intergenic | 45.0% | |
| ! | AGTTGGCATCTCTAAGTTGG+GGG | - | chr1.1:46314346-46314365 | MS.gene47332:intron | 45.0% |
| ! | CTGGTGATGCATTTGTCAGT+GGG | - | chr1.1:46316276-46316295 | MS.gene47332:CDS | 45.0% |
| ! | TCCAAGTTGGCGAAGACAAT+CGG | + | chr1.1:46312924-46312943 | None:intergenic | 45.0% |
| !! | CTTTTTAGGCTGAACTACGG+CGG | + | chr1.1:46312799-46312818 | None:intergenic | 45.0% |
| !! | TTCTAGAAGCCTCTAGAGCT+CGG | + | chr1.1:46314818-46314837 | None:intergenic | 45.0% |
| !!! | TAGTTGGCCAGGTTTTGAAG+TGG | + | chr1.1:46314987-46315006 | None:intergenic | 45.0% |
| AAAGCAGACGCTTCGGATAG+AGG | + | chr1.1:46314293-46314312 | None:intergenic | 50.0% | |
| AACCCTTGAGAGCCTTCTCA+AGG | + | chr1.1:46314721-46314740 | None:intergenic | 50.0% | |
| ACCCTTGAGAGCCTTCTCAA+GGG | + | chr1.1:46314720-46314739 | None:intergenic | 50.0% | |
| AGGGACCATCGAGAGTAGTT+TGG | + | chr1.1:46313066-46313085 | None:intergenic | 50.0% | |
| ATCCCTTGAGAAGGCTCTCA+AGG | - | chr1.1:46314715-46314734 | MS.gene47332:intron | 50.0% | |
| ATGACTTAGAAGCCCTCCCA+AGG | + | chr1.1:46314931-46314950 | None:intergenic | 50.0% | |
| CGATGGTCCCTTCATATTGC+AGG | - | chr1.1:46313075-46313094 | MS.gene47332:intron | 50.0% | |
| CTGCAACGAAACAAGTGGAC+TGG | - | chr1.1:46314205-46314224 | MS.gene47332:intron | 50.0% | |
| GAAGGCTGCAACGAAACAAG+TGG | - | chr1.1:46314200-46314219 | MS.gene47332:intron | 50.0% | |
| GCAATCACGGTGACAAAGAG+AGG | - | chr1.1:46316477-46316496 | MS.gene47332:intron | 50.0% | |
| GCGTCTGCTTTCAAGAAAGC+TGG | - | chr1.1:46314302-46314321 | MS.gene47332:intron | 50.0% | |
| GGCAGTTGGCATCTCTAAGT+TGG | - | chr1.1:46314343-46314362 | MS.gene47332:intron | 50.0% | |
| GGGAAAAGGGTAGAATGAGG+TGG | + | chr1.1:46315023-46315042 | None:intergenic | 50.0% | |
| GGTCCCTTCATATTGCAGGT+AGG | - | chr1.1:46313079-46313098 | MS.gene47332:intron | 50.0% | |
| TATGCCAAGGCTGCTCGAAA+TGG | - | chr1.1:46315659-46315678 | MS.gene47332:intron | 50.0% | |
| TCCCTTGAGAAGGCTCTCAA+GGG | - | chr1.1:46314716-46314735 | MS.gene47332:intron | 50.0% | |
| TCGACTGCTTCCGATTCTGA+GGG | + | chr1.1:46312824-46312843 | None:intergenic | 50.0% | |
| TCGGTTGTACAGGGTCTGAA+AGG | - | chr1.1:46313195-46313214 | MS.gene47332:intron | 50.0% | |
| TCGTCTCTGGCTATGCTTGA+AGG | - | chr1.1:46313665-46313684 | MS.gene47332:CDS | 50.0% | |
| TCTACAACCCTCCAACCCTT+TGG | + | chr1.1:46315948-46315967 | None:intergenic | 50.0% | |
| TGACTTAGAAGCCCTCCCAA+GGG | + | chr1.1:46314930-46314949 | None:intergenic | 50.0% | |
| TTCGACTGCTTCCGATTCTG+AGG | + | chr1.1:46312825-46312844 | None:intergenic | 50.0% | |
| TTCGTGCCAAAAGTGGTGTG+TGG | - | chr1.1:46314257-46314276 | MS.gene47332:intron | 50.0% | |
| TTTCGAGCAGCCTTGGCATA+TGG | + | chr1.1:46315659-46315678 | None:intergenic | 50.0% | |
| ! | AGGCTTCTAGAAGCTAGCTG+AGG | - | chr1.1:46314826-46314845 | MS.gene47332:intron | 50.0% |
| ! | CGAAGTCCACACACCACTTT+TGG | + | chr1.1:46314266-46314285 | None:intergenic | 50.0% |
| ! | CTTCTAGAAGCTAGCTGAGG+CGG | - | chr1.1:46314829-46314848 | MS.gene47332:intron | 50.0% |
| ! | CTTGAGCAAGGTTTGCTTCG+AGG | - | chr1.1:46316157-46316176 | MS.gene47332:intron | 50.0% |
| ! | GAGCTTGCTTGTTAGCCTGT+TGG | - | chr1.1:46313919-46313938 | MS.gene47332:CDS | 50.0% |
| ! | GCTGGTGATGCATTTGTCAG+TGG | - | chr1.1:46316275-46316294 | MS.gene47332:CDS | 50.0% |
| ! | GGAAGTATAGCACTGCCACA+AGG | + | chr1.1:46313022-46313041 | None:intergenic | 50.0% |
| ! | GTCATTATGCCGAGCTCTAG+AGG | - | chr1.1:46314806-46314825 | MS.gene47332:intron | 50.0% |
| ! | GTTGGCATCTCTAAGTTGGG+GGG | - | chr1.1:46314347-46314366 | MS.gene47332:intron | 50.0% |
| ! | TCACACTCAAACGCATTGGC+AGG | - | chr1.1:46313154-46313173 | MS.gene47332:intron | 50.0% |
| ! | TCCAGAAGCATACCAGCACT+AGG | + | chr1.1:46315377-46315396 | None:intergenic | 50.0% |
| ! | TGCCCTTCTAAAGGGCTCTA+GGG | + | chr1.1:46314880-46314899 | None:intergenic | 50.0% |
| !! | GCAAGATGAACCGACTTGCA+TGG | + | chr1.1:46315566-46315585 | None:intergenic | 50.0% |
| !! | TCCTAGTGCTGGTATGCTTC+TGG | - | chr1.1:46315373-46315392 | MS.gene47332:intron | 50.0% |
| AGGCCTCAGTGCCCTTCTAA+AGG | + | chr1.1:46314889-46314908 | None:intergenic | 55.0% | |
| AGGCTGATCTACGAAGACGG+CGG | + | chr1.1:46312773-46312792 | None:intergenic | 55.0% | |
| ATGCCAACTGCCACGTTTGC+AGG | + | chr1.1:46314335-46314354 | None:intergenic | 55.0% | |
| CCAGCACCAGTTGTGTCAAC+AGG | + | chr1.1:46316260-46316279 | None:intergenic | 55.0% | |
| CCTGTTGACACAACTGGTGC+TGG | - | chr1.1:46316257-46316276 | MS.gene47332:CDS | 55.0% | |
| GACTTAGAAGCCCTCCCAAG+GGG | + | chr1.1:46314929-46314948 | None:intergenic | 55.0% | |
| GCCGATTGTCTTCGCCAACT+TGG | - | chr1.1:46312920-46312939 | MS.gene47332:intron | 55.0% | |
| GGCACTATGGCCATATGCCA+AGG | - | chr1.1:46315646-46315665 | MS.gene47332:intron | 55.0% | |
| GGCCTCAGTGCCCTTCTAAA+GGG | + | chr1.1:46314888-46314907 | None:intergenic | 55.0% | |
| ! | AGGCGCCGCACAAACATCAA+GGG | + | chr1.1:46313288-46313307 | None:intergenic | 55.0% |
| ! | CAAACGCATTGGCAGGTGGA+CGG | - | chr1.1:46313161-46313180 | MS.gene47332:intron | 55.0% |
| ! | CACTCAAACGCATTGGCAGG+TGG | - | chr1.1:46313157-46313176 | MS.gene47332:intron | 55.0% |
| ! | GGCCCTAGAGCCCTTTAGAA+GGG | - | chr1.1:46314875-46314894 | MS.gene47332:intron | 55.0% |
| ! | GTGCCCTTCTAAAGGGCTCT+AGG | + | chr1.1:46314881-46314900 | None:intergenic | 55.0% |
| ! | TGCGGCGCCTTGTGGATTAA+AGG | - | chr1.1:46313298-46313317 | MS.gene47332:intron | 55.0% |
| ! | TGGTGATGCTCCTGCAAACG+TGG | - | chr1.1:46314322-46314341 | MS.gene47332:intron | 55.0% |
| !! | AAGGCGCCGCACAAACATCA+AGG | + | chr1.1:46313289-46313308 | None:intergenic | 55.0% |
| !! | AGCCCTTTAGAAGGGCACTG+AGG | - | chr1.1:46314883-46314902 | MS.gene47332:intron | 55.0% |
| AAGCCCTCCCAAGGGGTCTA+AGG | + | chr1.1:46314922-46314941 | None:intergenic | 60.0% | |
| AGGAGGGTCCTTAGACCCCT+TGG | - | chr1.1:46314911-46314930 | MS.gene47332:CDS | 60.0% | |
| AGGCTGAACTACGGCGGTTG+AGG | + | chr1.1:46312793-46312812 | None:intergenic | 60.0% | |
| GATGTTTGTGCGGCGCCTTG+TGG | - | chr1.1:46313290-46313309 | MS.gene47332:intron | 60.0% | |
| GCTCCTGCAAACGTGGCAGT+TGG | - | chr1.1:46314329-46314348 | MS.gene47332:intron | 60.0% | |
| GGAGGGTCCTTAGACCCCTT+GGG | - | chr1.1:46314912-46314931 | MS.gene47332:CDS | 60.0% | |
| GGGCCCTAGAGCCCTTTAGA+AGG | - | chr1.1:46314874-46314893 | MS.gene47332:intron | 60.0% | |
| GGGTCTAAGGACCCTCCTAG+AGG | + | chr1.1:46314909-46314928 | None:intergenic | 60.0% | |
| GGTCCTTAGACCCCTTGGGA+GGG | - | chr1.1:46314916-46314935 | MS.gene47332:CDS | 60.0% | |
| !! | AGAAGGGCACTGAGGCCTCT+AGG | - | chr1.1:46314891-46314910 | MS.gene47332:intron | 60.0% |
| !! | CTAAAGGGCTCTAGGGCCCA+AGG | + | chr1.1:46314873-46314892 | None:intergenic | 60.0% |
| CCCAAGGCACACCCTCCACA+GGG | + | chr1.1:46314857-46314876 | None:intergenic | 65.0% | |
| GGGTCCTTAGACCCCTTGGG+AGG | - | chr1.1:46314915-46314934 | MS.gene47332:CDS | 65.0% | |
| ! | CCCTGTGGAGGGTGTGCCTT+GGG | - | chr1.1:46314854-46314873 | MS.gene47332:intron | 65.0% |
| !! | AGGGCACTGAGGCCTCTAGG+AGG | - | chr1.1:46314894-46314913 | MS.gene47332:CDS | 65.0% |
| !! | GGGCACTGAGGCCTCTAGGA+GGG | - | chr1.1:46314895-46314914 | MS.gene47332:CDS | 65.0% |
| GCCCAAGGCACACCCTCCAC+AGG | + | chr1.1:46314858-46314877 | None:intergenic | 70.0% | |
| ! | GCCCTGTGGAGGGTGTGCCT+TGG | - | chr1.1:46314853-46314872 | MS.gene47332:intron | 70.0% |
| CTAGCTGAGGCGGCGCCCTG+TGG | - | chr1.1:46314839-46314858 | MS.gene47332:intron | 75.0% | |
| CTGAGGCGGCGCCCTGTGGA+GGG | - | chr1.1:46314843-46314862 | MS.gene47332:intron | 75.0% | |
| ! | GCTGAGGCGGCGCCCTGTGG+AGG | - | chr1.1:46314842-46314861 | MS.gene47332:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 46312720 | 46316563 | 46312720 | ID=MS.gene47332 |
| chr1.1 | mRNA | 46312720 | 46316563 | 46312720 | ID=MS.gene47332.t1;Parent=MS.gene47332 |
| chr1.1 | exon | 46316480 | 46316563 | 46316480 | ID=MS.gene47332.t1.exon1;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46316480 | 46316563 | 46316480 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46316187 | 46316375 | 46316187 | ID=MS.gene47332.t1.exon2;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46316187 | 46316375 | 46316187 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46315964 | 46316107 | 46315964 | ID=MS.gene47332.t1.exon3;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46315964 | 46316107 | 46315964 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46315733 | 46315851 | 46315733 | ID=MS.gene47332.t1.exon4;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46315733 | 46315851 | 46315733 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46315541 | 46315596 | 46315541 | ID=MS.gene47332.t1.exon5;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46315541 | 46315596 | 46315541 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46314892 | 46315106 | 46314892 | ID=MS.gene47332.t1.exon6;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46314892 | 46315106 | 46314892 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46313853 | 46314065 | 46313853 | ID=MS.gene47332.t1.exon7;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46313853 | 46314065 | 46313853 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46313565 | 46313762 | 46313565 | ID=MS.gene47332.t1.exon8;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46313565 | 46313762 | 46313565 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46313304 | 46313444 | 46313304 | ID=MS.gene47332.t1.exon9;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46313304 | 46313444 | 46313304 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46312946 | 46313062 | 46312946 | ID=MS.gene47332.t1.exon10;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46312946 | 46313062 | 46312946 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| chr1.1 | exon | 46312720 | 46312854 | 46312720 | ID=MS.gene47332.t1.exon11;Parent=MS.gene47332.t1 |
| chr1.1 | CDS | 46312720 | 46312854 | 46312720 | ID=cds.MS.gene47332.t1;Parent=MS.gene47332.t1 |
| Gene Sequence |
| Protein sequence |
