Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48336.t1 | RHN63467.1 | 96.1 | 594 | 23 | 0 | 4 | 597 | 137 | 730 | 0.00E+00 | 1139 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48336.t1 | Q8VY13 | 50.3 | 616 | 277 | 10 | 4 | 597 | 120 | 728 | 8.5e-169 | 595.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48336.t1 | A0A072UPM9 | 96.1 | 594 | 23 | 0 | 4 | 597 | 121 | 714 | 0.0e+00 | 1139.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051568 | MS.gene48336 | 0.819664 | 1.03E-52 | -1.69E-46 |
| MS.gene051588 | MS.gene48336 | 0.8049 | 1.73E-49 | -1.69E-46 |
| MS.gene053147 | MS.gene48336 | 0.80708 | 6.02E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene48336 | 0.805561 | 1.26E-49 | -1.69E-46 |
| MS.gene054581 | MS.gene48336 | 0.813557 | 2.41E-51 | -1.69E-46 |
| MS.gene057321 | MS.gene48336 | -0.832111 | 1.14E-55 | -1.69E-46 |
| MS.gene057887 | MS.gene48336 | 0.815098 | 1.10E-51 | -1.69E-46 |
| MS.gene058208 | MS.gene48336 | 0.838368 | 3.00E-57 | -1.69E-46 |
| MS.gene058209 | MS.gene48336 | 0.821912 | 3.14E-53 | -1.69E-46 |
| MS.gene05872 | MS.gene48336 | 0.825488 | 4.56E-54 | -1.69E-46 |
| MS.gene061233 | MS.gene48336 | 0.810959 | 8.89E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48336.t1 | MTR_4g105080 | 96.181 | 576 | 22 | 0 | 22 | 597 | 1 | 576 | 0.0 | 1143 |
| MS.gene48336.t1 | MTR_4g105080 | 96.128 | 594 | 23 | 0 | 4 | 597 | 121 | 714 | 0.0 | 1140 |
| MS.gene48336.t1 | MTR_1g100150 | 34.184 | 588 | 344 | 15 | 1 | 570 | 123 | 685 | 7.66e-105 | 332 |
| MS.gene48336.t1 | MTR_1g100130 | 32.590 | 583 | 360 | 14 | 1 | 570 | 17 | 579 | 6.01e-101 | 318 |
| MS.gene48336.t1 | MTR_1g100130 | 32.762 | 583 | 359 | 14 | 1 | 570 | 128 | 690 | 1.25e-99 | 318 |
| MS.gene48336.t1 | MTR_8g028780 | 33.054 | 596 | 344 | 13 | 1 | 572 | 122 | 686 | 6.58e-92 | 298 |
| MS.gene48336.t1 | MTR_8g028795 | 38.337 | 433 | 247 | 9 | 1 | 426 | 134 | 553 | 2.61e-89 | 291 |
| MS.gene48336.t1 | MTR_8g028780 | 32.103 | 623 | 345 | 15 | 1 | 572 | 122 | 717 | 1.84e-87 | 287 |
| MS.gene48336.t1 | MTR_2g028530 | 31.811 | 613 | 379 | 15 | 4 | 597 | 148 | 740 | 3.00e-83 | 276 |
| MS.gene48336.t1 | MTR_8g031070 | 41.946 | 298 | 163 | 6 | 91 | 385 | 186 | 476 | 1.36e-62 | 218 |
| MS.gene48336.t1 | MTR_4g109530 | 26.074 | 326 | 188 | 12 | 51 | 329 | 349 | 668 | 4.54e-24 | 107 |
| MS.gene48336.t1 | MTR_4g109530 | 26.074 | 326 | 188 | 12 | 51 | 329 | 334 | 653 | 4.79e-24 | 107 |
| MS.gene48336.t1 | MTR_8g099030 | 23.377 | 385 | 230 | 11 | 51 | 377 | 430 | 807 | 2.63e-20 | 95.9 |
| MS.gene48336.t1 | MTR_1g083290 | 26.016 | 246 | 139 | 6 | 124 | 329 | 476 | 718 | 5.58e-19 | 91.7 |
| MS.gene48336.t1 | MTR_3g098320 | 25.568 | 352 | 186 | 13 | 51 | 329 | 377 | 725 | 6.11e-19 | 91.7 |
| MS.gene48336.t1 | MTR_3g098320 | 25.568 | 352 | 186 | 13 | 51 | 329 | 386 | 734 | 6.60e-19 | 91.7 |
| MS.gene48336.t1 | MTR_3g098380 | 25.820 | 244 | 135 | 7 | 114 | 329 | 523 | 748 | 2.66e-18 | 89.7 |
| MS.gene48336.t1 | MTR_8g095520 | 26.540 | 211 | 124 | 6 | 147 | 329 | 520 | 727 | 1.18e-17 | 87.4 |
| MS.gene48336.t1 | MTR_7g113130 | 24.335 | 263 | 156 | 7 | 106 | 329 | 472 | 730 | 8.89e-17 | 84.7 |
| MS.gene48336.t1 | MTR_7g113130 | 24.335 | 263 | 156 | 7 | 106 | 329 | 472 | 730 | 9.83e-17 | 84.7 |
| MS.gene48336.t1 | MTR_3g098350 | 26.027 | 219 | 130 | 6 | 140 | 329 | 527 | 742 | 2.32e-16 | 83.6 |
| MS.gene48336.t1 | MTR_2g043900 | 25.513 | 341 | 192 | 15 | 51 | 333 | 420 | 756 | 3.05e-15 | 79.7 |
| MS.gene48336.t1 | MTR_2g043900 | 25.513 | 341 | 192 | 15 | 51 | 333 | 420 | 756 | 3.31e-15 | 79.7 |
| MS.gene48336.t1 | MTR_2g043900 | 25.513 | 341 | 192 | 15 | 51 | 333 | 420 | 756 | 3.84e-15 | 79.7 |
| MS.gene48336.t1 | MTR_7g060540 | 26.147 | 218 | 122 | 7 | 147 | 329 | 469 | 682 | 4.94e-12 | 69.3 |
| MS.gene48336.t1 | MTR_7g060540 | 25.909 | 220 | 122 | 7 | 147 | 329 | 249 | 464 | 1.48e-11 | 67.8 |
| MS.gene48336.t1 | MTR_7g060540 | 25.909 | 220 | 122 | 7 | 147 | 329 | 249 | 464 | 1.60e-11 | 67.4 |
| MS.gene48336.t1 | MTR_7g060540 | 25.909 | 220 | 122 | 7 | 147 | 329 | 469 | 684 | 1.66e-11 | 67.8 |
| MS.gene48336.t1 | MTR_3g098320 | 24.731 | 279 | 149 | 11 | 51 | 271 | 386 | 661 | 3.49e-11 | 66.6 |
| MS.gene48336.t1 | MTR_3g098320 | 24.731 | 279 | 149 | 11 | 51 | 271 | 386 | 661 | 3.70e-11 | 66.6 |
| MS.gene48336.t1 | MTR_3g098320 | 24.731 | 279 | 149 | 11 | 51 | 271 | 377 | 652 | 3.78e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48336.t1 | AT5G50160 | 50.571 | 613 | 272 | 12 | 8 | 597 | 124 | 728 | 0.0 | 613 |
| MS.gene48336.t1 | AT5G50160 | 48.294 | 557 | 257 | 12 | 64 | 597 | 1 | 549 | 0.0 | 522 |
| MS.gene48336.t1 | AT1G23020 | 37.209 | 559 | 293 | 13 | 30 | 571 | 157 | 674 | 1.90e-113 | 354 |
| MS.gene48336.t1 | AT1G23020 | 37.209 | 559 | 293 | 13 | 30 | 571 | 161 | 678 | 1.96e-113 | 354 |
| MS.gene48336.t1 | AT1G23020 | 37.209 | 559 | 293 | 13 | 30 | 571 | 160 | 677 | 2.14e-113 | 354 |
| MS.gene48336.t1 | AT1G23020 | 37.209 | 559 | 293 | 13 | 30 | 571 | 160 | 677 | 2.14e-113 | 354 |
| MS.gene48336.t1 | AT1G01590 | 36.248 | 549 | 323 | 10 | 30 | 571 | 160 | 688 | 2.28e-113 | 354 |
| MS.gene48336.t1 | AT1G23020 | 37.209 | 559 | 293 | 13 | 30 | 571 | 184 | 701 | 3.22e-113 | 354 |
| MS.gene48336.t1 | AT1G23020 | 37.209 | 559 | 293 | 13 | 30 | 571 | 183 | 700 | 3.97e-113 | 354 |
| MS.gene48336.t1 | AT1G23020 | 37.209 | 559 | 293 | 13 | 30 | 571 | 183 | 700 | 3.97e-113 | 354 |
| MS.gene48336.t1 | AT1G01580 | 33.052 | 593 | 355 | 15 | 1 | 572 | 139 | 710 | 1.49e-103 | 329 |
| MS.gene48336.t1 | AT1G01580 | 33.052 | 593 | 355 | 15 | 1 | 572 | 217 | 788 | 6.63e-103 | 330 |
| MS.gene48336.t1 | AT5G23980 | 33.447 | 586 | 350 | 15 | 6 | 572 | 120 | 684 | 8.91e-100 | 318 |
| MS.gene48336.t1 | AT5G23990 | 33.512 | 561 | 332 | 15 | 32 | 572 | 13 | 552 | 1.86e-97 | 308 |
| MS.gene48336.t1 | AT5G23990 | 34.164 | 562 | 329 | 16 | 31 | 572 | 144 | 684 | 5.73e-97 | 311 |
| MS.gene48336.t1 | AT5G23990 | 32.562 | 562 | 330 | 13 | 35 | 572 | 106 | 642 | 3.09e-94 | 303 |
| MS.gene48336.t1 | AT5G49740 | 30.274 | 621 | 391 | 12 | 1 | 597 | 145 | 747 | 3.96e-85 | 281 |
| MS.gene48336.t1 | AT5G49730 | 30.048 | 619 | 395 | 12 | 1 | 597 | 136 | 738 | 2.45e-83 | 276 |
| MS.gene48336.t1 | AT5G49740 | 30.728 | 563 | 352 | 11 | 1 | 539 | 145 | 693 | 7.78e-76 | 255 |
| MS.gene48336.t1 | AT5G49740 | 35.088 | 399 | 241 | 4 | 1 | 385 | 145 | 539 | 2.83e-75 | 250 |
| MS.gene48336.t1 | AT5G49730 | 34.848 | 396 | 246 | 4 | 1 | 385 | 136 | 530 | 1.74e-73 | 245 |
| MS.gene48336.t1 | AT4G25090 | 23.944 | 355 | 199 | 11 | 51 | 343 | 352 | 697 | 1.52e-21 | 99.8 |
| MS.gene48336.t1 | AT4G25090 | 23.944 | 355 | 199 | 11 | 51 | 343 | 340 | 685 | 1.58e-21 | 99.8 |
| MS.gene48336.t1 | AT5G51060 | 24.490 | 343 | 190 | 12 | 51 | 329 | 400 | 737 | 2.50e-21 | 99.4 |
| MS.gene48336.t1 | AT1G09090 | 26.394 | 269 | 155 | 7 | 108 | 336 | 426 | 691 | 6.31e-21 | 97.8 |
| MS.gene48336.t1 | AT5G47910 | 26.781 | 351 | 189 | 14 | 51 | 341 | 425 | 767 | 2.09e-20 | 96.3 |
| MS.gene48336.t1 | AT1G19230 | 29.630 | 216 | 123 | 6 | 140 | 329 | 536 | 748 | 5.52e-20 | 95.1 |
| MS.gene48336.t1 | AT1G19230 | 31.193 | 218 | 117 | 7 | 140 | 329 | 562 | 774 | 6.93e-20 | 94.7 |
| MS.gene48336.t1 | AT1G64060 | 27.103 | 214 | 129 | 6 | 140 | 329 | 558 | 768 | 9.59e-19 | 91.3 |
| MS.gene48336.t1 | AT5G07390 | 28.910 | 211 | 119 | 7 | 147 | 329 | 522 | 729 | 5.75e-17 | 85.5 |
| MS.gene48336.t1 | AT5G07390 | 28.910 | 211 | 119 | 7 | 147 | 329 | 490 | 697 | 7.14e-17 | 85.1 |
| MS.gene48336.t1 | AT4G11230 | 24.107 | 336 | 195 | 11 | 51 | 329 | 423 | 755 | 1.67e-15 | 80.9 |
| MS.gene48336.t1 | AT1G09090 | 27.128 | 188 | 110 | 5 | 108 | 271 | 426 | 610 | 2.90e-12 | 70.1 |
| MS.gene48336.t1 | AT3G45810 | 26.432 | 227 | 129 | 6 | 139 | 329 | 497 | 721 | 1.22e-11 | 68.2 |
Find 108 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACTTTCTTCTTCTAATT+TGG | 0.027502 | 8.3:-17564069 | None:intergenic |
| CGCCAGCACTTTGTTTGTTT+GGG | 0.192217 | 8.3:+17563573 | MS.gene48336:CDS |
| AAACTTTCTTCTTCTAATTT+GGG | 0.215669 | 8.3:-17564068 | None:intergenic |
| GTTTGGATGGCTGCTATTAC+TGG | 0.223975 | 8.3:+17565080 | MS.gene48336:CDS |
| GAAGAACATGAAGTTCATTT+TGG | 0.229533 | 8.3:+17565386 | MS.gene48336:CDS |
| GCCATCCAAACTGGACTTTC+AGG | 0.231763 | 8.3:-17565068 | None:intergenic |
| TCCATATGCTGCATAATAAT+TGG | 0.232641 | 8.3:-17565045 | None:intergenic |
| GGAGGCAGGCCTAACTTTAA+AGG | 0.237785 | 8.3:+17565407 | MS.gene48336:CDS |
| GCGCCAGCACTTTGTTTGTT+TGG | 0.246543 | 8.3:+17563572 | MS.gene48336:CDS |
| AACTCCATTTCTGAGCATTT+TGG | 0.264485 | 8.3:+17564773 | MS.gene48336:CDS |
| CCAAAGAAAAGACTCCTTCT+TGG | 0.273461 | 8.3:+17565183 | MS.gene48336:CDS |
| TTGGCTGTATTTCGTATATT+TGG | 0.274271 | 8.3:+17563475 | MS.gene48336:CDS |
| TTGATTTGAACAGATATATT+AGG | 0.280035 | 8.3:+17565504 | MS.gene48336:intron |
| ACAGCCAACCCTCTTAAAAT+TGG | 0.296428 | 8.3:-17563460 | None:intergenic |
| TAAACAAAGGTGCTGATAAA+AGG | 0.299046 | 8.3:+17564578 | MS.gene48336:CDS |
| CAGACATGACAGTGTGATTA+TGG | 0.308804 | 8.3:+17564731 | MS.gene48336:intron |
| TCCAATTATTATGCAGCATA+TGG | 0.312731 | 8.3:+17565044 | MS.gene48336:CDS |
| AATTTAGTACTTGGATCTTT+AGG | 0.315372 | 8.3:-17564295 | None:intergenic |
| GTCTGTGGAACGCCTTTCTT+AGG | 0.318947 | 8.3:-17565305 | None:intergenic |
| ATGGAATTACCTTTAAAGTT+AGG | 0.331214 | 8.3:-17565416 | None:intergenic |
| ACCTCACCTCACTTTGTATA+TGG | 0.331893 | 8.3:-17563606 | None:intergenic |
| TTCAAATATATAACACTTGT+AGG | 0.341605 | 8.3:-17564415 | None:intergenic |
| TTTCAGATGGAACTATAGTA+TGG | 0.345437 | 8.3:-17565145 | None:intergenic |
| TTTGTTAGCAGAAGCTTGTT+TGG | 0.351150 | 8.3:+17563423 | MS.gene48336:CDS |
| TGGATCTGATATTGGAGTTT+TGG | 0.352657 | 8.3:+17565548 | MS.gene48336:CDS |
| GAATCTGAGTGTTTGAAGTT+AGG | 0.378131 | 8.3:+17565621 | MS.gene48336:CDS |
| ACAGTTTGTCAAGGCTAAAA+AGG | 0.388275 | 8.3:-17564192 | None:intergenic |
| CATGATGTTCTCATCAGCTT+TGG | 0.389412 | 8.3:-17564491 | None:intergenic |
| ACAACTAAGCGTGGGAATTA+CGG | 0.389449 | 8.3:+17564968 | MS.gene48336:CDS |
| AATGAACTTCATGTTCTTCA+AGG | 0.391345 | 8.3:-17565382 | None:intergenic |
| GTAATAGCAGCCATCCAAAC+TGG | 0.395706 | 8.3:-17565077 | None:intergenic |
| CTTAGAATAGCAACAAGGTT+TGG | 0.405833 | 8.3:+17563400 | MS.gene48336:CDS |
| TGTACAAGTTGTATCCTTGA+TGG | 0.413043 | 8.3:-17564831 | None:intergenic |
| AATTAGCTCCACAGCTTCAC+AGG | 0.423110 | 8.3:-17564269 | None:intergenic |
| ACTGATTCCTTCATGCTCTC+AGG | 0.423606 | 8.3:-17565579 | None:intergenic |
| TGGGGATAAGCACTTCTATA+TGG | 0.435559 | 8.3:+17564153 | MS.gene48336:CDS |
| GATGGAGAAGGTTGAAGAAA+GGG | 0.435831 | 8.3:+17565279 | MS.gene48336:CDS |
| TTCTTAGTTTCAGCTGACCT+TGG | 0.437129 | 8.3:-17565356 | None:intergenic |
| GGGGAGATTACACTTGTTGC+CGG | 0.437985 | 8.3:+17564019 | MS.gene48336:CDS |
| ACAGGACGTATATACCTTGC+TGG | 0.440780 | 8.3:+17563998 | MS.gene48336:CDS |
| TCTGCCAAAATGCTCAGAAA+TGG | 0.441657 | 8.3:-17564777 | None:intergenic |
| AAAGACTCCTTCTTGGATAG+TGG | 0.442694 | 8.3:+17565190 | MS.gene48336:CDS |
| AGATGGAGAAGGTTGAAGAA+AGG | 0.445970 | 8.3:+17565278 | MS.gene48336:CDS |
| TTTAAATAGTCTAATGAAGC+AGG | 0.448724 | 8.3:-17564637 | None:intergenic |
| GAAGCGTGTGGATCTGATAT+TGG | 0.448770 | 8.3:+17565540 | MS.gene48336:CDS |
| AACTTGTACATGTCATTAAG+AGG | 0.459864 | 8.3:+17564844 | MS.gene48336:CDS |
| ATTATGGTTGCTGGAGGTAG+TGG | 0.462206 | 8.3:+17564747 | MS.gene48336:CDS |
| GACAGTGTGATTATGGTTGC+TGG | 0.463898 | 8.3:+17564738 | MS.gene48336:CDS |
| GGTATACCTGTTGCAATTGA+AGG | 0.469135 | 8.3:+17564604 | MS.gene48336:CDS |
| TATCATGTCATAAAGAGTAT+TGG | 0.480329 | 8.3:-17564545 | None:intergenic |
| GTTAAGTATCACACATGGAT+TGG | 0.480350 | 8.3:+17563517 | MS.gene48336:CDS |
| TAGTATGGTTGAAACAGATT+AGG | 0.480827 | 8.3:-17565130 | None:intergenic |
| ATGGACCTGAAAGTCCAGTT+TGG | 0.481479 | 8.3:+17565063 | MS.gene48336:CDS |
| TAGGGCCCTTCAATTGCAAC+AGG | 0.481704 | 8.3:-17564610 | None:intergenic |
| TCAGCTGACCTTGGATCAAA+GGG | 0.483472 | 8.3:-17565347 | None:intergenic |
| TTCAGCTGACCTTGGATCAA+AGG | 0.487298 | 8.3:-17565348 | None:intergenic |
| CAACTATATCTCATCTTCAA+TGG | 0.489902 | 8.3:+17564443 | MS.gene48336:CDS |
| TAGGAAAATAAGAAAAGTGA+TGG | 0.497785 | 8.3:-17565111 | None:intergenic |
| TGATTAAATGTCAAGGGTGG+TGG | 0.504355 | 8.3:+17564521 | MS.gene48336:CDS |
| GTTGCAATTGAAGGGCCCTA+TGG | 0.513882 | 8.3:+17564613 | MS.gene48336:CDS |
| CACTTCTATATGGTCTTCCC+AGG | 0.515363 | 8.3:+17564163 | MS.gene48336:CDS |
| CAGGACGTATATACCTTGCT+GGG | 0.524995 | 8.3:+17563999 | MS.gene48336:CDS |
| AAATTAAACCCTTTGATCCA+AGG | 0.534507 | 8.3:+17565339 | MS.gene48336:CDS |
| TCAAATATATAACACTTGTA+GGG | 0.536178 | 8.3:-17564414 | None:intergenic |
| GTCTAATGAAGCAGGTCCAT+AGG | 0.538097 | 8.3:-17564629 | None:intergenic |
| AACTTTCTTCTTCTAATTTG+GGG | 0.542459 | 8.3:-17564067 | None:intergenic |
| ATGAACTTCATGTTCTTCAA+GGG | 0.543742 | 8.3:-17565381 | None:intergenic |
| TGATAGCAATTGTGTTGAGA+TGG | 0.546274 | 8.3:+17565261 | MS.gene48336:CDS |
| ACCCCAAACAAACAAAGTGC+TGG | 0.548647 | 8.3:-17563575 | None:intergenic |
| ATTTGGAAGTGGCAAAAGAC+AGG | 0.548862 | 8.3:+17563980 | MS.gene48336:CDS |
| TCTAATGAAGCAGGTCCATA+GGG | 0.551514 | 8.3:-17564628 | None:intergenic |
| AATTCTAGCTGAAACCATGC+AGG | 0.558194 | 8.3:-17564242 | None:intergenic |
| CGTTCCACAGACATCGCAGA+TGG | 0.560042 | 8.3:+17565316 | MS.gene48336:CDS |
| AGTAGATCCACTATCCAAGA+AGG | 0.560330 | 8.3:-17565197 | None:intergenic |
| TTGTTAAACAGATTTGGAAG+TGG | 0.560851 | 8.3:+17563969 | MS.gene48336:intron |
| CATTGAAGATGAGATATAGT+TGG | 0.565837 | 8.3:-17564442 | None:intergenic |
| TCACCTCACTTTGTATATGG+TGG | 0.573024 | 8.3:-17563603 | None:intergenic |
| ATTTCCATCTGCGATGTCTG+TGG | 0.573154 | 8.3:-17565320 | None:intergenic |
| AAGAAAGGGATTCCTAAGAA+AGG | 0.575794 | 8.3:+17565293 | MS.gene48336:CDS |
| TCTTCTAATTTGGGGAAGTG+AGG | 0.582585 | 8.3:-17564059 | None:intergenic |
| GCCAGCACTTTGTTTGTTTG+GGG | 0.590787 | 8.3:+17563574 | MS.gene48336:CDS |
| TGGATGGCTGCTATTACTGG+AGG | 0.596455 | 8.3:+17565083 | MS.gene48336:CDS |
| GTATACCTGTTGCAATTGAA+GGG | 0.597798 | 8.3:+17564605 | MS.gene48336:CDS |
| AGAGAGTGAAGAGTGAAGCA+TGG | 0.598825 | 8.3:-17565660 | None:intergenic |
| ACAAGAAACACAACTAAGCG+TGG | 0.598890 | 8.3:+17564959 | MS.gene48336:CDS |
| ATTAGCTCCACAGCTTCACA+GGG | 0.603545 | 8.3:-17564268 | None:intergenic |
| ACCTGAAAGTCCAGTTTGGA+TGG | 0.603632 | 8.3:+17565067 | MS.gene48336:CDS |
| ACTTGTACATGTCATTAAGA+GGG | 0.611165 | 8.3:+17564845 | MS.gene48336:CDS |
| GGTAACGAAGATAACAAGGC+CGG | 0.617903 | 8.3:-17564038 | None:intergenic |
| AAAGGTGCTGATAAAAGGAA+AGG | 0.621349 | 8.3:+17564583 | MS.gene48336:CDS |
| CTTCAGTTAAGTATCACACA+TGG | 0.622062 | 8.3:+17563512 | MS.gene48336:CDS |
| TTATACGCAACAGTTTGTCA+AGG | 0.631011 | 8.3:-17564201 | None:intergenic |
| GTGAGGTAACGAAGATAACA+AGG | 0.631966 | 8.3:-17564042 | None:intergenic |
| CAAGAAACACAACTAAGCGT+GGG | 0.635628 | 8.3:+17564960 | MS.gene48336:CDS |
| CTGTGATGATTAAATGTCAA+GGG | 0.637969 | 8.3:+17564515 | MS.gene48336:CDS |
| CAGCCACCATATACAAAGTG+AGG | 0.647610 | 8.3:+17563600 | MS.gene48336:CDS |
| CAAGTGTAATCTCCCCAGCA+AGG | 0.650642 | 8.3:-17564012 | None:intergenic |
| TGAGAGCATGAAGGAATCAG+TGG | 0.658286 | 8.3:+17565581 | MS.gene48336:CDS |
| ATACAAACTGAATTAAACAA+AGG | 0.659472 | 8.3:+17564565 | MS.gene48336:CDS |
| TCTGTGATGATTAAATGTCA+AGG | 0.676323 | 8.3:+17564514 | MS.gene48336:CDS |
| TTGTGGTCCTGAGAGCATGA+AGG | 0.688445 | 8.3:+17565572 | MS.gene48336:CDS |
| AAATTCAAGAATGAAGCGTG+TGG | 0.689017 | 8.3:+17565528 | MS.gene48336:CDS |
| CAATTGTGTTGAGATGGAGA+AGG | 0.701994 | 8.3:+17565267 | MS.gene48336:CDS |
| AGTTTCTTAGAATAGCAACA+AGG | 0.702556 | 8.3:+17563395 | MS.gene48336:CDS |
| AGGACGTATATACCTTGCTG+GGG | 0.713855 | 8.3:+17564000 | MS.gene48336:CDS |
| AGTGTGATTATGGTTGCTGG+AGG | 0.744527 | 8.3:+17564741 | MS.gene48336:CDS |
| TGATGATTAAATGTCAAGGG+TGG | 0.754801 | 8.3:+17564518 | MS.gene48336:CDS |
| TTAGCTCCACAGCTTCACAG+GGG | 0.790665 | 8.3:-17564267 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTTAATTACTTGAA+TGG | + | chr8.3:17563037-17563056 | MS.gene48336:intron | 10.0% |
| !! | AAATTAATATTCCATTCAAA+CGG | + | chr8.3:17564357-17564376 | MS.gene48336:intron | 15.0% |
| !! | TAAAAATAACTAAAGAAACA+TGG | - | chr8.3:17563852-17563871 | None:intergenic | 15.0% |
| !!! | TATATATTTTTAGAAATGCA+AGG | - | chr8.3:17565451-17565470 | None:intergenic | 15.0% |
| !!! | TTTTATAAGATAAATGAGAA+TGG | + | chr8.3:17564692-17564711 | MS.gene48336:intron | 15.0% |
| !! | AAACTTTCTTCTTCTAATTT+GGG | - | chr8.3:17564071-17564090 | None:intergenic | 20.0% |
| !! | ACAAAAATAAATTTCCATCA+AGG | + | chr8.3:17564817-17564836 | MS.gene48336:CDS | 20.0% |
| !! | ATACAAACTGAATTAAACAA+AGG | + | chr8.3:17564565-17564584 | MS.gene48336:CDS | 20.0% |
| !! | ATTATAGCAATAGCAATTAT+TGG | - | chr8.3:17562944-17562963 | None:intergenic | 20.0% |
| !! | TCAAATATATAACACTTGTA+GGG | - | chr8.3:17564417-17564436 | None:intergenic | 20.0% |
| !! | TTCAAATATATAACACTTGT+AGG | - | chr8.3:17564418-17564437 | None:intergenic | 20.0% |
| !!! | ATAATTGCTATTGCTATAAT+TGG | + | chr8.3:17562944-17562963 | MS.gene48336:intron | 20.0% |
| !!! | TCATATTTGTTAAACAGATT+TGG | + | chr8.3:17563963-17563982 | MS.gene48336:intron | 20.0% |
| !!! | TGATGGAAATTTATTTTTGT+TGG | - | chr8.3:17564817-17564836 | None:intergenic | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+AGG | - | chr8.3:17563637-17563656 | None:intergenic | 20.0% |
| !!! | TTGATTTGAACAGATATATT+AGG | + | chr8.3:17565504-17565523 | MS.gene48336:intron | 20.0% |
| !!! | TTTTCTTTTTATAGTCTTCT+TGG | + | chr8.3:17563199-17563218 | MS.gene48336:intron | 20.0% |
| ! | AAAATTATAAACTGCAGAAG+TGG | + | chr8.3:17563086-17563105 | MS.gene48336:intron | 25.0% |
| ! | AACTTTCTTCTTCTAATTTG+GGG | - | chr8.3:17564070-17564089 | None:intergenic | 25.0% |
| ! | AATTTAGTACTTGGATCTTT+AGG | - | chr8.3:17564298-17564317 | None:intergenic | 25.0% |
| ! | ATAACTAAAGAAACATGGTT+AGG | - | chr8.3:17563847-17563866 | None:intergenic | 25.0% |
| ! | CAAACTTTCTTCTTCTAATT+TGG | - | chr8.3:17564072-17564091 | None:intergenic | 25.0% |
| ! | CATCATAATTTACTTTCAGA+TGG | + | chr8.3:17563365-17563384 | MS.gene48336:intron | 25.0% |
| ! | CTGTACATAAATTTAGTACT+TGG | - | chr8.3:17564307-17564326 | None:intergenic | 25.0% |
| ! | GATTTAGACATACTTTAAGT+TGG | + | chr8.3:17563308-17563327 | MS.gene48336:intron | 25.0% |
| ! | TAACTAAAGAAACATGGTTA+GGG | - | chr8.3:17563846-17563865 | None:intergenic | 25.0% |
| ! | TAGGAAAATAAGAAAAGTGA+TGG | - | chr8.3:17565114-17565133 | None:intergenic | 25.0% |
| ! | TCAAATAAGTTAATACGAAC+TGG | + | chr8.3:17563820-17563839 | MS.gene48336:intron | 25.0% |
| ! | TTTAAATAGTCTAATGAAGC+AGG | - | chr8.3:17564640-17564659 | None:intergenic | 25.0% |
| !! | AATGAAATTTTTCGCTTGAT+CGG | - | chr8.3:17564917-17564936 | None:intergenic | 25.0% |
| !! | CTTCTGCAGTTTATAATTTT+AGG | - | chr8.3:17563086-17563105 | None:intergenic | 25.0% |
| !! | TATAATTGGACTTCTTTTCT+TGG | + | chr8.3:17562958-17562977 | MS.gene48336:intron | 25.0% |
| !! | TATCATGTCATAAAGAGTAT+TGG | - | chr8.3:17564548-17564567 | None:intergenic | 25.0% |
| !! | TATTTTTCATGTTTCATGCT+GGG | + | chr8.3:17564134-17564153 | MS.gene48336:CDS | 25.0% |
| !!! | ATGGAATTACCTTTAAAGTT+AGG | - | chr8.3:17565419-17565438 | None:intergenic | 25.0% |
| !!! | CATCAACTTTTTGAAATCAT+TGG | - | chr8.3:17563249-17563268 | None:intergenic | 25.0% |
| !!! | TTCTTCTTCCAATTTTAAGA+GGG | + | chr8.3:17563452-17563471 | MS.gene48336:CDS | 25.0% |
| AAATTAAACCCTTTGATCCA+AGG | + | chr8.3:17565339-17565358 | MS.gene48336:CDS | 30.0% | |
| AACTACCAGTATTTCAAAAC+TGG | - | chr8.3:17563180-17563199 | None:intergenic | 30.0% | |
| AACTTGTACATGTCATTAAG+AGG | + | chr8.3:17564844-17564863 | MS.gene48336:CDS | 30.0% | |
| AATGAACTTCATGTTCTTCA+AGG | - | chr8.3:17565385-17565404 | None:intergenic | 30.0% | |
| ACTTGTACATGTCATTAAGA+GGG | + | chr8.3:17564845-17564864 | MS.gene48336:CDS | 30.0% | |
| AGTTTCTTAGAATAGCAACA+AGG | + | chr8.3:17563395-17563414 | MS.gene48336:CDS | 30.0% | |
| ATAAGCTGTTAATCTCTTCA+GGG | - | chr8.3:17563780-17563799 | None:intergenic | 30.0% | |
| ATGAACTTCATGTTCTTCAA+GGG | - | chr8.3:17565384-17565403 | None:intergenic | 30.0% | |
| ATTGAACATGTAAGTGTTTC+TGG | + | chr8.3:17563286-17563305 | MS.gene48336:intron | 30.0% | |
| CAACTATATCTCATCTTCAA+TGG | + | chr8.3:17564443-17564462 | MS.gene48336:CDS | 30.0% | |
| CATTGAAGATGAGATATAGT+TGG | - | chr8.3:17564445-17564464 | None:intergenic | 30.0% | |
| CTGTGATGATTAAATGTCAA+GGG | + | chr8.3:17564515-17564534 | MS.gene48336:CDS | 30.0% | |
| GAAAGTAAAAACACTGCAAT+TGG | + | chr8.3:17565010-17565029 | MS.gene48336:CDS | 30.0% | |
| TAGTATGGTTGAAACAGATT+AGG | - | chr8.3:17565133-17565152 | None:intergenic | 30.0% | |
| TCCAATTATTATGCAGCATA+TGG | + | chr8.3:17565044-17565063 | MS.gene48336:CDS | 30.0% | |
| TCCATATGCTGCATAATAAT+TGG | - | chr8.3:17565048-17565067 | None:intergenic | 30.0% | |
| TCTGTGATGATTAAATGTCA+AGG | + | chr8.3:17564514-17564533 | MS.gene48336:CDS | 30.0% | |
| TTGGCTGTATTTCGTATATT+TGG | + | chr8.3:17563475-17563494 | MS.gene48336:CDS | 30.0% | |
| TTGTTAAACAGATTTGGAAG+TGG | + | chr8.3:17563969-17563988 | MS.gene48336:intron | 30.0% | |
| TTTCAGATGGAACTATAGTA+TGG | - | chr8.3:17565148-17565167 | None:intergenic | 30.0% | |
| ! | AGTCTTTTCTTTGGACAATT+TGG | - | chr8.3:17565177-17565196 | None:intergenic | 30.0% |
| ! | ATACTTTTCGCTACAATACA+TGG | + | chr8.3:17563550-17563569 | MS.gene48336:CDS | 30.0% |
| ! | ATTTTTCATGTTTCATGCTG+GGG | + | chr8.3:17564135-17564154 | MS.gene48336:CDS | 30.0% |
| ! | CTTCTTCTTCCAATTTTAAG+AGG | + | chr8.3:17563451-17563470 | MS.gene48336:CDS | 30.0% |
| ! | GAAGAACATGAAGTTCATTT+TGG | + | chr8.3:17565386-17565405 | MS.gene48336:CDS | 30.0% |
| ! | GTATTTTTCATGTTTCATGC+TGG | + | chr8.3:17564133-17564152 | MS.gene48336:CDS | 30.0% |
| ! | TGTATTTTCGATCATTTGCA+GGG | + | chr8.3:17564380-17564399 | MS.gene48336:intron | 30.0% |
| ! | TTTTTATAGTCTTCTTGGCA+TGG | + | chr8.3:17563204-17563223 | MS.gene48336:intron | 30.0% |
| !! | AATTTGGAATGCTTTTCAGA+TGG | - | chr8.3:17565161-17565180 | None:intergenic | 30.0% |
| !! | CATACTTTAAGTTGGATGAT+AGG | + | chr8.3:17563316-17563335 | MS.gene48336:intron | 30.0% |
| !! | TAAACAAAGGTGCTGATAAA+AGG | + | chr8.3:17564578-17564597 | MS.gene48336:CDS | 30.0% |
| AAAGCTGGATATCAAAGAAG+CGG | + | chr8.3:17562986-17563005 | MS.gene48336:intron | 35.0% | |
| AAATGCAAGGAAAGAGACAA+TGG | - | chr8.3:17565438-17565457 | None:intergenic | 35.0% | |
| AAATTCAAGAATGAAGCGTG+TGG | + | chr8.3:17565528-17565547 | MS.gene48336:CDS | 35.0% | |
| AAGAAAGGGATTCCTAAGAA+AGG | + | chr8.3:17565293-17565312 | MS.gene48336:CDS | 35.0% | |
| ACAGTTTGTCAAGGCTAAAA+AGG | - | chr8.3:17564195-17564214 | None:intergenic | 35.0% | |
| CATAAGCTGTTAATCTCTTC+AGG | - | chr8.3:17563781-17563800 | None:intergenic | 35.0% | |
| CCAGTATTTCAAAACTGGAT+AGG | - | chr8.3:17563175-17563194 | None:intergenic | 35.0% | |
| CTAAATAGTAAGTCTTCTGC+AGG | + | chr8.3:17562893-17562912 | MS.gene48336:intron | 35.0% | |
| CTTAGAATAGCAACAAGGTT+TGG | + | chr8.3:17563400-17563419 | MS.gene48336:CDS | 35.0% | |
| CTTCAGTTAAGTATCACACA+TGG | + | chr8.3:17563512-17563531 | MS.gene48336:CDS | 35.0% | |
| GTATACCTGTTGCAATTGAA+GGG | + | chr8.3:17564605-17564624 | MS.gene48336:CDS | 35.0% | |
| GTTAAGTATCACACATGGAT+TGG | + | chr8.3:17563517-17563536 | MS.gene48336:CDS | 35.0% | |
| TCGAAAATACACCGTTTGAA+TGG | - | chr8.3:17564371-17564390 | None:intergenic | 35.0% | |
| TGATAGCAATTGTGTTGAGA+TGG | + | chr8.3:17565261-17565280 | MS.gene48336:CDS | 35.0% | |
| TGATGATTAAATGTCAAGGG+TGG | + | chr8.3:17564518-17564537 | MS.gene48336:CDS | 35.0% | |
| TGTACAAGTTGTATCCTTGA+TGG | - | chr8.3:17564834-17564853 | None:intergenic | 35.0% | |
| TTATAAACTGCAGAAGTGGA+AGG | + | chr8.3:17563090-17563109 | MS.gene48336:intron | 35.0% | |
| TTATACGCAACAGTTTGTCA+AGG | - | chr8.3:17564204-17564223 | None:intergenic | 35.0% | |
| ! | AACTCCATTTCTGAGCATTT+TGG | + | chr8.3:17564773-17564792 | MS.gene48336:CDS | 35.0% |
| ! | GAACATGAAGTTCATTTTGG+AGG | + | chr8.3:17565389-17565408 | MS.gene48336:CDS | 35.0% |
| ! | GAATCTGAGTGTTTGAAGTT+AGG | + | chr8.3:17565621-17565640 | MS.gene48336:CDS | 35.0% |
| ! | GTGTATTTTCGATCATTTGC+AGG | + | chr8.3:17564379-17564398 | MS.gene48336:intron | 35.0% |
| ! | TGGATCTGATATTGGAGTTT+TGG | + | chr8.3:17565548-17565567 | MS.gene48336:CDS | 35.0% |
| ! | TTTGTTAGCAGAAGCTTGTT+TGG | + | chr8.3:17563423-17563442 | MS.gene48336:CDS | 35.0% |
| !! | AAAGGTGCTGATAAAAGGAA+AGG | + | chr8.3:17564583-17564602 | MS.gene48336:CDS | 35.0% |
| !! | TCTTCCAATTTTAAGAGGGT+TGG | + | chr8.3:17563456-17563475 | MS.gene48336:CDS | 35.0% |
| !!! | CCTATCCAGTTTTGAAATAC+TGG | + | chr8.3:17563172-17563191 | MS.gene48336:intron | 35.0% |
| !!! | GATATTGGAGTTTTGGTTTG+TGG | + | chr8.3:17565555-17565574 | MS.gene48336:CDS | 35.0% |
| AAAGACTCCTTCTTGGATAG+TGG | + | chr8.3:17565190-17565209 | MS.gene48336:CDS | 40.0% | |
| AAGCTGGATATCAAAGAAGC+GGG | + | chr8.3:17562987-17563006 | MS.gene48336:intron | 40.0% | |
| ACAACTAAGCGTGGGAATTA+CGG | + | chr8.3:17564968-17564987 | MS.gene48336:CDS | 40.0% | |
| ACAAGAAACACAACTAAGCG+TGG | + | chr8.3:17564959-17564978 | MS.gene48336:CDS | 40.0% | |
| ACAGCCAACCCTCTTAAAAT+TGG | - | chr8.3:17563463-17563482 | None:intergenic | 40.0% | |
| ACCATATACAAAGTGAGGTG+AGG | + | chr8.3:17563605-17563624 | MS.gene48336:intron | 40.0% | |
| ACCTCACCTCACTTTGTATA+TGG | - | chr8.3:17563609-17563628 | None:intergenic | 40.0% | |
| AGATGGAGAAGGTTGAAGAA+AGG | + | chr8.3:17565278-17565297 | MS.gene48336:CDS | 40.0% | |
| AGTAGATCCACTATCCAAGA+AGG | - | chr8.3:17565200-17565219 | None:intergenic | 40.0% | |
| ATCAAGTCCAAAAACCTGCA+TGG | + | chr8.3:17564228-17564247 | MS.gene48336:CDS | 40.0% | |
| ATTTGGAAGTGGCAAAAGAC+AGG | + | chr8.3:17563980-17563999 | MS.gene48336:CDS | 40.0% | |
| CAAGAAACACAACTAAGCGT+GGG | + | chr8.3:17564960-17564979 | MS.gene48336:CDS | 40.0% | |
| CAATTGTGTTGAGATGGAGA+AGG | + | chr8.3:17565267-17565286 | MS.gene48336:CDS | 40.0% | |
| CAGACATGACAGTGTGATTA+TGG | + | chr8.3:17564731-17564750 | MS.gene48336:intron | 40.0% | |
| CATGATGTTCTCATCAGCTT+TGG | - | chr8.3:17564494-17564513 | None:intergenic | 40.0% | |
| CCAAAGAAAAGACTCCTTCT+TGG | + | chr8.3:17565183-17565202 | MS.gene48336:CDS | 40.0% | |
| GATGGAGAAGGTTGAAGAAA+GGG | + | chr8.3:17565279-17565298 | MS.gene48336:CDS | 40.0% | |
| GGTATACCTGTTGCAATTGA+AGG | + | chr8.3:17564604-17564623 | MS.gene48336:CDS | 40.0% | |
| GGTGAGGTCTATTCCTTATT+TGG | + | chr8.3:17563621-17563640 | MS.gene48336:intron | 40.0% | |
| GTGAGGTAACGAAGATAACA+AGG | - | chr8.3:17564045-17564064 | None:intergenic | 40.0% | |
| TCACCTCACTTTGTATATGG+TGG | - | chr8.3:17563606-17563625 | None:intergenic | 40.0% | |
| TCTAATGAAGCAGGTCCATA+GGG | - | chr8.3:17564631-17564650 | None:intergenic | 40.0% | |
| TCTGCCAAAATGCTCAGAAA+TGG | - | chr8.3:17564780-17564799 | None:intergenic | 40.0% | |
| TCTTCTAATTTGGGGAAGTG+AGG | - | chr8.3:17564062-17564081 | None:intergenic | 40.0% | |
| TGATTAAATGTCAAGGGTGG+TGG | + | chr8.3:17564521-17564540 | MS.gene48336:CDS | 40.0% | |
| TGGGGATAAGCACTTCTATA+TGG | + | chr8.3:17564153-17564172 | MS.gene48336:CDS | 40.0% | |
| TTCTTAGTTTCAGCTGACCT+TGG | - | chr8.3:17565359-17565378 | None:intergenic | 40.0% | |
| ! | AATTCTAGCTGAAACCATGC+AGG | - | chr8.3:17564245-17564264 | None:intergenic | 40.0% |
| ! | CCAAGAAGGAGTCTTTTCTT+TGG | - | chr8.3:17565186-17565205 | None:intergenic | 40.0% |
| ! | CTTTTCTTGGACTCAAAAGC+TGG | + | chr8.3:17562971-17562990 | MS.gene48336:intron | 40.0% |
| !! | ATGAAGTTCATTTTGGAGGC+AGG | + | chr8.3:17565393-17565412 | MS.gene48336:CDS | 40.0% |
| AATTAGCTCCACAGCTTCAC+AGG | - | chr8.3:17564272-17564291 | None:intergenic | 45.0% | |
| ACAGGACGTATATACCTTGC+TGG | + | chr8.3:17563998-17564017 | MS.gene48336:CDS | 45.0% | |
| ACCCCAAACAAACAAAGTGC+TGG | - | chr8.3:17563578-17563597 | None:intergenic | 45.0% | |
| ACCTGAAAGTCCAGTTTGGA+TGG | + | chr8.3:17565067-17565086 | MS.gene48336:CDS | 45.0% | |
| ACTACACTGTTCACCACTAG+TGG | - | chr8.3:17563146-17563165 | None:intergenic | 45.0% | |
| AGAGAGTGAAGAGTGAAGCA+TGG | - | chr8.3:17565663-17565682 | None:intergenic | 45.0% | |
| AGGACGTATATACCTTGCTG+GGG | + | chr8.3:17564000-17564019 | MS.gene48336:CDS | 45.0% | |
| AGGCTAAAAAGGAACACTCC+TGG | - | chr8.3:17564184-17564203 | None:intergenic | 45.0% | |
| AGTGTGATTATGGTTGCTGG+AGG | + | chr8.3:17564741-17564760 | MS.gene48336:CDS | 45.0% | |
| ATGGACCTGAAAGTCCAGTT+TGG | + | chr8.3:17565063-17565082 | MS.gene48336:CDS | 45.0% | |
| ATTAGCTCCACAGCTTCACA+GGG | - | chr8.3:17564271-17564290 | None:intergenic | 45.0% | |
| ATTATGGTTGCTGGAGGTAG+TGG | + | chr8.3:17564747-17564766 | MS.gene48336:CDS | 45.0% | |
| ATTTCCATCTGCGATGTCTG+TGG | - | chr8.3:17565323-17565342 | None:intergenic | 45.0% | |
| CACTTCTATATGGTCTTCCC+AGG | + | chr8.3:17564163-17564182 | MS.gene48336:CDS | 45.0% | |
| CAGCCACCATATACAAAGTG+AGG | + | chr8.3:17563600-17563619 | MS.gene48336:CDS | 45.0% | |
| CAGGACGTATATACCTTGCT+GGG | + | chr8.3:17563999-17564018 | MS.gene48336:CDS | 45.0% | |
| CTACACTGTTCACCACTAGT+GGG | - | chr8.3:17563145-17563164 | None:intergenic | 45.0% | |
| CTAGTGGTGAACAGTGTAGT+TGG | + | chr8.3:17563146-17563165 | MS.gene48336:intron | 45.0% | |
| GAAGCGTGTGGATCTGATAT+TGG | + | chr8.3:17565540-17565559 | MS.gene48336:CDS | 45.0% | |
| GACAGTGTGATTATGGTTGC+TGG | + | chr8.3:17564738-17564757 | MS.gene48336:CDS | 45.0% | |
| GGCTAAAAAGGAACACTCCT+GGG | - | chr8.3:17564183-17564202 | None:intergenic | 45.0% | |
| GGTAACGAAGATAACAAGGC+CGG | - | chr8.3:17564041-17564060 | None:intergenic | 45.0% | |
| GTAATAGCAGCCATCCAAAC+TGG | - | chr8.3:17565080-17565099 | None:intergenic | 45.0% | |
| GTCTAATGAAGCAGGTCCAT+AGG | - | chr8.3:17564632-17564651 | None:intergenic | 45.0% | |
| GTTTGGATGGCTGCTATTAC+TGG | + | chr8.3:17565080-17565099 | MS.gene48336:CDS | 45.0% | |
| TCAGCTGACCTTGGATCAAA+GGG | - | chr8.3:17565350-17565369 | None:intergenic | 45.0% | |
| TGTCTTCTCAAACCCACTAG+TGG | + | chr8.3:17563130-17563149 | MS.gene48336:intron | 45.0% | |
| TTCAGCTGACCTTGGATCAA+AGG | - | chr8.3:17565351-17565370 | None:intergenic | 45.0% | |
| ! | AATTTTCCCCTGTGAAGCTG+TGG | + | chr8.3:17564261-17564280 | MS.gene48336:CDS | 45.0% |
| ! | ACTGATTCCTTCATGCTCTC+AGG | - | chr8.3:17565582-17565601 | None:intergenic | 45.0% |
| ! | CGCCAGCACTTTGTTTGTTT+GGG | + | chr8.3:17563573-17563592 | MS.gene48336:CDS | 45.0% |
| ! | GCCAGCACTTTGTTTGTTTG+GGG | + | chr8.3:17563574-17563593 | MS.gene48336:CDS | 45.0% |
| ! | GCTGAAACCATGCAGGTTTT+TGG | - | chr8.3:17564238-17564257 | None:intergenic | 45.0% |
| ! | TGAGAGCATGAAGGAATCAG+TGG | + | chr8.3:17565581-17565600 | MS.gene48336:CDS | 45.0% |
| CAAGTGTAATCTCCCCAGCA+AGG | - | chr8.3:17564015-17564034 | None:intergenic | 50.0% | |
| GCCATCCAAACTGGACTTTC+AGG | - | chr8.3:17565071-17565090 | None:intergenic | 50.0% | |
| GGAGGCAGGCCTAACTTTAA+AGG | + | chr8.3:17565407-17565426 | MS.gene48336:CDS | 50.0% | |
| GTCTGTGGAACGCCTTTCTT+AGG | - | chr8.3:17565308-17565327 | None:intergenic | 50.0% | |
| GTTGCAATTGAAGGGCCCTA+TGG | + | chr8.3:17564613-17564632 | MS.gene48336:CDS | 50.0% | |
| TAGGGCCCTTCAATTGCAAC+AGG | - | chr8.3:17564613-17564632 | None:intergenic | 50.0% | |
| TGCAGAAGTGGAAGGAGTTC+AGG | + | chr8.3:17563098-17563117 | MS.gene48336:intron | 50.0% | |
| TGGATGGCTGCTATTACTGG+AGG | + | chr8.3:17565083-17565102 | MS.gene48336:CDS | 50.0% | |
| TTAGCTCCACAGCTTCACAG+GGG | - | chr8.3:17564270-17564289 | None:intergenic | 50.0% | |
| ! | GCGCCAGCACTTTGTTTGTT+TGG | + | chr8.3:17563572-17563591 | MS.gene48336:CDS | 50.0% |
| ! | GGGGAGATTACACTTGTTGC+CGG | + | chr8.3:17564019-17564038 | MS.gene48336:CDS | 50.0% |
| ! | TTGTGGTCCTGAGAGCATGA+AGG | + | chr8.3:17565572-17565591 | MS.gene48336:CDS | 50.0% |
| CGTTCCACAGACATCGCAGA+TGG | + | chr8.3:17565316-17565335 | MS.gene48336:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 17562890 | 17565698 | 17562890 | ID=MS.gene48336 |
| chr8.3 | mRNA | 17562890 | 17565698 | 17562890 | ID=MS.gene48336.t1;Parent=MS.gene48336 |
| chr8.3 | exon | 17562890 | 17562899 | 17562890 | ID=MS.gene48336.t1.exon1;Parent=MS.gene48336.t1 |
| chr8.3 | CDS | 17562890 | 17562899 | 17562890 | ID=cds.MS.gene48336.t1;Parent=MS.gene48336.t1 |
| chr8.3 | exon | 17563213 | 17563294 | 17563213 | ID=MS.gene48336.t1.exon2;Parent=MS.gene48336.t1 |
| chr8.3 | CDS | 17563213 | 17563294 | 17563213 | ID=cds.MS.gene48336.t1;Parent=MS.gene48336.t1 |
| chr8.3 | exon | 17563384 | 17563621 | 17563384 | ID=MS.gene48336.t1.exon3;Parent=MS.gene48336.t1 |
| chr8.3 | CDS | 17563384 | 17563621 | 17563384 | ID=cds.MS.gene48336.t1;Parent=MS.gene48336.t1 |
| chr8.3 | exon | 17563980 | 17564307 | 17563980 | ID=MS.gene48336.t1.exon4;Parent=MS.gene48336.t1 |
| chr8.3 | CDS | 17563980 | 17564307 | 17563980 | ID=cds.MS.gene48336.t1;Parent=MS.gene48336.t1 |
| chr8.3 | exon | 17564401 | 17564659 | 17564401 | ID=MS.gene48336.t1.exon5;Parent=MS.gene48336.t1 |
| chr8.3 | CDS | 17564401 | 17564659 | 17564401 | ID=cds.MS.gene48336.t1;Parent=MS.gene48336.t1 |
| chr8.3 | exon | 17564734 | 17565428 | 17564734 | ID=MS.gene48336.t1.exon6;Parent=MS.gene48336.t1 |
| chr8.3 | CDS | 17564734 | 17565428 | 17564734 | ID=cds.MS.gene48336.t1;Parent=MS.gene48336.t1 |
| chr8.3 | exon | 17565517 | 17565698 | 17565517 | ID=MS.gene48336.t1.exon7;Parent=MS.gene48336.t1 |
| chr8.3 | CDS | 17565517 | 17565698 | 17565517 | ID=cds.MS.gene48336.t1;Parent=MS.gene48336.t1 |
| Gene Sequence |
| Protein sequence |
