Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055464.t1 | XP_003610817.1 | 97.5 | 322 | 8 | 0 | 1 | 322 | 1 | 322 | 8.60E-175 | 622.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055464.t1 | G7K556 | 97.5 | 322 | 8 | 0 | 1 | 322 | 1 | 322 | 6.2e-175 | 622.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene055464 | 0.842277 | 2.85E-58 | -1.69E-46 |
| MS.gene049404 | MS.gene055464 | 0.841335 | 5.06E-58 | -1.69E-46 |
| MS.gene050559 | MS.gene055464 | 0.817381 | 3.40E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene055464 | 0.820054 | 8.40E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene055464 | 0.812103 | 5.02E-51 | -1.69E-46 |
| MS.gene052037 | MS.gene055464 | 0.805299 | 1.43E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene055464 | 0.829469 | 5.06E-55 | -1.69E-46 |
| MS.gene055463 | MS.gene055464 | 0.812964 | 3.25E-51 | -1.69E-46 |
| MS.gene055464 | MS.gene056050 | 0.810971 | 8.84E-51 | -1.69E-46 |
| MS.gene055464 | MS.gene056252 | 0.815436 | 9.25E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene05686 | 0.811624 | 6.38E-51 | -1.69E-46 |
| MS.gene055464 | MS.gene058009 | 0.813765 | 2.17E-51 | -1.69E-46 |
| MS.gene055464 | MS.gene058010 | 0.818269 | 2.14E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene058088 | 0.835415 | 1.70E-56 | -1.69E-46 |
| MS.gene055464 | MS.gene058781 | 0.828486 | 8.75E-55 | -1.69E-46 |
| MS.gene055464 | MS.gene058783 | 0.826112 | 3.24E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene058979 | 0.800623 | 1.32E-48 | -1.69E-46 |
| MS.gene055464 | MS.gene060322 | 0.801326 | 9.49E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene062042 | 0.824457 | 7.99E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene063288 | 0.805996 | 1.02E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene06372 | 0.819809 | 9.55E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene065904 | 0.80987 | 1.53E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene067173 | 0.80434 | 2.26E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene068526 | 0.807678 | 4.49E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene068924 | 0.831901 | 1.28E-55 | -1.69E-46 |
| MS.gene055464 | MS.gene070301 | 0.816735 | 4.74E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene070616 | 0.803561 | 3.29E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene072116 | 0.80481 | 1.81E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene07294 | 0.818292 | 2.12E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene073008 | 0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene055464 | MS.gene073853 | 0.804097 | 2.54E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene074604 | 0.802934 | 4.43E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene07696 | 0.825054 | 5.78E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene07876 | 0.800132 | 1.66E-48 | -1.69E-46 |
| MS.gene055464 | MS.gene08979 | 0.807848 | 4.14E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene20809 | 0.839771 | 1.30E-57 | -1.69E-46 |
| MS.gene055464 | MS.gene20859 | 0.808007 | 3.83E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene22144 | 0.801285 | 9.68E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene22609 | 0.805294 | 1.43E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene24067 | 0.818385 | 2.02E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene24429 | 0.827362 | 1.63E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene25978 | 0.846909 | 1.61E-59 | -1.69E-46 |
| MS.gene055464 | MS.gene29920 | 0.805211 | 1.49E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene29921 | 0.801626 | 8.24E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene31802 | 0.808118 | 3.62E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene32361 | 0.807652 | 4.55E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene33624 | 0.829294 | 5.58E-55 | -1.69E-46 |
| MS.gene055464 | MS.gene35324 | 0.810463 | 1.14E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene35375 | 0.800401 | 1.47E-48 | -1.69E-46 |
| MS.gene055464 | MS.gene35611 | 0.820287 | 7.43E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene35858 | 0.822101 | 2.84E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene36569 | 0.818356 | 2.05E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene39882 | 0.835006 | 2.16E-56 | -1.69E-46 |
| MS.gene055464 | MS.gene40068 | 0.827361 | 1.63E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene40079 | 0.826029 | 3.39E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene40157 | 0.835947 | 1.25E-56 | -1.69E-46 |
| MS.gene055464 | MS.gene43424 | 0.813695 | 2.25E-51 | -1.69E-46 |
| MS.gene055464 | MS.gene44256 | 0.808093 | 3.67E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene44356 | 0.807373 | 5.22E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene44364 | 0.824058 | 9.92E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene44366 | 0.812408 | 4.30E-51 | -1.69E-46 |
| MS.gene055464 | MS.gene47868 | 0.809303 | 2.02E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene48223 | 0.804978 | 1.67E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene48793 | 0.800648 | 1.31E-48 | -1.69E-46 |
| MS.gene055464 | MS.gene49320 | 0.831808 | 1.35E-55 | -1.69E-46 |
| MS.gene055464 | MS.gene49793 | 0.807289 | 5.44E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene50775 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene055464 | MS.gene52357 | 0.827459 | 1.55E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene56646 | 0.819585 | 1.08E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene58248 | 0.820017 | 8.57E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene58686 | 0.804369 | 2.23E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene58905 | 0.821731 | 3.46E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene59012 | 0.807586 | 4.70E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene64349 | 0.801389 | 9.21E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene64772 | 0.820104 | 8.18E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene66700 | 0.821361 | 4.21E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene66990 | 0.818335 | 2.07E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene67631 | 0.805191 | 1.50E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene67662 | 0.811675 | 6.22E-51 | -1.69E-46 |
| MS.gene055464 | MS.gene68663 | 0.815981 | 7.00E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene71534 | 0.817613 | 3.01E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene71945 | 0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene72400 | 0.80048 | 1.41E-48 | -1.69E-46 |
| MS.gene055464 | MS.gene74758 | 0.81509 | 1.10E-51 | -1.69E-46 |
| MS.gene055464 | MS.gene74904 | 0.824891 | 6.31E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene75437 | 0.830155 | 3.44E-55 | -1.69E-46 |
| MS.gene055464 | MS.gene76244 | 0.820819 | 5.61E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene80704 | 0.804126 | 2.51E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene81900 | 0.801853 | 7.40E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene82699 | 0.837158 | 6.13E-57 | -1.69E-46 |
| MS.gene055464 | MS.gene84454 | 0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene87954 | 0.801777 | 7.67E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene88171 | 0.82021 | 7.74E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene93764 | 0.838354 | 3.02E-57 | -1.69E-46 |
| MS.gene055464 | MS.gene94679 | 0.803136 | 4.03E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene97017 | 0.827064 | 1.92E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene97490 | 0.822939 | 1.81E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene97784 | 0.843296 | 1.53E-58 | -1.69E-46 |
| MS.gene055464 | MS.gene98394 | 0.822032 | 2.94E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene98611 | 0.823963 | 1.04E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055464.t1 | MTR_5g007360 | 97.516 | 322 | 8 | 0 | 1 | 322 | 1 | 322 | 0.0 | 641 |
| MS.gene055464.t1 | MTR_3g091660 | 84.615 | 91 | 13 | 1 | 62 | 151 | 42 | 132 | 5.03e-48 | 158 |
| MS.gene055464.t1 | MTR_3g091670 | 78.333 | 60 | 13 | 0 | 263 | 322 | 6 | 65 | 1.91e-26 | 99.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055464.t1 | AT1G65020 | 64.309 | 311 | 108 | 2 | 1 | 311 | 1 | 308 | 1.21e-143 | 408 |
Find 72 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGAGTTCCTTGAATTTA+AGG | 0.162942 | 5.1:+1871549 | MS.gene055464:CDS |
| GTCCAAACATGCTTGTCTTT+TGG | 0.226912 | 5.1:-1871636 | None:intergenic |
| TCCTTAGCACAGCTCCGATA+TGG | 0.248467 | 5.1:+1870038 | MS.gene055464:CDS |
| TACTTCCAAATCCTAAATTA+TGG | 0.275004 | 5.1:+1869392 | MS.gene055464:CDS |
| AAGTACTGAGATCATCTTTC+AGG | 0.289690 | 5.1:+1872296 | MS.gene055464:CDS |
| ACATACCATAATTTAGGATT+TGG | 0.298779 | 5.1:-1869397 | None:intergenic |
| GAAGTATAACTTTACAAGTT+AGG | 0.321243 | 5.1:-1869375 | None:intergenic |
| CTCTGGTGCTGATGCTCCCT+TGG | 0.331844 | 5.1:-1872250 | None:intergenic |
| GAGAGCACACTCTTTGTTCC+GGG | 0.351339 | 5.1:-1869941 | None:intergenic |
| TTACAAGTTAGGAATCCTTT+AGG | 0.352898 | 5.1:-1869364 | None:intergenic |
| TTCTCTTCTCCGTAGCTAAC+AGG | 0.353170 | 5.1:+1868047 | MS.gene055464:CDS |
| ATCCAAAAGACAAGCATGTT+TGG | 0.358398 | 5.1:+1871634 | MS.gene055464:CDS |
| AGAGAGCACACTCTTTGTTC+CGG | 0.360940 | 5.1:-1869942 | None:intergenic |
| CCTCCTTGCCCTTAAATTCA+AGG | 0.368520 | 5.1:-1871558 | None:intergenic |
| AAGAGGTTCCTTACAGGATC+AGG | 0.374138 | 5.1:-1869027 | None:intergenic |
| GGAGAGTTCCTTGAATTTAA+GGG | 0.377759 | 5.1:+1871550 | MS.gene055464:CDS |
| TCAGTTGCACCAACTGTTCA+TGG | 0.383310 | 5.1:-1869916 | None:intergenic |
| CAAAGAGTGTGCTCTCTAGC+TGG | 0.413619 | 5.1:+1869948 | MS.gene055464:CDS |
| AAAGGCAGCAAGTATGTATT+GGG | 0.428495 | 5.1:+1871529 | MS.gene055464:CDS |
| GTAAAGAATACCTTTCTTAG+TGG | 0.432856 | 5.1:+1869971 | MS.gene055464:CDS |
| GAAAGGCAGCAAGTATGTAT+TGG | 0.437053 | 5.1:+1871528 | MS.gene055464:CDS |
| CAGAGAGCTACTAGTGATAT+CGG | 0.442531 | 5.1:+1868918 | MS.gene055464:intron |
| CAGTTCAAGGGGATGGTAGT+TGG | 0.442677 | 5.1:+1868965 | MS.gene055464:CDS |
| ATCTTGTTCTCCTCACTAAA+CGG | 0.444438 | 5.1:+1868287 | MS.gene055464:CDS |
| TACAAAACTTGAAGCGTAGA+AGG | 0.445109 | 5.1:-1872207 | None:intergenic |
| AGTTCAAGGGGATGGTAGTT+GGG | 0.450991 | 5.1:+1868966 | MS.gene055464:CDS |
| AGAGGAGTTGTTCTACCTAA+AGG | 0.458571 | 5.1:+1869349 | MS.gene055464:CDS |
| CCTTAGCACAGCTCCGATAT+GGG | 0.458981 | 5.1:+1870039 | MS.gene055464:CDS |
| TGTTCATGGGTAATAACTTC+AGG | 0.467363 | 5.1:-1869902 | None:intergenic |
| AACTCCTCTTTGTTCAAGAT+AGG | 0.470713 | 5.1:-1869335 | None:intergenic |
| TGAATTTAAGGGCAAGGAGG+GGG | 0.482520 | 5.1:+1871561 | MS.gene055464:CDS |
| ATCATTCTTCCCACTAAGAA+AGG | 0.488207 | 5.1:-1869981 | None:intergenic |
| CTTGAATTTAAGGGCAAGGA+GGG | 0.496833 | 5.1:+1871559 | MS.gene055464:CDS |
| GTAACTAACCTATCCCATAT+CGG | 0.509751 | 5.1:-1870052 | None:intergenic |
| AGTGAGGAGAACAAGATCAA+TGG | 0.509852 | 5.1:-1868281 | None:intergenic |
| TAAAGAATACCTTTCTTAGT+GGG | 0.519984 | 5.1:+1869972 | MS.gene055464:CDS |
| GATATCGGTGAAGAACTTCT+CGG | 0.527229 | 5.1:+1868933 | MS.gene055464:CDS |
| TTGAATTTAAGGGCAAGGAG+GGG | 0.528134 | 5.1:+1871560 | MS.gene055464:CDS |
| CTCCCTTGGTTCTGTAGTCA+CGG | 0.532065 | 5.1:-1872236 | None:intergenic |
| GTTCCTTGAATTTAAGGGCA+AGG | 0.535185 | 5.1:+1871555 | MS.gene055464:CDS |
| GGTGAAGCAGAATCAGCATC+AGG | 0.535980 | 5.1:-1868253 | None:intergenic |
| GTTGGAAGAAGTAAGAAAGC+AGG | 0.540992 | 5.1:+1869297 | MS.gene055464:intron |
| ACGGTCACTTCGTTCCACTC+TGG | 0.541796 | 5.1:-1872267 | None:intergenic |
| ACTGAGATCATCTTTCAGGT+TGG | 0.544325 | 5.1:+1872300 | MS.gene055464:CDS |
| TGGGAAATCACTAGCAGGAA+TGG | 0.544917 | 5.1:-1869879 | None:intergenic |
| CATATTAGAAGATCAAAAGT+TGG | 0.546113 | 5.1:+1871601 | MS.gene055464:CDS |
| ATATCGGTGAAGAACTTCTC+GGG | 0.548520 | 5.1:+1868934 | MS.gene055464:CDS |
| AAGACAAGCATGTTTGGACT+AGG | 0.550639 | 5.1:+1871640 | MS.gene055464:CDS |
| CAGTTGGTGCAACTGAAGCC+CGG | 0.558138 | 5.1:+1869923 | MS.gene055464:CDS |
| CAGTTGCACCAACTGTTCAT+GGG | 0.560744 | 5.1:-1869915 | None:intergenic |
| AAAGAGTGTGCTCTCTAGCT+GGG | 0.564254 | 5.1:+1869949 | MS.gene055464:CDS |
| CCCATATCGGAGCTGTGCTA+AGG | 0.568778 | 5.1:-1870039 | None:intergenic |
| ATCAAACCACAGATAATCGC+AGG | 0.569955 | 5.1:-1867953 | None:intergenic |
| TCATGGGTAATAACTTCAGG+TGG | 0.572116 | 5.1:-1869899 | None:intergenic |
| AAAATAGAACCTGTTAGCTA+CGG | 0.572491 | 5.1:-1868056 | None:intergenic |
| AGTTGGGCCTGTGAAAAGCC+AGG | 0.575563 | 5.1:+1868982 | MS.gene055464:CDS |
| AGAGGTTCCTTACAGGATCA+GGG | 0.579456 | 5.1:-1869026 | None:intergenic |
| AGAACAAGATCAATGGTTTG+TGG | 0.580661 | 5.1:-1868274 | None:intergenic |
| CCTTGAATTTAAGGGCAAGG+AGG | 0.585033 | 5.1:+1871558 | MS.gene055464:CDS |
| GCACAGCTCCGATATGGGAT+AGG | 0.585641 | 5.1:+1870044 | MS.gene055464:CDS |
| AGTTATTACCCATGAACAGT+TGG | 0.586406 | 5.1:+1869907 | MS.gene055464:CDS |
| TCCTTACAGGATCAGGGTGA+CGG | 0.588996 | 5.1:-1869020 | None:intergenic |
| TCAGGTGGGAAATCACTAGC+AGG | 0.590475 | 5.1:-1869884 | None:intergenic |
| GCTTGCAGGTTGGAACTGAA+AGG | 0.595661 | 5.1:+1871511 | MS.gene055464:intron |
| TTCCGTGACTACAGAACCAA+GGG | 0.621677 | 5.1:+1872234 | MS.gene055464:CDS |
| ATGTGGCCTGCGATTATCTG+TGG | 0.622381 | 5.1:+1867947 | MS.gene055464:CDS |
| TTTGTTCAAGATAGGACTCG+AGG | 0.627057 | 5.1:-1869327 | None:intergenic |
| CATGGGTAATAACTTCAGGT+GGG | 0.643301 | 5.1:-1869898 | None:intergenic |
| GAGTCCTATCTTGAACAAAG+AGG | 0.656933 | 5.1:+1869331 | MS.gene055464:CDS |
| TTTCCGTGACTACAGAACCA+AGG | 0.679639 | 5.1:+1872233 | MS.gene055464:CDS |
| AGGGAGCATCAGCACCAGAG+TGG | 0.687214 | 5.1:+1872253 | MS.gene055464:CDS |
| AGCTACGGAGAAGAGAACAG+TGG | 0.755552 | 5.1:-1868041 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATAATAACAAAATTTAAT+GGG | + | chr5.1:1871710-1871729 | MS.gene055464:intron | 10.0% |
| !! | AAAATAATTGAAATCATGAA+AGG | - | chr5.1:1868103-1868122 | None:intergenic | 15.0% |
| !! | AAATAATATTGATGTTTCAT+TGG | - | chr5.1:1870856-1870875 | None:intergenic | 15.0% |
| !! | AAGAACTAATTAAAAAAGAA+TGG | - | chr5.1:1869608-1869627 | None:intergenic | 15.0% |
| !! | AGTATTAAATAAAACATTGA+GGG | - | chr5.1:1871794-1871813 | None:intergenic | 15.0% |
| !! | ATTGCATTCAAATTATAATA+AGG | + | chr5.1:1868524-1868543 | MS.gene055464:intron | 15.0% |
| !! | GCTATAATAACAAAATTTAA+TGG | + | chr5.1:1871709-1871728 | MS.gene055464:intron | 15.0% |
| !! | TAAATAGTTAAGTGTATAAT+AGG | - | chr5.1:1870881-1870900 | None:intergenic | 15.0% |
| !! | TAGTATTAAATAAAACATTG+AGG | - | chr5.1:1871795-1871814 | None:intergenic | 15.0% |
| !! | TTGCATTCAAATTATAATAA+GGG | + | chr5.1:1868525-1868544 | MS.gene055464:intron | 15.0% |
| !!! | ACTTTAAAATTTTCCAAATT+TGG | + | chr5.1:1869533-1869552 | MS.gene055464:intron | 15.0% |
| !!! | ATAACTCAATTCTTTAATTT+CGG | + | chr5.1:1870969-1870988 | MS.gene055464:intron | 15.0% |
| !!! | ATTCTTTTTTAATTAGTTCT+TGG | + | chr5.1:1869607-1869626 | MS.gene055464:intron | 15.0% |
| !!! | TATTTAATATGACCAAATTT+TGG | + | chr5.1:1871463-1871482 | MS.gene055464:intron | 15.0% |
| !!! | TTTTCAATAACATTAATGAA+GGG | + | chr5.1:1870934-1870953 | MS.gene055464:intron | 15.0% |
| !! | ACATTCATAATTTATTCAAG+AGG | - | chr5.1:1869047-1869066 | None:intergenic | 20.0% |
| !! | ATCTTATTCAAACATAGATT+AGG | - | chr5.1:1870434-1870453 | None:intergenic | 20.0% |
| !! | ATTACTGTCTAAACTATAAT+TGG | + | chr5.1:1869647-1869666 | MS.gene055464:intron | 20.0% |
| !! | ATTAGAAAGATAAGAACAAA+TGG | - | chr5.1:1870077-1870096 | None:intergenic | 20.0% |
| !! | ATTGAATTGAATTGAATTGA+AGG | + | chr5.1:1868137-1868156 | MS.gene055464:intron | 20.0% |
| !! | GTTAATGAATGATAAATTTG+TGG | + | chr5.1:1868846-1868865 | MS.gene055464:intron | 20.0% |
| !! | TATTATTCATTTATTGTTGC+AGG | + | chr5.1:1868185-1868204 | MS.gene055464:intron | 20.0% |
| !! | TCAAAAACATACCATAATTT+AGG | - | chr5.1:1869406-1869425 | None:intergenic | 20.0% |
| !! | TCTATTATATAACTTAGAGA+AGG | - | chr5.1:1871976-1871995 | None:intergenic | 20.0% |
| !! | TTTAACCAACAATATGAAAA+AGG | - | chr5.1:1870678-1870697 | None:intergenic | 20.0% |
| !!! | AAAAATAATACCTTTTAGTG+AGG | - | chr5.1:1868447-1868466 | None:intergenic | 20.0% |
| !!! | AATGGATTATACATATGAAT+AGG | - | chr5.1:1869590-1869609 | None:intergenic | 20.0% |
| !!! | GAATTGTGTTGTTAATAAAT+TGG | + | chr5.1:1869669-1869688 | MS.gene055464:intron | 20.0% |
| !!! | GTTTTCAATAACATTAATGA+AGG | + | chr5.1:1870933-1870952 | MS.gene055464:intron | 20.0% |
| !!! | TAGTACTATTGATTACTAAA+AGG | + | chr5.1:1870752-1870771 | MS.gene055464:intron | 20.0% |
| !!! | TGTTTGTTAAATCATATGAA+CGG | + | chr5.1:1869156-1869175 | MS.gene055464:intron | 20.0% |
| !!! | TTATGATGTAAAAAAAGCAT+TGG | + | chr5.1:1869744-1869763 | MS.gene055464:intron | 20.0% |
| !!! | TTTTCATATTGTTGGTTAAA+GGG | + | chr5.1:1870678-1870697 | MS.gene055464:intron | 20.0% |
| !!! | TTTTTCATATTGTTGGTTAA+AGG | + | chr5.1:1870677-1870696 | MS.gene055464:intron | 20.0% |
| !!! | TTTTTCCTTTTTCATATTGT+TGG | + | chr5.1:1870670-1870689 | MS.gene055464:intron | 20.0% |
| !!! | TTTTTTTACTCTTCTGATTA+GGG | + | chr5.1:1868788-1868807 | MS.gene055464:intron | 20.0% |
| ! | AAAAATAATACCGTTTAGTG+AGG | - | chr5.1:1868300-1868319 | None:intergenic | 25.0% |
| ! | AAAATAATCAAACCGTGTAT+TGG | - | chr5.1:1869506-1869525 | None:intergenic | 25.0% |
| ! | AAACTTTCTGCAATCATATT+TGG | + | chr5.1:1870114-1870133 | MS.gene055464:intron | 25.0% |
| ! | AATATCTGTTGTAACCAAAA+TGG | - | chr5.1:1871870-1871889 | None:intergenic | 25.0% |
| ! | ACTAACAAAAAAGAGAAACA+TGG | - | chr5.1:1868663-1868682 | None:intergenic | 25.0% |
| ! | ATCAATCCATTTCTGAATAT+TGG | + | chr5.1:1870202-1870221 | MS.gene055464:intron | 25.0% |
| ! | ATTACATAGCAAATGTTGAT+AGG | + | chr5.1:1870702-1870721 | MS.gene055464:intron | 25.0% |
| ! | ATTTCTTAATCTGTGTGAAA+TGG | + | chr5.1:1871007-1871026 | MS.gene055464:intron | 25.0% |
| ! | CATATTAGAAGATCAAAAGT+TGG | + | chr5.1:1871601-1871620 | MS.gene055464:CDS | 25.0% |
| ! | GAAGTATAACTTTACAAGTT+AGG | - | chr5.1:1869378-1869397 | None:intergenic | 25.0% |
| ! | GATGTTTCTTTAACTAACAT+GGG | + | chr5.1:1872171-1872190 | MS.gene055464:intron | 25.0% |
| ! | GATTAGGAATACTAGTAATT+AGG | - | chr5.1:1870418-1870437 | None:intergenic | 25.0% |
| ! | GTGAGTAAAAAACCAAAATT+TGG | - | chr5.1:1871478-1871497 | None:intergenic | 25.0% |
| ! | TAAAGAATACCTTTCTTAGT+GGG | + | chr5.1:1869972-1869991 | MS.gene055464:CDS | 25.0% |
| ! | TACTTCCAAATCCTAAATTA+TGG | + | chr5.1:1869392-1869411 | MS.gene055464:CDS | 25.0% |
| ! | TATGGAAGAAGTTACTAATT+TGG | - | chr5.1:1869253-1869272 | None:intergenic | 25.0% |
| ! | TCAATATATGAAGCCAAATT+TGG | - | chr5.1:1869549-1869568 | None:intergenic | 25.0% |
| ! | TCTCAAAGCAACTTAAATTT+GGG | - | chr5.1:1870793-1870812 | None:intergenic | 25.0% |
| ! | TGATGTTTCTTTAACTAACA+TGG | + | chr5.1:1872170-1872189 | MS.gene055464:intron | 25.0% |
| ! | TGTAAAGTGACTTACAATTT+GGG | - | chr5.1:1870830-1870849 | None:intergenic | 25.0% |
| ! | TTCTCAAAGCAACTTAAATT+TGG | - | chr5.1:1870794-1870813 | None:intergenic | 25.0% |
| ! | TTGTAAAGTGACTTACAATT+TGG | - | chr5.1:1870831-1870850 | None:intergenic | 25.0% |
| ! | TTGTATTTAGATGCTGTTAA+TGG | + | chr5.1:1870143-1870162 | MS.gene055464:intron | 25.0% |
| !! | AAAAAGTACGATTTGTGTAT+TGG | - | chr5.1:1870564-1870583 | None:intergenic | 25.0% |
| !! | AAACATTTGAGATGCATTAT+AGG | - | chr5.1:1870355-1870374 | None:intergenic | 25.0% |
| !! | AAATTAAGAATTGCTCTAAG+AGG | - | chr5.1:1871116-1871135 | None:intergenic | 25.0% |
| !! | AACATTTGAGATGCATTATA+GGG | - | chr5.1:1870354-1870373 | None:intergenic | 25.0% |
| !! | ACATACCATAATTTAGGATT+TGG | - | chr5.1:1869400-1869419 | None:intergenic | 25.0% |
| !! | ATCTATATTTGAGACAGAAT+TGG | - | chr5.1:1870311-1870330 | None:intergenic | 25.0% |
| !! | ATTTTATAGAAAAGAGTCAC+AGG | - | chr5.1:1872072-1872091 | None:intergenic | 25.0% |
| !! | ATTTTGTAAAAGCTACACTT+TGG | - | chr5.1:1868718-1868737 | None:intergenic | 25.0% |
| !! | GCTTAGATATTTTCCTATTT+GGG | + | chr5.1:1871369-1871388 | MS.gene055464:intron | 25.0% |
| !! | TCTAGTTTCATTGTTTATCT+AGG | - | chr5.1:1870537-1870556 | None:intergenic | 25.0% |
| !! | TGCTTAGATATTTTCCTATT+TGG | + | chr5.1:1871368-1871387 | MS.gene055464:intron | 25.0% |
| !! | TTTCATATTGTTGGTTAAAG+GGG | + | chr5.1:1870679-1870698 | MS.gene055464:intron | 25.0% |
| !!! | ACAAATCGTACTTTTTATTG+GGG | + | chr5.1:1870568-1870587 | MS.gene055464:intron | 25.0% |
| !!! | ACACAAATCGTACTTTTTAT+TGG | + | chr5.1:1870566-1870585 | MS.gene055464:intron | 25.0% |
| !!! | AGGTATTTAACTTGAGATTA+GGG | - | chr5.1:1870517-1870536 | None:intergenic | 25.0% |
| !!! | CACAAATCGTACTTTTTATT+GGG | + | chr5.1:1870567-1870586 | MS.gene055464:intron | 25.0% |
| !!! | CTTCATATATTGACTTGTTA+TGG | + | chr5.1:1869556-1869575 | MS.gene055464:intron | 25.0% |
| !!! | GTTTCTCTTTTTTGTTAGTT+CGG | + | chr5.1:1868664-1868683 | MS.gene055464:intron | 25.0% |
| !!! | GTTTTTTTACTCTTCTGATT+AGG | + | chr5.1:1868787-1868806 | MS.gene055464:intron | 25.0% |
| !!! | TAGATTTTAGAAACTGCTTT+TGG | + | chr5.1:1869132-1869151 | MS.gene055464:intron | 25.0% |
| !!! | TAGGTATTTAACTTGAGATT+AGG | - | chr5.1:1870518-1870537 | None:intergenic | 25.0% |
| !!! | TTTGTTCCTATTTTGTTATG+AGG | + | chr5.1:1869194-1869213 | MS.gene055464:intron | 25.0% |
| !!! | TTTTTTACTCTTCTGATTAG+GGG | + | chr5.1:1868789-1868808 | MS.gene055464:intron | 25.0% |
| AAAATAGAACCTGTTAGCTA+CGG | - | chr5.1:1868059-1868078 | None:intergenic | 30.0% | |
| AAAGCAACTTAAATTTGGGA+TGG | - | chr5.1:1870789-1870808 | None:intergenic | 30.0% | |
| AATGTTCTGATTCTTGATCT+TGG | - | chr5.1:1872003-1872022 | None:intergenic | 30.0% | |
| ACCTTAATCTCAAAAAACAC+TGG | - | chr5.1:1868573-1868592 | None:intergenic | 30.0% | |
| AGAATCAGAACATTGAACAT+TGG | + | chr5.1:1872009-1872028 | MS.gene055464:intron | 30.0% | |
| ATACAGCCTCATAACAAAAT+AGG | - | chr5.1:1869203-1869222 | None:intergenic | 30.0% | |
| ATACTAGTAATTAGGATGTC+TGG | - | chr5.1:1870410-1870429 | None:intergenic | 30.0% | |
| ATCAAGATCTGATTAGACTA+TGG | - | chr5.1:1871847-1871866 | None:intergenic | 30.0% | |
| ATCCATTTCTGAATATTGGT+AGG | + | chr5.1:1870206-1870225 | MS.gene055464:intron | 30.0% | |
| ATCCTACCAATATTCAGAAA+TGG | - | chr5.1:1870211-1870230 | None:intergenic | 30.0% | |
| CAGCAAGTACTTATATTTCA+AGG | - | chr5.1:1869433-1869452 | None:intergenic | 30.0% | |
| CATAAGACAGAGGTAATTAT+CGG | - | chr5.1:1872106-1872125 | None:intergenic | 30.0% | |
| CATTCTGTTATAAAAGGATG+TGG | - | chr5.1:1871242-1871261 | None:intergenic | 30.0% | |
| CTTGAAGTTGAAACAAAGAT+TGG | + | chr5.1:1871746-1871765 | MS.gene055464:intron | 30.0% | |
| GAAAGGATTCAATTCAACAA+CGG | - | chr5.1:1868086-1868105 | None:intergenic | 30.0% | |
| GTAAAGAATACCTTTCTTAG+TGG | + | chr5.1:1869971-1869990 | MS.gene055464:CDS | 30.0% | |
| TACAATCTCAGAACTCTATT+TGG | + | chr5.1:1870249-1870268 | MS.gene055464:intron | 30.0% | |
| TCATAAATACTGCTTGTCAA+TGG | - | chr5.1:1869730-1869749 | None:intergenic | 30.0% | |
| TTAACTAGCAATTGTAACTG+AGG | - | chr5.1:1868831-1868850 | None:intergenic | 30.0% | |
| TTACAAGTTAGGAATCCTTT+AGG | - | chr5.1:1869367-1869386 | None:intergenic | 30.0% | |
| TTCTGAATATTGGTAGGATA+AGG | + | chr5.1:1870212-1870231 | MS.gene055464:intron | 30.0% | |
| TTTACTCACAACAGATTGTT+TGG | + | chr5.1:1871489-1871508 | MS.gene055464:intron | 30.0% | |
| TTTCTCAACTTGTATACAGT+TGG | + | chr5.1:1869279-1869298 | MS.gene055464:intron | 30.0% | |
| ! | AATCAGATCTTGATCCATTT+TGG | + | chr5.1:1871853-1871872 | MS.gene055464:intron | 30.0% |
| ! | ATGGTTTTTGCCACTAATTA+AGG | - | chr5.1:1871828-1871847 | None:intergenic | 30.0% |
| ! | ATTCATGATTTGCCAATACA+CGG | + | chr5.1:1869491-1869510 | MS.gene055464:intron | 30.0% |
| ! | CAAGTTGAGAAAACGAATTA+TGG | - | chr5.1:1869271-1869290 | None:intergenic | 30.0% |
| ! | CAGCTTAAACTTTTTGATCT+TGG | - | chr5.1:1872334-1872353 | None:intergenic | 30.0% |
| ! | GATCTCAGTACTTGATTTTA+CGG | - | chr5.1:1872289-1872308 | None:intergenic | 30.0% |
| ! | GGTCAAAATGACTTGTAATT+CGG | + | chr5.1:1871028-1871047 | MS.gene055464:intron | 30.0% |
| ! | GTCAAAATGACTTGTAATTC+GGG | + | chr5.1:1871029-1871048 | MS.gene055464:intron | 30.0% |
| ! | GTGTAGCTTTTACAAAATCA+TGG | + | chr5.1:1868720-1868739 | MS.gene055464:intron | 30.0% |
| ! | TATATTTGAGACAGAATTGG+AGG | - | chr5.1:1870308-1870327 | None:intergenic | 30.0% |
| ! | TCCTTTTATAACAGAATGTG+TGG | + | chr5.1:1871244-1871263 | MS.gene055464:intron | 30.0% |
| ! | TGGTTTTTGCCACTAATTAA+GGG | - | chr5.1:1871827-1871846 | None:intergenic | 30.0% |
| ! | TTACTCAGTTTTCTTTTGAC+TGG | - | chr5.1:1869784-1869803 | None:intergenic | 30.0% |
| ! | TTATAGGGTTTTCATTCAGT+CGG | - | chr5.1:1870339-1870358 | None:intergenic | 30.0% |
| ! | TTTTTATTGGGGAAATACCT+TGG | + | chr5.1:1870579-1870598 | MS.gene055464:intron | 30.0% |
| !! | TTTTGTTATGAGGCTGTATT+AGG | + | chr5.1:1869204-1869223 | MS.gene055464:intron | 30.0% |
| !!! | CTGCGATGGTTTTTTTTTTT+GGG | + | chr5.1:1869095-1869114 | MS.gene055464:intron | 30.0% |
| !!! | TCCAGTGTTTTTTGAGATTA+AGG | + | chr5.1:1868569-1868588 | MS.gene055464:intron | 30.0% |
| !!! | TGCGATGGTTTTTTTTTTTG+GGG | + | chr5.1:1869096-1869115 | MS.gene055464:intron | 30.0% |
| AAAAGAGTCACAGGTAACTA+GGG | - | chr5.1:1872063-1872082 | None:intergenic | 35.0% | |
| AAAGGCAGCAAGTATGTATT+GGG | + | chr5.1:1871529-1871548 | MS.gene055464:CDS | 35.0% | |
| AACATTGCACCCTACATAAT+AGG | + | chr5.1:1871335-1871354 | MS.gene055464:intron | 35.0% | |
| AACTCCTCTTTGTTCAAGAT+AGG | - | chr5.1:1869338-1869357 | None:intergenic | 35.0% | |
| ACTTTGGATCAGTGTACTAT+CGG | + | chr5.1:1871426-1871445 | MS.gene055464:intron | 35.0% | |
| AGAACAAGATCAATGGTTTG+TGG | - | chr5.1:1868277-1868296 | None:intergenic | 35.0% | |
| AGTTATTACCCATGAACAGT+TGG | + | chr5.1:1869907-1869926 | MS.gene055464:CDS | 35.0% | |
| ATCATTCTTCCCACTAAGAA+AGG | - | chr5.1:1869984-1870003 | None:intergenic | 35.0% | |
| ATCCAAAAGACAAGCATGTT+TGG | + | chr5.1:1871634-1871653 | MS.gene055464:CDS | 35.0% | |
| ATCTTGTTCTCCTCACTAAA+CGG | + | chr5.1:1868287-1868306 | MS.gene055464:CDS | 35.0% | |
| CAACCAAATCCCTTAATTAG+TGG | + | chr5.1:1871815-1871834 | MS.gene055464:intron | 35.0% | |
| CGATAATTACCTCTGTCTTA+TGG | + | chr5.1:1872104-1872123 | MS.gene055464:intron | 35.0% | |
| GCCACACATTCTGTTATAAA+AGG | - | chr5.1:1871248-1871267 | None:intergenic | 35.0% | |
| GGAGAGTTCCTTGAATTTAA+GGG | + | chr5.1:1871550-1871569 | MS.gene055464:CDS | 35.0% | |
| GTAACTAACCTATCCCATAT+CGG | - | chr5.1:1870055-1870074 | None:intergenic | 35.0% | |
| GTGTACTATCGGATAATTGT+TGG | + | chr5.1:1871437-1871456 | MS.gene055464:intron | 35.0% | |
| TACAAAACTTGAAGCGTAGA+AGG | - | chr5.1:1872210-1872229 | None:intergenic | 35.0% | |
| TACATGTGTCTAGACACTAA+CGG | - | chr5.1:1868504-1868523 | None:intergenic | 35.0% | |
| TAGCAATTGTAACTGAGGAT+TGG | - | chr5.1:1868826-1868845 | None:intergenic | 35.0% | |
| TATTAGGTGTGGAAGGAAAT+GGG | + | chr5.1:1869220-1869239 | MS.gene055464:intron | 35.0% | |
| TGTTCATGGGTAATAACTTC+AGG | - | chr5.1:1869905-1869924 | None:intergenic | 35.0% | |
| TTATCTCTTTCCAACACTTC+TGG | + | chr5.1:1868466-1868485 | MS.gene055464:intron | 35.0% | |
| TTATTCAAGAGGTTCCTTAC+AGG | - | chr5.1:1869036-1869055 | None:intergenic | 35.0% | |
| TTCTATCAGAAGTGAAGTGT+CGG | - | chr5.1:1868339-1868358 | None:intergenic | 35.0% | |
| TTGCCACTAATTAAGGGATT+TGG | - | chr5.1:1871821-1871840 | None:intergenic | 35.0% | |
| ! | AACTTGAGATTAGGGTTTTC+TGG | - | chr5.1:1870509-1870528 | None:intergenic | 35.0% |
| ! | CAACTTAAATTTGGGATGGA+GGG | - | chr5.1:1870785-1870804 | None:intergenic | 35.0% |
| ! | CTTGACAACACTTTTGCTTA+GGG | + | chr5.1:1870169-1870188 | MS.gene055464:intron | 35.0% |
| ! | CTTGGCAAAAGGAACATTTT+GGG | + | chr5.1:1870597-1870616 | MS.gene055464:intron | 35.0% |
| ! | TTGACAACACTTTTGCTTAG+GGG | + | chr5.1:1870170-1870189 | MS.gene055464:intron | 35.0% |
| ! | TTGGCAAAAGGAACATTTTG+GGG | + | chr5.1:1870598-1870617 | MS.gene055464:intron | 35.0% |
| ! | TTTGGTGGAAAGGTTTTTGT+GGG | + | chr5.1:1868220-1868239 | MS.gene055464:CDS | 35.0% |
| ! | TTTTGGTGGAAAGGTTTTTG+TGG | + | chr5.1:1868219-1868238 | MS.gene055464:CDS | 35.0% |
| !! | AAAAAAAGCATTGGTCCATC+TGG | + | chr5.1:1869753-1869772 | MS.gene055464:intron | 35.0% |
| !! | AACATTGAACATTGGCTCTA+CGG | + | chr5.1:1872017-1872036 | MS.gene055464:intron | 35.0% |
| !! | AAGAATTGCTCTAAGAGGTT+GGG | - | chr5.1:1871111-1871130 | None:intergenic | 35.0% |
| !! | AAGTACTGAGATCATCTTTC+AGG | + | chr5.1:1872296-1872315 | MS.gene055464:CDS | 35.0% |
| !! | ATACTGTTTTATTGCTGCGA+TGG | + | chr5.1:1869081-1869100 | MS.gene055464:intron | 35.0% |
| !! | TAAGAATTGCTCTAAGAGGT+TGG | - | chr5.1:1871112-1871131 | None:intergenic | 35.0% |
| !! | TTTTGACTGGATAAACCAGA+TGG | - | chr5.1:1869771-1869790 | None:intergenic | 35.0% |
| !!! | GCTGCGATGGTTTTTTTTTT+TGG | + | chr5.1:1869094-1869113 | MS.gene055464:intron | 35.0% |
| AAGACAAGCATGTTTGGACT+AGG | + | chr5.1:1871640-1871659 | MS.gene055464:CDS | 40.0% | |
| AATTCGGGATGATAAATCCC+TGG | + | chr5.1:1871044-1871063 | MS.gene055464:intron | 40.0% | |
| AGAGGAGTTGTTCTACCTAA+AGG | + | chr5.1:1869349-1869368 | MS.gene055464:CDS | 40.0% | |
| AGTGAGGAGAACAAGATCAA+TGG | - | chr5.1:1868284-1868303 | None:intergenic | 40.0% | |
| ATATCGGTGAAGAACTTCTC+GGG | + | chr5.1:1868934-1868953 | MS.gene055464:CDS | 40.0% | |
| ATCAAACCACAGATAATCGC+AGG | - | chr5.1:1867956-1867975 | None:intergenic | 40.0% | |
| ATGTAGAAAAATGAGCGCGA+AGG | - | chr5.1:1871309-1871328 | None:intergenic | 40.0% | |
| ATTTGGAGAAGGCTCGATAA+CGG | + | chr5.1:1870266-1870285 | MS.gene055464:intron | 40.0% | |
| CAAAGTCAAGCAGATGTGTT+AGG | - | chr5.1:1871412-1871431 | None:intergenic | 40.0% | |
| CAGAGAGCTACTAGTGATAT+CGG | + | chr5.1:1868918-1868937 | MS.gene055464:intron | 40.0% | |
| CATGGGTAATAACTTCAGGT+GGG | - | chr5.1:1869901-1869920 | None:intergenic | 40.0% | |
| CCTCTGTCTTATGGAAGATA+AGG | + | chr5.1:1872113-1872132 | MS.gene055464:intron | 40.0% | |
| CCTTATCTTCCATAAGACAG+AGG | - | chr5.1:1872116-1872135 | None:intergenic | 40.0% | |
| CTAACACATCTGCTTGACTT+TGG | + | chr5.1:1871410-1871429 | MS.gene055464:intron | 40.0% | |
| CTCAGAACTCTATTTGGAGA+AGG | + | chr5.1:1870255-1870274 | MS.gene055464:intron | 40.0% | |
| CTTGAATTTAAGGGCAAGGA+GGG | + | chr5.1:1871559-1871578 | MS.gene055464:CDS | 40.0% | |
| GAAAAGAGTCACAGGTAACT+AGG | - | chr5.1:1872064-1872083 | None:intergenic | 40.0% | |
| GAAAGGCAGCAAGTATGTAT+TGG | + | chr5.1:1871528-1871547 | MS.gene055464:CDS | 40.0% | |
| GAGTCCTATCTTGAACAAAG+AGG | + | chr5.1:1869331-1869350 | MS.gene055464:CDS | 40.0% | |
| GATATCGGTGAAGAACTTCT+CGG | + | chr5.1:1868933-1868952 | MS.gene055464:CDS | 40.0% | |
| GATGATAAATCCCTGGTTTC+CGG | + | chr5.1:1871051-1871070 | MS.gene055464:intron | 40.0% | |
| GGAAAACTATCTCTTCTCAG+AGG | - | chr5.1:1871083-1871102 | None:intergenic | 40.0% | |
| GGAATGGTACTGCAAATACA+AGG | - | chr5.1:1869866-1869885 | None:intergenic | 40.0% | |
| GGGAGAGTTCCTTGAATTTA+AGG | + | chr5.1:1871549-1871568 | MS.gene055464:CDS | 40.0% | |
| GTATTAGGTGTGGAAGGAAA+TGG | + | chr5.1:1869219-1869238 | MS.gene055464:intron | 40.0% | |
| GTTCCTTGAATTTAAGGGCA+AGG | + | chr5.1:1871555-1871574 | MS.gene055464:CDS | 40.0% | |
| GTTGGAAGAAGTAAGAAAGC+AGG | + | chr5.1:1869297-1869316 | MS.gene055464:intron | 40.0% | |
| TCATGGGTAATAACTTCAGG+TGG | - | chr5.1:1869902-1869921 | None:intergenic | 40.0% | |
| TTATGAGGCTGTATTAGGTG+TGG | + | chr5.1:1869209-1869228 | MS.gene055464:intron | 40.0% | |
| TTGAATTTAAGGGCAAGGAG+GGG | + | chr5.1:1871560-1871579 | MS.gene055464:CDS | 40.0% | |
| TTGGGGTTATCTGTTGTACA+GGG | + | chr5.1:1870615-1870634 | MS.gene055464:intron | 40.0% | |
| TTTCCAACACTTCTGGTAGA+AGG | + | chr5.1:1868473-1868492 | MS.gene055464:intron | 40.0% | |
| TTTGTTCAAGATAGGACTCG+AGG | - | chr5.1:1869330-1869349 | None:intergenic | 40.0% | |
| ! | ACTGAGATCATCTTTCAGGT+TGG | + | chr5.1:1872300-1872319 | MS.gene055464:CDS | 40.0% |
| ! | CCAAAATGTTCCTTTTGCCA+AGG | - | chr5.1:1870599-1870618 | None:intergenic | 40.0% |
| ! | CCTTGACAACACTTTTGCTT+AGG | + | chr5.1:1870168-1870187 | MS.gene055464:intron | 40.0% |
| ! | CCTTGGCAAAAGGAACATTT+TGG | + | chr5.1:1870596-1870615 | MS.gene055464:intron | 40.0% |
| ! | CCTTTTAGTGAGGAGAACAT+CGG | - | chr5.1:1868437-1868456 | None:intergenic | 40.0% |
| ! | CGGTCAACTTTATGTTTTCC+TGG | - | chr5.1:1869003-1869022 | None:intergenic | 40.0% |
| ! | CTTTTATGACGACGACGTTT+TGG | + | chr5.1:1868000-1868019 | MS.gene055464:CDS | 40.0% |
| ! | GCAACTTAAATTTGGGATGG+AGG | - | chr5.1:1870786-1870805 | None:intergenic | 40.0% |
| ! | GTCCAAACATGCTTGTCTTT+TGG | - | chr5.1:1871639-1871658 | None:intergenic | 40.0% |
| ! | TTTGGGGTTATCTGTTGTAC+AGG | + | chr5.1:1870614-1870633 | MS.gene055464:intron | 40.0% |
| !! | ATGTTTTCCTGGCTTTTCAC+AGG | - | chr5.1:1868992-1869011 | None:intergenic | 40.0% |
| !! | ATTTTGACAGTTCAAGGGGA+TGG | + | chr5.1:1868958-1868977 | MS.gene055464:CDS | 40.0% |
| !! | CCTAAGCAAAAGTGTTGTCA+AGG | - | chr5.1:1870171-1870190 | None:intergenic | 40.0% |
| !! | CGGGAATTTTGACAGTTCAA+GGG | + | chr5.1:1868953-1868972 | MS.gene055464:CDS | 40.0% |
| !! | GGGAATTTTGACAGTTCAAG+GGG | + | chr5.1:1868954-1868973 | MS.gene055464:CDS | 40.0% |
| !! | TCAGAAGCTTTTTGGTGGAA+AGG | + | chr5.1:1868210-1868229 | MS.gene055464:CDS | 40.0% |
| !! | TCGGGAATTTTGACAGTTCA+AGG | + | chr5.1:1868952-1868971 | MS.gene055464:CDS | 40.0% |
| AAGAGGTTCCTTACAGGATC+AGG | - | chr5.1:1869030-1869049 | None:intergenic | 45.0% | |
| AGAGGTTCCTTACAGGATCA+GGG | - | chr5.1:1869029-1869048 | None:intergenic | 45.0% | |
| AGTTCAAGGGGATGGTAGTT+GGG | + | chr5.1:1868966-1868985 | MS.gene055464:CDS | 45.0% | |
| CAGTTGCACCAACTGTTCAT+GGG | - | chr5.1:1869918-1869937 | None:intergenic | 45.0% | |
| CCGATGTTCTCCTCACTAAA+AGG | + | chr5.1:1868434-1868453 | MS.gene055464:intron | 45.0% | |
| CCTCCTTGCCCTTAAATTCA+AGG | - | chr5.1:1871561-1871580 | None:intergenic | 45.0% | |
| CCTTGAATTTAAGGGCAAGG+AGG | + | chr5.1:1871558-1871577 | MS.gene055464:CDS | 45.0% | |
| GCTTTGCTGGGTCTATAAGT+AGG | - | chr5.1:1870388-1870407 | None:intergenic | 45.0% | |
| TCAGTTGCACCAACTGTTCA+TGG | - | chr5.1:1869919-1869938 | None:intergenic | 45.0% | |
| TGAATTTAAGGGCAAGGAGG+GGG | + | chr5.1:1871561-1871580 | MS.gene055464:CDS | 45.0% | |
| TGCACCCTACATAATAGGCT+CGG | + | chr5.1:1871340-1871359 | MS.gene055464:intron | 45.0% | |
| TGGGAAATCACTAGCAGGAA+TGG | - | chr5.1:1869882-1869901 | None:intergenic | 45.0% | |
| TGGGGAAATACCTTGGCAAA+AGG | + | chr5.1:1870586-1870605 | MS.gene055464:intron | 45.0% | |
| TTCCGTGACTACAGAACCAA+GGG | + | chr5.1:1872234-1872253 | MS.gene055464:CDS | 45.0% | |
| TTCTCTTCTCCGTAGCTAAC+AGG | + | chr5.1:1868047-1868066 | MS.gene055464:CDS | 45.0% | |
| TTGCCCGAGCCTATTATGTA+GGG | - | chr5.1:1871347-1871366 | None:intergenic | 45.0% | |
| TTTCCGTGACTACAGAACCA+AGG | + | chr5.1:1872233-1872252 | MS.gene055464:CDS | 45.0% | |
| ! | AAAGAGTGTGCTCTCTAGCT+GGG | + | chr5.1:1869949-1869968 | MS.gene055464:CDS | 45.0% |
| ! | ACACCTTCTACCAGAAGTGT+TGG | - | chr5.1:1868479-1868498 | None:intergenic | 45.0% |
| ! | AGAGAGCACACTCTTTGTTC+CGG | - | chr5.1:1869945-1869964 | None:intergenic | 45.0% |
| ! | AGGCTTCAGAAGCTTTTTGG+TGG | + | chr5.1:1868205-1868224 | MS.gene055464:intron | 45.0% |
| ! | TGCAGGCTTCAGAAGCTTTT+TGG | + | chr5.1:1868202-1868221 | MS.gene055464:intron | 45.0% |
| !! | AGATTGTTTGGCTTGCAGGT+TGG | + | chr5.1:1871501-1871520 | MS.gene055464:intron | 45.0% |
| !! | ATTAGGATGTCTGGCTTTGC+TGG | - | chr5.1:1870401-1870420 | None:intergenic | 45.0% |
| !! | CAACAGATTGTTTGGCTTGC+AGG | + | chr5.1:1871497-1871516 | MS.gene055464:intron | 45.0% |
| !! | TTAGGATGTCTGGCTTTGCT+GGG | - | chr5.1:1870400-1870419 | None:intergenic | 45.0% |
| AGCTACGGAGAAGAGAACAG+TGG | - | chr5.1:1868044-1868063 | None:intergenic | 50.0% | |
| ATGTGGCCTGCGATTATCTG+TGG | + | chr5.1:1867947-1867966 | MS.gene055464:CDS | 50.0% | |
| ATTTGGGTCCACACTCATCC+AGG | + | chr5.1:1871385-1871404 | MS.gene055464:intron | 50.0% | |
| CAAGCAGATGTGTTAGGACC+TGG | - | chr5.1:1871406-1871425 | None:intergenic | 50.0% | |
| CAGTTCAAGGGGATGGTAGT+TGG | + | chr5.1:1868965-1868984 | MS.gene055464:CDS | 50.0% | |
| CCTTAGCACAGCTCCGATAT+GGG | + | chr5.1:1870039-1870058 | MS.gene055464:CDS | 50.0% | |
| CTCTTCTCAGAGGATTGCTC+CGG | - | chr5.1:1871073-1871092 | None:intergenic | 50.0% | |
| GAGGCTGTATTAGGTGTGGA+AGG | + | chr5.1:1869213-1869232 | MS.gene055464:intron | 50.0% | |
| GCACCCTACATAATAGGCTC+GGG | + | chr5.1:1871341-1871360 | MS.gene055464:intron | 50.0% | |
| GGATGAGTGTGGACCCAAAT+AGG | - | chr5.1:1871385-1871404 | None:intergenic | 50.0% | |
| GGTGAAGCAGAATCAGCATC+AGG | - | chr5.1:1868256-1868275 | None:intergenic | 50.0% | |
| GTTGCCCGAGCCTATTATGT+AGG | - | chr5.1:1871348-1871367 | None:intergenic | 50.0% | |
| TCAGGTGGGAAATCACTAGC+AGG | - | chr5.1:1869887-1869906 | None:intergenic | 50.0% | |
| TCCTTACAGGATCAGGGTGA+CGG | - | chr5.1:1869023-1869042 | None:intergenic | 50.0% | |
| TCCTTAGCACAGCTCCGATA+TGG | + | chr5.1:1870038-1870057 | MS.gene055464:CDS | 50.0% | |
| TGCGACGTGGTAGAGAATGA+AGG | - | chr5.1:1871284-1871303 | None:intergenic | 50.0% | |
| TGTTAGGACCTGGATGAGTG+TGG | - | chr5.1:1871396-1871415 | None:intergenic | 50.0% | |
| ! | CAAAGAGTGTGCTCTCTAGC+TGG | + | chr5.1:1869948-1869967 | MS.gene055464:CDS | 50.0% |
| ! | GAGAGCACACTCTTTGTTCC+GGG | - | chr5.1:1869944-1869963 | None:intergenic | 50.0% |
| ! | GCTTGCAGGTTGGAACTGAA+AGG | + | chr5.1:1871511-1871530 | MS.gene055464:intron | 50.0% |
| !! | CTCCCTTGGTTCTGTAGTCA+CGG | - | chr5.1:1872239-1872258 | None:intergenic | 50.0% |
| ACCGTCACCCTGATCCTGTA+AGG | + | chr5.1:1869019-1869038 | MS.gene055464:intron | 55.0% | |
| ACGGTCACTTCGTTCCACTC+TGG | - | chr5.1:1872270-1872289 | None:intergenic | 55.0% | |
| AGAGGATTGCTCCGGAAACC+AGG | - | chr5.1:1871065-1871084 | None:intergenic | 55.0% | |
| AGTTGGGCCTGTGAAAAGCC+AGG | + | chr5.1:1868982-1869001 | MS.gene055464:CDS | 55.0% | |
| CCCATATCGGAGCTGTGCTA+AGG | - | chr5.1:1870042-1870061 | None:intergenic | 55.0% | |
| GAGGATTGCTCCGGAAACCA+GGG | - | chr5.1:1871064-1871083 | None:intergenic | 55.0% | |
| GCACAGCTCCGATATGGGAT+AGG | + | chr5.1:1870044-1870063 | MS.gene055464:CDS | 55.0% | |
| ! | CAGTTGGTGCAACTGAAGCC+CGG | + | chr5.1:1869923-1869942 | MS.gene055464:CDS | 55.0% |
| !! | GCTCTAAGAGGTTGGGCAGA+GGG | - | chr5.1:1871104-1871123 | None:intergenic | 55.0% |
| !! | TGCTCTAAGAGGTTGGGCAG+AGG | - | chr5.1:1871105-1871124 | None:intergenic | 55.0% |
| !! | AGGGAGCATCAGCACCAGAG+TGG | + | chr5.1:1872253-1872272 | MS.gene055464:CDS | 60.0% |
| !! | CTCTGGTGCTGATGCTCCCT+TGG | - | chr5.1:1872253-1872272 | None:intergenic | 60.0% |
| GAGCGCGAAGGAATGCGACG+TGG | - | chr5.1:1871297-1871316 | None:intergenic | 65.0% | |
| GGGCAAGGAGGGGGATGTTG+AGG | + | chr5.1:1871570-1871589 | MS.gene055464:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 1867947 | 1872386 | 1867947 | ID=MS.gene055464 |
| chr5.1 | mRNA | 1867947 | 1872386 | 1867947 | ID=MS.gene055464.t1;Parent=MS.gene055464 |
| chr5.1 | exon | 1867947 | 1868068 | 1867947 | ID=MS.gene055464.t1.exon1;Parent=MS.gene055464.t1 |
| chr5.1 | CDS | 1867947 | 1868068 | 1867947 | ID=cds.MS.gene055464.t1;Parent=MS.gene055464.t1 |
| chr5.1 | exon | 1868207 | 1868308 | 1868207 | ID=MS.gene055464.t1.exon2;Parent=MS.gene055464.t1 |
| chr5.1 | CDS | 1868207 | 1868308 | 1868207 | ID=cds.MS.gene055464.t1;Parent=MS.gene055464.t1 |
| chr5.1 | exon | 1868921 | 1869035 | 1868921 | ID=MS.gene055464.t1.exon3;Parent=MS.gene055464.t1 |
| chr5.1 | CDS | 1868921 | 1869035 | 1868921 | ID=cds.MS.gene055464.t1;Parent=MS.gene055464.t1 |
| chr5.1 | exon | 1869298 | 1869413 | 1869298 | ID=MS.gene055464.t1.exon4;Parent=MS.gene055464.t1 |
| chr5.1 | CDS | 1869298 | 1869413 | 1869298 | ID=cds.MS.gene055464.t1;Parent=MS.gene055464.t1 |
| chr5.1 | exon | 1869877 | 1870065 | 1869877 | ID=MS.gene055464.t1.exon5;Parent=MS.gene055464.t1 |
| chr5.1 | CDS | 1869877 | 1870065 | 1869877 | ID=cds.MS.gene055464.t1;Parent=MS.gene055464.t1 |
| chr5.1 | exon | 1871519 | 1871661 | 1871519 | ID=MS.gene055464.t1.exon6;Parent=MS.gene055464.t1 |
| chr5.1 | CDS | 1871519 | 1871661 | 1871519 | ID=cds.MS.gene055464.t1;Parent=MS.gene055464.t1 |
| chr5.1 | exon | 1872205 | 1872386 | 1872205 | ID=MS.gene055464.t1.exon7;Parent=MS.gene055464.t1 |
| chr5.1 | CDS | 1872205 | 1872386 | 1872205 | ID=cds.MS.gene055464.t1;Parent=MS.gene055464.t1 |
| Gene Sequence |
| Protein sequence |
