Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48793.t1 | XP_003605354.2 | 95 | 401 | 16 | 2 | 1 | 398 | 1 | 400 | 5.30E-200 | 707.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48793.t1 | Q6R567 | 43.2 | 111 | 54 | 2 | 114 | 215 | 21 | 131 | 4.2e-20 | 100.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48793.t1 | G7JJK5 | 95.0 | 401 | 16 | 2 | 1 | 398 | 1 | 400 | 3.8e-200 | 707.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene48793 | 0.803969 | 2.70E-49 | -1.69E-46 |
| MS.gene049585 | MS.gene48793 | 0.830361 | 3.07E-55 | -1.69E-46 |
| MS.gene051066 | MS.gene48793 | 0.803367 | 3.61E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene48793 | 0.824569 | 7.52E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene48793 | 0.801903 | 7.23E-49 | -1.69E-46 |
| MS.gene051210 | MS.gene48793 | 0.814168 | 1.77E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene48793 | 0.802654 | 5.06E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene48793 | 0.800648 | 1.31E-48 | -1.69E-46 |
| MS.gene055623 | MS.gene48793 | 0.806794 | 6.92E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene48793 | 0.811182 | 7.96E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene48793 | 0.811395 | 7.15E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene48793 | 0.815845 | 7.50E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene48793 | 0.807131 | 5.87E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene48793 | 0.81752 | 3.16E-52 | -1.69E-46 |
| MS.gene05897 | MS.gene48793 | 0.801006 | 1.10E-48 | -1.69E-46 |
| MS.gene059439 | MS.gene48793 | 0.808626 | 2.82E-50 | -1.69E-46 |
| MS.gene059725 | MS.gene48793 | 0.816739 | 4.74E-52 | -1.69E-46 |
| MS.gene059952 | MS.gene48793 | 0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene48793 | 0.80163 | 8.22E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene48793 | 0.80126 | 9.79E-49 | -1.69E-46 |
| MS.gene060918 | MS.gene48793 | 0.810583 | 1.07E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48793.t1 | MTR_4g029440 | 95.012 | 401 | 16 | 2 | 1 | 398 | 1 | 400 | 0.0 | 747 |
| MS.gene48793.t1 | MTR_4g029440 | 94.924 | 394 | 16 | 2 | 8 | 398 | 2 | 394 | 0.0 | 733 |
| MS.gene48793.t1 | MTR_2g061230 | 43.893 | 262 | 115 | 8 | 1 | 260 | 1 | 232 | 1.16e-54 | 183 |
| MS.gene48793.t1 | MTR_7g093390 | 37.993 | 279 | 139 | 7 | 129 | 380 | 167 | 438 | 4.42e-47 | 169 |
| MS.gene48793.t1 | MTR_1g054280 | 56.044 | 91 | 38 | 2 | 127 | 216 | 71 | 160 | 9.97e-30 | 117 |
| MS.gene48793.t1 | MTR_1g054260 | 48.780 | 123 | 45 | 5 | 125 | 232 | 77 | 196 | 1.94e-29 | 115 |
| MS.gene48793.t1 | MTR_1g054210 | 52.381 | 105 | 42 | 4 | 117 | 218 | 109 | 208 | 2.44e-28 | 112 |
| MS.gene48793.t1 | MTR_1g054465 | 45.926 | 135 | 48 | 7 | 125 | 239 | 45 | 174 | 3.20e-28 | 111 |
| MS.gene48793.t1 | MTR_2g090330 | 46.667 | 90 | 44 | 1 | 130 | 215 | 28 | 117 | 4.29e-27 | 107 |
| MS.gene48793.t1 | MTR_2g090330 | 46.667 | 90 | 44 | 1 | 130 | 215 | 31 | 120 | 2.24e-25 | 102 |
| MS.gene48793.t1 | MTR_2g090325 | 47.727 | 88 | 38 | 2 | 127 | 214 | 15 | 94 | 3.59e-23 | 97.4 |
| MS.gene48793.t1 | MTR_5g019300 | 45.977 | 87 | 46 | 1 | 132 | 218 | 35 | 120 | 5.01e-23 | 98.2 |
| MS.gene48793.t1 | MTR_1g021895 | 45.055 | 91 | 48 | 2 | 128 | 218 | 27 | 115 | 7.51e-23 | 97.4 |
| MS.gene48793.t1 | MTR_8g465910 | 46.392 | 97 | 42 | 3 | 127 | 215 | 41 | 135 | 4.85e-22 | 95.5 |
| MS.gene48793.t1 | MTR_2g090295 | 38.462 | 130 | 65 | 4 | 92 | 214 | 8 | 129 | 1.94e-21 | 94.0 |
| MS.gene48793.t1 | MTR_4g088870 | 39.423 | 104 | 54 | 2 | 125 | 219 | 25 | 128 | 1.27e-20 | 90.1 |
| MS.gene48793.t1 | MTR_2g013550 | 39.091 | 110 | 50 | 3 | 116 | 213 | 11 | 115 | 5.53e-20 | 89.4 |
| MS.gene48793.t1 | MTR_4g088875 | 35.514 | 107 | 59 | 2 | 123 | 219 | 22 | 128 | 1.19e-19 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48793.t1 | AT2G44410 | 42.460 | 252 | 118 | 5 | 1 | 245 | 10 | 241 | 2.07e-52 | 183 |
| MS.gene48793.t1 | AT3G58030 | 50.365 | 137 | 57 | 6 | 113 | 244 | 114 | 244 | 5.77e-35 | 136 |
| MS.gene48793.t1 | AT3G58030 | 50.365 | 137 | 57 | 6 | 113 | 244 | 114 | 244 | 5.77e-35 | 136 |
| MS.gene48793.t1 | AT3G58030 | 50.365 | 137 | 57 | 6 | 113 | 244 | 114 | 244 | 5.77e-35 | 136 |
| MS.gene48793.t1 | AT3G58030 | 50.365 | 137 | 57 | 6 | 113 | 244 | 114 | 244 | 5.77e-35 | 136 |
| MS.gene48793.t1 | AT1G74990 | 45.794 | 107 | 57 | 1 | 125 | 231 | 10 | 115 | 7.54e-30 | 114 |
| MS.gene48793.t1 | AT2G42030 | 31.646 | 316 | 172 | 11 | 93 | 378 | 100 | 401 | 1.15e-28 | 118 |
| MS.gene48793.t1 | AT1G19310 | 48.276 | 87 | 44 | 1 | 132 | 218 | 21 | 106 | 6.28e-24 | 100 |
| MS.gene48793.t1 | AT2G23780 | 45.977 | 87 | 46 | 1 | 132 | 218 | 26 | 111 | 7.12e-23 | 97.4 |
| MS.gene48793.t1 | AT2G23780 | 45.977 | 87 | 46 | 1 | 132 | 218 | 26 | 111 | 7.12e-23 | 97.4 |
| MS.gene48793.t1 | AT2G23780 | 45.977 | 87 | 46 | 1 | 132 | 218 | 26 | 111 | 7.12e-23 | 97.4 |
| MS.gene48793.t1 | AT4G28270 | 44.144 | 111 | 40 | 4 | 128 | 223 | 15 | 118 | 1.52e-22 | 95.5 |
| MS.gene48793.t1 | AT4G27470 | 35.200 | 125 | 64 | 3 | 132 | 243 | 42 | 162 | 7.44e-19 | 86.3 |
| MS.gene48793.t1 | AT4G03510 | 43.956 | 91 | 38 | 4 | 132 | 214 | 46 | 131 | 2.06e-18 | 85.1 |
| MS.gene48793.t1 | AT4G03510 | 43.956 | 91 | 38 | 4 | 132 | 214 | 46 | 131 | 2.06e-18 | 85.1 |
| MS.gene48793.t1 | AT4G03510 | 43.956 | 91 | 38 | 4 | 132 | 214 | 46 | 131 | 2.06e-18 | 85.1 |
| MS.gene48793.t1 | AT4G03510 | 43.956 | 91 | 38 | 4 | 132 | 214 | 46 | 131 | 2.06e-18 | 85.1 |
Find 115 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGGTATTATTCCAATTTA+TGG | 0.104536 | 4.4:+73485223 | MS.gene48793:CDS |
| CCATTTCCATGTCCATAAAT+TGG | 0.194274 | 4.4:-73485235 | None:intergenic |
| GTTGATAATGTTGCTGTTAT+AGG | 0.203344 | 4.4:+73487322 | MS.gene48793:CDS |
| TTATCAACATTCCTACTTAA+AGG | 0.205288 | 4.4:-73485802 | None:intergenic |
| CTATCAGGTGTGGTACTATT+AGG | 0.241873 | 4.4:-73485448 | None:intergenic |
| CATAACCGAATTGGTGGATT+TGG | 0.278139 | 4.4:+73485403 | MS.gene48793:CDS |
| GTTGATAATGTTGCTGTTGC+AGG | 0.300831 | 4.4:+73485817 | MS.gene48793:CDS |
| TATCAGGTGTGGTACTATTA+GGG | 0.315528 | 4.4:-73485447 | None:intergenic |
| CTTCTATTGTCCAAAGTATT+CGG | 0.320027 | 4.4:+73485374 | MS.gene48793:CDS |
| GACCTTGAATCCTATATTAA+TGG | 0.321639 | 4.4:+73485631 | MS.gene48793:CDS |
| GGCAAACCATTGTTTCTATC+AGG | 0.323588 | 4.4:-73485463 | None:intergenic |
| CTTTGATTGTAATATTTGTT+TGG | 0.349272 | 4.4:+73485075 | MS.gene48793:CDS |
| TGATTTGAATCAGGAGCCTT+TGG | 0.350787 | 4.4:+73484691 | MS.gene48793:CDS |
| TGTATTGTGACCATTAATAT+AGG | 0.361891 | 4.4:-73485641 | None:intergenic |
| TATGAAACCGCCGAATACTT+TGG | 0.373232 | 4.4:-73485384 | None:intergenic |
| TTCGAGAGCGAGGCAGCGTC+GGG | 0.374026 | 4.4:+73484820 | MS.gene48793:CDS |
| ATTCAGATAACCAATGTTAC+AGG | 0.375175 | 4.4:+73484866 | MS.gene48793:CDS |
| TTCTGCTGAAAGATTAGTTC+AGG | 0.376998 | 4.4:+73485609 | MS.gene48793:CDS |
| CGGCGGTTTCATAACCGAAT+TGG | 0.383576 | 4.4:+73485394 | MS.gene48793:CDS |
| CCAATTTATGGACATGGAAA+TGG | 0.384021 | 4.4:+73485235 | MS.gene48793:CDS |
| TATGGAGCTTGATTTGAATC+AGG | 0.400185 | 4.4:+73484682 | None:intergenic |
| CTCTCGAAGTAATTGCTTCA+AGG | 0.402049 | 4.4:-73484805 | None:intergenic |
| GGAGCGAAACGATGCTGATC+AGG | 0.412122 | 4.4:+73484934 | MS.gene48793:CDS |
| TGAACATGGTGGTTCTCAAC+AGG | 0.413573 | 4.4:+73485516 | MS.gene48793:CDS |
| AGCTGCTGCAGCTACAGAAT+TGG | 0.416919 | 4.4:-73485770 | None:intergenic |
| TGCAGTTTCTCCTGTAACAT+TGG | 0.419434 | 4.4:-73484876 | None:intergenic |
| CTTCTCTTTCTCCTTTAAGT+AGG | 0.422331 | 4.4:+73485791 | MS.gene48793:CDS |
| GTGGTTCTCAACAGGTTTCA+AGG | 0.428291 | 4.4:+73485524 | MS.gene48793:CDS |
| TATATTAATGGTCACAATAC+AGG | 0.430809 | 4.4:+73485643 | MS.gene48793:CDS |
| GACCATTAATATAGGATTCA+AGG | 0.432784 | 4.4:-73485633 | None:intergenic |
| ATCTGAATCCGAGAGGAGTT+CGG | 0.434023 | 4.4:-73484851 | None:intergenic |
| CTTCTTCTACCGTTTGATGA+AGG | 0.434123 | 4.4:-73487394 | None:intergenic |
| GTTACCTCCCCTTTACAAAC+AGG | 0.438464 | 4.4:-73485196 | None:intergenic |
| TTGCTTCAAGGTGTGTGATT+CGG | 0.441946 | 4.4:-73484793 | None:intergenic |
| GTCTGCGTGCGAGACTGAAC+AGG | 0.444476 | 4.4:-73485484 | None:intergenic |
| GGGATGGAAGAGATTGATAA+TGG | 0.448635 | 4.4:+73485025 | MS.gene48793:CDS |
| GTTCTCCAAATCCACCAATT+CGG | 0.449571 | 4.4:-73485408 | None:intergenic |
| AGGAATGTCCTGTTTGTAAA+GGG | 0.451056 | 4.4:+73485188 | MS.gene48793:CDS |
| AGTCATTTCGATATTCTTGT+TGG | 0.454214 | 4.4:-73487448 | None:intergenic |
| AACTTACAGATTAGTCTGTT+AGG | 0.454880 | 4.4:+73487370 | MS.gene48793:CDS |
| TGACCACAACATGTCAAAAC+AGG | 0.454953 | 4.4:-73485112 | None:intergenic |
| TAGAAGAAGAAGATGCTCCT+TGG | 0.455800 | 4.4:-73485357 | None:intergenic |
| TAAAGGGGAGGTAACTGAAT+CGG | 0.458742 | 4.4:+73485204 | MS.gene48793:CDS |
| TTCTTCTACCGTTTGATGAA+GGG | 0.462737 | 4.4:-73487393 | None:intergenic |
| CTCTCAACTCTAGGTGCCTT+AGG | 0.467180 | 4.4:-73485313 | None:intergenic |
| GTGATGTTCAAGGCGAAGAA+TGG | 0.473361 | 4.4:+73484906 | MS.gene48793:CDS |
| AGAAGAAGAAGATGCTCCTT+GGG | 0.474601 | 4.4:-73485356 | None:intergenic |
| GGTAAAGTGGAGGAGAGTAG+TGG | 0.474653 | 4.4:+73485046 | MS.gene48793:CDS |
| CGGTTTCATAACCGAATTGG+TGG | 0.476371 | 4.4:+73485397 | MS.gene48793:CDS |
| TCAAACGGTAGAAGAAGAAA+TGG | 0.486110 | 4.4:+73487400 | MS.gene48793:CDS |
| GGTTGCCGCCGAACTCCTCT+CGG | 0.492462 | 4.4:+73484843 | MS.gene48793:CDS |
| CTTGACCACGACTCTCTGAC+TGG | 0.492720 | 4.4:-73485732 | None:intergenic |
| AGAGATTGATAATGGTAAAG+TGG | 0.493881 | 4.4:+73485033 | MS.gene48793:CDS |
| CATTTGATAGCAAAAGCTCT+AGG | 0.498838 | 4.4:+73485004 | MS.gene48793:CDS |
| TATGTTGGAAGAACTTGAAT+CGG | 0.499655 | 4.4:+73484751 | MS.gene48793:CDS |
| GAGAGTTCCTCCTCGACCTA+AGG | 0.502667 | 4.4:+73485297 | MS.gene48793:CDS |
| AAGGAATGTCCTGTTTGTAA+AGG | 0.503450 | 4.4:+73485187 | MS.gene48793:CDS |
| CTTCGAGAGCGAGGCAGCGT+CGG | 0.509799 | 4.4:+73484819 | MS.gene48793:CDS |
| CTGTTAGGCCCTTCATCAAA+CGG | 0.510703 | 4.4:+73487385 | MS.gene48793:CDS |
| ATCAGCATTAAATTCTGCAA+TGG | 0.517331 | 4.4:+73485585 | MS.gene48793:CDS |
| AAAGGGGAGGTAACTGAATC+GGG | 0.517863 | 4.4:+73485205 | MS.gene48793:CDS |
| ATTATTCCAATTTATGGACA+TGG | 0.526065 | 4.4:+73485229 | MS.gene48793:CDS |
| AACGATGCTGATCAGGAGGA+AGG | 0.533514 | 4.4:+73484941 | MS.gene48793:CDS |
| GTAAAGTGGAGGAGAGTAGT+GGG | 0.535109 | 4.4:+73485047 | MS.gene48793:CDS |
| TACAACTGATAGAAATGTAC+AGG | 0.535539 | 4.4:+73485852 | MS.gene48793:CDS |
| GCAACAGCAGGTGATGTTCA+AGG | 0.537071 | 4.4:+73484896 | MS.gene48793:CDS |
| TCGAGGAGGAACTCTCAAAC+CGG | 0.538001 | 4.4:-73485290 | None:intergenic |
| ACTCTAGGTGCCTTAGGTCG+AGG | 0.546117 | 4.4:-73485307 | None:intergenic |
| CAGATGGAAATGAAAGAAGC+CGG | 0.547924 | 4.4:+73485271 | MS.gene48793:CDS |
| GTTGAATTTCTAGTAACAGT+AGG | 0.548372 | 4.4:-73485688 | None:intergenic |
| GAATTTCTAGTAACAGTAGG+AGG | 0.555492 | 4.4:-73485685 | None:intergenic |
| TGTCTAATACTCTCAACTCT+AGG | 0.555708 | 4.4:-73485322 | None:intergenic |
| GGATAGTTGAAAGTGTGAAA+GGG | 0.557671 | 4.4:+73484963 | MS.gene48793:CDS |
| GTTTCAAGGTTGCTAGAGCA+AGG | 0.560862 | 4.4:+73485538 | MS.gene48793:CDS |
| GATAGTTGAAAGTGTGAAAG+GGG | 0.566431 | 4.4:+73484964 | MS.gene48793:CDS |
| ATGTTCAAGGCGAAGAATGG+AGG | 0.569986 | 4.4:+73484909 | MS.gene48793:CDS |
| ACAGGAGAAACTGCAACAGC+AGG | 0.572374 | 4.4:+73484884 | MS.gene48793:CDS |
| GGGATAGTTGAAAGTGTGAA+AGG | 0.577330 | 4.4:+73484962 | MS.gene48793:CDS |
| CGAGAGCGAGGCAGCGTCGG+GGG | 0.578008 | 4.4:+73484822 | MS.gene48793:CDS |
| TAGTTGAAAGTGTGAAAGGG+GGG | 0.581279 | 4.4:+73484966 | MS.gene48793:CDS |
| GTACTAGTTTGATGATCCAA+AGG | 0.581639 | 4.4:-73484707 | None:intergenic |
| ATTTGATAGCAAAAGCTCTA+GGG | 0.584132 | 4.4:+73485005 | MS.gene48793:CDS |
| GATTGATAATGGTAAAGTGG+AGG | 0.594410 | 4.4:+73485036 | MS.gene48793:CDS |
| ACCATTGTTTCTATCAGGTG+TGG | 0.595045 | 4.4:-73485458 | None:intergenic |
| TATGGACATGGAAATGGCGG+CGG | 0.603447 | 4.4:+73485241 | MS.gene48793:CDS |
| ACGATGCTGATCAGGAGGAA+GGG | 0.604607 | 4.4:+73484942 | MS.gene48793:CDS |
| TGGCGGCGGTGATTGTCAGA+TGG | 0.606714 | 4.4:+73485255 | MS.gene48793:CDS |
| GATAGCAAAAGCTCTAGGGA+TGG | 0.616270 | 4.4:+73485009 | MS.gene48793:CDS |
| TCTTCATCTAGAGGTAGAAG+AGG | 0.623511 | 4.4:+73485892 | MS.gene48793:intron |
| TCGAGAGCGAGGCAGCGTCG+GGG | 0.626763 | 4.4:+73484821 | MS.gene48793:CDS |
| GCGTTCATTTGATTCTATGT+TGG | 0.627040 | 4.4:+73484736 | MS.gene48793:CDS |
| TGTTCAAGGCGAAGAATGGA+GGG | 0.627889 | 4.4:+73484910 | MS.gene48793:CDS |
| GCGAAACGATGCTGATCAGG+AGG | 0.630441 | 4.4:+73484937 | MS.gene48793:CDS |
| ATAGTTGAAAGTGTGAAAGG+GGG | 0.631256 | 4.4:+73484965 | MS.gene48793:CDS |
| AGACAGAGGTTGCTAACCCA+AGG | 0.632250 | 4.4:+73485340 | MS.gene48793:CDS |
| CAGACAGACAATAATGAACA+TGG | 0.634072 | 4.4:+73485502 | MS.gene48793:CDS |
| AAGCAATTACTTCGAGAGCG+AGG | 0.636181 | 4.4:+73484810 | MS.gene48793:CDS |
| TCAACATTCCTATTTAACAG+AGG | 0.637888 | 4.4:-73487304 | None:intergenic |
| ACCACACCTGATAGAAACAA+TGG | 0.638268 | 4.4:+73485457 | MS.gene48793:CDS |
| AGCAGCTGTAGAATCAGTCA+TGG | 0.639136 | 4.4:-73487269 | None:intergenic |
| ATGTCCTGTTTGTAAAGGGG+AGG | 0.641102 | 4.4:+73485192 | MS.gene48793:CDS |
| ATTTATGGACATGGAAATGG+CGG | 0.647005 | 4.4:+73485238 | MS.gene48793:CDS |
| GAGTTGAGAGTATTAGACAG+AGG | 0.654945 | 4.4:+73485326 | MS.gene48793:CDS |
| GGAATGTCCTGTTTGTAAAG+GGG | 0.658869 | 4.4:+73485189 | MS.gene48793:CDS |
| CTATTGTCCAAAGTATTCGG+CGG | 0.665724 | 4.4:+73485377 | MS.gene48793:CDS |
| ATTAATGGTCACAATACAGG+AGG | 0.672550 | 4.4:+73485646 | MS.gene48793:CDS |
| AGGCTCAGAAATTCAGACAA+CGG | 0.673554 | 4.4:+73487342 | MS.gene48793:CDS |
| CTAGGTGCCTTAGGTCGAGG+AGG | 0.679868 | 4.4:-73485304 | None:intergenic |
| GTATGCGTATTCGAAAGCAA+AGG | 0.694045 | 4.4:+73485168 | MS.gene48793:CDS |
| ACAAACCAGTCAGAGAGTCG+TGG | 0.695607 | 4.4:+73485727 | MS.gene48793:CDS |
| TACGATAACTGATAGAAACA+CGG | 0.706100 | 4.4:-73485148 | None:intergenic |
| TGAATCCGAGAGGAGTTCGG+CGG | 0.720440 | 4.4:-73484848 | None:intergenic |
| TCAAGGCGAAGAATGGAGGG+AGG | 0.730542 | 4.4:+73484913 | MS.gene48793:CDS |
| ATTGGTTATCTGAATCCGAG+AGG | 0.732391 | 4.4:-73484858 | None:intergenic |
| ACAGACAATAATGAACATGG+TGG | 0.774155 | 4.4:+73485505 | MS.gene48793:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAAAATTAATTTAAAATGA+AGG | + | chr4.4:73487076-73487095 | MS.gene48793:intron | 10.0% |
| !! | AACATATTTGATATTTGTCT+TGG | - | chr4.4:73486079-73486098 | None:intergenic | 20.0% |
| !! | ATCTAATAAAGAACATGTAA+AGG | - | chr4.4:73486496-73486515 | None:intergenic | 20.0% |
| !! | CTTTGATTGTAATATTTGTT+TGG | + | chr4.4:73485075-73485094 | MS.gene48793:CDS | 20.0% |
| !! | TCTAATAAAGAACATGTAAA+GGG | - | chr4.4:73486495-73486514 | None:intergenic | 20.0% |
| !! | TTAAACTGTTTATCCAAATA+GGG | + | chr4.4:73486385-73486404 | MS.gene48793:intron | 20.0% |
| !!! | AGTTTGTTGTATATATCATA+TGG | - | chr4.4:73486789-73486808 | None:intergenic | 20.0% |
| !!! | AGTTTTATTCAATAGATGTA+AGG | + | chr4.4:73486126-73486145 | MS.gene48793:intron | 20.0% |
| !!! | TCTTTTGAATATCTAGTTTT+TGG | + | chr4.4:73486525-73486544 | MS.gene48793:intron | 20.0% |
| ! | ACTCTAATGTTAAGCTAATT+AGG | - | chr4.4:73486889-73486908 | None:intergenic | 25.0% |
| ! | ATTATTCCAATTTATGGACA+TGG | + | chr4.4:73485229-73485248 | MS.gene48793:CDS | 25.0% |
| ! | CAAAAAAAGATAGAGACTTA+TGG | + | chr4.4:73487189-73487208 | MS.gene48793:intron | 25.0% |
| ! | GTTAAACTGTTTATCCAAAT+AGG | + | chr4.4:73486384-73486403 | MS.gene48793:intron | 25.0% |
| ! | GTTCTTTATTAGATCTATCT+TGG | + | chr4.4:73486502-73486521 | MS.gene48793:intron | 25.0% |
| ! | TATATTAATGGTCACAATAC+AGG | + | chr4.4:73485643-73485662 | MS.gene48793:CDS | 25.0% |
| ! | TGTATTGTGACCATTAATAT+AGG | - | chr4.4:73485644-73485663 | None:intergenic | 25.0% |
| ! | TTATCAACATTCCTACTTAA+AGG | - | chr4.4:73485805-73485824 | None:intergenic | 25.0% |
| !! | ACTTAAGTTTTCTGTCTTTA+TGG | - | chr4.4:73487052-73487071 | None:intergenic | 25.0% |
| !! | ACTTATTTGAGATTATCTAC+TGG | + | chr4.4:73486169-73486188 | MS.gene48793:intron | 25.0% |
| !! | ATGATGATCTTTTATGTAAG+TGG | + | chr4.4:73485969-73485988 | MS.gene48793:intron | 25.0% |
| !! | CATAAACTATAGAGTATTAG+AGG | - | chr4.4:73486654-73486673 | None:intergenic | 25.0% |
| !! | CATGATTGTTTCTTCTTATA+AGG | + | chr4.4:73486731-73486750 | MS.gene48793:intron | 25.0% |
| !!! | TATCTAGTTTTTGGATCTTT+TGG | + | chr4.4:73486534-73486553 | MS.gene48793:intron | 25.0% |
| ATCAGCATTAAATTCTGCAA+TGG | + | chr4.4:73485585-73485604 | MS.gene48793:CDS | 30.0% | |
| ATTCAGATAACCAATGTTAC+AGG | + | chr4.4:73484866-73484885 | MS.gene48793:CDS | 30.0% | |
| CATACTGTAACAAACATAAG+AGG | - | chr4.4:73486429-73486448 | None:intergenic | 30.0% | |
| CATGCAACATGTTGTATTAT+CGG | + | chr4.4:73486696-73486715 | MS.gene48793:intron | 30.0% | |
| GACCATTAATATAGGATTCA+AGG | - | chr4.4:73485636-73485655 | None:intergenic | 30.0% | |
| GACCTTGAATCCTATATTAA+TGG | + | chr4.4:73485631-73485650 | MS.gene48793:CDS | 30.0% | |
| GATTACTTGAATACAAGCTT+TGG | + | chr4.4:73486621-73486640 | MS.gene48793:intron | 30.0% | |
| GCAATGCATATGATCTTTAT+GGG | - | chr4.4:73486677-73486696 | None:intergenic | 30.0% | |
| TACAACTGATAGAAATGTAC+AGG | + | chr4.4:73485852-73485871 | MS.gene48793:CDS | 30.0% | |
| TACGATAACTGATAGAAACA+CGG | - | chr4.4:73485151-73485170 | None:intergenic | 30.0% | |
| TATGTTGGAAGAACTTGAAT+CGG | + | chr4.4:73484751-73484770 | MS.gene48793:CDS | 30.0% | |
| TCAAATAAGTCAATCCAAAC+AGG | - | chr4.4:73486159-73486178 | None:intergenic | 30.0% | |
| TCAACATTCCTATTTAACAG+AGG | - | chr4.4:73487307-73487326 | None:intergenic | 30.0% | |
| TCGGGTATTATTCCAATTTA+TGG | + | chr4.4:73485223-73485242 | MS.gene48793:CDS | 30.0% | |
| TGCAATGCATATGATCTTTA+TGG | - | chr4.4:73486678-73486697 | None:intergenic | 30.0% | |
| ! | ATTTGATAGCAAAAGCTCTA+GGG | + | chr4.4:73485005-73485024 | MS.gene48793:CDS | 30.0% |
| ! | CTCTTATGTTTGTTACAGTA+TGG | + | chr4.4:73486427-73486446 | MS.gene48793:intron | 30.0% |
| ! | CTTCTATTGTCCAAAGTATT+CGG | + | chr4.4:73485374-73485393 | MS.gene48793:CDS | 30.0% |
| ! | TCGGTTTCGTATATTTTCTT+CGG | - | chr4.4:73484777-73484796 | None:intergenic | 30.0% |
| ! | TTTTGGTCAGTATTCAGATT+GGG | + | chr4.4:73486551-73486570 | MS.gene48793:intron | 30.0% |
| !! | AACTTACAGATTAGTCTGTT+AGG | + | chr4.4:73487370-73487389 | MS.gene48793:CDS | 30.0% |
| !! | AGAGATTGATAATGGTAAAG+TGG | + | chr4.4:73485033-73485052 | MS.gene48793:CDS | 30.0% |
| !! | GTTGAATTTCTAGTAACAGT+AGG | - | chr4.4:73485691-73485710 | None:intergenic | 30.0% |
| !! | GTTGATAATGTTGCTGTTAT+AGG | + | chr4.4:73487322-73487341 | MS.gene48793:CDS | 30.0% |
| AAGGAATGTCCTGTTTGTAA+AGG | + | chr4.4:73485187-73485206 | MS.gene48793:CDS | 35.0% | |
| ACAGACAATAATGAACATGG+TGG | + | chr4.4:73485505-73485524 | MS.gene48793:CDS | 35.0% | |
| AGAGGATATTGACAATTAGC+AGG | - | chr4.4:73486411-73486430 | None:intergenic | 35.0% | |
| AGGAATGTCCTGTTTGTAAA+GGG | + | chr4.4:73485188-73485207 | MS.gene48793:CDS | 35.0% | |
| ATCCTGTTGTTGCATGTAAT+AGG | + | chr4.4:73487223-73487242 | MS.gene48793:intron | 35.0% | |
| ATTAATGGTCACAATACAGG+AGG | + | chr4.4:73485646-73485665 | MS.gene48793:CDS | 35.0% | |
| ATTTATGGACATGGAAATGG+CGG | + | chr4.4:73485238-73485257 | MS.gene48793:CDS | 35.0% | |
| CAGACAGACAATAATGAACA+TGG | + | chr4.4:73485502-73485521 | MS.gene48793:CDS | 35.0% | |
| CCAATTTATGGACATGGAAA+TGG | + | chr4.4:73485235-73485254 | MS.gene48793:CDS | 35.0% | |
| CCATTTCCATGTCCATAAAT+TGG | - | chr4.4:73485238-73485257 | None:intergenic | 35.0% | |
| CTTCTCTTTCTCCTTTAAGT+AGG | + | chr4.4:73485791-73485810 | MS.gene48793:CDS | 35.0% | |
| GCGTTCATTTGATTCTATGT+TGG | + | chr4.4:73484736-73484755 | MS.gene48793:CDS | 35.0% | |
| TATCAGGTGTGGTACTATTA+GGG | - | chr4.4:73485450-73485469 | None:intergenic | 35.0% | |
| TATTTCCACTCCTTCTGTAT+TGG | + | chr4.4:73486943-73486962 | MS.gene48793:intron | 35.0% | |
| TCAAACGGTAGAAGAAGAAA+TGG | + | chr4.4:73487400-73487419 | MS.gene48793:CDS | 35.0% | |
| TCCTGTTGTTGCATGTAATA+GGG | + | chr4.4:73487224-73487243 | MS.gene48793:intron | 35.0% | |
| TGTAAGGATATTTGCCTGTT+TGG | + | chr4.4:73486142-73486161 | MS.gene48793:intron | 35.0% | |
| TGTCTAATACTCTCAACTCT+AGG | - | chr4.4:73485325-73485344 | None:intergenic | 35.0% | |
| TTCTACCTCTAGATGAAGAA+GGG | - | chr4.4:73485891-73485910 | None:intergenic | 35.0% | |
| TTCTTCTACCGTTTGATGAA+GGG | - | chr4.4:73487396-73487415 | None:intergenic | 35.0% | |
| ! | ATAGTTGAAAGTGTGAAAGG+GGG | + | chr4.4:73484965-73484984 | MS.gene48793:CDS | 35.0% |
| ! | CATTTGATAGCAAAAGCTCT+AGG | + | chr4.4:73485004-73485023 | MS.gene48793:CDS | 35.0% |
| ! | CTTTTGGTCAGTATTCAGAT+TGG | + | chr4.4:73486550-73486569 | MS.gene48793:intron | 35.0% |
| ! | CTTTTGTGCCTCTGTTAAAT+AGG | + | chr4.4:73487296-73487315 | MS.gene48793:CDS | 35.0% |
| ! | GATAGTTGAAAGTGTGAAAG+GGG | + | chr4.4:73484964-73484983 | MS.gene48793:CDS | 35.0% |
| ! | GGATAGTTGAAAGTGTGAAA+GGG | + | chr4.4:73484963-73484982 | MS.gene48793:CDS | 35.0% |
| ! | GTACTAGTTTGATGATCCAA+AGG | - | chr4.4:73484710-73484729 | None:intergenic | 35.0% |
| ! | TTCTGCTGAAAGATTAGTTC+AGG | + | chr4.4:73485609-73485628 | MS.gene48793:CDS | 35.0% |
| !! | GAATTTCTAGTAACAGTAGG+AGG | - | chr4.4:73485688-73485707 | None:intergenic | 35.0% |
| !! | GATTGATAATGGTAAAGTGG+AGG | + | chr4.4:73485036-73485055 | MS.gene48793:CDS | 35.0% |
| !!! | GTTGTGGTCATTTGTTTTGT+TGG | + | chr4.4:73485125-73485144 | MS.gene48793:CDS | 35.0% |
| ACATGCAACAACAGGATATC+TGG | - | chr4.4:73487220-73487239 | None:intergenic | 40.0% | |
| ACCACACCTGATAGAAACAA+TGG | + | chr4.4:73485457-73485476 | MS.gene48793:CDS | 40.0% | |
| AGAAGAAGAAGATGCTCCTT+GGG | - | chr4.4:73485359-73485378 | None:intergenic | 40.0% | |
| AGGCTCAGAAATTCAGACAA+CGG | + | chr4.4:73487342-73487361 | MS.gene48793:CDS | 40.0% | |
| AGTATGCATGCATGTAAACG+AGG | - | chr4.4:73486020-73486039 | None:intergenic | 40.0% | |
| ATTGGTTATCTGAATCCGAG+AGG | - | chr4.4:73484861-73484880 | None:intergenic | 40.0% | |
| CAGATGGAAATGAAAGAAGC+CGG | + | chr4.4:73485271-73485290 | MS.gene48793:CDS | 40.0% | |
| CGCAATCTTCTTCTTCTTCT+TGG | - | chr4.4:73485949-73485968 | None:intergenic | 40.0% | |
| CTATCAGGTGTGGTACTATT+AGG | - | chr4.4:73485451-73485470 | None:intergenic | 40.0% | |
| CTCTCGAAGTAATTGCTTCA+AGG | - | chr4.4:73484808-73484827 | None:intergenic | 40.0% | |
| CTTCTACCTCTAGATGAAGA+AGG | - | chr4.4:73485892-73485911 | None:intergenic | 40.0% | |
| CTTCTTCTACCGTTTGATGA+AGG | - | chr4.4:73487397-73487416 | None:intergenic | 40.0% | |
| GGAATGTCCTGTTTGTAAAG+GGG | + | chr4.4:73485189-73485208 | MS.gene48793:CDS | 40.0% | |
| GGGATGGAAGAGATTGATAA+TGG | + | chr4.4:73485025-73485044 | MS.gene48793:CDS | 40.0% | |
| GTATGCGTATTCGAAAGCAA+AGG | + | chr4.4:73485168-73485187 | MS.gene48793:CDS | 40.0% | |
| GTTCTCCAAATCCACCAATT+CGG | - | chr4.4:73485411-73485430 | None:intergenic | 40.0% | |
| TAAAGGGGAGGTAACTGAAT+CGG | + | chr4.4:73485204-73485223 | MS.gene48793:CDS | 40.0% | |
| TAGAAGAAGAAGATGCTCCT+TGG | - | chr4.4:73485360-73485379 | None:intergenic | 40.0% | |
| TATGAAACCGCCGAATACTT+TGG | - | chr4.4:73485387-73485406 | None:intergenic | 40.0% | |
| TCCCTATTACATGCAACAAC+AGG | - | chr4.4:73487228-73487247 | None:intergenic | 40.0% | |
| TCTTCATCTAGAGGTAGAAG+AGG | + | chr4.4:73485892-73485911 | MS.gene48793:intron | 40.0% | |
| TGACCACAACATGTCAAAAC+AGG | - | chr4.4:73485115-73485134 | None:intergenic | 40.0% | |
| TGATTTGAATCAGGAGCCTT+TGG | + | chr4.4:73484691-73484710 | MS.gene48793:CDS | 40.0% | |
| TGCAGTTTCTCCTGTAACAT+TGG | - | chr4.4:73484879-73484898 | None:intergenic | 40.0% | |
| TGTCTCACTTGAGTAAGTTG+AGG | + | chr4.4:73486450-73486469 | MS.gene48793:intron | 40.0% | |
| TTGCTTCAAGGTGTGTGATT+CGG | - | chr4.4:73484796-73484815 | None:intergenic | 40.0% | |
| ! | CTATTGTCCAAAGTATTCGG+CGG | + | chr4.4:73485377-73485396 | MS.gene48793:CDS | 40.0% |
| ! | GGGATAGTTGAAAGTGTGAA+AGG | + | chr4.4:73484962-73484981 | MS.gene48793:CDS | 40.0% |
| ! | TAGTTGAAAGTGTGAAAGGG+GGG | + | chr4.4:73484966-73484985 | MS.gene48793:CDS | 40.0% |
| !! | ACCATTGTTTCTATCAGGTG+TGG | - | chr4.4:73485461-73485480 | None:intergenic | 40.0% |
| !! | CATAACCGAATTGGTGGATT+TGG | + | chr4.4:73485403-73485422 | MS.gene48793:CDS | 40.0% |
| !! | GAGTTGAGAGTATTAGACAG+AGG | + | chr4.4:73485326-73485345 | MS.gene48793:CDS | 40.0% |
| !! | GGCAAACCATTGTTTCTATC+AGG | - | chr4.4:73485466-73485485 | None:intergenic | 40.0% |
| !! | GTTGATAATGTTGCTGTTGC+AGG | + | chr4.4:73485817-73485836 | MS.gene48793:CDS | 40.0% |
| !!! | GATCCTGTTTTGACATGTTG+TGG | + | chr4.4:73485109-73485128 | MS.gene48793:CDS | 40.0% |
| AAAGGGGAGGTAACTGAATC+GGG | + | chr4.4:73485205-73485224 | MS.gene48793:CDS | 45.0% | |
| AAAGTGTGAAAGGGGGGAAA+AGG | + | chr4.4:73484972-73484991 | MS.gene48793:CDS | 45.0% | |
| AAGCAATTACTTCGAGAGCG+AGG | + | chr4.4:73484810-73484829 | MS.gene48793:CDS | 45.0% | |
| ACCACAAACTGGAGTCAATG+AGG | - | chr4.4:73486585-73486604 | None:intergenic | 45.0% | |
| AGCAGCTGTAGAATCAGTCA+TGG | - | chr4.4:73487272-73487291 | None:intergenic | 45.0% | |
| ATCGTCATACGAGTTGCTGT+CGG | - | chr4.4:73486976-73486995 | None:intergenic | 45.0% | |
| ATCTGAATCCGAGAGGAGTT+CGG | - | chr4.4:73484854-73484873 | None:intergenic | 45.0% | |
| ATGTCCTGTTTGTAAAGGGG+AGG | + | chr4.4:73485192-73485211 | MS.gene48793:CDS | 45.0% | |
| ATGTTCAAGGCGAAGAATGG+AGG | + | chr4.4:73484909-73484928 | MS.gene48793:CDS | 45.0% | |
| CGGTTTCATAACCGAATTGG+TGG | + | chr4.4:73485397-73485416 | MS.gene48793:CDS | 45.0% | |
| CTAGACCCTTCTTCATCTAG+AGG | + | chr4.4:73485883-73485902 | MS.gene48793:intron | 45.0% | |
| CTGTTAGGCCCTTCATCAAA+CGG | + | chr4.4:73487385-73487404 | MS.gene48793:CDS | 45.0% | |
| GACAATTAGCAGGCCCTATT+TGG | - | chr4.4:73486401-73486420 | None:intergenic | 45.0% | |
| GTAAAGTGGAGGAGAGTAGT+GGG | + | chr4.4:73485047-73485066 | MS.gene48793:CDS | 45.0% | |
| GTGATGTTCAAGGCGAAGAA+TGG | + | chr4.4:73484906-73484925 | MS.gene48793:CDS | 45.0% | |
| GTGGTTCTCAACAGGTTTCA+AGG | + | chr4.4:73485524-73485543 | MS.gene48793:CDS | 45.0% | |
| GTTACCTCCCCTTTACAAAC+AGG | - | chr4.4:73485199-73485218 | None:intergenic | 45.0% | |
| GTTTCAAGGTTGCTAGAGCA+AGG | + | chr4.4:73485538-73485557 | MS.gene48793:CDS | 45.0% | |
| TGAACATGGTGGTTCTCAAC+AGG | + | chr4.4:73485516-73485535 | MS.gene48793:CDS | 45.0% | |
| TGTTCAAGGCGAAGAATGGA+GGG | + | chr4.4:73484910-73484929 | MS.gene48793:CDS | 45.0% | |
| TTGTGCCAATACAGAAGGAG+TGG | - | chr4.4:73486951-73486970 | None:intergenic | 45.0% | |
| ! | ACTCCTTCTGTATTGGCACA+AGG | + | chr4.4:73486950-73486969 | MS.gene48793:intron | 45.0% |
| !! | GATAGCAAAAGCTCTAGGGA+TGG | + | chr4.4:73485009-73485028 | MS.gene48793:CDS | 45.0% |
| !! | TCATTGACTCCAGTTTGTGG+TGG | + | chr4.4:73486584-73486603 | MS.gene48793:intron | 45.0% |
| AACGATGCTGATCAGGAGGA+AGG | + | chr4.4:73484941-73484960 | MS.gene48793:CDS | 50.0% | |
| ACAAACCAGTCAGAGAGTCG+TGG | + | chr4.4:73485727-73485746 | MS.gene48793:CDS | 50.0% | |
| ACAGGAGAAACTGCAACAGC+AGG | + | chr4.4:73484884-73484903 | MS.gene48793:CDS | 50.0% | |
| ACGATGCTGATCAGGAGGAA+GGG | + | chr4.4:73484942-73484961 | MS.gene48793:CDS | 50.0% | |
| AGACAGAGGTTGCTAACCCA+AGG | + | chr4.4:73485340-73485359 | MS.gene48793:CDS | 50.0% | |
| AGCTGCTGCAGCTACAGAAT+TGG | - | chr4.4:73485773-73485792 | None:intergenic | 50.0% | |
| CGGCGGTTTCATAACCGAAT+TGG | + | chr4.4:73485394-73485413 | MS.gene48793:CDS | 50.0% | |
| CTCTCAACTCTAGGTGCCTT+AGG | - | chr4.4:73485316-73485335 | None:intergenic | 50.0% | |
| GCAACAGCAGGTGATGTTCA+AGG | + | chr4.4:73484896-73484915 | MS.gene48793:CDS | 50.0% | |
| GGTAAAGTGGAGGAGAGTAG+TGG | + | chr4.4:73485046-73485065 | MS.gene48793:CDS | 50.0% | |
| TATGGACATGGAAATGGCGG+CGG | + | chr4.4:73485241-73485260 | MS.gene48793:CDS | 50.0% | |
| TCGAGGAGGAACTCTCAAAC+CGG | - | chr4.4:73485293-73485312 | None:intergenic | 50.0% | |
| TGACTCCAGTTTGTGGTGGT+GGG | + | chr4.4:73486588-73486607 | MS.gene48793:intron | 50.0% | |
| TTGACTCCAGTTTGTGGTGG+TGG | + | chr4.4:73486587-73486606 | MS.gene48793:intron | 50.0% | |
| !! | GCCTCATTGACTCCAGTTTG+TGG | + | chr4.4:73486581-73486600 | MS.gene48793:intron | 50.0% |
| ACTCTAGGTGCCTTAGGTCG+AGG | - | chr4.4:73485310-73485329 | None:intergenic | 55.0% | |
| ATGACCCCACCACCACAAAC+TGG | - | chr4.4:73486596-73486615 | None:intergenic | 55.0% | |
| CTTGACCACGACTCTCTGAC+TGG | - | chr4.4:73485735-73485754 | None:intergenic | 55.0% | |
| GAGAGTTCCTCCTCGACCTA+AGG | + | chr4.4:73485297-73485316 | MS.gene48793:CDS | 55.0% | |
| GCGAAACGATGCTGATCAGG+AGG | + | chr4.4:73484937-73484956 | MS.gene48793:CDS | 55.0% | |
| GGAGCGAAACGATGCTGATC+AGG | + | chr4.4:73484934-73484953 | MS.gene48793:CDS | 55.0% | |
| TCAAGGCGAAGAATGGAGGG+AGG | + | chr4.4:73484913-73484932 | MS.gene48793:CDS | 55.0% | |
| TGAATCCGAGAGGAGTTCGG+CGG | - | chr4.4:73484851-73484870 | None:intergenic | 55.0% | |
| ! | CGGCCTTGTGCCAATACAGA+AGG | - | chr4.4:73486956-73486975 | None:intergenic | 55.0% |
| ! | GACTCCAGTTTGTGGTGGTG+GGG | + | chr4.4:73486589-73486608 | MS.gene48793:intron | 55.0% |
| !! | AGTTTGTGGTGGTGGGGTCA+TGG | + | chr4.4:73486595-73486614 | MS.gene48793:intron | 55.0% |
| CTAGGTGCCTTAGGTCGAGG+AGG | - | chr4.4:73485307-73485326 | None:intergenic | 60.0% | |
| GTCTGCGTGCGAGACTGAAC+AGG | - | chr4.4:73485487-73485506 | None:intergenic | 60.0% | |
| TGGCGGCGGTGATTGTCAGA+TGG | + | chr4.4:73485255-73485274 | MS.gene48793:CDS | 60.0% | |
| CTTCGAGAGCGAGGCAGCGT+CGG | + | chr4.4:73484819-73484838 | MS.gene48793:CDS | 65.0% | |
| GGTTGCCGCCGAACTCCTCT+CGG | + | chr4.4:73484843-73484862 | MS.gene48793:CDS | 65.0% | |
| TTCGAGAGCGAGGCAGCGTC+GGG | + | chr4.4:73484820-73484839 | MS.gene48793:CDS | 65.0% | |
| TCGAGAGCGAGGCAGCGTCG+GGG | + | chr4.4:73484821-73484840 | MS.gene48793:CDS | 70.0% | |
| ! | CGAGAGCGAGGCAGCGTCGG+GGG | + | chr4.4:73484822-73484841 | MS.gene48793:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 73484683 | 73487468 | 73484683 | ID=MS.gene48793 |
| chr4.4 | mRNA | 73484683 | 73487468 | 73484683 | ID=MS.gene48793.t1;Parent=MS.gene48793 |
| chr4.4 | exon | 73484683 | 73485873 | 73484683 | ID=MS.gene48793.t1.exon1;Parent=MS.gene48793.t1 |
| chr4.4 | CDS | 73484683 | 73485873 | 73484683 | ID=cds.MS.gene48793.t1;Parent=MS.gene48793.t1 |
| chr4.4 | exon | 73485905 | 73485983 | 73485905 | ID=MS.gene48793.t1.exon2;Parent=MS.gene48793.t1 |
| chr4.4 | CDS | 73485905 | 73485983 | 73485905 | ID=cds.MS.gene48793.t1;Parent=MS.gene48793.t1 |
| chr4.4 | exon | 73487245 | 73487468 | 73487245 | ID=MS.gene48793.t1.exon3;Parent=MS.gene48793.t1 |
| chr4.4 | CDS | 73487245 | 73487468 | 73487245 | ID=cds.MS.gene48793.t1;Parent=MS.gene48793.t1 |
| Gene Sequence |
| Protein sequence |
