AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47838

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47838.t1 MTR_4g015460 92.917 480 32 2 25 502 27 506 0.0 923
MS.gene47838.t1 MTR_4g015420 81.646 474 84 2 26 496 51 524 0.0 806
MS.gene47838.t1 MTR_2g043200 68.433 453 138 2 45 496 70 518 0.0 632
MS.gene47838.t1 MTR_4g066330 66.526 475 146 8 26 496 27 492 0.0 631
MS.gene47838.t1 MTR_4g066280 63.430 484 160 10 17 496 22 492 0.0 613
MS.gene47838.t1 MTR_2g098520 59.267 491 161 9 36 497 30 510 0.0 578
MS.gene47838.t1 MTR_2g098540 57.545 497 172 8 30 497 21 507 0.0 568
MS.gene47838.t1 MTR_2g098790 57.258 496 173 9 30 496 28 513 0.0 562
MS.gene47838.t1 MTR_3g028720 56.385 509 175 10 17 496 23 513 0.0 556
MS.gene47838.t1 MTR_4g066240 56.237 489 175 7 39 498 35 513 0.0 555
MS.gene47838.t1 MTR_4g066580 54.894 521 191 9 5 496 9 514 0.0 555
MS.gene47838.t1 MTR_4g066210 54.095 525 202 9 1 496 4 518 0.0 552
MS.gene47838.t1 MTR_4g066590 58.351 485 163 8 40 495 33 507 0.0 551
MS.gene47838.t1 MTR_6g078450 56.531 490 174 7 40 500 36 515 0.0 551
MS.gene47838.t1 MTR_4g066240 56.122 490 175 8 39 498 35 514 0.0 551
MS.gene47838.t1 MTR_4g066640 55.403 509 190 9 17 498 16 514 0.0 544
MS.gene47838.t1 MTR_4g066630 56.495 485 172 7 40 495 39 513 0.0 537
MS.gene47838.t1 MTR_6g078330 55.689 501 181 9 31 500 26 516 0.0 535
MS.gene47838.t1 MTR_2g098540 57.692 468 159 8 59 497 6 463 0.0 535
MS.gene47838.t1 MTR_6g078380 55.714 490 179 7 40 500 36 516 0.0 520
MS.gene47838.t1 MTR_4g066340 58.691 443 145 7 84 498 8 440 3.05e-177 505
MS.gene47838.t1 MTR_5g071520 53.295 516 180 9 26 497 26 524 1.04e-176 507
MS.gene47838.t1 MTR_4g023000 50.503 497 201 9 29 496 13 493 6.49e-168 483
MS.gene47838.t1 MTR_3g026280 51.111 495 198 9 32 497 14 493 3.58e-167 481
MS.gene47838.t1 MTR_3g028720 55.385 455 156 10 17 442 23 459 2.62e-166 478
MS.gene47838.t1 MTR_6g078450 56.019 432 151 7 40 442 36 457 2.21e-163 471
MS.gene47838.t1 MTR_4g066630 54.988 431 155 7 40 441 39 459 1.84e-158 458
MS.gene47838.t1 MTR_4g083000 47.347 490 216 7 37 496 25 502 8.46e-157 456
MS.gene47838.t1 MTR_6g078330 55.450 422 150 7 107 500 1 412 1.42e-156 452
MS.gene47838.t1 MTR_3g026400 48.503 501 212 9 25 495 23 507 9.92e-155 451
MS.gene47838.t1 MTR_3g026620 48.310 503 217 10 21 495 21 508 5.25e-149 436
MS.gene47838.t1 MTR_4g066580 53.226 434 156 10 4 408 11 426 6.58e-147 427
MS.gene47838.t1 MTR_3g028720 54.157 421 146 10 17 408 23 425 8.14e-147 427
MS.gene47838.t1 MTR_5g044000 44.123 519 226 9 29 495 14 520 1.36e-146 430
MS.gene47838.t1 MTR_3g026400 47.966 467 202 7 57 495 23 476 3.57e-145 425
MS.gene47838.t1 MTR_6g078330 53.171 410 152 8 119 500 15 412 1.42e-142 416
MS.gene47838.t1 MTR_4g066240 52.618 401 151 7 39 410 35 425 1.32e-141 414
MS.gene47838.t1 MTR_4g081530 43.307 508 243 8 21 496 5 499 2.62e-141 416
MS.gene47838.t1 MTR_4g066630 54.545 396 141 7 40 406 39 424 8.04e-141 413
MS.gene47838.t1 MTR_4g067040 54.688 384 135 8 40 394 34 407 1.10e-135 398
MS.gene47838.t1 MTR_3g033790 44.328 476 234 7 39 496 18 480 6.81e-135 399
MS.gene47838.t1 MTR_4g131810 43.776 482 229 11 45 495 33 503 4.02e-134 398
MS.gene47838.t1 MTR_3g033810 43.697 476 238 8 39 496 20 483 1.41e-132 393
MS.gene47838.t1 MTR_2g079580 43.299 485 235 10 39 495 31 503 5.46e-131 390
MS.gene47838.t1 MTR_2g079550 42.887 485 237 10 39 495 29 501 4.47e-129 385
MS.gene47838.t1 MTR_2g022710 41.870 492 246 10 40 502 35 515 6.66e-129 385
MS.gene47838.t1 MTR_4g067040 59.133 323 104 5 40 334 34 356 1.33e-128 379
MS.gene47838.t1 MTR_3g028720 55.814 344 116 7 17 332 23 358 6.34e-128 378
MS.gene47838.t1 MTR_0110s0040 42.515 501 240 12 29 499 32 514 3.38e-127 380
MS.gene47838.t1 MTR_4g131800 44.016 493 239 8 34 499 510 992 1.36e-126 394
MS.gene47838.t1 MTR_2g022760 42.570 498 248 9 30 499 26 513 5.39e-126 377
MS.gene47838.t1 MTR_4g066640 56.509 338 121 6 17 328 16 353 1.24e-124 369
MS.gene47838.t1 MTR_0110s0030 40.964 498 252 10 29 499 32 514 3.61e-124 372
MS.gene47838.t1 MTR_4g066630 56.966 323 111 5 40 334 39 361 8.39e-124 367
MS.gene47838.t1 MTR_7g033860 40.720 528 259 13 6 498 6 514 4.06e-123 370
MS.gene47838.t1 MTR_4g083000 44.762 420 190 7 107 496 1 408 2.03e-119 357
MS.gene47838.t1 MTR_6g078330 53.892 334 124 6 31 334 26 359 6.99e-118 352
MS.gene47838.t1 MTR_0108s0030 40.292 479 232 8 42 498 5 451 6.87e-115 347
MS.gene47838.t1 MTR_7g068910 37.924 501 262 8 25 497 16 495 2.98e-112 342
MS.gene47838.t1 MTR_4g016920 40.580 483 236 8 42 495 29 489 3.94e-112 342
MS.gene47838.t1 MTR_5g068740 37.791 516 267 10 13 499 2 492 9.85e-112 341
MS.gene47838.t1 MTR_1g088610 39.175 485 242 9 41 496 28 488 2.67e-109 338
MS.gene47838.t1 MTR_1g088610 40.000 120 65 2 381 499 503 616 9.76e-19 89.7
MS.gene47838.t1 MTR_7g068910 37.182 511 262 9 25 497 16 505 4.02e-109 334
MS.gene47838.t1 MTR_7g051650 40.600 500 248 14 21 495 57 532 5.39e-109 334
MS.gene47838.t1 MTR_3g026400 51.198 334 129 7 25 329 23 351 3.47e-107 324
MS.gene47838.t1 MTR_7g051610 40.625 480 242 9 41 498 76 534 7.13e-107 329
MS.gene47838.t1 MTR_7g051650 40.200 500 246 14 21 495 57 528 1.33e-106 328
MS.gene47838.t1 MTR_7g051510 39.078 499 262 10 21 498 57 534 1.84e-106 328
MS.gene47838.t1 MTR_2g022710 40.371 431 219 8 40 442 35 455 1.19e-103 318
MS.gene47838.t1 MTR_2g022710 40.371 431 219 8 40 442 35 455 2.73e-103 318
MS.gene47838.t1 MTR_2g079580 42.929 396 187 9 39 406 31 415 1.84e-102 313
MS.gene47838.t1 MTR_2g022710 41.772 395 192 8 40 406 35 419 1.62e-99 306
MS.gene47838.t1 MTR_2g022760 41.667 420 208 8 107 499 1 410 1.91e-99 306
MS.gene47838.t1 MTR_2g022710 39.529 425 217 10 107 502 1 414 2.42e-97 300
MS.gene47838.t1 MTR_2g022710 40.992 383 188 8 40 394 35 407 1.47e-93 290
MS.gene47838.t1 MTR_1g088630 37.021 470 219 11 59 499 14 435 6.10e-93 290
MS.gene47838.t1 MTR_0110s0040 43.284 335 160 6 29 335 32 364 7.77e-89 278
MS.gene47838.t1 MTR_2g022710 41.880 351 172 6 40 363 35 380 1.01e-88 278
MS.gene47838.t1 MTR_7g068900 39.110 427 204 9 102 496 17 419 1.23e-88 280
MS.gene47838.t1 MTR_4g016920 39.048 420 205 8 107 497 1 398 1.33e-87 275
MS.gene47838.t1 MTR_7g056747 37.915 422 212 8 101 500 9 402 1.73e-86 272
MS.gene47838.t1 MTR_1g088630 42.949 312 122 8 42 325 29 312 1.37e-74 240
MS.gene47838.t1 MTR_1g088630 44.906 265 115 5 42 279 29 289 1.04e-68 223
MS.gene47838.t1 MTR_4g016920 42.308 286 135 5 107 364 1 284 8.49e-65 213
MS.gene47838.t1 MTR_0110s0020 42.083 240 113 3 29 244 32 269 4.22e-63 208
MS.gene47838.t1 MTR_4g122980 27.465 426 210 13 103 500 183 537 3.07e-30 125
MS.gene47838.t1 MTR_5g069350 45.000 120 36 4 387 496 89 188 1.47e-20 89.7
MS.gene47838.t1 MTR_8g038650 42.697 89 50 1 244 331 62 150 7.60e-15 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47838.t1 AT5G44640 47.505 501 218 9 29 499 20 505 2.51e-158 459
MS.gene47838.t1 AT2G44450 48.200 500 215 10 29 499 20 504 1.59e-157 457
MS.gene47838.t1 AT5G42260 47.667 493 213 9 29 491 20 497 7.09e-155 451
MS.gene47838.t1 AT1G26560 47.639 487 214 9 39 495 31 506 5.38e-151 441
MS.gene47838.t1 AT3G60130 45.984 498 224 8 29 496 19 501 9.07e-150 438
MS.gene47838.t1 AT2G44480 46.122 490 226 7 37 498 32 511 2.77e-147 432
MS.gene47838.t1 AT2G44480 46.122 490 226 7 37 498 63 542 6.25e-147 432
MS.gene47838.t1 AT2G44490 44.286 490 232 8 42 499 16 496 3.05e-146 431
MS.gene47838.t1 AT2G25630 45.363 496 211 9 29 495 19 483 1.29e-145 427
MS.gene47838.t1 AT3G60120 45.219 502 223 9 32 497 6 491 5.79e-145 427
MS.gene47838.t1 AT5G24550 46.436 491 221 8 40 498 32 512 1.81e-144 425
MS.gene47838.t1 AT5G54570 45.051 495 226 10 34 495 24 505 2.16e-144 425
MS.gene47838.t1 AT3G60140 46.356 494 220 10 36 496 22 503 1.20e-140 417
MS.gene47838.t1 AT5G24540 45.902 488 228 8 40 498 32 512 6.68e-139 411
MS.gene47838.t1 AT5G36890 44.842 475 232 7 41 496 17 480 1.70e-138 408
MS.gene47838.t1 AT5G36890 44.842 475 232 7 41 496 17 480 2.49e-138 408
MS.gene47838.t1 AT1G51470 45.155 485 225 10 36 495 41 509 1.42e-135 402
MS.gene47838.t1 AT1G47600 44.948 485 226 11 36 495 41 509 2.61e-134 399
MS.gene47838.t1 AT3G03640 43.373 498 241 8 31 496 25 513 4.75e-134 399
MS.gene47838.t1 AT3G18080 43.763 489 228 10 40 498 39 510 1.76e-133 396
MS.gene47838.t1 AT2G44460 44.960 496 235 7 30 496 19 505 4.28e-133 398
MS.gene47838.t1 AT1G47600 44.948 485 225 12 36 495 41 508 5.03e-133 395
MS.gene47838.t1 AT3G09260 42.449 490 244 6 37 497 32 512 1.98e-130 389
MS.gene47838.t1 AT1G75940 41.833 502 250 8 29 495 23 517 2.47e-130 389
MS.gene47838.t1 AT2G44470 42.000 500 247 9 28 495 17 505 1.49e-129 389
MS.gene47838.t1 AT3G18070 43.265 490 223 12 40 499 30 494 2.62e-129 385
MS.gene47838.t1 AT1G66280 43.737 487 233 8 39 495 35 510 4.41e-129 385
MS.gene47838.t1 AT3G18070 43.469 490 228 12 40 499 30 500 6.55e-129 384
MS.gene47838.t1 AT1G66270 42.578 512 235 11 21 495 21 510 2.66e-128 384
MS.gene47838.t1 AT3G60130 46.118 425 185 7 101 496 40 449 6.10e-127 378
MS.gene47838.t1 AT2G32860 40.675 504 257 10 30 501 84 577 2.38e-126 382
MS.gene47838.t1 AT1G66270 42.383 512 234 12 21 495 21 508 4.95e-126 378
MS.gene47838.t1 AT2G32860 40.079 509 252 12 30 501 84 576 5.08e-126 380
MS.gene47838.t1 AT1G61820 41.889 487 244 10 41 498 31 507 6.27e-126 377
MS.gene47838.t1 AT1G52400 41.517 501 248 10 28 496 29 516 7.88e-126 377
MS.gene47838.t1 AT1G52400 41.517 501 248 10 28 496 29 516 7.88e-126 377
MS.gene47838.t1 AT3G21370 42.480 492 236 11 40 496 33 512 2.09e-124 374
MS.gene47838.t1 AT5G28510 40.438 502 254 8 28 495 29 519 4.44e-123 370
MS.gene47838.t1 AT2G44480 45.346 419 192 6 107 498 1 409 7.55e-123 366
MS.gene47838.t1 AT3G60130 45.283 424 179 7 101 496 40 438 1.21e-122 367
MS.gene47838.t1 AT4G21760 41.529 484 241 11 45 501 59 527 1.70e-121 367
MS.gene47838.t1 AT5G25980 42.008 488 240 12 39 496 49 523 2.58e-119 361
MS.gene47838.t1 AT5G26000 42.094 487 238 10 40 495 38 511 3.51e-119 361
MS.gene47838.t1 AT5G54570 42.630 441 208 9 34 442 24 451 2.10e-118 355
MS.gene47838.t1 AT4G21760 40.994 483 235 11 45 501 59 517 2.56e-118 358
MS.gene47838.t1 AT5G54570 44.893 421 187 9 107 495 1 408 3.07e-117 352
MS.gene47838.t1 AT1G61810 39.754 488 255 9 40 498 33 510 8.75e-115 349
MS.gene47838.t1 AT1G02850 40.491 489 237 11 37 496 23 486 1.38e-113 345
MS.gene47838.t1 AT4G27830 39.192 495 251 10 29 495 12 484 6.23e-113 343
MS.gene47838.t1 AT5G24540 43.721 430 207 7 40 441 32 454 1.23e-111 338
MS.gene47838.t1 AT3G62750 38.477 486 254 11 29 495 14 473 4.19e-111 338
MS.gene47838.t1 AT3G62750 38.477 486 254 11 29 495 40 499 6.65e-111 339
MS.gene47838.t1 AT1G02850 38.672 512 237 11 37 496 23 509 5.02e-110 337
MS.gene47838.t1 AT1G61810 40.430 465 239 9 40 475 33 488 1.27e-108 333
MS.gene47838.t1 AT1G02850 38.596 513 237 12 37 496 23 510 3.56e-108 332
MS.gene47838.t1 AT4G27820 38.540 493 249 11 31 495 16 482 1.04e-107 330
MS.gene47838.t1 AT3G60140 45.679 405 176 9 36 408 22 414 3.94e-107 327
MS.gene47838.t1 AT1G02850 39.549 488 216 11 37 496 23 459 4.67e-107 327
MS.gene47838.t1 AT2G44470 40.449 445 223 8 28 441 17 450 3.00e-106 325
MS.gene47838.t1 AT4G22100 38.969 485 247 11 41 498 23 485 8.04e-105 323
MS.gene47838.t1 AT2G44450 46.196 368 155 9 160 499 1 353 1.97e-103 314
MS.gene47838.t1 AT3G62740 36.437 494 258 12 29 495 14 478 1.14e-101 314
MS.gene47838.t1 AT1G60090 37.810 484 250 11 40 496 24 483 1.08e-100 312
MS.gene47838.t1 AT1G52400 40.000 445 223 9 28 441 29 460 2.61e-100 310
MS.gene47838.t1 AT5G25980 40.741 432 215 10 39 442 49 467 4.50e-100 309
MS.gene47838.t1 AT5G25980 40.741 432 215 10 39 442 49 467 4.50e-100 309
MS.gene47838.t1 AT1G45191 37.888 483 245 9 41 496 30 484 8.46e-100 310
MS.gene47838.t1 AT1G45191 37.681 483 257 9 41 496 30 495 1.32e-98 307
MS.gene47838.t1 AT5G26000 40.509 432 215 8 40 442 38 456 1.54e-98 305
MS.gene47838.t1 AT1G45191 37.681 483 252 10 41 496 30 490 1.78e-98 306
MS.gene47838.t1 AT1G60090 37.143 490 252 12 40 496 24 490 3.50e-98 306
MS.gene47838.t1 AT1G45191 37.475 491 259 10 41 496 30 507 2.75e-97 304
MS.gene47838.t1 AT3G62750 37.558 434 227 10 29 444 40 447 1.49e-93 292
MS.gene47838.t1 AT2G44470 44.277 332 157 5 28 331 17 348 3.81e-93 289
MS.gene47838.t1 AT2G44480 48.243 313 134 6 37 322 63 374 2.19e-92 287
MS.gene47838.t1 AT1G61810 38.095 420 222 8 107 498 1 410 2.68e-88 277
MS.gene47838.t1 AT5G48375 38.851 435 193 12 39 460 37 411 1.50e-87 276
MS.gene47838.t1 AT4G27830 37.650 417 211 9 107 495 1 396 5.06e-87 274
MS.gene47838.t1 AT3G62740 36.574 432 219 11 29 434 14 416 9.82e-87 273
MS.gene47838.t1 AT3G62750 42.769 325 160 7 29 335 14 330 2.06e-86 271
MS.gene47838.t1 AT3G62750 42.769 325 160 7 29 335 14 330 2.06e-86 271
MS.gene47838.t1 AT1G02850 38.480 421 189 9 37 406 23 424 1.80e-85 270
MS.gene47838.t1 AT3G62750 42.769 325 160 7 29 335 40 356 3.20e-85 270
MS.gene47838.t1 AT3G18070 44.025 318 148 6 40 331 30 343 4.40e-85 268
MS.gene47838.t1 AT3G62750 36.520 408 220 9 107 495 1 388 1.21e-83 265
MS.gene47838.t1 AT3G62750 36.520 408 220 9 107 495 1 388 1.21e-83 265
MS.gene47838.t1 AT1G61810 37.626 396 209 8 40 406 33 419 4.87e-83 264
MS.gene47838.t1 AT4G27820 36.691 417 216 9 107 495 1 397 6.75e-82 261
MS.gene47838.t1 AT4G27820 36.691 417 216 9 107 495 1 397 6.75e-82 261
MS.gene47838.t1 AT1G61820 39.037 374 191 8 153 498 4 368 2.34e-81 258
MS.gene47838.t1 AT2G44460 42.391 368 174 7 158 496 1 359 8.45e-81 258
MS.gene47838.t1 AT1G60270 40.805 348 166 8 40 360 24 358 2.55e-77 247
MS.gene47838.t1 AT1G45191 41.325 317 154 5 41 331 30 340 1.04e-75 244
MS.gene47838.t1 AT1G45191 41.325 317 154 5 41 331 30 340 1.08e-75 244
MS.gene47838.t1 AT3G18070 40.290 345 161 10 185 499 94 423 9.34e-70 229
MS.gene47838.t1 AT3G18070 53.226 62 29 0 40 101 30 91 7.28e-16 80.1
MS.gene47838.t1 AT2G44480 41.135 282 153 4 220 498 34 305 1.35e-68 223
MS.gene47838.t1 AT1G51490 39.169 337 174 7 47 359 27 356 6.34e-67 221
MS.gene47838.t1 AT3G18070 42.657 286 143 8 220 499 41 311 9.53e-65 213
MS.gene47838.t1 AT1G61810 40.892 269 132 4 40 282 33 300 1.46e-64 212
MS.gene47838.t1 AT1G60270 38.434 281 136 7 107 360 1 271 3.87e-51 176
MS.gene47838.t1 AT3G18070 37.008 254 118 8 185 408 94 335 4.34e-38 142
MS.gene47838.t1 AT3G18070 53.226 62 29 0 40 101 30 91 3.91e-16 80.1
MS.gene47838.t1 AT5G16580 33.219 292 152 10 185 452 27 299 5.19e-35 133
MS.gene47838.t1 AT3G18070 38.500 200 105 6 215 408 36 223 3.41e-33 126
MS.gene47838.t1 AT3G06510 25.586 512 275 14 49 500 83 548 4.43e-32 130
MS.gene47838.t1 AT3G06510 25.646 503 252 15 49 500 83 514 9.20e-30 123

Find 107 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGAACATAATAGAATTAT+TGG 0.142938 4.4:+84991086 MS.gene47838:CDS
GATATATGCTTCAAGGAATT+TGG 0.182257 4.4:+84989552 MS.gene47838:CDS
GAGCAATCTAAGAGTCTTAT+TGG 0.231240 4.4:+84989997 MS.gene47838:CDS
ACTGTTAATGTGACTTTAAC+AGG 0.248704 4.4:+84990138 MS.gene47838:CDS
GGGGAAGATCCCAATGAAAA+AGG 0.264707 4.4:-84988992 None:intergenic
CAGGCTCAAAATGGTATAAT+AGG 0.277472 4.4:+84989708 MS.gene47838:CDS
ACGATTATCATAACAGAAAA+TGG 0.280720 4.4:+84990462 MS.gene47838:CDS
ATACTTTGCATGGTCCCTTT+TGG 0.290939 4.4:+84990950 MS.gene47838:CDS
TACAAAACGTACCTGGTAAT+TGG 0.306037 4.4:-84986635 None:intergenic
AGCTCTCTGCCCGGTGGTTT+AGG 0.309537 4.4:+84991057 MS.gene47838:CDS
GACGGATACACTGTGCGTTT+TGG 0.311280 4.4:+84990990 MS.gene47838:CDS
ATGTTTGTCCAAAGGGGATT+CGG 0.336791 4.4:+84990400 MS.gene47838:CDS
ACCACATATCAGGCTCAAAA+TGG 0.345183 4.4:+84989699 MS.gene47838:CDS
TCTAATGGGTCAGTTGAGTA+TGG 0.349718 4.4:-84989759 None:intergenic
GACGCCCTTGATTTCATGTT+TGG 0.356653 4.4:+84989798 MS.gene47838:CDS
GCAGTGAACGTTGGTAAATC+TGG 0.366493 4.4:-84989973 None:intergenic
TGATCACTATCATCGTTATA+AGG 0.379609 4.4:+84988404 MS.gene47838:CDS
CAATATCCTTGGCCAAGATA+TGG 0.382965 4.4:-84988687 None:intergenic
GATCCAGACTGTATAGGAAT+TGG 0.386737 4.4:-84990081 None:intergenic
AGGCAAGGTGTGAATGTAAA+AGG 0.387936 4.4:+84990927 MS.gene47838:intron
CTATTACTTGGCAATATCCT+TGG 0.390771 4.4:-84988698 None:intergenic
TGTTTGTCCAAAGGGGATTC+GGG 0.400286 4.4:+84990401 MS.gene47838:CDS
TCCATTCAAAGTTGTCCAAA+AGG 0.405927 4.4:-84990965 None:intergenic
TGGCTATATGTTTGTCCAAA+GGG 0.410402 4.4:+84990393 MS.gene47838:CDS
CATACAGATTCTCCATATCT+TGG 0.418726 4.4:+84988675 MS.gene47838:CDS
TTTATACAGCCGCTAACAAC+AGG 0.426920 4.4:+84989919 MS.gene47838:CDS
ATACTCATCTTGTAAGGCCT+GGG 0.427696 4.4:-84989012 None:intergenic
ATCAATGAGCTACTTGCTAA+TGG 0.429019 4.4:+84988861 MS.gene47838:CDS
CAGGCCTTACAAGATGAGTA+TGG 0.435383 4.4:+84989014 MS.gene47838:CDS
GCATAAATAGAGGCAATAAC+AGG 0.437739 4.4:-84986550 None:intergenic
ATTGTATAAAACCACATATC+AGG 0.437772 4.4:+84989689 MS.gene47838:CDS
ACATAAGACACCAAGCTTGC+TGG 0.447607 4.4:-84989949 None:intergenic
AACCACCGGGCAGAGAGCTT+AGG 0.450563 4.4:-84991053 None:intergenic
AGTGAAGATGGAAGAGGAAA+GGG 0.452598 4.4:+84987616 MS.gene47838:CDS
ATGGAAGAGGAAAGGGTACA+TGG 0.453182 4.4:+84987623 MS.gene47838:CDS
CATACTCATCTTGTAAGGCC+TGG 0.455210 4.4:-84989013 None:intergenic
AGTAGGTCCCGAATCCCCTT+TGG 0.457019 4.4:-84990408 None:intergenic
ATGACAGATAAGAATAAAGA+TGG 0.458312 4.4:+84990271 MS.gene47838:intron
CCGCCTGATCCAGACTGTAT+AGG 0.458956 4.4:-84990087 None:intergenic
TAGCAAGTAGCTCATTGATC+AGG 0.461889 4.4:-84988857 None:intergenic
ACACTTTGAATACATCAGAT+TGG 0.462336 4.4:+84989619 MS.gene47838:CDS
ACCATCCAAACATGAAATCA+AGG 0.473106 4.4:-84989803 None:intergenic
CTTCGTGGATATATGCTTCA+AGG 0.473903 4.4:+84989545 MS.gene47838:CDS
ACCACCGGGCAGAGAGCTTA+GGG 0.475465 4.4:-84991052 None:intergenic
GTATATATGTACCTGGTGTA+TGG 0.475730 4.4:-84987657 None:intergenic
ATCACTCGAAGAGGCGCTCA+TGG 0.478154 4.4:+84990731 MS.gene47838:CDS
TTGGAGACAGAGTAAAGCAT+TGG 0.480355 4.4:+84989571 MS.gene47838:CDS
GAAGGTGCTGTAAGTGAAGA+TGG 0.482306 4.4:+84987604 MS.gene47838:CDS
AATAAAGATGGGACATACAT+TGG 0.483048 4.4:+84990283 MS.gene47838:CDS
ATTCCTATACAGTCTGGATC+AGG 0.483543 4.4:+84990084 MS.gene47838:CDS
CAAAATGGTATAATAGGCAT+TGG 0.486147 4.4:+84989714 MS.gene47838:CDS
GCATTGGATTAAACTCTCAC+TGG 0.490284 4.4:+84989730 MS.gene47838:CDS
AGCAATCTAAGAGTCTTATT+GGG 0.490733 4.4:+84989998 MS.gene47838:CDS
GCCTCCATACTCATCTTGTA+AGG 0.497866 4.4:-84989018 None:intergenic
CCATTCAAAGTTGTCCAAAA+GGG 0.499789 4.4:-84990964 None:intergenic
CCCTTGATTTCATGTTTGGA+TGG 0.504970 4.4:+84989802 MS.gene47838:CDS
TGGAGACAGAGTAAAGCATT+GGG 0.508305 4.4:+84989572 MS.gene47838:CDS
TCTGGATCAGGCGGCGCTGA+CGG 0.508743 4.4:+84990096 MS.gene47838:CDS
CAGCTGCATGAGCAAGAAGT+TGG 0.509222 4.4:-84989659 None:intergenic
AGGAATTGGTTTCGTTGCAT+TGG 0.510612 4.4:-84990067 None:intergenic
AAACCAATTCCTATACAGTC+TGG 0.511299 4.4:+84990078 MS.gene47838:CDS
AAAACTGTCAGCATAAATAG+AGG 0.520509 4.4:-84986560 None:intergenic
AGGAAAGTATCCAGCAAGCT+TGG 0.526086 4.4:+84989939 MS.gene47838:CDS
GACAACTTTGAATGGAATGA+CGG 0.527539 4.4:+84990972 MS.gene47838:CDS
GGATACTTTCCTGTTGTTAG+CGG 0.535598 4.4:-84989928 None:intergenic
TACTGGCTCCTCCAATTACC+AGG 0.536244 4.4:+84986624 MS.gene47838:CDS
GAAGTTGGTTGTGTGTGGCC+TGG 0.537777 4.4:-84989644 None:intergenic
GTGGACAAAGTAACTAATCA+TGG 0.537992 4.4:+84984974 MS.gene47838:CDS
AATATGTGCAGGCTGCAACT+TGG 0.539391 4.4:+84990373 MS.gene47838:intron
AAGTGAAGATGGAAGAGGAA+AGG 0.544229 4.4:+84987615 MS.gene47838:CDS
CAAGAAACTTCCTAAACCAC+CGG 0.545200 4.4:-84991067 None:intergenic
TTGGCTATATGTTTGTCCAA+AGG 0.547740 4.4:+84990392 MS.gene47838:CDS
TTTCCTTTGTGTACAACAGT+AGG 0.554600 4.4:-84990425 None:intergenic
ACTGCATACAGGGATGGTAA+AGG 0.570057 4.4:+84988356 MS.gene47838:intron
GTATTCAAAGTGTAAGAGAA+TGG 0.570526 4.4:-84989609 None:intergenic
GATTCTCCATATCTTGGCCA+AGG 0.571513 4.4:+84988681 MS.gene47838:CDS
GACACCCTAAGCTCTCTGCC+CGG 0.573913 4.4:+84991048 MS.gene47838:CDS
GTGTTGATAATGTAGTATGA+AGG 0.577599 4.4:+84987586 MS.gene47838:intron
GCTGTAAGTGAAGATGGAAG+AGG 0.581432 4.4:+84987610 MS.gene47838:CDS
TGGGACATACATTGGAGCAT+GGG 0.581493 4.4:+84990291 MS.gene47838:CDS
ATGGGACATACATTGGAGCA+TGG 0.582897 4.4:+84990290 MS.gene47838:CDS
TGGAAGAGGAAAGGGTACAT+GGG 0.585427 4.4:+84987624 MS.gene47838:CDS
TGTAAAATATGATTCCTGCT+TGG 0.587277 4.4:-84988830 None:intergenic
TATATATGTACCTGGTGTAT+GGG 0.589583 4.4:-84987656 None:intergenic
GAATACATCAGATTGGTACC+AGG 0.597455 4.4:+84989626 MS.gene47838:CDS
AAAACGTACCTGGTAATTGG+AGG 0.599628 4.4:-84986632 None:intergenic
GATATATTTGCCCATACACC+AGG 0.601896 4.4:+84987646 MS.gene47838:CDS
GATTGCTCTGCAGTGAACGT+TGG 0.602380 4.4:-84989982 None:intergenic
GGCTATATGTTTGTCCAAAG+GGG 0.602874 4.4:+84990394 MS.gene47838:CDS
CATACAGGGATGGTAAAGGA+TGG 0.607856 4.4:+84988360 MS.gene47838:intron
GGGGAAAGGTCATGGTTGTG+TGG 0.609678 4.4:+84984955 MS.gene47838:CDS
TGACAGATAAGAATAAAGAT+GGG 0.612129 4.4:+84990272 MS.gene47838:intron
ATGTAAAAGGATACTTTGCA+TGG 0.622027 4.4:+84990940 MS.gene47838:CDS
AGTGGCGGTGTAAACCAAGC+AGG 0.626808 4.4:+84988816 MS.gene47838:CDS
AGCAAGAAGTTGGTTGTGTG+TGG 0.636210 4.4:-84989649 None:intergenic
CCATCCAAACATGAAATCAA+GGG 0.640294 4.4:-84989802 None:intergenic
TACTCATCTTGTAAGGCCTG+GGG 0.645812 4.4:-84989011 None:intergenic
TGCATTGGCAGCATACATGC+TGG 0.650774 4.4:-84990052 None:intergenic
CCTATACAGTCTGGATCAGG+CGG 0.652705 4.4:+84990087 MS.gene47838:CDS
TATGCAGAAGGAAAACTAAG+TGG 0.653344 4.4:+84988798 MS.gene47838:intron
TCCTACACTATCACTCGAAG+AGG 0.658030 4.4:+84990722 MS.gene47838:CDS
AAGAAACTTCCTAAACCACC+GGG 0.661886 4.4:-84991066 None:intergenic
GGACCTACTGTTGTACACAA+AGG 0.673741 4.4:+84990422 MS.gene47838:CDS
ACCCTAAGCTCTCTGCCCGG+TGG 0.683098 4.4:+84991051 MS.gene47838:CDS
GCAGAAGGAAAACTAAGTGG+CGG 0.686824 4.4:+84988801 MS.gene47838:intron
GCCTTACAAGATGAGTATGG+AGG 0.687554 4.4:+84989017 MS.gene47838:CDS
GCCTCTTCGAGTGATAGTGT+AGG 0.709813 4.4:-84990723 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGATTTCAAATTATA+CGG - chr4.4:84989886-84989905 None:intergenic 10.0%
!! AAAATAAAGAAAACAAATAA+TGG - chr4.4:84985184-84985203 None:intergenic 10.0%
!! AAATAAAGAAAACAAATAAT+GGG - chr4.4:84985183-84985202 None:intergenic 10.0%
!! AAATAGATAAAAAAAATTGA+AGG - chr4.4:84987921-84987940 None:intergenic 10.0%
!! TTAAATGAAGAAAAAAAATT+GGG - chr4.4:84986128-84986147 None:intergenic 10.0%
!! TTCTAATAAATTTAAATCAT+AGG + chr4.4:84990681-84990700 MS.gene47838:intron 10.0%
!! TTTAAATGAAGAAAAAAAAT+TGG - chr4.4:84986129-84986148 None:intergenic 10.0%
!!! AATATATTTTTTTACACTAT+CGG - chr4.4:84988145-84988164 None:intergenic 10.0%
!!! ATTATTTGTTTTCTTTATTT+TGG + chr4.4:84985183-84985202 MS.gene47838:intron 10.0%
!!! ATTGAATAAATTTTATTTAG+AGG + chr4.4:84985986-84986005 MS.gene47838:intron 10.0%
!!! ATTTCATTAATGTTTATTTT+AGG + chr4.4:84986520-84986539 MS.gene47838:intron 10.0%
!!! ATTTTTTTTCTTCATTTAAA+TGG + chr4.4:84986129-84986148 MS.gene47838:intron 10.0%
!!! TTCAATTTTTTTTATCTATT+TGG + chr4.4:84987920-84987939 MS.gene47838:intron 10.0%
!!! TTTATTCTTTTATTTATAGT+TGG + chr4.4:84986063-84986082 MS.gene47838:intron 10.0%
!!! TTTCATTAATGTTTATTTTA+GGG + chr4.4:84986521-84986540 MS.gene47838:intron 10.0%
!! AAAATAAAGAAAACAAAGAA+AGG + chr4.4:84985066-84985085 MS.gene47838:intron 15.0%
!! AAATAAAGAAAACAAAGAAA+GGG + chr4.4:84985067-84985086 MS.gene47838:intron 15.0%
!! ATTCAAGAAATAATAAATTG+AGG + chr4.4:84989447-84989466 MS.gene47838:intron 15.0%
!! CAATCAATTATAGATAAAAT+TGG + chr4.4:84985724-84985743 MS.gene47838:intron 15.0%
!! CATTTAATGATGTATATATA+TGG + chr4.4:84986839-84986858 MS.gene47838:intron 15.0%
!! GTAATAGAAAATGTTTAATT+TGG + chr4.4:84988714-84988733 MS.gene47838:intron 15.0%
!! TATATATATGGTTCATAATA+TGG + chr4.4:84986851-84986870 MS.gene47838:intron 15.0%
!! TATGATATACTAATAAAGTA+TGG - chr4.4:84988901-84988920 None:intergenic 15.0%
!! TATTATTGAATCTTAAGAAT+TGG + chr4.4:84987535-84987554 MS.gene47838:intron 15.0%
!! TCAAAACTAATATATTTGTT+GGG - chr4.4:84985409-84985428 None:intergenic 15.0%
!! TTATTTAAGAAATTGAAACT+GGG - chr4.4:84987275-84987294 None:intergenic 15.0%
!! TTCAAAACTAATATATTTGT+TGG - chr4.4:84985410-84985429 None:intergenic 15.0%
!! TTCATAATAATACAAATTGA+TGG + chr4.4:84988936-84988955 MS.gene47838:intron 15.0%
!! TTTATTTAAGAAATTGAAAC+TGG - chr4.4:84987276-84987295 None:intergenic 15.0%
!!! AAATAATTTTAGTGATCAAA+AGG + chr4.4:84988510-84988529 MS.gene47838:intron 15.0%
!!! ATTAAACATTTTCTATTACT+TGG - chr4.4:84988713-84988732 None:intergenic 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG + chr4.4:84986912-84986931 MS.gene47838:intron 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG - chr4.4:84986931-84986912 None:intergenic 15.0%
!!! CAATAACTATTTTAAAAAGT+TGG - chr4.4:84985770-84985789 None:intergenic 15.0%
!!! GGAATTAAACATAATTTTTT+TGG - chr4.4:84986738-84986757 None:intergenic 15.0%
!!! TAAAAAAGTGTTTTTATTCT+TGG - chr4.4:84985939-84985958 None:intergenic 15.0%
!!! TAATTAAGTTTTATTGTTCT+TGG - chr4.4:84986444-84986463 None:intergenic 15.0%
!!! TATATTAGTTTTGAATTAGT+TGG + chr4.4:84985415-84985434 MS.gene47838:intron 15.0%
!!! TTAACTATATTGTTGTTTTT+TGG + chr4.4:84990892-84990911 MS.gene47838:intron 15.0%
!!! TTCATTAATGTTTATTTTAG+GGG + chr4.4:84986522-84986541 MS.gene47838:intron 15.0%
!! AAAACAATTTATGTCAAACA+AGG - chr4.4:84990239-84990258 None:intergenic 20.0%
!! AATAAAGAAAACAAAGAAAG+GGG + chr4.4:84985068-84985087 MS.gene47838:intron 20.0%
!! AATAATCTATCTGTTTACAT+TGG + chr4.4:84985673-84985692 MS.gene47838:intron 20.0%
!! ATAAAAAAAATTGAAGGTCT+TGG - chr4.4:84987915-84987934 None:intergenic 20.0%
!! ATATAAATCATCTGAAAGTT+TGG - chr4.4:84988021-84988040 None:intergenic 20.0%
!! ATTCTGATTTAAGTAAATAG+AGG - chr4.4:84990822-84990841 None:intergenic 20.0%
!! CATAAAAAAAAATACCTTGA+AGG + chr4.4:84986249-84986268 MS.gene47838:intron 20.0%
!! CTTGAACATAATAGAATTAT+TGG + chr4.4:84991086-84991105 MS.gene47838:CDS 20.0%
!! GAAATTATATATCACATTAG+AGG - chr4.4:84988432-84988451 None:intergenic 20.0%
!! GATGTATCTGATTTATATTA+TGG + chr4.4:84987491-84987510 MS.gene47838:intron 20.0%
!! TAAAAAAAATTGAAGGTCTT+GGG - chr4.4:84987914-84987933 None:intergenic 20.0%
!! TAAGGATAAAATACTTCTTT+AGG - chr4.4:84986017-84986036 None:intergenic 20.0%
!! TATATATGTATATATGTACC+TGG - chr4.4:84987667-84987686 None:intergenic 20.0%
!! TATTACTTTCTCTAAATTTC+TGG - chr4.4:84987415-84987434 None:intergenic 20.0%
!! TTACATAAAGAGAAATTCTT+AGG + chr4.4:84986943-84986962 MS.gene47838:intron 20.0%
!! TTCCTATTAAGATGTAAAAA+TGG - chr4.4:84988621-84988640 None:intergenic 20.0%
!! TTCTGATTTAAGTAAATAGA+GGG - chr4.4:84990821-84990840 None:intergenic 20.0%
!!! AACCATTTTTACATCTTAAT+AGG + chr4.4:84988616-84988635 MS.gene47838:intron 20.0%
!!! AATCTTTTTTATCTGTTTAC+AGG + chr4.4:84989896-84989915 MS.gene47838:intron 20.0%
!!! AGAGAAAAATTAGAATGTTT+TGG + chr4.4:84989108-84989127 MS.gene47838:intron 20.0%
!!! ATAAGCAAAATTCACTTTTT+AGG - chr4.4:84986830-84986811 None:intergenic 20.0%
!!! ATCATATTTTTCTTCTAATG+TGG + chr4.4:84988322-84988341 MS.gene47838:intron 20.0%
!!! CAAAACTAATATATTTGTTG+GGG - chr4.4:84985408-84985427 None:intergenic 20.0%
!!! TATTGTTTCATTCTTGTTTT+CGG + chr4.4:84984934-84984953 MS.gene47838:CDS 20.0%
!!! TCTTTTCTTATATTTTAGAC+CGG - chr4.4:84987444-84987463 None:intergenic 20.0%
!!! TTATTTTTGCCTTTTTAAGA+GGG - chr4.4:84985053-84985072 None:intergenic 20.0%
!!! TTTATTTTTGCCTTTTTAAG+AGG - chr4.4:84985054-84985073 None:intergenic 20.0%
! AAACCAACATAGTAAACTTA+AGG - chr4.4:84986035-84986054 None:intergenic 25.0%
! AAATAGAACATTGGAAGAAA+TGG - chr4.4:84986162-84986181 None:intergenic 25.0%
! AAGATATATAGACAAGTCAT+AGG + chr4.4:84988066-84988085 MS.gene47838:intron 25.0%
! AATTCCTAATGCTATAAGAT+TGG + chr4.4:84986752-84986771 MS.gene47838:intron 25.0%
! AATTTGAAAATGAACCTTCA+AGG - chr4.4:84986266-84986285 None:intergenic 25.0%
! ACGATTATCATAACAGAAAA+TGG + chr4.4:84990462-84990481 MS.gene47838:CDS 25.0%
! ATAAAGAAAACAAAGAAAGG+GGG + chr4.4:84985069-84985088 MS.gene47838:intron 25.0%
! ATCTTAGTAATAAGTGAACA+TGG - chr4.4:84986294-84986313 None:intergenic 25.0%
! ATGACAGATAAGAATAAAGA+TGG + chr4.4:84990271-84990290 MS.gene47838:intron 25.0%
! ATGTAGACTGATTATAATTG+GGG - chr4.4:84987970-84987989 None:intergenic 25.0%
! ATTCTAATGTTAGTTAGTTG+TGG - chr4.4:84989401-84989420 None:intergenic 25.0%
! ATTGTATAAAACCACATATC+AGG + chr4.4:84989689-84989708 MS.gene47838:CDS 25.0%
! CATGTAGACTGATTATAATT+GGG - chr4.4:84987971-84987990 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG - chr4.4:84986878-84986897 None:intergenic 25.0%
! CGAAAGAAAAAATAGAACAT+TGG - chr4.4:84986171-84986190 None:intergenic 25.0%
! GTTTATTAGACACTGAAAAA+AGG - chr4.4:84990648-84990667 None:intergenic 25.0%
! TAACTAACTAGTTAGTTAGT+TGG - chr4.4:84989341-84989360 None:intergenic 25.0%
! TAGATTTAGTTGTAATTGTC+TGG + chr4.4:84985548-84985567 MS.gene47838:intron 25.0%
! TATCCTTAAGTTTACTATGT+TGG + chr4.4:84986029-84986048 MS.gene47838:intron 25.0%
! TATTGAATCTTAAGAATTGG+AGG + chr4.4:84987538-84987557 MS.gene47838:intron 25.0%
! TCATGTAGACTGATTATAAT+TGG - chr4.4:84987972-84987991 None:intergenic 25.0%
! TGACAGATAAGAATAAAGAT+GGG + chr4.4:84990272-84990291 MS.gene47838:intron 25.0%
! TTATTAGAACCCTCTTAAAA+AGG + chr4.4:84985041-84985060 MS.gene47838:intron 25.0%
!! AATATGCAGAGATGATTTTA+AGG + chr4.4:84989521-84989540 MS.gene47838:intron 25.0%
!! ATTATCTTTTATCTGCAATG+AGG + chr4.4:84990790-84990809 MS.gene47838:CDS 25.0%
!! ATTGGGTCATATGATTTTAT+TGG + chr4.4:84990015-84990034 MS.gene47838:CDS 25.0%
!! GTTTGACATAAATTGTTTTC+TGG + chr4.4:84990240-84990259 MS.gene47838:intron 25.0%
!! TCTTTTCTTCAATATCTAAC+AGG - chr4.4:84988230-84988249 None:intergenic 25.0%
!! TTTTCTGTTATGATAATCGT+AGG - chr4.4:84990462-84990481 None:intergenic 25.0%
!! TTTTCTTCTAATGTGGTAAT+TGG + chr4.4:84988329-84988348 MS.gene47838:intron 25.0%
!!! AACAAGTTGATAATCCAAAT+CGG - chr4.4:84985139-84985158 None:intergenic 25.0%
!!! ATTAATGTTTATTTTAGGGG+CGG + chr4.4:84986525-84986544 MS.gene47838:intron 25.0%
!!! ATTGTTTCATTCTTGTTTTC+GGG + chr4.4:84984935-84984954 MS.gene47838:CDS 25.0%
!!! GATATGTGTCATGTTTTAAT+TGG + chr4.4:84987320-84987339 MS.gene47838:intron 25.0%
!!! TATGCTTTTGCTTTTTGTAA+CGG + chr4.4:84986705-84986724 MS.gene47838:intron 25.0%
!!! TTATTTTGGCCTTTTTAAGA+GGG + chr4.4:84985197-84985216 MS.gene47838:intron 25.0%
!!! TTTATTTTGGCCTTTTTAAG+AGG + chr4.4:84985196-84985215 MS.gene47838:intron 25.0%
!!! TTTTTTGGTTTTTTGTGTGA+AGG + chr4.4:84990907-84990926 MS.gene47838:intron 25.0%
AAAACTGTCAGCATAAATAG+AGG - chr4.4:84986563-84986582 None:intergenic 30.0%
AAACCAAAACCCTCTTAAAA+AGG - chr4.4:84985209-84985228 None:intergenic 30.0%
AAATCAACTATGTTGTTGGT+TGG - chr4.4:84989376-84989395 None:intergenic 30.0%
AACAACTAAACAATATGTGC+AGG + chr4.4:84990362-84990381 MS.gene47838:intron 30.0%
AACACTTGAAATAGCAGAAA+GGG + chr4.4:84987141-84987160 MS.gene47838:intron 30.0%
AACTCTAACAAATATGCAGA+AGG + chr4.4:84988786-84988805 MS.gene47838:intron 30.0%
AATAAAGATGGGACATACAT+TGG + chr4.4:84990283-84990302 MS.gene47838:CDS 30.0%
ACACTTTGAATACATCAGAT+TGG + chr4.4:84989619-84989638 MS.gene47838:CDS 30.0%
ACTGTTAATGTGACTTTAAC+AGG + chr4.4:84990138-84990157 MS.gene47838:CDS 30.0%
AGAGAAAGTAATACTTCTTC+CGG + chr4.4:84987422-84987441 MS.gene47838:intron 30.0%
AGATGTAAGAATGATGTGTT+GGG + chr4.4:84987345-84987364 MS.gene47838:intron 30.0%
ATGTAAAAGGATACTTTGCA+TGG + chr4.4:84990940-84990959 MS.gene47838:CDS 30.0%
ATTGATGGAATTATTGATCC+AGG + chr4.4:84988951-84988970 MS.gene47838:intron 30.0%
CAAAATGGTATAATAGGCAT+TGG + chr4.4:84989714-84989733 MS.gene47838:CDS 30.0%
GATATATGCTTCAAGGAATT+TGG + chr4.4:84989552-84989571 MS.gene47838:CDS 30.0%
GGATAAATCAACTATGTTGT+TGG - chr4.4:84989380-84989399 None:intergenic 30.0%
GTATTCAAAGTGTAAGAGAA+TGG - chr4.4:84989612-84989631 None:intergenic 30.0%
GTTAGAGTTGTTAATGCATA+TGG - chr4.4:84988775-84988794 None:intergenic 30.0%
GTTCATTATGTCTCTAACAA+TGG - chr4.4:84987221-84987240 None:intergenic 30.0%
TAGAGACATAATGAACCATA+TGG + chr4.4:84987225-84987244 MS.gene47838:intron 30.0%
TATATATGTACCTGGTGTAT+GGG - chr4.4:84987659-84987678 None:intergenic 30.0%
TGATCACTATCATCGTTATA+AGG + chr4.4:84988404-84988423 MS.gene47838:CDS 30.0%
TGTAAAATATGATTCCTGCT+TGG - chr4.4:84988833-84988852 None:intergenic 30.0%
TGTAGACTGATTATAATTGG+GGG - chr4.4:84987969-84987988 None:intergenic 30.0%
TTTGCCAATCTTATAGCATT+AGG - chr4.4:84986759-84986778 None:intergenic 30.0%
! AAGAGGGTTCTAATAAAAAG+AGG - chr4.4:84985037-84985056 None:intergenic 30.0%
! CTTTAGAGAGAAAACTACAA+AGG + chr4.4:84989182-84989201 MS.gene47838:intron 30.0%
! TCTATAGTTGTTATTGCGAT+TGG - chr4.4:84985579-84985598 None:intergenic 30.0%
!! AGCAATCTAAGAGTCTTATT+GGG + chr4.4:84989998-84990017 MS.gene47838:CDS 30.0%
!! ATATGTGACCCTTTTTCATT+GGG + chr4.4:84988983-84989002 MS.gene47838:CDS 30.0%
!! GTGTTGATAATGTAGTATGA+AGG + chr4.4:84987586-84987605 MS.gene47838:intron 30.0%
!!! AATTTTGATTTCCTCGTAAG+AGG + chr4.4:84987112-84987131 MS.gene47838:intron 30.0%
!!! TGCTTATATTTTGAAACGGA+GGG - chr4.4:84986935-84986916 None:intergenic 30.0%
!!! TGCTTATATTTTGAAACGGA+TGG + chr4.4:84986916-84986935 MS.gene47838:intron 30.0%
!!! TTGCTTATATTTTGAAACGG+AGG - chr4.4:84986934-84986915 None:intergenic 30.0%
!!! TTGTTTCATTCTTGTTTTCG+GGG + chr4.4:84984936-84984955 MS.gene47838:CDS 30.0%
AAACCAATTCCTATACAGTC+TGG + chr4.4:84990078-84990097 MS.gene47838:CDS 35.0%
AAATCATGACCACACCTAAT+TGG + chr4.4:84987765-84987784 MS.gene47838:intron 35.0%
AACATATCATTCTTTCCGGA+AGG + chr4.4:84986979-84986998 MS.gene47838:intron 35.0%
ACAATGTTACAAAACGTACC+TGG - chr4.4:84986645-84986664 None:intergenic 35.0%
ACCATCCAAACATGAAATCA+AGG - chr4.4:84989806-84989825 None:intergenic 35.0%
ACCCAACATATCATTCTTTC+CGG + chr4.4:84986975-84986994 MS.gene47838:intron 35.0%
AGCTAGCAAAAAATTTGCAC+AGG - chr4.4:84986091-84986110 None:intergenic 35.0%
AGGCAATGAATCCTACAAAA+CGG - chr4.4:84985017-84985036 None:intergenic 35.0%
AGTTACAAAAAGCGAACAAG+AGG + chr4.4:84985100-84985119 MS.gene47838:intron 35.0%
ATCCATGGTTGTTGTAGAAA+CGG - chr4.4:84989847-84989866 None:intergenic 35.0%
ATTGGAGGTTAATCTGTCAA+CGG + chr4.4:84987553-84987572 MS.gene47838:intron 35.0%
CAACACTTGAAATAGCAGAA+AGG + chr4.4:84987140-84987159 MS.gene47838:intron 35.0%
CAATGAAAAAGGGTCACATA+TGG - chr4.4:84988984-84989003 None:intergenic 35.0%
CAGATGTAAGAATGATGTGT+TGG + chr4.4:84987344-84987363 MS.gene47838:intron 35.0%
CAGGCTCAAAATGGTATAAT+AGG + chr4.4:84989708-84989727 MS.gene47838:CDS 35.0%
CATACAGATTCTCCATATCT+TGG + chr4.4:84988675-84988694 MS.gene47838:CDS 35.0%
CCATCCAAACATGAAATCAA+GGG - chr4.4:84989805-84989824 None:intergenic 35.0%
CCATTCAAAGTTGTCCAAAA+GGG - chr4.4:84990967-84990986 None:intergenic 35.0%
CGAACAAGAGGATTTCTTTA+GGG + chr4.4:84985112-84985131 MS.gene47838:intron 35.0%
CTAAGGACATAATCACTTCA+GGG - chr4.4:84985341-84985360 None:intergenic 35.0%
CTAGTTAGTTAGTTGGTTAG+TGG - chr4.4:84989334-84989353 None:intergenic 35.0%
CTATTACTTGGCAATATCCT+TGG - chr4.4:84988701-84988720 None:intergenic 35.0%
GACAACTTTGAATGGAATGA+CGG + chr4.4:84990972-84990991 MS.gene47838:CDS 35.0%
GCATAAATAGAGGCAATAAC+AGG - chr4.4:84986553-84986572 None:intergenic 35.0%
GCATTTACTTACTCTCTCTT+TGG - chr4.4:84987251-84987270 None:intergenic 35.0%
GTACCAAAAACAAAACCTTC+CGG - chr4.4:84986607-84986626 None:intergenic 35.0%
GTATATATGTACCTGGTGTA+TGG - chr4.4:84987660-84987679 None:intergenic 35.0%
GTGGACAAAGTAACTAATCA+TGG + chr4.4:84984974-84984993 MS.gene47838:CDS 35.0%
TACAAAACGTACCTGGTAAT+TGG - chr4.4:84986638-84986657 None:intergenic 35.0%
TATGCAGAAGGAAAACTAAG+TGG + chr4.4:84988798-84988817 MS.gene47838:intron 35.0%
TCCATTCAAAGTTGTCCAAA+AGG - chr4.4:84990968-84990987 None:intergenic 35.0%
TCCGGAAAGAATGATATGTT+GGG - chr4.4:84986979-84986998 None:intergenic 35.0%
TCTATCTGTTTACATTGGAG+AGG + chr4.4:84985678-84985697 MS.gene47838:intron 35.0%
TGATGTATGCCATCTTCATT+AGG - chr4.4:84990186-84990205 None:intergenic 35.0%
TGGCTATATGTTTGTCCAAA+GGG + chr4.4:84990393-84990412 MS.gene47838:CDS 35.0%
TGTGTATGTTACTATGCATG+TGG + chr4.4:84986662-84986681 MS.gene47838:intron 35.0%
TTCATTAGGAGTGGTAAGAA+AGG - chr4.4:84990172-84990191 None:intergenic 35.0%
TTCCGGAAAGAATGATATGT+TGG - chr4.4:84986980-84986999 None:intergenic 35.0%
TTGGCTATATGTTTGTCCAA+AGG + chr4.4:84990392-84990411 MS.gene47838:CDS 35.0%
TTTCCTTTGTGTACAACAGT+AGG - chr4.4:84990428-84990447 None:intergenic 35.0%
! AAGGGCATAAAAGAAGGATT+TGG + chr4.4:84987159-84987178 MS.gene47838:intron 35.0%
! ATCAATGAGCTACTTGCTAA+TGG + chr4.4:84988861-84988880 MS.gene47838:CDS 35.0%
! CAGCAGCTTTTAGATCTAAT+GGG - chr4.4:84989776-84989795 None:intergenic 35.0%
! CATTCTGAACTCTTTTGCAA+AGG + chr4.4:84986332-84986351 MS.gene47838:intron 35.0%
! GAAACGGTCAAAAAGTATAG+TGG - chr4.4:84989831-84989850 None:intergenic 35.0%
! GAGCAATCTAAGAGTCTTAT+TGG + chr4.4:84989997-84990016 MS.gene47838:CDS 35.0%
! GTTTTCTTGTAGTGATTCAC+AGG - chr4.4:84987011-84987030 None:intergenic 35.0%
! TCAGCAGCTTTTAGATCTAA+TGG - chr4.4:84989777-84989796 None:intergenic 35.0%
! TTCGACAACTGAACTTGTTT+GGG - chr4.4:84985486-84985505 None:intergenic 35.0%
! TTTCGACAACTGAACTTGTT+TGG - chr4.4:84985487-84985506 None:intergenic 35.0%
!! AGATGATTTTAAGGACTTCG+TGG + chr4.4:84989530-84989549 MS.gene47838:CDS 35.0%
!! CAAAAACCTAGATAGTGGAT+CGG + chr4.4:84987727-84987746 MS.gene47838:intron 35.0%
!! CATATGTGACCCTTTTTCAT+TGG + chr4.4:84988982-84989001 MS.gene47838:CDS 35.0%
!!! CTGACAGTTTTGAGCTAAAT+CGG + chr4.4:84986572-84986591 MS.gene47838:CDS 35.0%
!!! GAAGGTTTTGTTTTTGGTAC+TGG + chr4.4:84986607-84986626 MS.gene47838:CDS 35.0%
!!! TTTCCGGAAGGTTTTGTTTT+TGG + chr4.4:84986601-84986620 MS.gene47838:CDS 35.0%
AAAACGTACCTGGTAATTGG+AGG - chr4.4:84986635-84986654 None:intergenic 40.0%
AAGAAACTTCCTAAACCACC+GGG - chr4.4:84991069-84991088 None:intergenic 40.0%
AAGAACTCCTCGATAGAATG+GGG - chr4.4:84986198-84986217 None:intergenic 40.0%
AAGTGAAGATGGAAGAGGAA+AGG + chr4.4:84987615-84987634 MS.gene47838:CDS 40.0%
AATTGGTGCAACTGCATACA+GGG + chr4.4:84988346-84988365 MS.gene47838:intron 40.0%
ACCACATATCAGGCTCAAAA+TGG + chr4.4:84989699-84989718 MS.gene47838:CDS 40.0%
ACCATGGATCACGACAAAAT+TGG + chr4.4:84989858-84989877 MS.gene47838:intron 40.0%
AGGCAAGGTGTGAATGTAAA+AGG + chr4.4:84990927-84990946 MS.gene47838:intron 40.0%
AGTGAAGATGGAAGAGGAAA+GGG + chr4.4:84987616-84987635 MS.gene47838:CDS 40.0%
ATACTCATCTTGTAAGGCCT+GGG - chr4.4:84989015-84989034 None:intergenic 40.0%
ATGGTTGTAGTGGTGTGATT+TGG + chr4.4:84987847-84987866 MS.gene47838:intron 40.0%
ATGTTTGTCCAAAGGGGATT+CGG + chr4.4:84990400-84990419 MS.gene47838:CDS 40.0%
ATTCACAGGACATATCCTTC+CGG - chr4.4:84986997-84987016 None:intergenic 40.0%
ATTCCTATACAGTCTGGATC+AGG + chr4.4:84990084-84990103 MS.gene47838:CDS 40.0%
CAAGAAACTTCCTAAACCAC+CGG - chr4.4:84991070-84991089 None:intergenic 40.0%
CAAGAACTCCTCGATAGAAT+GGG - chr4.4:84986199-84986218 None:intergenic 40.0%
CAATATCCTTGGCCAAGATA+TGG - chr4.4:84988690-84988709 None:intergenic 40.0%
CCATGGATCACGACAAAATT+GGG + chr4.4:84989859-84989878 MS.gene47838:intron 40.0%
CCCTTGATTTCATGTTTGGA+TGG + chr4.4:84989802-84989821 MS.gene47838:CDS 40.0%
CTAGCCAAAAACCTAGATAG+TGG + chr4.4:84987722-84987741 MS.gene47838:intron 40.0%
CTTACCACTCCTAATGAAGA+TGG + chr4.4:84990174-84990193 MS.gene47838:intron 40.0%
CTTCGTGGATATATGCTTCA+AGG + chr4.4:84989545-84989564 MS.gene47838:CDS 40.0%
GAATACATCAGATTGGTACC+AGG + chr4.4:84989626-84989645 MS.gene47838:CDS 40.0%
GATATATTTGCCCATACACC+AGG + chr4.4:84987646-84987665 MS.gene47838:CDS 40.0%
GATCCAGACTGTATAGGAAT+TGG - chr4.4:84990084-84990103 None:intergenic 40.0%
GCATTGGATTAAACTCTCAC+TGG + chr4.4:84989730-84989749 MS.gene47838:CDS 40.0%
GCGAACAAGAGGATTTCTTT+AGG + chr4.4:84985111-84985130 MS.gene47838:intron 40.0%
GCTAAGGACATAATCACTTC+AGG - chr4.4:84985342-84985361 None:intergenic 40.0%
GGATACTTTCCTGTTGTTAG+CGG - chr4.4:84989931-84989950 None:intergenic 40.0%
GGCTATATGTTTGTCCAAAG+GGG + chr4.4:84990394-84990413 MS.gene47838:CDS 40.0%
GGGAAGATCCCAATGAAAAA+GGG - chr4.4:84988994-84989013 None:intergenic 40.0%
GGGGTATGAGTAGTTGAATA+GGG - chr4.4:84987950-84987969 None:intergenic 40.0%
GTCACATATGGTATTTGACC+TGG - chr4.4:84988972-84988991 None:intergenic 40.0%
GTGGTTTATCATGGTTGTAG+TGG + chr4.4:84987837-84987856 MS.gene47838:intron 40.0%
GTTTGCATGGTGGTTTATCA+TGG + chr4.4:84987828-84987847 MS.gene47838:intron 40.0%
TAATTGGTGCAACTGCATAC+AGG + chr4.4:84988345-84988364 MS.gene47838:intron 40.0%
TAGCAAGTAGCTCATTGATC+AGG - chr4.4:84988860-84988879 None:intergenic 40.0%
TATGCCATCTTCATTAGGAG+TGG - chr4.4:84990181-84990200 None:intergenic 40.0%
TTACTCTCTCTTTGGCCATA+TGG - chr4.4:84987243-84987262 None:intergenic 40.0%
TTGGAGACAGAGTAAAGCAT+TGG + chr4.4:84989571-84989590 MS.gene47838:CDS 40.0%
TTTATACAGCCGCTAACAAC+AGG + chr4.4:84989919-84989938 MS.gene47838:CDS 40.0%
! ACCATTTTGAGCCTGATATG+TGG - chr4.4:84989703-84989722 None:intergenic 40.0%
! AGCAGAAAGGGCATAAAAGA+AGG + chr4.4:84987153-84987172 MS.gene47838:intron 40.0%
! AGGAATTGGTTTCGTTGCAT+TGG - chr4.4:84990070-84990089 None:intergenic 40.0%
! AGGTGTGGTCATGATTTGTA+AGG - chr4.4:84987762-84987781 None:intergenic 40.0%
! ATACTTTGCATGGTCCCTTT+TGG + chr4.4:84990950-84990969 MS.gene47838:CDS 40.0%
! CAACTATGTTGTTGGTTGGT+TGG - chr4.4:84989372-84989391 None:intergenic 40.0%
! CCCTTTTGGACAACTTTGAA+TGG + chr4.4:84990964-84990983 MS.gene47838:CDS 40.0%
! CGATCCACTATCTAGGTTTT+TGG - chr4.4:84987729-84987748 None:intergenic 40.0%
! GATTTCTTTAGGGACCGATT+TGG + chr4.4:84985122-84985141 MS.gene47838:intron 40.0%
! TATATTTGTTGGGGTAGCCA+AGG - chr4.4:84985399-84985418 None:intergenic 40.0%
! TCGACAACTGAACTTGTTTG+GGG - chr4.4:84985485-84985504 None:intergenic 40.0%
! TCTAATGGGTCAGTTGAGTA+TGG - chr4.4:84989762-84989781 None:intergenic 40.0%
! TGGAGACAGAGTAAAGCATT+GGG + chr4.4:84989572-84989591 MS.gene47838:CDS 40.0%
! TGTTCACGATACCGTTTTGT+AGG + chr4.4:84985003-84985022 MS.gene47838:intron 40.0%
! TTTGATTTCCTCGTAAGAGG+AGG + chr4.4:84987115-84987134 MS.gene47838:intron 40.0%
!! CTCTCTAAAGTGTGAGTGTA+TGG - chr4.4:84989172-84989191 None:intergenic 40.0%
!! TGGCCTTTTTAAGAGGGTTT+TGG + chr4.4:84985203-84985222 MS.gene47838:intron 40.0%
!!! TCATTCTTGTTTTCGGGGAA+AGG + chr4.4:84984941-84984960 MS.gene47838:CDS 40.0%
!!! TGGTTTTTTGTGTGAAGGCA+AGG + chr4.4:84990912-84990931 MS.gene47838:intron 40.0%
AACTCTAATGCCACTCCATG+TGG + chr4.4:84988287-84988306 MS.gene47838:intron 45.0%
AATATGTGCAGGCTGCAACT+TGG + chr4.4:84990373-84990392 MS.gene47838:intron 45.0%
ACATAAGACACCAAGCTTGC+TGG - chr4.4:84989952-84989971 None:intergenic 45.0%
ACCACCACTACCTACCAATT+AGG - chr4.4:84987782-84987801 None:intergenic 45.0%
ACTGCATACAGGGATGGTAA+AGG + chr4.4:84988356-84988375 MS.gene47838:intron 45.0%
AGGCTACCCCTTGTATATGA+AGG - chr4.4:84985379-84985398 None:intergenic 45.0%
ATGAGTGAATGGCAGACGAA+GGG + chr4.4:84985256-84985275 MS.gene47838:intron 45.0%
ATGGGACATACATTGGAGCA+TGG + chr4.4:84990290-84990309 MS.gene47838:CDS 45.0%
CACACCTAATTGGTAGGTAG+TGG + chr4.4:84987775-84987794 MS.gene47838:intron 45.0%
CACTACCTACCAATTAGGTG+TGG - chr4.4:84987777-84987796 None:intergenic 45.0%
CAGGCCTTACAAGATGAGTA+TGG + chr4.4:84989014-84989033 MS.gene47838:CDS 45.0%
CATACAGGGATGGTAAAGGA+TGG + chr4.4:84988360-84988379 MS.gene47838:intron 45.0%
CATACTCATCTTGTAAGGCC+TGG - chr4.4:84989016-84989035 None:intergenic 45.0%
CATGACCACACCTAATTGGT+AGG + chr4.4:84987769-84987788 MS.gene47838:intron 45.0%
CCAAGAACTCCTCGATAGAA+TGG - chr4.4:84986200-84986219 None:intergenic 45.0%
CCATTCACTCATAAGAGGAG+GGG - chr4.4:84985248-84985267 None:intergenic 45.0%
CCATTCTATCGAGGAGTTCT+TGG + chr4.4:84986197-84986216 MS.gene47838:intron 45.0%
CGTAGCCCTTCATATACAAG+GGG + chr4.4:84985370-84985389 MS.gene47838:intron 45.0%
GAAGAACATCAGGGTGAAAC+TGG - chr4.4:84985315-84985334 None:intergenic 45.0%
GACCGTTTCTACAACAACCA+TGG + chr4.4:84989842-84989861 MS.gene47838:intron 45.0%
GACGCCCTTGATTTCATGTT+TGG + chr4.4:84989798-84989817 MS.gene47838:CDS 45.0%
GATTCTCCATATCTTGGCCA+AGG + chr4.4:84988681-84988700 MS.gene47838:CDS 45.0%
GCAGAAGGAAAACTAAGTGG+CGG + chr4.4:84988801-84988820 MS.gene47838:intron 45.0%
GCCATTCACTCATAAGAGGA+GGG - chr4.4:84985249-84985268 None:intergenic 45.0%
GCCTCCATACTCATCTTGTA+AGG - chr4.4:84989021-84989040 None:intergenic 45.0%
GCCTTACAAGATGAGTATGG+AGG + chr4.4:84989017-84989036 MS.gene47838:CDS 45.0%
GCGTAGCCCTTCATATACAA+GGG + chr4.4:84985369-84985388 MS.gene47838:intron 45.0%
GCTGTAAGTGAAGATGGAAG+AGG + chr4.4:84987610-84987629 MS.gene47838:CDS 45.0%
GGACCTACTGTTGTACACAA+AGG + chr4.4:84990422-84990441 MS.gene47838:CDS 45.0%
GGCTACCCCTTGTATATGAA+GGG - chr4.4:84985378-84985397 None:intergenic 45.0%
GGGGAAGATCCCAATGAAAA+AGG - chr4.4:84988995-84989014 None:intergenic 45.0%
GTCTGCCATTCACTCATAAG+AGG - chr4.4:84985253-84985272 None:intergenic 45.0%
TACTCATCTTGTAAGGCCTG+GGG - chr4.4:84989014-84989033 None:intergenic 45.0%
TATGAGTGAATGGCAGACGA+AGG + chr4.4:84985255-84985274 MS.gene47838:intron 45.0%
TCAGGGTGAGAAGAACATCA+GGG - chr4.4:84985324-84985343 None:intergenic 45.0%
TCATATACAAGGGGTAGCCT+TGG + chr4.4:84985379-84985398 MS.gene47838:intron 45.0%
TCCTACACTATCACTCGAAG+AGG + chr4.4:84990722-84990741 MS.gene47838:CDS 45.0%
TCTATCGAGGAGTTCTTGGA+TGG + chr4.4:84986201-84986220 MS.gene47838:intron 45.0%
TGATTATGTCCTTAGCCCCA+GGG + chr4.4:84985346-84985365 MS.gene47838:intron 45.0%
TGCCATTCACTCATAAGAGG+AGG - chr4.4:84985250-84985269 None:intergenic 45.0%
TGGGACATACATTGGAGCAT+GGG + chr4.4:84990291-84990310 MS.gene47838:CDS 45.0%
TGTTTGTCCAAAGGGGATTC+GGG + chr4.4:84990401-84990420 MS.gene47838:CDS 45.0%
TTCAGGGTGAGAAGAACATC+AGG - chr4.4:84985325-84985344 None:intergenic 45.0%
! ACCTAATTGGTAGGTAGTGG+TGG + chr4.4:84987778-84987797 MS.gene47838:intron 45.0%
! AGCAAGAAGTTGGTTGTGTG+TGG - chr4.4:84989652-84989671 None:intergenic 45.0%
! ATGGAAGAGGAAAGGGTACA+TGG + chr4.4:84987623-84987642 MS.gene47838:CDS 45.0%
! CATGATTTGTAAGGCGCTTG+TGG - chr4.4:84987753-84987772 None:intergenic 45.0%
! CCCAATTTTGTCGTGATCCA+TGG - chr4.4:84989862-84989881 None:intergenic 45.0%
! GCAGTGAACGTTGGTAAATC+TGG - chr4.4:84989976-84989995 None:intergenic 45.0%
! GCTAAATCGGAGCAGTTTTC+CGG + chr4.4:84986585-84986604 MS.gene47838:CDS 45.0%
! GGGGGTATGAGTAGTTGAAT+AGG - chr4.4:84987951-84987970 None:intergenic 45.0%
! TGGAAGAGGAAAGGGTACAT+GGG + chr4.4:84987624-84987643 MS.gene47838:CDS 45.0%
! TTTTCATTGGGATCTTCCCC+AGG + chr4.4:84988995-84989014 MS.gene47838:CDS 45.0%
!! AATGGTGGTGTTGGTTTGCA+TGG + chr4.4:84987815-84987834 MS.gene47838:intron 45.0%
!! AGGAAAGTATCCAGCAAGCT+TGG + chr4.4:84989939-84989958 MS.gene47838:CDS 45.0%
!! GAAGGTGCTGTAAGTGAAGA+TGG + chr4.4:84987604-84987623 MS.gene47838:CDS 45.0%
!! TTGTTTTCGGGGAAAGGTCA+TGG + chr4.4:84984947-84984966 MS.gene47838:CDS 45.0%
!!! AAAATTATTTGATTTATTTA+AGG - chr4.4:84988500-84988519 None:intergenic 5.0%
AACACCACCATTGAACCACC+TGG - chr4.4:84987807-84987826 None:intergenic 50.0%
ACACCACCATTGAACCACCT+GGG - chr4.4:84987806-84987825 None:intergenic 50.0%
AGACGAAGGGAGTTTCTTGG+GGG + chr4.4:84985269-84985288 MS.gene47838:intron 50.0%
ATGCCACTCCATGTGGCTAA+TGG + chr4.4:84988294-84988313 MS.gene47838:intron 50.0%
CAGACGAAGGGAGTTTCTTG+GGG + chr4.4:84985268-84985287 MS.gene47838:intron 50.0%
CAGCTGCATGAGCAAGAAGT+TGG - chr4.4:84989662-84989681 None:intergenic 50.0%
CCCCTCCTCTTATGAGTGAA+TGG + chr4.4:84985245-84985264 MS.gene47838:intron 50.0%
CCTATACAGTCTGGATCAGG+CGG + chr4.4:84990087-84990106 MS.gene47838:CDS 50.0%
GATTATGTCCTTAGCCCCAG+GGG + chr4.4:84985347-84985366 MS.gene47838:intron 50.0%
GATTCCACCCATTAGCCACA+TGG - chr4.4:84988305-84988324 None:intergenic 50.0%
GATTGCTCTGCAGTGAACGT+TGG - chr4.4:84989985-84990004 None:intergenic 50.0%
GCAGACGAAGGGAGTTTCTT+GGG + chr4.4:84985267-84985286 MS.gene47838:intron 50.0%
GGCGTAGCCCTTCATATACA+AGG + chr4.4:84985368-84985387 MS.gene47838:intron 50.0%
GTGATTATGTCCTTAGCCCC+AGG + chr4.4:84985345-84985364 MS.gene47838:intron 50.0%
GTGTTGTACCTCCTCTTACG+AGG - chr4.4:84987126-84987145 None:intergenic 50.0%
TCACTCATAAGAGGAGGGGT+GGG - chr4.4:84985244-84985263 None:intergenic 50.0%
TCGACAACCCCATTCTATCG+AGG + chr4.4:84986188-84986207 MS.gene47838:intron 50.0%
TGAAACTGGACATCCCGACT+AGG - chr4.4:84985301-84985320 None:intergenic 50.0%
TGCCACTCCATGTGGCTAAT+GGG + chr4.4:84988295-84988314 MS.gene47838:intron 50.0%
TTCACTCATAAGAGGAGGGG+TGG - chr4.4:84985245-84985264 None:intergenic 50.0%
TTGTGGCCGATCCACTATCT+AGG - chr4.4:84987736-84987755 None:intergenic 50.0%
! AATCGGAGCAGTTTTCCGGA+AGG + chr4.4:84986589-84986608 MS.gene47838:CDS 50.0%
! AGGTGGTTCAATGGTGGTGT+TGG + chr4.4:84987806-84987825 MS.gene47838:intron 50.0%
! GACGGATACACTGTGCGTTT+TGG + chr4.4:84990990-84991009 MS.gene47838:CDS 50.0%
! GCCTCTTCGAGTGATAGTGT+AGG - chr4.4:84990726-84990745 None:intergenic 50.0%
! GTGTGATTTGGACAGTGTCG+TGG + chr4.4:84987859-84987878 MS.gene47838:intron 50.0%
! TGATTTGGACAGTGTCGTGG+TGG + chr4.4:84987862-84987881 MS.gene47838:intron 50.0%
! TGCATTGGCAGCATACATGC+TGG - chr4.4:84990055-84990074 None:intergenic 50.0%
!! TACTGGCTCCTCCAATTACC+AGG + chr4.4:84986624-84986643 MS.gene47838:CDS 50.0%
ACTCATAAGAGGAGGGGTGG+GGG - chr4.4:84985242-84985261 None:intergenic 55.0%
ACTGGACATCCCGACTAGGT+CGG - chr4.4:84985297-84985316 None:intergenic 55.0%
AGTAGGTCCCGAATCCCCTT+TGG - chr4.4:84990411-84990430 None:intergenic 55.0%
AGTGGCGGTGTAAACCAAGC+AGG + chr4.4:84988816-84988835 MS.gene47838:CDS 55.0%
ATATGAAGGGCTACGCCCCT+GGG - chr4.4:84985365-84985384 None:intergenic 55.0%
CACCCATTAGCCACATGGAG+TGG - chr4.4:84988300-84988319 None:intergenic 55.0%
CACTCATAAGAGGAGGGGTG+GGG - chr4.4:84985243-84985262 None:intergenic 55.0%
CACTCCATGTGGCTAATGGG+TGG + chr4.4:84988298-84988317 MS.gene47838:intron 55.0%
CCGCCTGATCCAGACTGTAT+AGG - chr4.4:84990090-84990109 None:intergenic 55.0%
GGCAGACGAAGGGAGTTTCT+TGG + chr4.4:84985266-84985285 MS.gene47838:intron 55.0%
GGGGAAAGGTCATGGTTGTG+TGG + chr4.4:84984955-84984974 MS.gene47838:CDS 55.0%
GGTGCAACTGCATACAGGGA+TGG + chr4.4:84988350-84988369 MS.gene47838:intron 55.0%
GTGGTTCCCAGGTGGTTCAA+TGG + chr4.4:84987797-84987816 MS.gene47838:intron 55.0%
GTTCCCAGGTGGTTCAATGG+TGG + chr4.4:84987800-84987819 MS.gene47838:intron 55.0%
TATATGAAGGGCTACGCCCC+TGG - chr4.4:84985366-84985385 None:intergenic 55.0%
! CAGTGTCGTGGTGGAAACTC+TGG + chr4.4:84987871-84987890 MS.gene47838:intron 55.0%
! GAAGTTGGTTGTGTGTGGCC+TGG - chr4.4:84989647-84989666 None:intergenic 55.0%
!! ATCACTCGAAGAGGCGCTCA+TGG + chr4.4:84990731-84990750 MS.gene47838:CDS 55.0%
!! GGTGGTGTTGGTTTGCATGG+TGG + chr4.4:84987818-84987837 MS.gene47838:intron 55.0%
AACCACCGGGCAGAGAGCTT+AGG - chr4.4:84991056-84991075 None:intergenic 60.0%
ACCACCGGGCAGAGAGCTTA+GGG - chr4.4:84991055-84991074 None:intergenic 60.0%
AGCTCTCTGCCCGGTGGTTT+AGG + chr4.4:84991057-84991076 MS.gene47838:CDS 60.0%
GACACCCTAAGCTCTCTGCC+CGG + chr4.4:84991048-84991067 MS.gene47838:CDS 60.0%
TATGAAGGGCTACGCCCCTG+GGG - chr4.4:84985364-84985383 None:intergenic 60.0%
! AGGTAGTGGTGGTTCCCAGG+TGG + chr4.4:84987789-84987808 MS.gene47838:intron 60.0%
! GGTAGGTAGTGGTGGTTCCC+AGG + chr4.4:84987786-84987805 MS.gene47838:intron 60.0%
ACCCTAAGCTCTCTGCCCGG+TGG + chr4.4:84991051-84991070 MS.gene47838:CDS 65.0%
CATAAGAGGAGGGGTGGGGG+TGG - chr4.4:84985239-84985258 None:intergenic 65.0%
! TCTGGATCAGGCGGCGCTGA+CGG + chr4.4:84990096-84990115 MS.gene47838:CDS 65.0%
!! CTTGGGGGTGCCGACCTAGT+CGG + chr4.4:84985284-84985303 MS.gene47838:intron 65.0%
!! TTGGGGGTGCCGACCTAGTC+GGG + chr4.4:84985285-84985304 MS.gene47838:intron 65.0%
GGGCTACGCCCCTGGGGCTA+AGG - chr4.4:84985358-84985377 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 84984923 84991112 84984923 ID=MS.gene47838
chr4.4 mRNA 84984923 84991112 84984923 ID=MS.gene47838.t1;Parent=MS.gene47838
chr4.4 exon 84984923 84984995 84984923 ID=MS.gene47838.t1.exon1;Parent=MS.gene47838.t1
chr4.4 CDS 84984923 84984995 84984923 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84986542 84986645 84986542 ID=MS.gene47838.t1.exon2;Parent=MS.gene47838.t1
chr4.4 CDS 84986542 84986645 84986542 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84987601 84987667 84987601 ID=MS.gene47838.t1.exon3;Parent=MS.gene47838.t1
chr4.4 CDS 84987601 84987667 84987601 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84988367 84988425 84988367 ID=MS.gene47838.t1.exon4;Parent=MS.gene47838.t1
chr4.4 CDS 84988367 84988425 84988367 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84988638 84988713 84988638 ID=MS.gene47838.t1.exon5;Parent=MS.gene47838.t1
chr4.4 CDS 84988638 84988713 84988638 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84988805 84988882 84988805 ID=MS.gene47838.t1.exon6;Parent=MS.gene47838.t1
chr4.4 CDS 84988805 84988882 84988805 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84988973 84989060 84988973 ID=MS.gene47838.t1.exon7;Parent=MS.gene47838.t1
chr4.4 CDS 84988973 84989060 84988973 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84989530 84989823 84989530 ID=MS.gene47838.t1.exon8;Parent=MS.gene47838.t1
chr4.4 CDS 84989530 84989823 84989530 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84989918 84990159 84989918 ID=MS.gene47838.t1.exon9;Parent=MS.gene47838.t1
chr4.4 CDS 84989918 84990159 84989918 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84990278 84990312 84990278 ID=MS.gene47838.t1.exon10;Parent=MS.gene47838.t1
chr4.4 CDS 84990278 84990312 84990278 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84990384 84990483 84990384 ID=MS.gene47838.t1.exon11;Parent=MS.gene47838.t1
chr4.4 CDS 84990384 84990483 84990384 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84990703 84990811 84990703 ID=MS.gene47838.t1.exon12;Parent=MS.gene47838.t1
chr4.4 CDS 84990703 84990811 84990703 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
chr4.4 exon 84990929 84991112 84990929 ID=MS.gene47838.t1.exon13;Parent=MS.gene47838.t1
chr4.4 CDS 84990929 84991112 84990929 ID=cds.MS.gene47838.t1;Parent=MS.gene47838.t1
Gene Sequence

>MS.gene47838

ATGGATGAATCTATTGTTTCATTCTTGTTTTCGGGGAAAGGTCATGGTTGTGTGGACAAAGTAACTAATCATGGTAACATTGTTCACGATACCGTTTTGTAGGATTCATTGCCTCTTTTTATTAGAACCCTCTTAAAAAGGCAAAAATAAAGAAAACAAAGAAAGGGGGAGAAAAAAAGTTACAAAAAGCGAACAAGAGGATTTCTTTAGGGACCGATTTGGATTATCAACTTGTTCATTTTCTGTAACTTTTTTCTCCCATTATTTGTTTTCTTTATTTTGGCCTTTTTAAGAGGGTTTTGGTTTGACACGTCCACCCCCACCCCTCCTCTTATGAGTGAATGGCAGACGAAGGGAGTTTCTTGGGGGTGCCGACCTAGTCGGGATGTCCAGTTTCACCCTGATGTTCTTCTCACCCTGAAGTGATTATGTCCTTAGCCCCAGGGGCGTAGCCCTTCATATACAAGGGGTAGCCTTGGCTACCCCAACAAATATATTAGTTTTGAATTAGTTGGTATGTATTCATATCTAGCTACATCAAATAATAAACATTGAGCTACCCCAAACAAGTTCAGTTGTCGAAAATTAGCATAAATAATAAAGTAAAAATTTACTACATGATTGATAGATTTAGTTGTAATTGTCTGGTATTTCCAATCGCAATAACAACTATAGAGAAAACTTTTTTAACAATTAAAATTATCAAGAAAATAGTCATAAACATATTAAATGAGCAATAAATCTCTTGCAAATAATCTATCTGTTTACATTGGAGAGGACATTATCATTTTATTTTGTAAACAATCAATTATAGATAAAATTGGCTTCTTGAAACATATTTTGTCCAACTTTTTAAAATAGTTATTGTCAATTTTTATCATTTGTTGATGCTCAAAGTTAATTTTTATGTATTAGCTAATTTTCATATTATTTTGTTTTTAATATCTACAACACTTGCGATTTTTAAGTTAATTTACTAAGATTTTGTTTAATTTTTGTTATAGAGATTAAATCCAAGAATAAAAACACTTTTTTATGTAAATTTAAAAAAATTGAGACAAAAATTGAATAAATTTTATTTAGAGGCTAAACCTAAAGAAGTATTTTATCCTTAAGTTTACTATGTTGGTTTTAAAATATTTTATTCTTTTATTTATAGTTGGCTCCTGTGCAAATTTTTTGCTAGCTTCGCTGCTACTTAGCCCAATTTTTTTTCTTCATTTAAATGGTTTCTATCCATTTCTTCCAATGTTCTATTTTTTCTTTCGACAACCCCATTCTATCGAGGAGTTCTTGGATGGAAAAAATTATGAGAGATGTCATTCTCATAAAAAAAAATACCTTGAAGGTTCATTTTCAAATTCTTCTCCATGTTCACTTATTACTAAGATGATTTTTTGCATCTTTTTCATTCTGAACTCTTTTGCAAAGGTTTTTAAAAGTTTCAAATGATTCATCGTTTTTTATTTTAAGAAAAGAACTCACGTGAATCTTAAAAAGTTATCAACATTGACAAAACCAAGAACAATAAAACTTAATTAAAAAATGACAATAATTTTTTTATTATTAACATTATAATTTCTTTTTTCTCTTAATAATTTCATTAATGTTTATTTTAGGGGCGGAACCTGTTATTGCCTCTATTTATGCTGACAGTTTTGAGCTAAATCGGAGCAGTTTTCCGGAAGGTTTTGTTTTTGGTACTGGCTCCTCCAATTACCAGGTACGTTTTGTAACATTGTGTATGTTACTATGCATGTGGAAATATGCATAGTCATTGCGTATGCTTTTGCTTTTTGTAACGGTCGTGCACCAAAAAAATTATGTTTAATTCCTAATGCTATAAGATTGGCAAAAGAAAAAACATGTACTCCCTCCGTTTCAAAATATAAGCAAAATTCACTTTTTAAGTCATTCATTTAATGATGTATATATATGGTTCATAATATGGACCACATACATCATTAAATGAATGAACCTAAAAAGTGAATTTTGCTTATATTTTGAAACGGATGGAGTATTACATAAAGAGAAATTCTTAGGTGAACTCTCACCCAACATATCATTCTTTCCGGAAGGATATGTCCTGTGAATCACTACAAGAAAACTTTTCAGTTTTTGCTTTGAATTTATTTTTTTCTCAATTGTTTACTTAAATTGATAAATAGACTCAAATTGTGAAATTGTTCAATTTTGATTTCCTCGTAAGAGGAGGTACAACACTTGAAATAGCAGAAAGGGCATAAAAGAAGGATTTGGACAAAAATTGTAAAACATAGTTCAATTTAAGTTTCACCATTGTTAGAGACATAATGAACCATATGGCCAAAGAGAGAGTAAGTAAATGCACCCAGTTTCAATTTCTTAAATAAAAATTATATATTCTTTTAGTTTAATGATATGTGTCATGTTTTAATTGGACAGATGTAAGAATGATGTGTTGGGTGAGAGTTCACACAAAAATTTCTCTAAAATAAATGCTTGAAAGTCCAGAAATTTAGAGAAAGTAATACTTCTTCCGGTCTAAAATATAAGAAAAGATTCATTTCACTGATTTATTGAATAAATGATGTATCTGATTTATATTATGGAGTATTGATTAGTATGAGTTATATTATTGAATCTTAAGAATTGGAGGTTAATCTGTCAACGGTATAATTTTTGTGTTGATAATGTAGTATGAAGGTGCTGTAAGTGAAGATGGAAGAGGAAAGGGTACATGGGATATATTTGCCCATACACCAGGTACATATATACATATATATATTTCTTCGATAATTATAGTTTTATTGATACTATCTAGCCAAAAACCTAGATAGTGGATCGGCCACAAGCGCCTTACAAATCATGACCACACCTAATTGGTAGGTAGTGGTGGTTCCCAGGTGGTTCAATGGTGGTGTTGGTTTGCATGGTGGTTTATCATGGTTGTAGTGGTGTGATTTGGACAGTGTCGTGGTGGAAACTCTGGACTCGTTCAGAGTTAAACCCAAGACCTTCAATTTTTTTTATCTATTTGGTCAACCCTATTCAACTACTCATACCCCCAATTATAATCAGTCTACATGAACAAGAAATGAGACTTTAATTTGTTACCAAACTTTCAGATGATTTATATGTTTTGATGAATGTAAATAAGTCTCAAGATATATAGACAAGTCATAGGACTTCATGTTTGTACAGTAAGATGTAAGACGTGCTTAACACACACAATTTCTACCGATAGTGTAAAAAAATATATTAATGACAACACAAGTTTTTGTACTAGAATTCTAATAGATTTTTTTTTTTGTTGTAGTTATTTCCTGTTAGATATTGAAGAAAAGAAACAGAAACAACGACAAATATATATAATTAATTTGATAACTCTAATGCCACTCCATGTGGCTAATGGGTGGAATCATATTTTTCTTCTAATGTGGTAATTGGTGCAACTGCATACAGGGATGGTAAAGGATGGAAAGAATGCAGATGTAGCTATTGATCACTATCATCGTTATAAGGTACCTCTAATGTGATATATAATTTCAGATTAATTGATACAAATTGTAATTGTAGATCAAATCATTTTAGTCCTTAAATAAATCAAATAATTTTAGTGATCAAAAGGTAATAATAGATTGACAATGTAAAAAAAGATGTATAGATTTTACTTTATGAATCTCTATTTTTTCTTCTTCTAGTATATGTGTTAACCATTTTTACATCTTAATAGGAAGATGTTCAAATCATGAAGAATATGAATACAGATGCATACAGATTCTCCATATCTTGGCCAAGGATATTGCCAAGTAATAGAAAATGTTTAATTTGGTTACATCATTAATGAGTTTCAACTAGTTGTATCTTCCATATGCATTAACAACTCTAACAAATATGCAGAAGGAAAACTAAGTGGCGGTGTAAACCAAGCAGGAATCATATTTTACAACAACCTGATCAATGAGCTACTTGCTAATGGTAATGCATTATATTCCATACTTTATTAGTATATCATATTCATGATGTTCATATTCATAATAATACAAATTGATGGAATTATTGATCCAGGTCAAATACCATATGTGACCCTTTTTCATTGGGATCTTCCCCAGGCCTTACAAGATGAGTATGGAGGCTTTGTCAGCACGAATATTTTGTAAGTATCATGACACAAATTTGATAGAAAATGCACATACAAAATTGAGAGAAAAATTAGAATGTTTTGGATACTTCAGAACGTTCTGTACTGCGATTAGAATGATTTCCATACACTCACACTTTAGAGAGAAAACTACAAAGGACGATGAAACTCTTCATTGTTAAATGTGATAGATATGAGAGATATGAGTGATATATATGTATGTGATATATCAACTGAATACAAAATAAGTACTTATATGCTAAATTGAGTTACTTGCTCTACAAGCCACTAACCAACTAACTAACTAGTTAGTTACTAACTAACCAACCAACCAACAACATAGTTGATTTATCCACAACTAACTAACATTAGAATATGAATTATACATCAACAAAATTTTCATTCAAGAAATAATAAATTGAGGATAGAGCATTATGACATTTTTTTTTATTCATATAGTTGATTGTTTAATTTCAATATGCAGAGATGATTTTAAGGACTTCGTGGATATATGCTTCAAGGAATTTGGAGACAGAGTAAAGCATTGGGTTACTTTTAATGAGCCATTCTCTTACACTTTGAATACATCAGATTGGTACCAGGCCACACACAACCAACTTCTTGCTCATGCAGCTGTTTTCGAATTGTATAAAACCACATATCAGGCTCAAAATGGTATAATAGGCATTGGATTAAACTCTCACTGGTTTAAACCATACTCAACTGACCCATTAGATCTAAAAGCTGCTGAAGACGCCCTTGATTTCATGTTTGGATGGTAACCACTATACTTTTTGACCGTTTCTACAACAACCATGGATCACGACAAAATTGGGACCGTATAATTTGAAATCTTTTTTATCTGTTTACAGGTTTATACAGCCGCTAACAACAGGAAAGTATCCAGCAAGCTTGGTGTCTTATGTGCCAGATTTACCAACGTTCACTGCAGAGCAATCTAAGAGTCTTATTGGGTCATATGATTTTATTGGAATCAATTACTACACCAGCATGTATGCTGCCAATGCAACGAAACCAATTCCTATACAGTCTGGATCAGGCGGCGCTGACGGTGTCAATAGTGTTTTCAATACTGTTAATGTGACTTTAACAGGTAAGAACACCTTTCTTACCACTCCTAATGAAGATGGCATACATCATTAATAGAAAAATCAATGTGTGCTATGATTCCTTGTTTGACATAAATTGTTTTCTGGTATGATTCATGACAGATAAGAATAAAGATGGGACATACATTGGAGCATGGGTGAGTAAGACTCTTGAGATTATTGTTACATCTTATTTGATTGATGAATAACAACTAAACAATATGTGCAGGCTGCAACTTGGCTATATGTTTGTCCAAAGGGGATTCGGGACCTACTGTTGTACACAAAGGAAAAGTATAACAATCCTACGATTATCATAACAGAAAATGGTAATATTTATAATACATTCTTTTATTTTTTTTATTTACTTCTAACATAAAATTTAAGAAAATATATTATGTATATATCAATCATTTTTTATATTAAATCTACTAATTGTCATTAAAAAAAGCAAATACTTCTAATATTCTCTCATAGTGTATTTCATTCTCCTTTTTTCAGTGTCTAATAAACTAAAATTTGAAAATTCTAATAAATTTAAATCATAGGTATGAATGAAGTCAATGATCCTACACTATCACTCGAAGAGGCGCTCATGGATACTAACAGAATTGATTACTTTTATCGTCATCTATATTATCTTTTATCTGCAATGAGGTAGCACCCTCTATTTACTTAAATCAGAATCAATTATATTATTTTCGCACTCTAATTTTTTTAGTTTTATGCATTTAATTTTAACTATATTGTTGTTTTTTGGTTTTTTGTGTGAAGGCAAGGTGTGAATGTAAAAGGATACTTTGCATGGTCCCTTTTGGACAACTTTGAATGGAATGACGGATACACTGTGCGTTTTGGAATTAACTTTGTTGATTATGACAATGAACTTAGAAGACACCCTAAGCTCTCTGCCCGGTGGTTTAGGAAGTTTCTTGAACATAATAGAATTATTGGTTGA
Protein sequence

>MS.gene47838.t1

MDESIVSFLFSGKGHGCVDKVTNHGAEPVIASIYADSFELNRSSFPEGFVFGTGSSNYQYEGAVSEDGRGKGTWDIFAHTPGMVKDGKNADVAIDHYHRYKEDVQIMKNMNTDAYRFSISWPRILPKGKLSGGVNQAGIIFYNNLINELLANGQIPYVTLFHWDLPQALQDEYGGFVSTNILDDFKDFVDICFKEFGDRVKHWVTFNEPFSYTLNTSDWYQATHNQLLAHAAVFELYKTTYQAQNGIIGIGLNSHWFKPYSTDPLDLKAAEDALDFMFGWFIQPLTTGKYPASLVSYVPDLPTFTAEQSKSLIGSYDFIGINYYTSMYAANATKPIPIQSGSGGADGVNSVFNTVNVTLTDKNKDGTYIGAWAATWLYVCPKGIRDLLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQGVNVKGYFAWSLLDNFEWNDGYTVRFGINFVDYDNELRRHPKLSARWFRKFLEHNRIIG