Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051066.t1 | XP_003627372.1 | 89.4 | 310 | 29 | 2 | 1 | 309 | 1 | 307 | 1.60E-143 | 519.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051066.t1 | Q9LJG8 | 36.6 | 399 | 139 | 9 | 1 | 306 | 1 | 378 | 2.1e-43 | 177.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051066.t1 | G7L8C7 | 89.4 | 310 | 29 | 2 | 1 | 309 | 1 | 307 | 1.2e-143 | 519.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051066.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene051066 | 0.800336 | 1.51E-48 | -1.69E-46 |
| MS.gene050654 | MS.gene051066 | 0.813083 | 3.06E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene051198 | 0.823611 | 1.26E-53 | -1.69E-46 |
| MS.gene051066 | MS.gene051800 | 0.808008 | 3.82E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene055926 | 0.810308 | 1.23E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene056045 | 0.818686 | 1.72E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene056308 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene056973 | 0.814788 | 1.29E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene059842 | 0.802733 | 4.88E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene060310 | 0.803357 | 3.62E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene060802 | 0.81949 | 1.13E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene062156 | 0.825263 | 5.16E-54 | -1.69E-46 |
| MS.gene051066 | MS.gene063209 | 0.814804 | 1.28E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene063772 | 0.860489 | 1.99E-63 | -1.69E-46 |
| MS.gene051066 | MS.gene063856 | 0.833359 | 5.58E-56 | -1.69E-46 |
| MS.gene051066 | MS.gene066239 | 0.804647 | 1.95E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene06740 | 0.816324 | 5.86E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene067812 | 0.803824 | 2.90E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene068327 | 0.808503 | 3.00E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene068529 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene051066 | MS.gene069519 | 0.829758 | 4.30E-55 | -1.69E-46 |
| MS.gene051066 | MS.gene06958 | 0.814954 | 1.18E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene069945 | 0.800893 | 1.16E-48 | -1.69E-46 |
| MS.gene051066 | MS.gene07144 | 0.810157 | 1.33E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene071905 | 0.831171 | 1.94E-55 | -1.69E-46 |
| MS.gene051066 | MS.gene072994 | 0.815734 | 7.94E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene073016 | -0.825041 | 5.82E-54 | -1.69E-46 |
| MS.gene051066 | MS.gene073132 | 0.800709 | 1.27E-48 | -1.69E-46 |
| MS.gene051066 | MS.gene073390 | 0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene074462 | 0.840176 | 1.02E-57 | -1.69E-46 |
| MS.gene051066 | MS.gene074587 | 0.860344 | 2.21E-63 | -1.69E-46 |
| MS.gene051066 | MS.gene074604 | 0.823323 | 1.47E-53 | -1.69E-46 |
| MS.gene051066 | MS.gene074607 | 0.805299 | 1.43E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene07510 | 0.845277 | 4.49E-59 | -1.69E-46 |
| MS.gene051066 | MS.gene08131 | 0.807762 | 4.31E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene08961 | 0.800445 | 1.44E-48 | -1.69E-46 |
| MS.gene051066 | MS.gene09191 | 0.801411 | 9.12E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene22091 | 0.817946 | 2.53E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene22516 | 0.818497 | 1.90E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene22645 | 0.801622 | 8.26E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene22705 | 0.82167 | 3.57E-53 | -1.69E-46 |
| MS.gene051066 | MS.gene22814 | -0.806 | 1.02E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene25079 | 0.838364 | 3.01E-57 | -1.69E-46 |
| MS.gene051066 | MS.gene28986 | 0.809717 | 1.65E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene30753 | 0.801923 | 7.16E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene31305 | 0.802181 | 6.34E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene31904 | 0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene33135 | 0.802588 | 5.23E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene33644 | 0.810509 | 1.11E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene34018 | 0.814485 | 1.50E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene34065 | 0.827826 | 1.26E-54 | -1.69E-46 |
| MS.gene051066 | MS.gene35808 | 0.826319 | 2.90E-54 | -1.69E-46 |
| MS.gene051066 | MS.gene35822 | 0.818043 | 2.41E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene35823 | 0.818689 | 1.72E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene35824 | 0.812001 | 5.28E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene35864 | 0.820964 | 5.19E-53 | -1.69E-46 |
| MS.gene051066 | MS.gene35867 | 0.808006 | 3.83E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene36154 | 0.800711 | 1.27E-48 | -1.69E-46 |
| MS.gene051066 | MS.gene36289 | 0.827542 | 1.48E-54 | -1.69E-46 |
| MS.gene051066 | MS.gene36569 | 0.811556 | 6.60E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene38378 | 0.805661 | 1.20E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene39874 | 0.80591 | 1.06E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene40381 | -0.83032 | 3.14E-55 | -1.69E-46 |
| MS.gene051066 | MS.gene40518 | 0.808161 | 3.55E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene41838 | 0.834796 | 2.44E-56 | -1.69E-46 |
| MS.gene051066 | MS.gene42125 | 0.8053 | 1.43E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene43447 | 0.829674 | 4.51E-55 | -1.69E-46 |
| MS.gene051066 | MS.gene43838 | 0.806643 | 7.45E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene45732 | 0.803292 | 3.74E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene47603 | 0.802514 | 5.41E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene48793 | 0.803367 | 3.61E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene49946 | 0.807536 | 4.82E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene54772 | 0.808773 | 2.63E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene58617 | 0.80428 | 2.33E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene59513 | 0.817019 | 4.10E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene59948 | 0.817199 | 3.73E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene63530 | 0.823079 | 1.68E-53 | -1.69E-46 |
| MS.gene051066 | MS.gene65095 | 0.826707 | 2.34E-54 | -1.69E-46 |
| MS.gene051066 | MS.gene67007 | 0.804954 | 1.69E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene68264 | 0.811006 | 8.69E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene70895 | 0.811015 | 8.65E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene72697 | 0.800185 | 1.62E-48 | -1.69E-46 |
| MS.gene051066 | MS.gene75866 | 0.81674 | 4.73E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene77356 | 0.818454 | 1.94E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene82879 | 0.822597 | 2.18E-53 | -1.69E-46 |
| MS.gene051066 | MS.gene83056 | 0.806553 | 7.78E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene83624 | 0.800221 | 1.60E-48 | -1.69E-46 |
| MS.gene051066 | MS.gene84840 | 0.823971 | 1.04E-53 | -1.69E-46 |
| MS.gene051066 | MS.gene86826 | 0.8349 | 2.29E-56 | -1.69E-46 |
| MS.gene051066 | MS.gene87669 | 0.814904 | 1.21E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene88512 | 0.806644 | 7.44E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene89104 | 0.843893 | 1.06E-58 | -1.69E-46 |
| MS.gene051066 | MS.gene90525 | 0.811069 | 8.42E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene91416 | 0.805877 | 1.08E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene92340 | 0.802169 | 6.37E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene96191 | 0.819214 | 1.31E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene96210 | 0.808871 | 2.50E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene99986 | 0.825145 | 5.50E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051066.t1 | MTR_8g022290 | 95.166 | 331 | 12 | 2 | 1 | 330 | 1 | 328 | 0.0 | 552 |
| MS.gene051066.t1 | MTR_2g016140 | 59.804 | 102 | 37 | 2 | 66 | 166 | 19 | 117 | 1.34e-35 | 133 |
| MS.gene051066.t1 | MTR_2g016140 | 53.030 | 66 | 28 | 1 | 265 | 330 | 236 | 298 | 1.03e-14 | 74.7 |
| MS.gene051066.t1 | MTR_2g016140 | 59.804 | 102 | 37 | 2 | 66 | 166 | 19 | 117 | 1.70e-35 | 133 |
| MS.gene051066.t1 | MTR_2g016140 | 53.030 | 66 | 28 | 1 | 265 | 330 | 236 | 298 | 1.48e-14 | 74.3 |
| MS.gene051066.t1 | MTR_4g079960 | 57.391 | 115 | 35 | 4 | 65 | 171 | 26 | 134 | 1.11e-33 | 127 |
| MS.gene051066.t1 | MTR_4g079960 | 57.391 | 115 | 35 | 4 | 65 | 171 | 26 | 134 | 2.05e-33 | 127 |
| MS.gene051066.t1 | MTR_4g079960 | 57.391 | 115 | 35 | 4 | 65 | 171 | 26 | 134 | 2.08e-33 | 127 |
| MS.gene051066.t1 | MTR_2g102227 | 30.418 | 263 | 131 | 8 | 70 | 330 | 274 | 486 | 4.72e-22 | 98.2 |
| MS.gene051066.t1 | MTR_2g092960 | 39.450 | 109 | 58 | 3 | 67 | 171 | 43 | 147 | 3.24e-17 | 84.3 |
| MS.gene051066.t1 | MTR_3g014280 | 26.299 | 308 | 162 | 12 | 54 | 330 | 21 | 294 | 4.93e-17 | 81.6 |
| MS.gene051066.t1 | MTR_6g486270 | 36.000 | 100 | 59 | 2 | 70 | 169 | 130 | 224 | 2.48e-16 | 80.1 |
| MS.gene051066.t1 | MTR_1g037650 | 36.066 | 122 | 68 | 2 | 54 | 174 | 21 | 133 | 7.91e-15 | 72.8 |
| MS.gene051066.t1 | MTR_1g061600 | 34.375 | 96 | 57 | 2 | 70 | 165 | 133 | 222 | 1.05e-14 | 75.9 |
| MS.gene051066.t1 | MTR_4g117990 | 32.632 | 95 | 62 | 1 | 69 | 163 | 43 | 135 | 5.39e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051066.t1 | AT3G14180 | 47.656 | 384 | 109 | 11 | 34 | 330 | 24 | 402 | 1.53e-90 | 280 |
| MS.gene051066.t1 | AT1G54060 | 41.176 | 374 | 147 | 13 | 1 | 330 | 1 | 345 | 1.53e-53 | 182 |
| MS.gene051066.t1 | AT5G05550 | 39.552 | 268 | 102 | 7 | 65 | 330 | 19 | 228 | 1.68e-43 | 152 |
| MS.gene051066.t1 | AT5G05550 | 39.552 | 268 | 102 | 7 | 65 | 330 | 19 | 228 | 2.16e-43 | 152 |
| MS.gene051066.t1 | AT5G05550 | 39.552 | 268 | 102 | 7 | 65 | 330 | 19 | 228 | 3.16e-43 | 151 |
| MS.gene051066.t1 | AT3G58630 | 37.143 | 280 | 146 | 8 | 66 | 329 | 22 | 287 | 3.71e-43 | 153 |
| MS.gene051066.t1 | AT3G58630 | 37.143 | 280 | 146 | 8 | 66 | 329 | 22 | 287 | 4.20e-43 | 153 |
| MS.gene051066.t1 | AT3G11100 | 41.852 | 270 | 98 | 7 | 65 | 330 | 17 | 231 | 6.61e-43 | 150 |
| MS.gene051066.t1 | AT3G10030 | 36.283 | 113 | 66 | 2 | 70 | 182 | 161 | 267 | 7.93e-18 | 85.5 |
| MS.gene051066.t1 | AT3G10030 | 36.283 | 113 | 66 | 2 | 70 | 182 | 161 | 267 | 9.21e-18 | 85.5 |
| MS.gene051066.t1 | AT3G24490 | 33.846 | 130 | 76 | 4 | 70 | 197 | 90 | 211 | 7.44e-17 | 81.3 |
| MS.gene051066.t1 | AT3G54390 | 40.404 | 99 | 50 | 2 | 66 | 164 | 34 | 123 | 2.29e-16 | 79.3 |
| MS.gene051066.t1 | AT3G54390 | 40.404 | 99 | 50 | 2 | 66 | 164 | 50 | 139 | 2.49e-16 | 79.7 |
| MS.gene051066.t1 | AT2G44730 | 32.632 | 95 | 62 | 1 | 69 | 163 | 63 | 155 | 5.81e-12 | 67.0 |
| MS.gene051066.t1 | AT3G24860 | 28.800 | 125 | 67 | 3 | 39 | 163 | 45 | 147 | 9.29e-12 | 65.9 |
Find 112 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGGTACGGCTGCAGTTT+GGG | 0.185680 | 8.3:-69495626 | None:intergenic |
| ACTCAGGCAATTGTGAAATT+TGG | 0.238839 | 8.3:+69494272 | MS.gene051066:CDS |
| ATAGCTATGGGACTGAATTT+TGG | 0.267179 | 8.3:-69495545 | None:intergenic |
| GATGAAGTTTGCTAAGGATT+TGG | 0.272524 | 8.3:+69494358 | MS.gene051066:CDS |
| GATCGGTTAGATCAGTTAAT+TGG | 0.279898 | 8.3:+69493900 | MS.gene051066:CDS |
| GCCAAGATTAGTGGTGTTTC+CGG | 0.285327 | 8.3:+69493930 | MS.gene051066:CDS |
| CTGTGACAAATGACTGTTTC+CGG | 0.295901 | 8.3:-69493964 | None:intergenic |
| GAGGTTGCAGAGATTGTTAA+TGG | 0.309527 | 8.3:+69493729 | MS.gene051066:CDS |
| AGGCAGGTACGGCTGCAGTT+TGG | 0.318815 | 8.3:-69495627 | None:intergenic |
| TTCGGTGACGGTTGCGGCAC+CGG | 0.338241 | 8.3:+69493536 | MS.gene051066:CDS |
| TCCATCTCCGGTGTCGTCTC+CGG | 0.352746 | 8.3:+69493497 | MS.gene051066:CDS |
| CACAGAAAAGCCAGCACCGC+TGG | 0.364297 | 8.3:+69495704 | MS.gene051066:CDS |
| GTTTCACGTCCCAGCGGTGC+TGG | 0.375268 | 8.3:-69495714 | None:intergenic |
| CCTGTTGGTATTCGCGCCTC+TGG | 0.397120 | 8.3:+69494008 | MS.gene051066:CDS |
| GTGGAGGGAGGGAGGATTGT+TGG | 0.405449 | 8.3:+69493616 | MS.gene051066:CDS |
| CCATCTCCGGTGTCGTCTCC+GGG | 0.410853 | 8.3:+69493498 | MS.gene051066:CDS |
| AGCGTGGGGAGAGAGGTATT+TGG | 0.415050 | 8.3:+69493668 | MS.gene051066:CDS |
| AAAACAGCCGCAACAGCTGC+TGG | 0.415089 | 8.3:+69495651 | MS.gene051066:CDS |
| AAATTCGAAGGGTAGAGGTT+GGG | 0.416300 | 8.3:+69494229 | MS.gene051066:CDS |
| GGGAGCGATCGGTAGGATTT+CGG | 0.429065 | 8.3:+69493518 | MS.gene051066:CDS |
| ATCGGTGCTGGAGGTGGCTC+CGG | 0.432598 | 8.3:+69493846 | MS.gene051066:CDS |
| ACCGGAAACACCACTAATCT+TGG | 0.441082 | 8.3:-69493931 | None:intergenic |
| GGCGGTGTTGATTGAAGCGT+GGG | 0.449332 | 8.3:+69493653 | MS.gene051066:CDS |
| AATGCATAGCTGTTCGCCGC+CGG | 0.453869 | 8.3:-69493555 | None:intergenic |
| ATCATAAAACCGCCAAGTGC+TGG | 0.468333 | 8.3:-69493880 | None:intergenic |
| TAGGATTTCGGTGACGGTTG+CGG | 0.476805 | 8.3:+69493530 | MS.gene051066:CDS |
| GTCGAAGTTGCAGCAGGTGG+TGG | 0.476922 | 8.3:+69494319 | MS.gene051066:CDS |
| GCAGAGATTGTTAATGGAAG+AGG | 0.480346 | 8.3:+69493735 | MS.gene051066:CDS |
| CTGATATTCAGTGTAAGAAT+CGG | 0.482219 | 8.3:+69493781 | MS.gene051066:CDS |
| GGTCCAGCTGCCAAGATTAG+TGG | 0.484802 | 8.3:+69493921 | MS.gene051066:CDS |
| AGGTTGGGGAAGTGCGGTGA+GGG | 0.485234 | 8.3:+69494244 | MS.gene051066:CDS |
| CCAGAGGCGCGAATACCAAC+AGG | 0.485804 | 8.3:-69494008 | None:intergenic |
| GGCGAGTGGTTCTCCATCTC+CGG | 0.489845 | 8.3:+69493485 | MS.gene051066:CDS |
| AATTCGAAGGGTAGAGGTTG+GGG | 0.490571 | 8.3:+69494230 | MS.gene051066:CDS |
| GGTTAAGAAGAAGTATAAAT+CGG | 0.490848 | 8.3:+69493812 | MS.gene051066:CDS |
| GGAATTTGAAGCAGAAGCAT+TGG | 0.493242 | 8.3:+69493703 | MS.gene051066:CDS |
| GCTCTCTTCCTCTCCGGTGG+TGG | 0.494319 | 8.3:-69494191 | None:intergenic |
| GTTGCAGCAGGTGGTGGAGA+TGG | 0.496264 | 8.3:+69494325 | MS.gene051066:CDS |
| GAGAAAGCTAAGATCGGTGC+TGG | 0.500736 | 8.3:+69493834 | MS.gene051066:CDS |
| ATGACTGTTTCCGGTATGAC+TGG | 0.507321 | 8.3:-69493955 | None:intergenic |
| AATTCAAATTCGAAGGGTAG+AGG | 0.507913 | 8.3:+69494224 | MS.gene051066:CDS |
| CCACGTGTCGTATTCTGAAT+CGG | 0.509196 | 8.3:-69493585 | None:intergenic |
| GCTAAGATCGGTGCTGGAGG+TGG | 0.509682 | 8.3:+69493840 | MS.gene051066:CDS |
| ACTTTCGCTCTCTTCCTCTC+CGG | 0.511815 | 8.3:-69494197 | None:intergenic |
| TGGAAGCAACGGTGGAGGGA+GGG | 0.519025 | 8.3:+69493605 | MS.gene051066:CDS |
| GTGTCGTCTCCGGGAGCGAT+CGG | 0.520173 | 8.3:+69493507 | MS.gene051066:CDS |
| GGTATTTGGAATTGAGCAGA+GGG | 0.520971 | 8.3:+69493682 | MS.gene051066:CDS |
| GATCGGTAGGATTTCGGTGA+CGG | 0.523152 | 8.3:+69493524 | MS.gene051066:CDS |
| GGAGAACCACTCGCCGGAGA+TGG | 0.523745 | 8.3:-69493477 | None:intergenic |
| GAAGCAGAAGCATTGGAAAG+AGG | 0.525294 | 8.3:+69493710 | MS.gene051066:CDS |
| AGTGATGAATTCAAATTCGA+AGG | 0.528546 | 8.3:+69494217 | MS.gene051066:CDS |
| CCCGGAGACGACACCGGAGA+TGG | 0.529470 | 8.3:-69493498 | None:intergenic |
| TCACAGCAGAAAGTTCCGTT+AGG | 0.530119 | 8.3:+69493981 | MS.gene051066:CDS |
| GCAGAGGATGAAGTTTGCTA+AGG | 0.530659 | 8.3:+69494352 | MS.gene051066:CDS |
| CAAATTCGAAGGGTAGAGGT+TGG | 0.531996 | 8.3:+69494228 | MS.gene051066:CDS |
| ACACCACTAATCTTGGCAGC+TGG | 0.541940 | 8.3:-69493924 | None:intergenic |
| GAAATCCTACCGATCGCTCC+CGG | 0.544759 | 8.3:-69493516 | None:intergenic |
| GGATGCTTGAGGCATAGCTA+TGG | 0.545553 | 8.3:-69495558 | None:intergenic |
| GTGGAAGCAACGGTGGAGGG+AGG | 0.547610 | 8.3:+69493604 | MS.gene051066:CDS |
| CACGTGGAAGCAACGGTGGA+GGG | 0.548507 | 8.3:+69493601 | MS.gene051066:CDS |
| GTGTAAGAATCGGATTGATA+CGG | 0.548630 | 8.3:+69493791 | MS.gene051066:CDS |
| TTCGCTCTCTTCCTCTCCGG+TGG | 0.556083 | 8.3:-69494194 | None:intergenic |
| GGAGACGTCGAAGTTGCAGC+AGG | 0.559673 | 8.3:+69494313 | MS.gene051066:CDS |
| TGCGGTGAGGGAATTGACTC+AGG | 0.559802 | 8.3:+69494256 | MS.gene051066:CDS |
| GCAGGTACGGCTGCAGTTTG+GGG | 0.560060 | 8.3:-69495625 | None:intergenic |
| TGATAGTCCAGCAGCTGTTG+CGG | 0.560612 | 8.3:-69495658 | None:intergenic |
| AATACGACACGTGGAAGCAA+CGG | 0.563694 | 8.3:+69493594 | MS.gene051066:CDS |
| AGGTATTTGGAATTGAGCAG+AGG | 0.565655 | 8.3:+69493681 | MS.gene051066:CDS |
| TGGTGGAGATGGAGAAGCAG+AGG | 0.566345 | 8.3:+69494336 | MS.gene051066:CDS |
| ACAGAAAAGCCAGCACCGCT+GGG | 0.566501 | 8.3:+69495705 | MS.gene051066:CDS |
| TGATTGAAGCGTGGGGAGAG+AGG | 0.567107 | 8.3:+69493661 | MS.gene051066:CDS |
| GTGTTACAACCAGCACTTGG+CGG | 0.570584 | 8.3:+69493871 | MS.gene051066:CDS |
| CGGCGGTGTTGATTGAAGCG+TGG | 0.570892 | 8.3:+69493652 | MS.gene051066:CDS |
| GTTTCCGGTATGACTGGTAC+CGG | 0.572913 | 8.3:-69493949 | None:intergenic |
| GACGTCGAAGTTGCAGCAGG+TGG | 0.576057 | 8.3:+69494316 | MS.gene051066:CDS |
| ACACGTGGAAGCAACGGTGG+AGG | 0.578608 | 8.3:+69493600 | MS.gene051066:CDS |
| GTTTCCGGTACCAGTCATAC+CGG | 0.579315 | 8.3:+69493945 | MS.gene051066:CDS |
| ATCGCTCCCGGAGACGACAC+CGG | 0.585960 | 8.3:-69493504 | None:intergenic |
| GTGATGAATTCAAATTCGAA+GGG | 0.588610 | 8.3:+69494218 | MS.gene051066:CDS |
| GCTATTGCTTGGGATGCTTG+AGG | 0.588655 | 8.3:-69495569 | None:intergenic |
| AGTGCTGGTTGTAACACCGC+CGG | 0.591035 | 8.3:-69493865 | None:intergenic |
| GCGGTGTTACAACCAGCACT+TGG | 0.592137 | 8.3:+69493868 | MS.gene051066:CDS |
| TTGTTGGAGCGAAGCAGCGA+CGG | 0.593492 | 8.3:+69493632 | MS.gene051066:CDS |
| AAGCGACAGTTTACCACCAC+CGG | 0.595248 | 8.3:+69494178 | MS.gene051066:CDS |
| AAGCAACGGTGGAGGGAGGG+AGG | 0.596019 | 8.3:+69493608 | MS.gene051066:CDS |
| GATCCACTCGAATCCATCTC+CGG | 0.596077 | 8.3:+69493464 | MS.gene051066:CDS |
| GATGCTTGAGGCATAGCTAT+GGG | 0.599077 | 8.3:-69495557 | None:intergenic |
| CGTCTCCGGGAGCGATCGGT+AGG | 0.601980 | 8.3:+69493511 | MS.gene051066:CDS |
| GAGGTTGGGGAAGTGCGGTG+AGG | 0.603254 | 8.3:+69494243 | MS.gene051066:CDS |
| GGTGCTGGAGGTGGCTCCGG+CGG | 0.604719 | 8.3:+69493849 | MS.gene051066:CDS |
| GGGTAGAGGTTGGGGAAGTG+CGG | 0.606406 | 8.3:+69494238 | MS.gene051066:CDS |
| ATTCGCGCCTCTGGAGCTAG+AGG | 0.614912 | 8.3:+69494017 | MS.gene051066:CDS |
| TGGTGAAGCTTATGAACAAG+CGG | 0.615901 | 8.3:+69494292 | MS.gene051066:CDS |
| TCGAATCCATCTCCGGCGAG+TGG | 0.616080 | 8.3:+69493471 | MS.gene051066:CDS |
| AAATCGGAGAAAGCTAAGAT+CGG | 0.619321 | 8.3:+69493828 | MS.gene051066:CDS |
| GGTGACGGTTGCGGCACCGG+CGG | 0.620431 | 8.3:+69493539 | MS.gene051066:CDS |
| GTTCCGTTAGGAATTCCTGT+TGG | 0.621548 | 8.3:+69493993 | MS.gene051066:CDS |
| TTGGAGCGAAGCAGCGACGG+CGG | 0.631965 | 8.3:+69493635 | MS.gene051066:CDS |
| AAAGCTAAGATCGGTGCTGG+AGG | 0.634146 | 8.3:+69493837 | MS.gene051066:CDS |
| GGAGATGGAGAACCACTCGC+CGG | 0.634434 | 8.3:-69493483 | None:intergenic |
| GGTAAACTGTCGCTTGACAC+CGG | 0.634602 | 8.3:-69494170 | None:intergenic |
| ATTCGCGCCTCTAGCTCCAG+AGG | 0.645061 | 8.3:-69494024 | None:intergenic |
| ACGACACGTGGAAGCAACGG+TGG | 0.649070 | 8.3:+69493597 | MS.gene051066:CDS |
| CCGATTCAGAATACGACACG+TGG | 0.663489 | 8.3:+69493585 | MS.gene051066:CDS |
| TGACGACGACTCGATCCACT+CGG | 0.670258 | 8.3:+69493434 | MS.gene051066:CDS |
| ATACCAACAGGAATTCCTAA+CGG | 0.670478 | 8.3:-69493996 | None:intergenic |
| TCGCCGGAGATGGATTCGAG+TGG | 0.676446 | 8.3:-69493467 | None:intergenic |
| ACAGTTTACCACCACCGGAG+AGG | 0.677094 | 8.3:+69494183 | MS.gene051066:CDS |
| GAATTCAGCTCAGAAACGCG+TGG | 0.694751 | 8.3:-69494113 | None:intergenic |
| CCGCCTGTTTCACGTCCCAG+CGG | 0.702789 | 8.3:-69495720 | None:intergenic |
| GCGGTGTTGATTGAAGCGTG+GGG | 0.735042 | 8.3:+69493654 | MS.gene051066:CDS |
| AGTGGATCGAGTTAACCGAG+TGG | 0.771483 | 8.3:-69493449 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAAAAAAAAAGA+TGG | - | chr8.3:69495325-69495344 | None:intergenic | 10.0% |
| !!! | TTTTTTATAATTATTCTCTT+TGG | - | chr8.3:69494665-69494684 | None:intergenic | 10.0% |
| !! | ATATTAAGATAAATTATTCC+TGG | + | chr8.3:69495097-69495116 | MS.gene051066:intron | 15.0% |
| !! | TATTACATTTATGTACATTA+TGG | + | chr8.3:69495149-69495168 | MS.gene051066:intron | 15.0% |
| !! | AACTTGATTGTAGATATAAA+AGG | + | chr8.3:69495023-69495042 | MS.gene051066:intron | 20.0% |
| !! | GAAGGAAAAAAAAAGATAAA+GGG | + | chr8.3:69495059-69495078 | MS.gene051066:intron | 20.0% |
| !!! | AGAAAAAGTGTTAATGTTAA+TGG | + | chr8.3:69494443-69494462 | MS.gene051066:intron | 20.0% |
| !!! | TAATCTAAATGCTATTTTGA+TGG | + | chr8.3:69494952-69494971 | MS.gene051066:intron | 20.0% |
| ! | AATTGTTGTAGTTAACTTAG+AGG | + | chr8.3:69494629-69494648 | MS.gene051066:intron | 25.0% |
| ! | ATTGTTGTAGTTAACTTAGA+GGG | + | chr8.3:69494630-69494649 | MS.gene051066:intron | 25.0% |
| ! | CGAAGGAAAAAAAAAGATAA+AGG | + | chr8.3:69495058-69495077 | MS.gene051066:intron | 25.0% |
| ! | GTGTATGTGTTTAGTTATTA+TGG | + | chr8.3:69494589-69494608 | MS.gene051066:intron | 25.0% |
| !! | GGTTAAGAAGAAGTATAAAT+CGG | + | chr8.3:69493812-69493831 | MS.gene051066:CDS | 25.0% |
| !! | TTACACTGAATATCAGTTTT+CGG | - | chr8.3:69493777-69493796 | None:intergenic | 25.0% |
| ACACTGATAACAATTCAGAA+TGG | - | chr8.3:69494762-69494781 | None:intergenic | 30.0% | |
| AGGATCATATCTTTGTTGAT+AGG | + | chr8.3:69494784-69494803 | MS.gene051066:intron | 30.0% | |
| AGTGATGAATTCAAATTCGA+AGG | + | chr8.3:69494217-69494236 | MS.gene051066:CDS | 30.0% | |
| CTGAATTGTTATCAGTGTTA+AGG | + | chr8.3:69494764-69494783 | MS.gene051066:intron | 30.0% | |
| CTGATATTCAGTGTAAGAAT+CGG | + | chr8.3:69493781-69493800 | MS.gene051066:CDS | 30.0% | |
| GTGATGAATTCAAATTCGAA+GGG | + | chr8.3:69494218-69494237 | MS.gene051066:CDS | 30.0% | |
| TCGAATTTGACCATTCAAAA+AGG | - | chr8.3:69494995-69495014 | None:intergenic | 30.0% | |
| ! | GTACACTTTACCTTTTTGAA+TGG | + | chr8.3:69494982-69495001 | MS.gene051066:intron | 30.0% |
| AAAGGATTGATTGAACACGA+AGG | + | chr8.3:69495041-69495060 | MS.gene051066:intron | 35.0% | |
| AAATCGGAGAAAGCTAAGAT+CGG | + | chr8.3:69493828-69493847 | MS.gene051066:CDS | 35.0% | |
| AAGTTCCAAAACGAGAAGAA+CGG | + | chr8.3:69495442-69495461 | MS.gene051066:intron | 35.0% | |
| AATTCAAATTCGAAGGGTAG+AGG | + | chr8.3:69494224-69494243 | MS.gene051066:CDS | 35.0% | |
| ACTCAGGCAATTGTGAAATT+TGG | + | chr8.3:69494272-69494291 | MS.gene051066:CDS | 35.0% | |
| ATACCAACAGGAATTCCTAA+CGG | - | chr8.3:69493999-69494018 | None:intergenic | 35.0% | |
| CACTGTCACTGTTATTGTTA+TGG | - | chr8.3:69494526-69494545 | None:intergenic | 35.0% | |
| CGGTGACAGATAAAATTACA+AGG | + | chr8.3:69495392-69495411 | MS.gene051066:intron | 35.0% | |
| GAGATTTCACAGTTGAAACT+TGG | + | chr8.3:69494419-69494438 | MS.gene051066:intron | 35.0% | |
| GATCGGTTAGATCAGTTAAT+TGG | + | chr8.3:69493900-69493919 | MS.gene051066:CDS | 35.0% | |
| GTGTAAGAATCGGATTGATA+CGG | + | chr8.3:69493791-69493810 | MS.gene051066:CDS | 35.0% | |
| TTAAAACACAAAATTGCGCC+AGG | - | chr8.3:69495118-69495137 | None:intergenic | 35.0% | |
| ! | AGTCATAGCTTAAGCCATTT+TGG | - | chr8.3:69495505-69495524 | None:intergenic | 35.0% |
| ! | ATAGCTATGGGACTGAATTT+TGG | - | chr8.3:69495548-69495567 | None:intergenic | 35.0% |
| ! | GCAGTTTTTCATGAAAACTC+AGG | + | chr8.3:69494394-69494413 | MS.gene051066:CDS | 35.0% |
| ! | GTGAGTGATGTTTAGGTTTA+AGG | + | chr8.3:69494543-69494562 | MS.gene051066:intron | 35.0% |
| !! | GATGAAGTTTGCTAAGGATT+TGG | + | chr8.3:69494358-69494377 | MS.gene051066:CDS | 35.0% |
| !! | TATGACTCTGAAATCTAGTG+CGG | + | chr8.3:69495518-69495537 | MS.gene051066:intron | 35.0% |
| !!! | TTCTTCTCGTTTTGGAACTT+GGG | - | chr8.3:69495442-69495461 | None:intergenic | 35.0% |
| AAATTCGAAGGGTAGAGGTT+GGG | + | chr8.3:69494229-69494248 | MS.gene051066:CDS | 40.0% | |
| AGTGACAGTGAGTGATGTTT+AGG | + | chr8.3:69494536-69494555 | MS.gene051066:intron | 40.0% | |
| ATTACAAGGATGCCGCATAT+AGG | + | chr8.3:69495406-69495425 | MS.gene051066:intron | 40.0% | |
| CTGTGACAAATGACTGTTTC+CGG | - | chr8.3:69493967-69493986 | None:intergenic | 40.0% | |
| GAGGTTGCAGAGATTGTTAA+TGG | + | chr8.3:69493729-69493748 | MS.gene051066:CDS | 40.0% | |
| GCAGAGATTGTTAATGGAAG+AGG | + | chr8.3:69493735-69493754 | MS.gene051066:CDS | 40.0% | |
| GTACTTATGTGTCCTTACAG+AGG | + | chr8.3:69495275-69495294 | MS.gene051066:intron | 40.0% | |
| TACAATATCCCTCCTCTGTA+AGG | - | chr8.3:69495290-69495309 | None:intergenic | 40.0% | |
| TACCAAGAACCACTCCAAAA+TGG | + | chr8.3:69495488-69495507 | MS.gene051066:intron | 40.0% | |
| TCTCGCAAGACGATAAGAAA+CGG | + | chr8.3:69495372-69495391 | MS.gene051066:intron | 40.0% | |
| TGCAGAAGAATCATTCTCAG+CGG | + | chr8.3:69495200-69495219 | MS.gene051066:intron | 40.0% | |
| TGGTGAAGCTTATGAACAAG+CGG | + | chr8.3:69494292-69494311 | MS.gene051066:CDS | 40.0% | |
| TTATCGTCTTGCGAGAGTTT+CGG | - | chr8.3:69495368-69495387 | None:intergenic | 40.0% | |
| TTATGTGTCCTTACAGAGGA+GGG | + | chr8.3:69495279-69495298 | MS.gene051066:intron | 40.0% | |
| ! | AGGTATTTGGAATTGAGCAG+AGG | + | chr8.3:69493681-69493700 | MS.gene051066:CDS | 40.0% |
| ! | GGAATTTGAAGCAGAAGCAT+TGG | + | chr8.3:69493703-69493722 | MS.gene051066:CDS | 40.0% |
| ! | GGTATTTGGAATTGAGCAGA+GGG | + | chr8.3:69493682-69493701 | MS.gene051066:CDS | 40.0% |
| !! | GAGTGGTTCTTGGTAGTTTT+TGG | - | chr8.3:69495483-69495502 | None:intergenic | 40.0% |
| !! | TAGCTTAAGCCATTTTGGAG+TGG | - | chr8.3:69495500-69495519 | None:intergenic | 40.0% |
| !! | TGAAAAAGAAGCGTTGTCAC+CGG | + | chr8.3:69494151-69494170 | MS.gene051066:CDS | 40.0% |
| !!! | GGGTGTTTTTTCCTTATCCT+CGG | - | chr8.3:69495608-69495627 | None:intergenic | 40.0% |
| !!! | GTTCTTCTCGTTTTGGAACT+TGG | - | chr8.3:69495443-69495462 | None:intergenic | 40.0% |
| !!! | GTTTTTGGTGGCTATTGCTT+GGG | - | chr8.3:69495582-69495601 | None:intergenic | 40.0% |
| !!! | GTTTTTTCCTTATCCTCGGT+CGG | - | chr8.3:69495604-69495623 | None:intergenic | 40.0% |
| AATACGACACGTGGAAGCAA+CGG | + | chr8.3:69493594-69493613 | MS.gene051066:CDS | 45.0% | |
| AATTCGAAGGGTAGAGGTTG+GGG | + | chr8.3:69494230-69494249 | MS.gene051066:CDS | 45.0% | |
| ACCGGAAACACCACTAATCT+TGG | - | chr8.3:69493934-69493953 | None:intergenic | 45.0% | |
| ATCATAAAACCGCCAAGTGC+TGG | - | chr8.3:69493883-69493902 | None:intergenic | 45.0% | |
| ATGACTGTTTCCGGTATGAC+TGG | - | chr8.3:69493958-69493977 | None:intergenic | 45.0% | |
| CAAATTCGAAGGGTAGAGGT+TGG | + | chr8.3:69494228-69494247 | MS.gene051066:CDS | 45.0% | |
| CAGAAGAATCATTCTCAGCG+GGG | + | chr8.3:69495202-69495221 | MS.gene051066:intron | 45.0% | |
| CCACGTGTCGTATTCTGAAT+CGG | - | chr8.3:69493588-69493607 | None:intergenic | 45.0% | |
| CTTATGTGTCCTTACAGAGG+AGG | + | chr8.3:69495278-69495297 | MS.gene051066:intron | 45.0% | |
| GATGCTTGAGGCATAGCTAT+GGG | - | chr8.3:69495560-69495579 | None:intergenic | 45.0% | |
| GCAGAAGAATCATTCTCAGC+GGG | + | chr8.3:69495201-69495220 | MS.gene051066:intron | 45.0% | |
| GCCAAGATTAGTGGTGTTTC+CGG | + | chr8.3:69493930-69493949 | MS.gene051066:CDS | 45.0% | |
| GTTCCGTTAGGAATTCCTGT+TGG | + | chr8.3:69493993-69494012 | MS.gene051066:CDS | 45.0% | |
| TCACAGCAGAAAGTTCCGTT+AGG | + | chr8.3:69493981-69494000 | MS.gene051066:CDS | 45.0% | |
| TCTCAGCGGGGATTGAATTA+GGG | + | chr8.3:69495214-69495233 | MS.gene051066:intron | 45.0% | |
| TTCCAAAACGAGAAGAACGG+TGG | + | chr8.3:69495445-69495464 | MS.gene051066:intron | 45.0% | |
| TTCTCAGCGGGGATTGAATT+AGG | + | chr8.3:69495213-69495232 | MS.gene051066:intron | 45.0% | |
| ! | GCTATGGGACTGAATTTTGG+TGG | - | chr8.3:69495545-69495564 | None:intergenic | 45.0% |
| ! | GGCGATTTTACGCCTATATG+CGG | - | chr8.3:69495421-69495440 | None:intergenic | 45.0% |
| ! | TTCCACCGTTCTTCTCGTTT+TGG | - | chr8.3:69495450-69495469 | None:intergenic | 45.0% |
| !! | GAAGCAGAAGCATTGGAAAG+AGG | + | chr8.3:69493710-69493729 | MS.gene051066:CDS | 45.0% |
| !! | GCACTTGGCGGTTTTATGAT+CGG | + | chr8.3:69493883-69493902 | MS.gene051066:CDS | 45.0% |
| !! | GCAGAGGATGAAGTTTGCTA+AGG | + | chr8.3:69494352-69494371 | MS.gene051066:CDS | 45.0% |
| !!! | AGCCATTTTGGAGTGGTTCT+TGG | - | chr8.3:69495493-69495512 | None:intergenic | 45.0% |
| !!! | GGTTTTTGGTGGCTATTGCT+TGG | - | chr8.3:69495583-69495602 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTTTTGAAT+TGG | + | chr8.3:69495328-69495347 | MS.gene051066:intron | 5.0% |
| AAGCGACAGTTTACCACCAC+CGG | + | chr8.3:69494178-69494197 | MS.gene051066:CDS | 50.0% | |
| ACACCACTAATCTTGGCAGC+TGG | - | chr8.3:69493927-69493946 | None:intergenic | 50.0% | |
| ACTTTCGCTCTCTTCCTCTC+CGG | - | chr8.3:69494200-69494219 | None:intergenic | 50.0% | |
| AGTGGATCGAGTTAACCGAG+TGG | - | chr8.3:69493452-69493471 | None:intergenic | 50.0% | |
| CCAAAAACCGACCGAGGATA+AGG | + | chr8.3:69495594-69495613 | MS.gene051066:CDS | 50.0% | |
| CCGATTCAGAATACGACACG+TGG | + | chr8.3:69493585-69493604 | MS.gene051066:CDS | 50.0% | |
| GAATTCAGCTCAGAAACGCG+TGG | - | chr8.3:69494116-69494135 | None:intergenic | 50.0% | |
| GAGAAAGCTAAGATCGGTGC+TGG | + | chr8.3:69493834-69493853 | MS.gene051066:CDS | 50.0% | |
| GATCCACTCGAATCCATCTC+CGG | + | chr8.3:69493464-69493483 | MS.gene051066:CDS | 50.0% | |
| GATCGGTAGGATTTCGGTGA+CGG | + | chr8.3:69493524-69493543 | MS.gene051066:CDS | 50.0% | |
| GCTATTGCTTGGGATGCTTG+AGG | - | chr8.3:69495572-69495591 | None:intergenic | 50.0% | |
| GGATGCTTGAGGCATAGCTA+TGG | - | chr8.3:69495561-69495580 | None:intergenic | 50.0% | |
| GTGTTACAACCAGCACTTGG+CGG | + | chr8.3:69493871-69493890 | MS.gene051066:CDS | 50.0% | |
| GTTTCCGGTACCAGTCATAC+CGG | + | chr8.3:69493945-69493964 | MS.gene051066:CDS | 50.0% | |
| GTTTCCGGTATGACTGGTAC+CGG | - | chr8.3:69493952-69493971 | None:intergenic | 50.0% | |
| TGATAGTCCAGCAGCTGTTG+CGG | - | chr8.3:69495661-69495680 | None:intergenic | 50.0% | |
| ! | GGTAAACTGTCGCTTGACAC+CGG | - | chr8.3:69494173-69494192 | None:intergenic | 50.0% |
| ! | TAGGATTTCGGTGACGGTTG+CGG | + | chr8.3:69493530-69493549 | MS.gene051066:CDS | 50.0% |
| !! | AAAGCTAAGATCGGTGCTGG+AGG | + | chr8.3:69493837-69493856 | MS.gene051066:CDS | 50.0% |
| !! | CCTTATCCTCGGTCGGTTTT+TGG | - | chr8.3:69495597-69495616 | None:intergenic | 50.0% |
| !! | TATCCTCGGTCGGTTTTTGG+TGG | - | chr8.3:69495594-69495613 | None:intergenic | 50.0% |
| AAAACAGCCGCAACAGCTGC+TGG | + | chr8.3:69495651-69495670 | MS.gene051066:CDS | 55.0% | |
| AATGCATAGCTGTTCGCCGC+CGG | - | chr8.3:69493558-69493577 | None:intergenic | 55.0% | |
| ACAGAAAAGCCAGCACCGCT+GGG | + | chr8.3:69495705-69495724 | MS.gene051066:CDS | 55.0% | |
| ACAGTTTACCACCACCGGAG+AGG | + | chr8.3:69494183-69494202 | MS.gene051066:CDS | 55.0% | |
| GAAATCCTACCGATCGCTCC+CGG | - | chr8.3:69493519-69493538 | None:intergenic | 55.0% | |
| GGGAGCGATCGGTAGGATTT+CGG | + | chr8.3:69493518-69493537 | MS.gene051066:CDS | 55.0% | |
| GGTCCAGCTGCCAAGATTAG+TGG | + | chr8.3:69493921-69493940 | MS.gene051066:CDS | 55.0% | |
| TAGCCACCAAAAACCGACCG+AGG | + | chr8.3:69495588-69495607 | MS.gene051066:CDS | 55.0% | |
| TGACGACGACTCGATCCACT+CGG | + | chr8.3:69493434-69493453 | MS.gene051066:CDS | 55.0% | |
| TGATTGAAGCGTGGGGAGAG+AGG | + | chr8.3:69493661-69493680 | MS.gene051066:CDS | 55.0% | |
| TGGTGGAGATGGAGAAGCAG+AGG | + | chr8.3:69494336-69494355 | MS.gene051066:CDS | 55.0% | |
| TTGTTGGAGCGAAGCAGCGA+CGG | + | chr8.3:69493632-69493651 | MS.gene051066:CDS | 55.0% | |
| ! | TGCGGTGAGGGAATTGACTC+AGG | + | chr8.3:69494256-69494275 | MS.gene051066:CDS | 55.0% |
| !! | AGCGTGGGGAGAGAGGTATT+TGG | + | chr8.3:69493668-69493687 | MS.gene051066:CDS | 55.0% |
| !! | AGTGCTGGTTGTAACACCGC+CGG | - | chr8.3:69493868-69493887 | None:intergenic | 55.0% |
| !! | CAGCTGTTGCGGCTGTTTTC+AGG | - | chr8.3:69495650-69495669 | None:intergenic | 55.0% |
| !! | CGGCTGTTTTCAGGCAGGTA+CGG | - | chr8.3:69495641-69495660 | None:intergenic | 55.0% |
| !! | GCGGTGTTACAACCAGCACT+TGG | + | chr8.3:69493868-69493887 | MS.gene051066:CDS | 55.0% |
| !! | GCGGTGTTGATTGAAGCGTG+GGG | + | chr8.3:69493654-69493673 | MS.gene051066:CDS | 55.0% |
| !! | GGCGGTGTTGATTGAAGCGT+GGG | + | chr8.3:69493653-69493672 | MS.gene051066:CDS | 55.0% |
| !! | TGTTGCGGCTGTTTTCAGGC+AGG | - | chr8.3:69495646-69495665 | None:intergenic | 55.0% |
| ACACGTGGAAGCAACGGTGG+AGG | + | chr8.3:69493600-69493619 | MS.gene051066:CDS | 60.0% | |
| ACGACACGTGGAAGCAACGG+TGG | + | chr8.3:69493597-69493616 | MS.gene051066:CDS | 60.0% | |
| AGGCAGGTACGGCTGCAGTT+TGG | - | chr8.3:69495630-69495649 | None:intergenic | 60.0% | |
| CACAGAAAAGCCAGCACCGC+TGG | + | chr8.3:69495704-69495723 | MS.gene051066:CDS | 60.0% | |
| CACGTGGAAGCAACGGTGGA+GGG | + | chr8.3:69493601-69493620 | MS.gene051066:CDS | 60.0% | |
| CCTGTTGGTATTCGCGCCTC+TGG | + | chr8.3:69494008-69494027 | MS.gene051066:CDS | 60.0% | |
| GACGTCGAAGTTGCAGCAGG+TGG | + | chr8.3:69494316-69494335 | MS.gene051066:CDS | 60.0% | |
| GCAGGTACGGCTGCAGTTTG+GGG | - | chr8.3:69495628-69495647 | None:intergenic | 60.0% | |
| GGAGACGTCGAAGTTGCAGC+AGG | + | chr8.3:69494313-69494332 | MS.gene051066:CDS | 60.0% | |
| GGAGATGGAGAACCACTCGC+CGG | - | chr8.3:69493486-69493505 | None:intergenic | 60.0% | |
| GGCAGGTACGGCTGCAGTTT+GGG | - | chr8.3:69495629-69495648 | None:intergenic | 60.0% | |
| GGCGAGTGGTTCTCCATCTC+CGG | + | chr8.3:69493485-69493504 | MS.gene051066:CDS | 60.0% | |
| GGGTAGAGGTTGGGGAAGTG+CGG | + | chr8.3:69494238-69494257 | MS.gene051066:CDS | 60.0% | |
| GTCGAAGTTGCAGCAGGTGG+TGG | + | chr8.3:69494319-69494338 | MS.gene051066:CDS | 60.0% | |
| GTGGAGGGAGGGAGGATTGT+TGG | + | chr8.3:69493616-69493635 | MS.gene051066:CDS | 60.0% | |
| TCGAATCCATCTCCGGCGAG+TGG | + | chr8.3:69493471-69493490 | MS.gene051066:CDS | 60.0% | |
| TGGAAGCAACGGTGGAGGGA+GGG | + | chr8.3:69493605-69493624 | MS.gene051066:CDS | 60.0% | |
| TTCGCTCTCTTCCTCTCCGG+TGG | - | chr8.3:69494197-69494216 | None:intergenic | 60.0% | |
| ! | AGGTTGGGGAAGTGCGGTGA+GGG | + | chr8.3:69494244-69494263 | MS.gene051066:CDS | 60.0% |
| ! | ATTCGCGCCTCTAGCTCCAG+AGG | - | chr8.3:69494027-69494046 | None:intergenic | 60.0% |
| ! | CCAGAGGCGCGAATACCAAC+AGG | - | chr8.3:69494011-69494030 | None:intergenic | 60.0% |
| ! | TCGCCGGAGATGGATTCGAG+TGG | - | chr8.3:69493470-69493489 | None:intergenic | 60.0% |
| !! | ATTCGCGCCTCTGGAGCTAG+AGG | + | chr8.3:69494017-69494036 | MS.gene051066:CDS | 60.0% |
| !! | CGGCGGTGTTGATTGAAGCG+TGG | + | chr8.3:69493652-69493671 | MS.gene051066:CDS | 60.0% |
| !! | GCTAAGATCGGTGCTGGAGG+TGG | + | chr8.3:69493840-69493859 | MS.gene051066:CDS | 60.0% |
| !! | GTTGCAGCAGGTGGTGGAGA+TGG | + | chr8.3:69494325-69494344 | MS.gene051066:CDS | 60.0% |
| !! | TCCATCTCCGGTGTCGTCTC+CGG | + | chr8.3:69493497-69493516 | MS.gene051066:CDS | 60.0% |
| !!! | CAGCGGTGCTGGCTTTTCTG+TGG | - | chr8.3:69495706-69495725 | None:intergenic | 60.0% |
| AAGCAACGGTGGAGGGAGGG+AGG | + | chr8.3:69493608-69493627 | MS.gene051066:CDS | 65.0% | |
| ATCGCTCCCGGAGACGACAC+CGG | - | chr8.3:69493507-69493526 | None:intergenic | 65.0% | |
| GCTCTCTTCCTCTCCGGTGG+TGG | - | chr8.3:69494194-69494213 | None:intergenic | 65.0% | |
| GGAGAACCACTCGCCGGAGA+TGG | - | chr8.3:69493480-69493499 | None:intergenic | 65.0% | |
| GTGGAAGCAACGGTGGAGGG+AGG | + | chr8.3:69493604-69493623 | MS.gene051066:CDS | 65.0% | |
| GTGTCGTCTCCGGGAGCGAT+CGG | + | chr8.3:69493507-69493526 | MS.gene051066:CDS | 65.0% | |
| TTGGAGCGAAGCAGCGACGG+CGG | + | chr8.3:69493635-69493654 | MS.gene051066:CDS | 65.0% | |
| ! | GAGGTTGGGGAAGTGCGGTG+AGG | + | chr8.3:69494243-69494262 | MS.gene051066:CDS | 65.0% |
| ! | TTCGGTGACGGTTGCGGCAC+CGG | + | chr8.3:69493536-69493555 | MS.gene051066:CDS | 65.0% |
| !! | ATCGGTGCTGGAGGTGGCTC+CGG | + | chr8.3:69493846-69493865 | MS.gene051066:CDS | 65.0% |
| !! | CCATCTCCGGTGTCGTCTCC+GGG | + | chr8.3:69493498-69493517 | MS.gene051066:CDS | 65.0% |
| CCCGGAGACGACACCGGAGA+TGG | - | chr8.3:69493501-69493520 | None:intergenic | 70.0% | |
| CGTCTCCGGGAGCGATCGGT+AGG | + | chr8.3:69493511-69493530 | MS.gene051066:CDS | 70.0% | |
| ! | GGTGACGGTTGCGGCACCGG+CGG | + | chr8.3:69493539-69493558 | MS.gene051066:CDS | 75.0% |
| ! | GGTGCTGGAGGTGGCTCCGG+CGG | + | chr8.3:69493849-69493868 | MS.gene051066:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 69493429 | 69495733 | 69493429 | ID=MS.gene051066 |
| chr8.3 | mRNA | 69493429 | 69495733 | 69493429 | ID=MS.gene051066.t1;Parent=MS.gene051066 |
| chr8.3 | exon | 69493429 | 69494415 | 69493429 | ID=MS.gene051066.t1.exon1;Parent=MS.gene051066.t1 |
| chr8.3 | CDS | 69493429 | 69494415 | 69493429 | ID=cds.MS.gene051066.t1;Parent=MS.gene051066.t1 |
| chr8.3 | exon | 69495536 | 69495733 | 69495536 | ID=MS.gene051066.t1.exon2;Parent=MS.gene051066.t1 |
| chr8.3 | CDS | 69495536 | 69495733 | 69495536 | ID=cds.MS.gene051066.t1;Parent=MS.gene051066.t1 |
| Gene Sequence |
| Protein sequence |
