Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49074.t1 | RHN62911.1 | 96.1 | 381 | 15 | 0 | 1 | 381 | 1 | 381 | 4.70E-215 | 757.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49074.t1 | Q9M2Z5 | 68.6 | 299 | 92 | 2 | 390 | 686 | 11 | 309 | 1.6e-118 | 428.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49074.t1 | A0A396IDJ9 | 96.1 | 381 | 15 | 0 | 1 | 381 | 1 | 381 | 3.4e-215 | 757.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049217 | MS.gene49074 | -0.802687 | 4.98E-49 | -1.69E-46 |
MS.gene050444 | MS.gene49074 | -0.811661 | 6.26E-51 | -1.69E-46 |
MS.gene051666 | MS.gene49074 | -0.832917 | 7.19E-56 | -1.69E-46 |
MS.gene055206 | MS.gene49074 | -0.801666 | 8.08E-49 | -1.69E-46 |
MS.gene057926 | MS.gene49074 | -0.80255 | 5.32E-49 | -1.69E-46 |
MS.gene05934 | MS.gene49074 | -0.81486 | 1.24E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49074.t1 | MTR_1g100697 | 99.344 | 305 | 2 | 0 | 382 | 686 | 1 | 305 | 0.0 | 624 |
MS.gene49074.t1 | MTR_1g100707 | 91.475 | 305 | 26 | 0 | 382 | 686 | 1 | 305 | 0.0 | 576 |
MS.gene49074.t1 | MTR_1g100713 | 53.628 | 317 | 143 | 1 | 374 | 686 | 2 | 318 | 6.53e-107 | 327 |
MS.gene49074.t1 | MTR_0013s0100 | 51.438 | 313 | 144 | 4 | 379 | 686 | 6 | 315 | 1.23e-100 | 311 |
MS.gene49074.t1 | MTR_4g099030 | 46.497 | 314 | 155 | 2 | 374 | 686 | 2 | 303 | 3.23e-93 | 291 |
MS.gene49074.t1 | MTR_7g074410 | 34.812 | 293 | 186 | 2 | 393 | 685 | 13 | 300 | 1.26e-49 | 176 |
MS.gene49074.t1 | MTR_7g074430 | 32.441 | 299 | 197 | 2 | 387 | 685 | 7 | 300 | 3.97e-47 | 169 |
MS.gene49074.t1 | MTR_7g075970 | 34.333 | 300 | 168 | 7 | 398 | 685 | 13 | 295 | 6.36e-41 | 151 |
MS.gene49074.t1 | MTR_1g029330 | 32.313 | 294 | 193 | 4 | 393 | 685 | 13 | 301 | 7.40e-38 | 143 |
MS.gene49074.t1 | MTR_2g018940 | 29.289 | 239 | 143 | 7 | 385 | 614 | 18 | 239 | 1.12e-15 | 79.3 |
MS.gene49074.t1 | MTR_2g018910 | 28.151 | 238 | 143 | 7 | 387 | 614 | 23 | 242 | 2.22e-15 | 78.2 |
MS.gene49074.t1 | MTR_8g091730 | 26.050 | 238 | 157 | 5 | 384 | 613 | 15 | 241 | 3.38e-15 | 77.4 |
MS.gene49074.t1 | MTR_4g120840 | 36.082 | 97 | 62 | 0 | 104 | 200 | 10 | 106 | 2.07e-13 | 67.4 |
MS.gene49074.t1 | MTR_2g018950 | 27.530 | 247 | 145 | 6 | 385 | 614 | 17 | 246 | 8.39e-13 | 70.5 |
MS.gene49074.t1 | MTR_5g034530 | 49.180 | 61 | 31 | 0 | 262 | 322 | 17 | 77 | 7.58e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49074.t1 | AT3G48880 | 68.562 | 299 | 92 | 2 | 390 | 686 | 11 | 309 | 8.98e-147 | 429 |
MS.gene49074.t1 | AT3G48880 | 68.562 | 299 | 92 | 2 | 390 | 686 | 11 | 309 | 8.98e-147 | 429 |
MS.gene49074.t1 | AT3G48880 | 68.562 | 299 | 92 | 2 | 390 | 686 | 11 | 309 | 8.98e-147 | 429 |
MS.gene49074.t1 | AT3G42170 | 28.133 | 391 | 256 | 7 | 7 | 373 | 17 | 406 | 1.59e-40 | 158 |
MS.gene49074.t1 | AT3G42170 | 28.133 | 391 | 256 | 7 | 7 | 373 | 39 | 428 | 1.69e-40 | 158 |
MS.gene49074.t1 | AT4G11580 | 29.532 | 342 | 188 | 11 | 382 | 684 | 4 | 331 | 2.86e-30 | 122 |
MS.gene49074.t1 | AT1G18560 | 20.588 | 408 | 305 | 9 | 1 | 397 | 21 | 420 | 6.69e-15 | 79.0 |
Find 141 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCACAAAAGGTTCAATATA+AGG | 0.204273 | 1.3:+69578776 | MS.gene49074:CDS |
CTTCAGTGAACTTAAGATTA+TGG | 0.219978 | 1.3:+69582948 | MS.gene49074:CDS |
AGGCTCAAGACTCTCAATTT+TGG | 0.223803 | 1.3:-69583015 | None:intergenic |
ACAAGTATGAGGAAGGATTT+TGG | 0.237709 | 1.3:+69583289 | MS.gene49074:CDS |
GCAATTTCCTCTAGAAAATA+TGG | 0.237803 | 1.3:-69582910 | None:intergenic |
ATGTTCAAGCTTCCTCTTCT+AGG | 0.247237 | 1.3:+69578727 | MS.gene49074:CDS |
CATGTCAACATTTGCATTGT+TGG | 0.247930 | 1.3:+69578869 | MS.gene49074:CDS |
TATGCCTGATGGTTTACTTA+TGG | 0.258046 | 1.3:+69578593 | MS.gene49074:CDS |
CTTGCTGTGATCCACTTCTT+TGG | 0.265127 | 1.3:+69582162 | MS.gene49074:CDS |
ATGCCTGATGGTTTACTTAT+GGG | 0.278336 | 1.3:+69578594 | MS.gene49074:CDS |
TCAAGGAAATCTTCAATAAT+CGG | 0.286560 | 1.3:-69582280 | None:intergenic |
TTTGCCTAACCACTGACTTT+TGG | 0.298617 | 1.3:+69578337 | MS.gene49074:CDS |
GTGGAATTGTTTGACTGCTT+GGG | 0.302653 | 1.3:+69578491 | MS.gene49074:CDS |
TTCAGTGAACTTAAGATTAT+GGG | 0.333603 | 1.3:+69582949 | MS.gene49074:CDS |
CGCGCAATCGAGAAGCCTTC+TGG | 0.341689 | 1.3:-69583191 | None:intergenic |
CCACAAAAGGTTCAATATAA+GGG | 0.351055 | 1.3:+69578777 | MS.gene49074:CDS |
AAGACATATAGCTATAGTTT+TGG | 0.359955 | 1.3:-69578368 | None:intergenic |
ACGTAAACAAAAGGCTCTAA+TGG | 0.360702 | 1.3:-69582230 | None:intergenic |
GACATATTCGAGTTAACTTC+TGG | 0.361591 | 1.3:+69582107 | MS.gene49074:CDS |
TATATCACATTGCATTCTAA+TGG | 0.362218 | 1.3:+69583110 | MS.gene49074:CDS |
CACTCACGTACAAGTTGAAA+TGG | 0.379756 | 1.3:-69582337 | None:intergenic |
TTCGGTGTTCAACGCTATAT+AGG | 0.386217 | 1.3:+69583037 | MS.gene49074:CDS |
TTCATGCTCAACAGCAGATA+TGG | 0.389214 | 1.3:+69578068 | MS.gene49074:CDS |
CACGAGGAGATGGGAGGATC+TGG | 0.389695 | 1.3:+69582049 | MS.gene49074:CDS |
TTCTGAGAGGGAGGAGGTAA+TGG | 0.392684 | 1.3:-69577871 | None:intergenic |
TGCTCTGATGTTTCAGAGGT+TGG | 0.393852 | 1.3:-69577817 | None:intergenic |
GGATCTGGACACAGATATAT+TGG | 0.398991 | 1.3:+69582064 | MS.gene49074:CDS |
TCCACCTTGTTTCAATATCT+AGG | 0.400049 | 1.3:-69578809 | None:intergenic |
TGTGGAATTGTTTGACTGCT+TGG | 0.400753 | 1.3:+69578490 | MS.gene49074:CDS |
TAAGTAAACCATCAGGCATA+AGG | 0.411898 | 1.3:-69578590 | None:intergenic |
AATCTCAAAGTTTGATCAAA+TGG | 0.421163 | 1.3:+69578107 | MS.gene49074:CDS |
TGTGCAAGGCAATCCGTTGC+TGG | 0.424432 | 1.3:+69582845 | MS.gene49074:CDS |
ACTCATTCTGCTCAGATTCA+AGG | 0.426417 | 1.3:-69582297 | None:intergenic |
TCATGATCCACCTTTCTAAA+GGG | 0.430243 | 1.3:-69578174 | None:intergenic |
AATTGAGAGTCTTGAGCCTT+CGG | 0.435748 | 1.3:+69583019 | MS.gene49074:CDS |
CAAGGAAATCTTCAATAATC+GGG | 0.435917 | 1.3:-69582279 | None:intergenic |
GAACTGATGAAGGGATAGTT+AGG | 0.442152 | 1.3:+69583262 | MS.gene49074:CDS |
AACGACTGGTTCTTCCGGCT+TGG | 0.442940 | 1.3:+69582800 | MS.gene49074:CDS |
GGAGGTAATGGATTGGCAGC+AGG | 0.444281 | 1.3:-69577859 | None:intergenic |
TTGTTTCGAACACGAGGAGA+TGG | 0.448455 | 1.3:+69582039 | MS.gene49074:CDS |
GCTCAAACGACTGGTTCTTC+CGG | 0.448751 | 1.3:+69582795 | MS.gene49074:CDS |
AGTTAGGTGGTACAAGTATG+AGG | 0.451024 | 1.3:+69583278 | MS.gene49074:CDS |
CCGCTAAACTTTATCTCCTT+AGG | 0.453633 | 1.3:-69577973 | None:intergenic |
TGGAATTGTTTGACTGCTTG+GGG | 0.456770 | 1.3:+69578492 | MS.gene49074:CDS |
TGGAACAGAATTAAAAGAAC+AGG | 0.456792 | 1.3:+69582820 | MS.gene49074:CDS |
TTGCTCATGTTTGTAGCGCA+TGG | 0.458078 | 1.3:+69582132 | MS.gene49074:CDS |
TTCATGATCCACCTTTCTAA+AGG | 0.462146 | 1.3:-69578175 | None:intergenic |
ATGGAACTTCGAAGAGCATT+GGG | 0.465356 | 1.3:+69578126 | MS.gene49074:CDS |
CGATTCTTGCGTTTCTGAGA+GGG | 0.465429 | 1.3:-69577883 | None:intergenic |
TGAAACACAAAGAGGAAGAT+AGG | 0.469476 | 1.3:+69578025 | MS.gene49074:CDS |
GCAAACTCTACCACAATGTT+GGG | 0.472306 | 1.3:-69578319 | None:intergenic |
TTCTAGGTTACAAAGATTCA+AGG | 0.472855 | 1.3:+69578743 | MS.gene49074:CDS |
TCGGTGTTCAACGCTATATA+GGG | 0.478065 | 1.3:+69583038 | MS.gene49074:CDS |
TCTTGAGCTTCCCTTTAGAA+AGG | 0.481618 | 1.3:+69578164 | MS.gene49074:CDS |
AGGAACAAGAAACAGAAATC+AGG | 0.484626 | 1.3:+69578045 | MS.gene49074:CDS |
TTAAATTTAATCGTGAAAGA+AGG | 0.487757 | 1.3:+69578654 | MS.gene49074:CDS |
AAGTAAACCATCAGGCATAA+GGG | 0.490847 | 1.3:-69578589 | None:intergenic |
CGAGTTCAATGAGAAATCAT+TGG | 0.493660 | 1.3:+69578001 | MS.gene49074:CDS |
CTATAGCTATATGTCTTTGA+CGG | 0.494473 | 1.3:+69578374 | MS.gene49074:CDS |
TCTTAAATTGTGGTATTCCA+AGG | 0.495255 | 1.3:-69578218 | None:intergenic |
ATTTCAGAAAACAGGCGTAA+TGG | 0.497325 | 1.3:+69582010 | MS.gene49074:intron |
CACGTGACATCTTGCAAATG+TGG | 0.499704 | 1.3:+69578262 | MS.gene49074:CDS |
GGCAAACTCTACCACAATGT+TGG | 0.500386 | 1.3:-69578320 | None:intergenic |
CTTCATCAGTTCTTGTACGT+TGG | 0.501934 | 1.3:-69583251 | None:intergenic |
AATGCATCATCTAATGATGT+TGG | 0.501960 | 1.3:+69578546 | MS.gene49074:CDS |
CTAAATGTTCTAAGCTGTCT+AGG | 0.503752 | 1.3:-69583077 | None:intergenic |
AAAGAGTTACGGAAAGGAAA+AGG | 0.504928 | 1.3:+69578915 | MS.gene49074:CDS |
ATACATATGTCAAAGAGTTA+CGG | 0.511482 | 1.3:+69578904 | MS.gene49074:CDS |
CGTTCATCAACGTAAACAAA+AGG | 0.517545 | 1.3:-69582239 | None:intergenic |
AAGTCCAAAAGTCAGTGGTT+AGG | 0.518029 | 1.3:-69578341 | None:intergenic |
AATGGAACTTCGAAGAGCAT+TGG | 0.519914 | 1.3:+69578125 | MS.gene49074:CDS |
GCATTGGGTAAAGTGTTCAT+AGG | 0.524252 | 1.3:+69578141 | MS.gene49074:CDS |
GAACCAGTCGTTTGAGCTGT+GGG | 0.524995 | 1.3:-69582789 | None:intergenic |
AATGGATTGGCAGCAGGGGT+AGG | 0.525861 | 1.3:-69577853 | None:intergenic |
TGTTTCGAACACGAGGAGAT+GGG | 0.527745 | 1.3:+69582040 | MS.gene49074:CDS |
AATCGTGAAAGAAGGTCTAA+AGG | 0.529723 | 1.3:+69578662 | MS.gene49074:CDS |
TGTTTGTAGCGCATGGCGCA+TGG | 0.531694 | 1.3:+69582139 | MS.gene49074:CDS |
GCAAGAATCGCTCAGAAGCA+TGG | 0.536724 | 1.3:+69577896 | MS.gene49074:CDS |
TGAGCTTCCCTTTAGAAAGG+TGG | 0.537557 | 1.3:+69578167 | MS.gene49074:CDS |
TCACTTTATAGTTGTTTCAG+AGG | 0.538444 | 1.3:+69577921 | MS.gene49074:CDS |
CCTCCCATAAGTAAACCATC+AGG | 0.539028 | 1.3:-69578597 | None:intergenic |
AGGCCACTCAGGAGATGTAA+TGG | 0.540037 | 1.3:+69578458 | MS.gene49074:CDS |
TGATTCTACTATTCGCCAGA+AGG | 0.543301 | 1.3:+69583176 | MS.gene49074:CDS |
ACGTGACATCTTGCAAATGT+GGG | 0.544677 | 1.3:+69578263 | MS.gene49074:CDS |
AGGTGGTACAAGTATGAGGA+AGG | 0.544931 | 1.3:+69583282 | MS.gene49074:CDS |
AAAATGTATTTACTGTCCTA+AGG | 0.544969 | 1.3:+69577957 | MS.gene49074:CDS |
TATTGTCTGCTTAAAGTGCA+AGG | 0.545483 | 1.3:-69583332 | None:intergenic |
GGCATGCATTGATCCACAAA+AGG | 0.545755 | 1.3:+69578764 | MS.gene49074:CDS |
AATCCGTTGCTGGAAAGAGC+TGG | 0.549877 | 1.3:+69582855 | MS.gene49074:CDS |
GAATCTTTGTAACCTAGAAG+AGG | 0.550846 | 1.3:-69578739 | None:intergenic |
CAAGAATCGCTCAGAAGCAT+GGG | 0.551248 | 1.3:+69577897 | MS.gene49074:CDS |
TGTCAAGTGTCAGGCCACTC+AGG | 0.551931 | 1.3:+69578447 | MS.gene49074:CDS |
GAGGTAATGGATTGGCAGCA+GGG | 0.552436 | 1.3:-69577858 | None:intergenic |
CAACGTACAAGAACTGATGA+AGG | 0.552652 | 1.3:+69583252 | MS.gene49074:CDS |
CTCATGCTCTGATGTTTCAG+AGG | 0.556060 | 1.3:-69577821 | None:intergenic |
TTGCGTTTCTGAGAGGGAGG+AGG | 0.558430 | 1.3:-69577877 | None:intergenic |
CTTTATAGTTGTTTCAGAGG+AGG | 0.559813 | 1.3:+69577924 | MS.gene49074:CDS |
AGAACCAGTCGTTTGAGCTG+TGG | 0.570755 | 1.3:-69582790 | None:intergenic |
GCGCGAATTTATCACATGCA+TGG | 0.572175 | 1.3:+69583209 | MS.gene49074:CDS |
CTCTACCACAATGTTGGGAA+AGG | 0.572623 | 1.3:-69578314 | None:intergenic |
ACTCCAGCTCTTTCCAGCAA+CGG | 0.573617 | 1.3:-69582858 | None:intergenic |
ATTGTCTGCTTAAAGTGCAA+GGG | 0.579397 | 1.3:-69583331 | None:intergenic |
TTCTTGCGTTTCTGAGAGGG+AGG | 0.580146 | 1.3:-69577880 | None:intergenic |
TCAAGCGTCTTCCAAAGAAG+TGG | 0.580522 | 1.3:-69582173 | None:intergenic |
TTTCCTCTAGAAAATATGGC+GGG | 0.587537 | 1.3:-69582906 | None:intergenic |
AGAGGGAGGAGGTAATGGAT+TGG | 0.593025 | 1.3:-69577866 | None:intergenic |
GCGATTCTTGCGTTTCTGAG+AGG | 0.594877 | 1.3:-69577884 | None:intergenic |
CTCTGAAACATCAGAGCATG+AGG | 0.600109 | 1.3:+69577822 | MS.gene49074:CDS |
TGCTCAACAGCAGATATGGA+AGG | 0.600684 | 1.3:+69578072 | MS.gene49074:CDS |
CCTAAGGAGATAAAGTTTAG+CGG | 0.601562 | 1.3:+69577973 | MS.gene49074:CDS |
AGGTAATGGATTGGCAGCAG+GGG | 0.602711 | 1.3:-69577857 | None:intergenic |
TATGGCGGGTTTGCTATACT+AGG | 0.604329 | 1.3:-69582892 | None:intergenic |
GTGCCCACAGCTCAAACGAC+TGG | 0.606234 | 1.3:+69582786 | MS.gene49074:CDS |
CGTGATAATGTAGTGCGTGA+GGG | 0.608708 | 1.3:-69578243 | None:intergenic |
CCTGATGGTTTACTTATGGG+AGG | 0.612356 | 1.3:+69578597 | MS.gene49074:CDS |
AGGAGATGTAATGGCTCAGA+CGG | 0.616632 | 1.3:+69578467 | MS.gene49074:CDS |
CGTGAGGGAATCTTAAATTG+TGG | 0.619762 | 1.3:-69578228 | None:intergenic |
TATATAGCGTTGAACACCGA+AGG | 0.621770 | 1.3:-69583035 | None:intergenic |
TAAAAGAACAGGAATGTGCA+AGG | 0.624054 | 1.3:+69582831 | MS.gene49074:CDS |
TCAGTGAACTTAAGATTATG+GGG | 0.624457 | 1.3:+69582950 | MS.gene49074:CDS |
ATGTAATGGCTCAGACGGTG+TGG | 0.626721 | 1.3:+69578472 | MS.gene49074:CDS |
AGTTGACATACACTGCTGAA+AGG | 0.630322 | 1.3:+69582366 | MS.gene49074:CDS |
AAGACGTTGTTTCGAACACG+AGG | 0.632817 | 1.3:+69582033 | MS.gene49074:CDS |
GCAAGAAGTCCAAAAGTCAG+TGG | 0.635325 | 1.3:-69578346 | None:intergenic |
AAGGAGATAAAGTTTAGCGG+TGG | 0.637012 | 1.3:+69577976 | MS.gene49074:CDS |
TATGTCAAAGAGTTACGGAA+AGG | 0.637067 | 1.3:+69578909 | MS.gene49074:CDS |
GCTCAACAGCAGATATGGAA+GGG | 0.640338 | 1.3:+69578073 | MS.gene49074:CDS |
ACATTCCTTTCCCAACATTG+TGG | 0.641768 | 1.3:+69578309 | MS.gene49074:CDS |
CGTGACATCTTGCAAATGTG+GGG | 0.648706 | 1.3:+69578264 | MS.gene49074:CDS |
GGAATTGTTTGACTGCTTGG+GGG | 0.649204 | 1.3:+69578493 | MS.gene49074:CDS |
TTCGAACACGAGGAGATGGG+AGG | 0.657865 | 1.3:+69582043 | MS.gene49074:CDS |
ACCTAGATATTGAAACAAGG+TGG | 0.659735 | 1.3:+69578808 | MS.gene49074:CDS |
AACGTACAAGAACTGATGAA+GGG | 0.659917 | 1.3:+69583253 | MS.gene49074:CDS |
GAGCCATTACATCTCCTGAG+TGG | 0.664222 | 1.3:-69578461 | None:intergenic |
CTGATGAAGGGATAGTTAGG+TGG | 0.665188 | 1.3:+69583265 | MS.gene49074:CDS |
ATTTCCTCTAGAAAATATGG+CGG | 0.666839 | 1.3:-69582907 | None:intergenic |
ACGTGATAATGTAGTGCGTG+AGG | 0.668828 | 1.3:-69578244 | None:intergenic |
TGAGGATTCGTGGTGCAGTG+AGG | 0.678939 | 1.3:+69578703 | MS.gene49074:CDS |
GAAGCAAAGAAGATGTCACA+TGG | 0.687775 | 1.3:-69582973 | None:intergenic |
TCAACCTAGATATTGAAACA+AGG | 0.694106 | 1.3:+69578805 | MS.gene49074:CDS |
TCATTGGCTGAAACACAAAG+AGG | 0.704462 | 1.3:+69578017 | MS.gene49074:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAACAATAAG+TGG | - | chr1.3:69581550-69581569 | None:intergenic | 10.0% |
!!! | AAATTAGAATTTTTTGTATT+AGG | + | chr1.3:69581603-69581622 | MS.gene49074:intron | 10.0% |
!!! | AAGATTTATTTAGTTTTTTT+TGG | + | chr1.3:69579113-69579132 | MS.gene49074:intron | 10.0% |
!!! | TATTACGTTTATTTTTTTAA+CGG | - | chr1.3:69579603-69579622 | None:intergenic | 10.0% |
!!! | TTATCTTTTTATTAATAATG+TGG | - | chr1.3:69580943-69580962 | None:intergenic | 10.0% |
!!! | TTTTCTAAACATTTATAATT+TGG | - | chr1.3:69580765-69580784 | None:intergenic | 10.0% |
!! | AAACAATTTATAATTTAGGA+TGG | + | chr1.3:69581036-69581055 | MS.gene49074:intron | 15.0% |
!! | AACAATGCATAATATATATA+AGG | + | chr1.3:69580683-69580702 | MS.gene49074:intron | 15.0% |
!! | AATATATTTAGAGAGATTAA+TGG | + | chr1.3:69582404-69582423 | MS.gene49074:intron | 15.0% |
!! | ACTCAAACAATTTATAATTT+AGG | + | chr1.3:69581032-69581051 | MS.gene49074:intron | 15.0% |
!! | TTGTATAATAGTAGAAAATA+TGG | + | chr1.3:69580313-69580332 | MS.gene49074:intron | 15.0% |
!!! | AAAATGTTAACTACTATTTT+AGG | + | chr1.3:69580660-69580679 | MS.gene49074:intron | 15.0% |
!!! | AATAGTAGTTAACATTTTAT+CGG | - | chr1.3:69580658-69580677 | None:intergenic | 15.0% |
!!! | AATGGAAAATTAGTTTTTTT+TGG | + | chr1.3:69579313-69579332 | MS.gene49074:intron | 15.0% |
!!! | ATGTATCTAGTTTATATTAT+AGG | - | chr1.3:69580443-69580462 | None:intergenic | 15.0% |
!!! | CTCTAAATATATTTTAAAGT+TGG | - | chr1.3:69582397-69582416 | None:intergenic | 15.0% |
!!! | TAAAAAAACTGATTTAAAAC+CGG | + | chr1.3:69579362-69579381 | MS.gene49074:intron | 15.0% |
!!! | TCAATTTTGTCAAATATTAT+AGG | - | chr1.3:69580156-69580175 | None:intergenic | 15.0% |
!!! | TTATTTTTGAAAAGATAATG+CGG | + | chr1.3:69582678-69582697 | MS.gene49074:intron | 15.0% |
!!! | TTGATAATTTTTTTATGTTG+AGG | - | chr1.3:69583150-69583169 | None:intergenic | 15.0% |
!!! | TTTAGAATTTGCAAAAAAAA+TGG | + | chr1.3:69579295-69579314 | MS.gene49074:intron | 15.0% |
!!! | TTTTTATTAATAATGTGGAA+AGG | - | chr1.3:69580938-69580957 | None:intergenic | 15.0% |
!! | AAACAGAAAGAATATATTTG+TGG | - | chr1.3:69580106-69580125 | None:intergenic | 20.0% |
!! | AAGGATTCTATAATTAGAAA+AGG | - | chr1.3:69580066-69580085 | None:intergenic | 20.0% |
!! | TTAAACATAAACCTAAAAAC+TGG | - | chr1.3:69581926-69581945 | None:intergenic | 20.0% |
!! | TTAAATTTAATCGTGAAAGA+AGG | + | chr1.3:69578654-69578673 | MS.gene49074:CDS | 20.0% |
!!! | AATTAGTTTTTTTTGGAAAC+TGG | + | chr1.3:69579320-69579339 | MS.gene49074:intron | 20.0% |
!!! | ACTTCTTCTTCTTTTTTTAA+GGG | - | chr1.3:69579704-69579723 | None:intergenic | 20.0% |
!!! | AGTAGTCAACATTTTTTTTT+TGG | - | chr1.3:69580730-69580749 | None:intergenic | 20.0% |
!!! | ATAATTTTTTTATGTTGAGG+AGG | - | chr1.3:69583147-69583166 | None:intergenic | 20.0% |
!!! | ATACTTTGCTTCTATTTTTA+GGG | - | chr1.3:69579677-69579696 | None:intergenic | 20.0% |
!!! | ATTTGTTAATCTCTTAACTT+TGG | + | chr1.3:69581828-69581847 | MS.gene49074:intron | 20.0% |
!!! | ATTTGTTATGATTTCATTGA+TGG | - | chr1.3:69580026-69580045 | None:intergenic | 20.0% |
!!! | CAAAATTACACATTTTCAAA+TGG | + | chr1.3:69580352-69580371 | MS.gene49074:intron | 20.0% |
!!! | CAGTTTTTTTATTCAAAATC+CGG | - | chr1.3:69579353-69579372 | None:intergenic | 20.0% |
!!! | CTTACTTTTTGTCTTAAATT+TGG | + | chr1.3:69581947-69581966 | MS.gene49074:intron | 20.0% |
!!! | GGAAAAACAAACTTTTTAAA+AGG | - | chr1.3:69580085-69580104 | None:intergenic | 20.0% |
!!! | GTTTGCTATACTAATATTTA+GGG | - | chr1.3:69579581-69579600 | None:intergenic | 20.0% |
!!! | TAATTTTTTTATGTTGAGGA+GGG | - | chr1.3:69583146-69583165 | None:intergenic | 20.0% |
!!! | TACTTCTTCTTCTTTTTTTA+AGG | - | chr1.3:69579705-69579724 | None:intergenic | 20.0% |
!!! | TAGAATTTTTTGTATTAGGA+AGG | + | chr1.3:69581607-69581626 | MS.gene49074:intron | 20.0% |
!!! | TATACTTTGCTTCTATTTTT+AGG | - | chr1.3:69579678-69579697 | None:intergenic | 20.0% |
!!! | TTGTTTGATTTTTCATATCT+TGG | + | chr1.3:69581477-69581496 | MS.gene49074:intron | 20.0% |
!!! | TTTGACGGTTTTTAAATAAA+AGG | - | chr1.3:69582509-69582528 | None:intergenic | 20.0% |
!!! | TTTGCTATACTAATATTTAG+GGG | - | chr1.3:69579580-69579599 | None:intergenic | 20.0% |
!!! | TTTTGTCAAATATTATAGGA+CGG | - | chr1.3:69580152-69580171 | None:intergenic | 20.0% |
! | AAAATCAAACAAACAACTCT+TGG | - | chr1.3:69581469-69581488 | None:intergenic | 25.0% |
! | AAAATCTATCTAAACCAAAC+CGG | + | chr1.3:69579844-69579863 | MS.gene49074:intron | 25.0% |
! | AAAATGTATTTACTGTCCTA+AGG | + | chr1.3:69577957-69577976 | MS.gene49074:CDS | 25.0% |
! | AAAGAAGTTAAGAATTTGCA+AGG | + | chr1.3:69579772-69579791 | MS.gene49074:intron | 25.0% |
! | AAATCAAACAAACAACTCTT+GGG | - | chr1.3:69581468-69581487 | None:intergenic | 25.0% |
! | AATAAACGTAATAGCAGTAA+TGG | + | chr1.3:69579610-69579629 | MS.gene49074:intron | 25.0% |
! | AATCTCAAAGTTTGATCAAA+TGG | + | chr1.3:69578107-69578126 | MS.gene49074:CDS | 25.0% |
! | ACAAAACCAAAACCAATATT+TGG | + | chr1.3:69579522-69579541 | MS.gene49074:intron | 25.0% |
! | ATACATATGTCAAAGAGTTA+CGG | + | chr1.3:69578904-69578923 | MS.gene49074:CDS | 25.0% |
! | TAAATGTTATTGGTGTACAA+TGG | + | chr1.3:69579143-69579162 | MS.gene49074:intron | 25.0% |
! | TACTTCAAAAAGAATCAAAC+CGG | - | chr1.3:69579254-69579273 | None:intergenic | 25.0% |
! | TATATCACATTGCATTCTAA+TGG | + | chr1.3:69583110-69583129 | MS.gene49074:CDS | 25.0% |
! | TATTATTGGTGTACAATGAT+TGG | + | chr1.3:69579180-69579199 | MS.gene49074:intron | 25.0% |
! | TCAAGGAAATCTTCAATAAT+CGG | - | chr1.3:69582283-69582302 | None:intergenic | 25.0% |
! | TCTTAAGAATTTCAGAAAAC+AGG | + | chr1.3:69582002-69582021 | MS.gene49074:intron | 25.0% |
! | TGGATGATTGTAAATGTTAT+TGG | + | chr1.3:69579133-69579152 | MS.gene49074:intron | 25.0% |
! | TTCAGTGAACTTAAGATTAT+GGG | + | chr1.3:69582949-69582968 | MS.gene49074:CDS | 25.0% |
!! | AAGACATATAGCTATAGTTT+TGG | - | chr1.3:69578371-69578390 | None:intergenic | 25.0% |
!! | ATATTGAGAAAGAAGTTTTG+AGG | + | chr1.3:69578685-69578704 | MS.gene49074:CDS | 25.0% |
!! | GTTTTACCCTTTGTTAAATT+CGG | + | chr1.3:69581865-69581884 | MS.gene49074:intron | 25.0% |
!! | TTAAATTTTTGTCAAGTGTC+AGG | + | chr1.3:69578438-69578457 | MS.gene49074:CDS | 25.0% |
!! | TTTTGTATTAGGAAGGATAA+TGG | + | chr1.3:69581614-69581633 | MS.gene49074:intron | 25.0% |
!!! | AATTTTTTTATGTTGAGGAG+GGG | - | chr1.3:69583145-69583164 | None:intergenic | 25.0% |
!!! | ACATTTATAATTTGGTGCAA+AGG | - | chr1.3:69580757-69580776 | None:intergenic | 25.0% |
!!! | ACCAGTTTTTTTATTCAAAC+CGG | - | chr1.3:69579384-69579403 | None:intergenic | 25.0% |
!!! | ACTTTAACGGTGTTTTTTTT+TGG | + | chr1.3:69581716-69581735 | MS.gene49074:intron | 25.0% |
!!! | CAACATTTTTTTTTTGGCAT+CGG | - | chr1.3:69580724-69580743 | None:intergenic | 25.0% |
!!! | CTACATGTGAATATTTTAGT+TGG | + | chr1.3:69579730-69579749 | MS.gene49074:intron | 25.0% |
!!! | CTTCATTATTTTTTGAACCT+TGG | + | chr1.3:69578201-69578220 | MS.gene49074:CDS | 25.0% |
!!! | CTTCTTCTTCTTTTTTTAAG+GGG | - | chr1.3:69579703-69579722 | None:intergenic | 25.0% |
!!! | GATAGATTTTTTGACAAAAG+CGG | - | chr1.3:69579834-69579853 | None:intergenic | 25.0% |
!!! | GGTTTGCTATACTAATATTT+AGG | - | chr1.3:69579582-69579601 | None:intergenic | 25.0% |
!!! | GTCTTAAATTTGGTTTTTGT+AGG | + | chr1.3:69581957-69581976 | MS.gene49074:intron | 25.0% |
!!! | GTTTTTTTTTGGAGAGTTTA+TGG | + | chr1.3:69581727-69581746 | MS.gene49074:intron | 25.0% |
!!! | TACTTTGCTTCTATTTTTAG+GGG | - | chr1.3:69579676-69579695 | None:intergenic | 25.0% |
!!! | TATGCAGTTATTTGTTATGT+TGG | - | chr1.3:69582482-69582501 | None:intergenic | 25.0% |
!!! | TGGAAAACTAGTTTTAAAAC+CGG | + | chr1.3:69579232-69579251 | MS.gene49074:intron | 25.0% |
AACTGGTTGTACTTAAAAAC+TGG | + | chr1.3:69579476-69579495 | MS.gene49074:intron | 30.0% | |
AAGATCGATCTGAACTTTAA+CGG | + | chr1.3:69581703-69581722 | MS.gene49074:intron | 30.0% | |
AATCAAACAAACAACTCTTG+GGG | - | chr1.3:69581467-69581486 | None:intergenic | 30.0% | |
AATGCATCATCTAATGATGT+TGG | + | chr1.3:69578546-69578565 | MS.gene49074:CDS | 30.0% | |
ATATCTTGGTCTCTTGAATT+TGG | + | chr1.3:69581491-69581510 | MS.gene49074:intron | 30.0% | |
CAAGGAAATCTTCAATAATC+GGG | - | chr1.3:69582282-69582301 | None:intergenic | 30.0% | |
CCAAAACCAAAACCAAATAT+TGG | - | chr1.3:69579537-69579556 | None:intergenic | 30.0% | |
CCACAAAAGGTTCAATATAA+GGG | + | chr1.3:69578777-69578796 | MS.gene49074:CDS | 30.0% | |
CTAGATTGAAGAATTGTGAT+CGG | + | chr1.3:69582538-69582557 | MS.gene49074:intron | 30.0% | |
CTATAGCTATATGTCTTTGA+CGG | + | chr1.3:69578374-69578393 | MS.gene49074:CDS | 30.0% | |
CTTCAGTGAACTTAAGATTA+TGG | + | chr1.3:69582948-69582967 | MS.gene49074:CDS | 30.0% | |
TAACACAGTTTCATAACGAA+CGG | + | chr1.3:69579875-69579894 | MS.gene49074:intron | 30.0% | |
TAAGAAGAATTTCAGCACAA+AGG | - | chr1.3:69581987-69582006 | None:intergenic | 30.0% | |
TCAACCTAGATATTGAAACA+AGG | + | chr1.3:69578805-69578824 | MS.gene49074:CDS | 30.0% | |
TCAGTGAACTTAAGATTATG+GGG | + | chr1.3:69582950-69582969 | MS.gene49074:CDS | 30.0% | |
TCCACAAAAGGTTCAATATA+AGG | + | chr1.3:69578776-69578795 | MS.gene49074:CDS | 30.0% | |
TCTTAAATTGTGGTATTCCA+AGG | - | chr1.3:69578221-69578240 | None:intergenic | 30.0% | |
TGGAACAGAATTAAAAGAAC+AGG | + | chr1.3:69582820-69582839 | MS.gene49074:CDS | 30.0% | |
TGGATGACTGTAACTATTAT+TGG | + | chr1.3:69579166-69579185 | MS.gene49074:intron | 30.0% | |
TTATTAGCACTCCTTCAAAA+TGG | + | chr1.3:69582714-69582733 | MS.gene49074:intron | 30.0% | |
TTCAAATGGATCATCTATTG+CGG | + | chr1.3:69580366-69580385 | MS.gene49074:intron | 30.0% | |
TTCTAGGTTACAAAGATTCA+AGG | + | chr1.3:69578743-69578762 | MS.gene49074:CDS | 30.0% | |
TTTGGAAACTGGATTAAAAC+CGG | + | chr1.3:69579331-69579350 | MS.gene49074:intron | 30.0% | |
! | ACGTTTTCCGAATTTAACAA+AGG | - | chr1.3:69581875-69581894 | None:intergenic | 30.0% |
! | ACTGGTTTAGTTCAAAAAAC+TGG | + | chr1.3:69579398-69579417 | MS.gene49074:intron | 30.0% |
! | ATTTCCTCTAGAAAATATGG+CGG | - | chr1.3:69582910-69582929 | None:intergenic | 30.0% |
! | CATTGTACTATCCATTTTGA+AGG | - | chr1.3:69582728-69582747 | None:intergenic | 30.0% |
! | CGTTTTCCGAATTTAACAAA+GGG | - | chr1.3:69581874-69581893 | None:intergenic | 30.0% |
! | CTCATTTTGTTGACAACAAT+TGG | + | chr1.3:69578397-69578416 | MS.gene49074:CDS | 30.0% |
! | GACGGTTTTTAAATAAAAGG+CGG | - | chr1.3:69582506-69582525 | None:intergenic | 30.0% |
! | GATTCAAGTTATGAGATTGA+TGG | - | chr1.3:69582611-69582630 | None:intergenic | 30.0% |
! | GCAATTTCCTCTAGAAAATA+TGG | - | chr1.3:69582913-69582932 | None:intergenic | 30.0% |
! | TCACTTTATAGTTGTTTCAG+AGG | + | chr1.3:69577921-69577940 | MS.gene49074:CDS | 30.0% |
! | TTATGTTGGTGAGTTCTAAT+TGG | - | chr1.3:69582468-69582487 | None:intergenic | 30.0% |
!! | ACCGGTTTGAATAAAAAAAC+TGG | + | chr1.3:69579380-69579399 | MS.gene49074:intron | 30.0% |
!! | CCAAAACCAATATTTGGTTT+TGG | + | chr1.3:69579528-69579547 | MS.gene49074:intron | 30.0% |
!! | CTATTTGTTGTTAGCTTTCT+TGG | + | chr1.3:69579067-69579086 | MS.gene49074:intron | 30.0% |
!! | TTAGGAAGGATAATGGAATT+TGG | + | chr1.3:69581621-69581640 | MS.gene49074:intron | 30.0% |
!!! | AAAACTGGTTTTTAGTGAAG+TGG | + | chr1.3:69579491-69579510 | MS.gene49074:intron | 30.0% |
!!! | AACTGGTTTTTTTGACAAAC+CGG | + | chr1.3:69579415-69579434 | MS.gene49074:intron | 30.0% |
!!! | ATTTGGTTTTGGTTTTGGTT+TGG | + | chr1.3:69579539-69579558 | MS.gene49074:intron | 30.0% |
!!! | ATTTTTTTATGTTGAGGAGG+GGG | - | chr1.3:69583144-69583163 | None:intergenic | 30.0% |
!!! | CCAAAACCAAATATTGGTTT+TGG | - | chr1.3:69579531-69579550 | None:intergenic | 30.0% |
!!! | CCAATATTTGGTTTTGGTTT+TGG | + | chr1.3:69579534-69579553 | MS.gene49074:intron | 30.0% |
!!! | GTTTTTAAGTACAACCAGTT+TGG | - | chr1.3:69579476-69579495 | None:intergenic | 30.0% |
!!! | TCTGGAATTTGTTTTGCAAT+AGG | - | chr1.3:69578992-69579011 | None:intergenic | 30.0% |
AAAGAGTTACGGAAAGGAAA+AGG | + | chr1.3:69578915-69578934 | MS.gene49074:CDS | 35.0% | |
AACGTACAAGAACTGATGAA+GGG | + | chr1.3:69583253-69583272 | MS.gene49074:CDS | 35.0% | |
AAGGAAAAGAGCTACTTGTT+TGG | + | chr1.3:69578956-69578975 | MS.gene49074:intron | 35.0% | |
AAGTAAACCATCAGGCATAA+GGG | - | chr1.3:69578592-69578611 | None:intergenic | 35.0% | |
AAGTACAACCAGTTTGGATA+TGG | - | chr1.3:69579470-69579489 | None:intergenic | 35.0% | |
AAGTTAAGAATTTGCAAGGC+TGG | + | chr1.3:69579776-69579795 | MS.gene49074:intron | 35.0% | |
AATCGTGAAAGAAGGTCTAA+AGG | + | chr1.3:69578662-69578681 | MS.gene49074:CDS | 35.0% | |
ACCAAGACTCTTAACATCAT+TGG | - | chr1.3:69579026-69579045 | None:intergenic | 35.0% | |
ACCTAGATATTGAAACAAGG+TGG | + | chr1.3:69578808-69578827 | MS.gene49074:CDS | 35.0% | |
AGGAACAAGAAACAGAAATC+AGG | + | chr1.3:69578045-69578064 | MS.gene49074:CDS | 35.0% | |
AGGAGGCTTGGAATTATTTA+AGG | - | chr1.3:69579930-69579949 | None:intergenic | 35.0% | |
AGTGTAAAACAACTTTCCAC+TGG | - | chr1.3:69582440-69582459 | None:intergenic | 35.0% | |
ATCTAGCGAATCATGTTTGA+CGG | - | chr1.3:69582524-69582543 | None:intergenic | 35.0% | |
ATGCCTGATGGTTTACTTAT+GGG | + | chr1.3:69578594-69578613 | MS.gene49074:CDS | 35.0% | |
ATGTTATTGGTGTACAATGG+TGG | + | chr1.3:69579146-69579165 | MS.gene49074:intron | 35.0% | |
ATTTCAGAAAACAGGCGTAA+TGG | + | chr1.3:69582010-69582029 | MS.gene49074:intron | 35.0% | |
CATGTCAACATTTGCATTGT+TGG | + | chr1.3:69578869-69578888 | MS.gene49074:CDS | 35.0% | |
CCTAAGGAGATAAAGTTTAG+CGG | + | chr1.3:69577973-69577992 | MS.gene49074:CDS | 35.0% | |
CGAGTTCAATGAGAAATCAT+TGG | + | chr1.3:69578001-69578020 | MS.gene49074:CDS | 35.0% | |
CGTTCATCAACGTAAACAAA+AGG | - | chr1.3:69582242-69582261 | None:intergenic | 35.0% | |
CTATGAAACATCGTACGAAA+AGG | - | chr1.3:69582640-69582659 | None:intergenic | 35.0% | |
GAATCTTTGTAACCTAGAAG+AGG | - | chr1.3:69578742-69578761 | None:intergenic | 35.0% | |
GAATGAAACACAAAATGCAG+AGG | - | chr1.3:69581126-69581145 | None:intergenic | 35.0% | |
GATGTTAAGAGTCTTGGTTT+AGG | + | chr1.3:69579028-69579047 | MS.gene49074:intron | 35.0% | |
GTCAAATATTATAGGACGGA+GGG | - | chr1.3:69580148-69580167 | None:intergenic | 35.0% | |
GTCGTGACTTACAAAACTTA+TGG | + | chr1.3:69579212-69579231 | MS.gene49074:intron | 35.0% | |
TAAAAGAACAGGAATGTGCA+AGG | + | chr1.3:69582831-69582850 | MS.gene49074:CDS | 35.0% | |
TAAGTAAACCATCAGGCATA+AGG | - | chr1.3:69578593-69578612 | None:intergenic | 35.0% | |
TATGCCTGATGGTTTACTTA+TGG | + | chr1.3:69578593-69578612 | MS.gene49074:CDS | 35.0% | |
TATGTCAAAGAGTTACGGAA+AGG | + | chr1.3:69578909-69578928 | MS.gene49074:CDS | 35.0% | |
TCAAATGGATCATCTATTGC+GGG | + | chr1.3:69580367-69580386 | MS.gene49074:intron | 35.0% | |
TCATGATCCACCTTTCTAAA+GGG | - | chr1.3:69578177-69578196 | None:intergenic | 35.0% | |
TCATTGATGGAAGTCAAATG+AGG | - | chr1.3:69580013-69580032 | None:intergenic | 35.0% | |
TCATTGGCAGTGTAAAATTC+TGG | - | chr1.3:69579010-69579029 | None:intergenic | 35.0% | |
TCTTGAATTTGGTTGATCAG+AGG | + | chr1.3:69581502-69581521 | MS.gene49074:intron | 35.0% | |
TGAAACACAAAGAGGAAGAT+AGG | + | chr1.3:69578025-69578044 | MS.gene49074:CDS | 35.0% | |
TGTCAAATATTATAGGACGG+AGG | - | chr1.3:69580149-69580168 | None:intergenic | 35.0% | |
TTAAGAGTCTTGGTTTAGGA+TGG | + | chr1.3:69579032-69579051 | MS.gene49074:intron | 35.0% | |
TTCATGATCCACCTTTCTAA+AGG | - | chr1.3:69578178-69578197 | None:intergenic | 35.0% | |
TTGGGGACTAAAGAAATCAT+GGG | - | chr1.3:69581450-69581469 | None:intergenic | 35.0% | |
! | AAGAATTGTGATCGGTTCAT+CGG | + | chr1.3:69582546-69582565 | MS.gene49074:intron | 35.0% |
! | ACAAGTATGAGGAAGGATTT+TGG | + | chr1.3:69583289-69583308 | MS.gene49074:CDS | 35.0% |
! | ACGTAAACAAAAGGCTCTAA+TGG | - | chr1.3:69582233-69582252 | None:intergenic | 35.0% |
! | AGGGGTGAGATTAGTTATTA+AGG | - | chr1.3:69582758-69582777 | None:intergenic | 35.0% |
! | ATGCTTCTACTCCAGTTTTT+AGG | + | chr1.3:69581912-69581931 | MS.gene49074:intron | 35.0% |
! | CCCTTATATTGAACCTTTTG+TGG | - | chr1.3:69578780-69578799 | None:intergenic | 35.0% |
! | CTAAATGTTCTAAGCTGTCT+AGG | - | chr1.3:69583080-69583099 | None:intergenic | 35.0% |
! | CTTTATAGTTGTTTCAGAGG+AGG | + | chr1.3:69577924-69577943 | MS.gene49074:CDS | 35.0% |
! | CTTTTCGTACGATGTTTCAT+AGG | + | chr1.3:69582638-69582657 | MS.gene49074:intron | 35.0% |
! | GACAAAAGCGGTTTTTATGT+TGG | - | chr1.3:69579822-69579841 | None:intergenic | 35.0% |
! | GACATATTCGAGTTAACTTC+TGG | + | chr1.3:69582107-69582126 | MS.gene49074:CDS | 35.0% |
! | TCCACCTTGTTTCAATATCT+AGG | - | chr1.3:69578812-69578831 | None:intergenic | 35.0% |
! | TTTCCTCTAGAAAATATGGC+GGG | - | chr1.3:69582909-69582928 | None:intergenic | 35.0% |
!! | AGGATTTTGGAAAGAAGATG+AGG | + | chr1.3:69583302-69583321 | MS.gene49074:CDS | 35.0% |
!! | ATGTTGGCTGCTCATTTTAA+GGG | - | chr1.3:69579806-69579825 | None:intergenic | 35.0% |
!! | CTTTTAATTCTGTTCCAAGC+CGG | - | chr1.3:69582817-69582836 | None:intergenic | 35.0% |
!! | TATGTTGGCTGCTCATTTTA+AGG | - | chr1.3:69579807-69579826 | None:intergenic | 35.0% |
!!! | AAAGAAGTTTTGAGGATTCG+TGG | + | chr1.3:69578693-69578712 | MS.gene49074:CDS | 35.0% |
!!! | GGAATTTGTTTTGCAATAGG+TGG | - | chr1.3:69578989-69579008 | None:intergenic | 35.0% |
!!! | GTTTTTAGTGAAGTGGTTTC+AGG | + | chr1.3:69579498-69579517 | MS.gene49074:intron | 35.0% |
!!! | TGCAGAGGTTTTGATTTGTT+CGG | - | chr1.3:69581111-69581130 | None:intergenic | 35.0% |
!!! | TTTTTTTATGTTGAGGAGGG+GGG | - | chr1.3:69583143-69583162 | None:intergenic | 35.0% |
AAAAAAGCCCTTATGCCTGA+TGG | + | chr1.3:69578582-69578601 | MS.gene49074:CDS | 40.0% | |
AACAACTCTGTTCCTGAACA+AGG | + | chr1.3:69581161-69581180 | MS.gene49074:intron | 40.0% | |
AAGGAGATAAAGTTTAGCGG+TGG | + | chr1.3:69577976-69577995 | MS.gene49074:CDS | 40.0% | |
AAGTCCAAAAGTCAGTGGTT+AGG | - | chr1.3:69578344-69578363 | None:intergenic | 40.0% | |
AATTGAGAGTCTTGAGCCTT+CGG | + | chr1.3:69583019-69583038 | MS.gene49074:CDS | 40.0% | |
ACAAAGATGCGCATAACAAG+GGG | - | chr1.3:69579970-69579989 | None:intergenic | 40.0% | |
ACATTCCTTTCCCAACATTG+TGG | + | chr1.3:69578309-69578328 | MS.gene49074:CDS | 40.0% | |
ACGTGACATCTTGCAAATGT+GGG | + | chr1.3:69578263-69578282 | MS.gene49074:CDS | 40.0% | |
ACTCATTCTGCTCAGATTCA+AGG | - | chr1.3:69582300-69582319 | None:intergenic | 40.0% | |
AGACAAAGATGCGCATAACA+AGG | - | chr1.3:69579972-69579991 | None:intergenic | 40.0% | |
AGTTAGGTGGTACAAGTATG+AGG | + | chr1.3:69583278-69583297 | MS.gene49074:CDS | 40.0% | |
AGTTGACATACACTGCTGAA+AGG | + | chr1.3:69582366-69582385 | MS.gene49074:CDS | 40.0% | |
ATGTTCAAGCTTCCTCTTCT+AGG | + | chr1.3:69578727-69578746 | MS.gene49074:CDS | 40.0% | |
CAACGTACAAGAACTGATGA+AGG | + | chr1.3:69583252-69583271 | MS.gene49074:CDS | 40.0% | |
CCGCTAAACTTTATCTCCTT+AGG | - | chr1.3:69577976-69577995 | None:intergenic | 40.0% | |
CGTGAGGGAATCTTAAATTG+TGG | - | chr1.3:69578231-69578250 | None:intergenic | 40.0% | |
CTATCTAAACCAAACCGGTA+AGG | + | chr1.3:69579849-69579868 | MS.gene49074:intron | 40.0% | |
CTTCATCAGTTCTTGTACGT+TGG | - | chr1.3:69583254-69583273 | None:intergenic | 40.0% | |
CTTGGGGACTAAAGAAATCA+TGG | - | chr1.3:69581451-69581470 | None:intergenic | 40.0% | |
GAACTGATGAAGGGATAGTT+AGG | + | chr1.3:69583262-69583281 | MS.gene49074:CDS | 40.0% | |
GAAGCAAAGAAGATGTCACA+TGG | - | chr1.3:69582976-69582995 | None:intergenic | 40.0% | |
GACAAAGATGCGCATAACAA+GGG | - | chr1.3:69579971-69579990 | None:intergenic | 40.0% | |
GCAAACTCTACCACAATGTT+GGG | - | chr1.3:69578322-69578341 | None:intergenic | 40.0% | |
GCCAATGATGTTAAGAGTCT+TGG | + | chr1.3:69579022-69579041 | MS.gene49074:intron | 40.0% | |
GGACTAAAGAAATCATGGGT+TGG | - | chr1.3:69581446-69581465 | None:intergenic | 40.0% | |
GGATCTGGACACAGATATAT+TGG | + | chr1.3:69582064-69582083 | MS.gene49074:CDS | 40.0% | |
GTGGAATTGTTTGACTGCTT+GGG | + | chr1.3:69578491-69578510 | MS.gene49074:CDS | 40.0% | |
GTTTGGATATGGTTCAGAAC+CGG | - | chr1.3:69579459-69579478 | None:intergenic | 40.0% | |
TGAAACATCGTACGAAAAGG+TGG | - | chr1.3:69582637-69582656 | None:intergenic | 40.0% | |
TGATTCTACTATTCGCCAGA+AGG | + | chr1.3:69583176-69583195 | MS.gene49074:CDS | 40.0% | |
TGGAATTGTTTGACTGCTTG+GGG | + | chr1.3:69578492-69578511 | MS.gene49074:CDS | 40.0% | |
TGTGGAATTGTTTGACTGCT+TGG | + | chr1.3:69578490-69578509 | MS.gene49074:CDS | 40.0% | |
TTCATGCTCAACAGCAGATA+TGG | + | chr1.3:69578068-69578087 | MS.gene49074:CDS | 40.0% | |
TTGTTCAGGAACAGAGTTGT+TGG | - | chr1.3:69581162-69581181 | None:intergenic | 40.0% | |
TTTGGTTGATCAGAGGAAGT+TGG | + | chr1.3:69581509-69581528 | MS.gene49074:intron | 40.0% | |
! | AAACCCGCCATATTTTCTAG+AGG | + | chr1.3:69582903-69582922 | MS.gene49074:CDS | 40.0% |
! | AATGGAACTTCGAAGAGCAT+TGG | + | chr1.3:69578125-69578144 | MS.gene49074:CDS | 40.0% |
! | AGGCTCAAGACTCTCAATTT+TGG | - | chr1.3:69583018-69583037 | None:intergenic | 40.0% |
! | CACTCACGTACAAGTTGAAA+TGG | - | chr1.3:69582340-69582359 | None:intergenic | 40.0% |
! | GCATTGGGTAAAGTGTTCAT+AGG | + | chr1.3:69578141-69578160 | MS.gene49074:CDS | 40.0% |
! | GTTCTGAACCATATCCAAAC+TGG | + | chr1.3:69579459-69579478 | MS.gene49074:intron | 40.0% |
! | TATATAGCGTTGAACACCGA+AGG | - | chr1.3:69583038-69583057 | None:intergenic | 40.0% |
! | TCATTGGCTGAAACACAAAG+AGG | + | chr1.3:69578017-69578036 | MS.gene49074:CDS | 40.0% |
! | TCGGTGTTCAACGCTATATA+GGG | + | chr1.3:69583038-69583057 | MS.gene49074:CDS | 40.0% |
! | TCTTCTCGTGTTGTTCTCTA+AGG | + | chr1.3:69581211-69581230 | MS.gene49074:intron | 40.0% |
! | TCTTGAGCTTCCCTTTAGAA+AGG | + | chr1.3:69578164-69578183 | MS.gene49074:CDS | 40.0% |
! | TTGACAAACCGGTTTCAAAC+CGG | + | chr1.3:69579426-69579445 | MS.gene49074:intron | 40.0% |
!! | AGGAGTGCTAATAACTAGCA+AGG | - | chr1.3:69582708-69582727 | None:intergenic | 40.0% |
!! | ATGGAACTTCGAAGAGCATT+GGG | + | chr1.3:69578126-69578145 | MS.gene49074:CDS | 40.0% |
!! | TTCGGTGTTCAACGCTATAT+AGG | + | chr1.3:69583037-69583056 | MS.gene49074:CDS | 40.0% |
!!! | TTTGCCTAACCACTGACTTT+TGG | + | chr1.3:69578337-69578356 | MS.gene49074:CDS | 40.0% |
AAACTGTGTTACCGCCTTAC+CGG | - | chr1.3:69579866-69579885 | None:intergenic | 45.0% | |
AGAACAACACGAGAAGAGTG+CGG | - | chr1.3:69581208-69581227 | None:intergenic | 45.0% | |
AGGAGATGTAATGGCTCAGA+CGG | + | chr1.3:69578467-69578486 | MS.gene49074:CDS | 45.0% | |
AGGTGGTACAAGTATGAGGA+AGG | + | chr1.3:69583282-69583301 | MS.gene49074:CDS | 45.0% | |
ATGGATCATCTATTGCGGGA+CGG | + | chr1.3:69580371-69580390 | MS.gene49074:intron | 45.0% | |
CACGTGACATCTTGCAAATG+TGG | + | chr1.3:69578262-69578281 | MS.gene49074:CDS | 45.0% | |
CCTCCCATAAGTAAACCATC+AGG | - | chr1.3:69578600-69578619 | None:intergenic | 45.0% | |
CCTGATGGTTTACTTATGGG+AGG | + | chr1.3:69578597-69578616 | MS.gene49074:CDS | 45.0% | |
CGAACGGATCCTAAACGAAA+CGG | + | chr1.3:69579891-69579910 | MS.gene49074:intron | 45.0% | |
CGTGACATCTTGCAAATGTG+GGG | + | chr1.3:69578264-69578283 | MS.gene49074:CDS | 45.0% | |
CTCATGCTCTGATGTTTCAG+AGG | - | chr1.3:69577824-69577843 | None:intergenic | 45.0% | |
CTCTACCACAATGTTGGGAA+AGG | - | chr1.3:69578317-69578336 | None:intergenic | 45.0% | |
CTGATGAAGGGATAGTTAGG+TGG | + | chr1.3:69583265-69583284 | MS.gene49074:CDS | 45.0% | |
GACTGCTTGGGGGTTAAATA+AGG | + | chr1.3:69578503-69578522 | MS.gene49074:CDS | 45.0% | |
GATATGGTTCAGAACCGGTT+CGG | - | chr1.3:69579454-69579473 | None:intergenic | 45.0% | |
GCAAGAAGTCCAAAAGTCAG+TGG | - | chr1.3:69578349-69578368 | None:intergenic | 45.0% | |
GCGCGAATTTATCACATGCA+TGG | + | chr1.3:69583209-69583228 | MS.gene49074:CDS | 45.0% | |
GCTCAACAGCAGATATGGAA+GGG | + | chr1.3:69578073-69578092 | MS.gene49074:CDS | 45.0% | |
GGAATTGTTTGACTGCTTGG+GGG | + | chr1.3:69578493-69578512 | MS.gene49074:CDS | 45.0% | |
GGCAAACTCTACCACAATGT+TGG | - | chr1.3:69578323-69578342 | None:intergenic | 45.0% | |
TCAAGCGTCTTCCAAAGAAG+TGG | - | chr1.3:69582176-69582195 | None:intergenic | 45.0% | |
TCTAAACCAAACCGGTAAGG+CGG | + | chr1.3:69579852-69579871 | MS.gene49074:intron | 45.0% | |
TGCTCAACAGCAGATATGGA+AGG | + | chr1.3:69578072-69578091 | MS.gene49074:CDS | 45.0% | |
TGCTCTGATGTTTCAGAGGT+TGG | - | chr1.3:69577820-69577839 | None:intergenic | 45.0% | |
TGGAAGTCAAATGAGGTGTG+TGG | - | chr1.3:69580006-69580025 | None:intergenic | 45.0% | |
TGTGGGGCAACGAAAAAGTA+AGG | + | chr1.3:69578280-69578299 | MS.gene49074:CDS | 45.0% | |
TGTTTCGAACACGAGGAGAT+GGG | + | chr1.3:69582040-69582059 | MS.gene49074:CDS | 45.0% | |
TTGCTCATGTTTGTAGCGCA+TGG | + | chr1.3:69582132-69582151 | MS.gene49074:CDS | 45.0% | |
TTGTTTCGAACACGAGGAGA+TGG | + | chr1.3:69582039-69582058 | MS.gene49074:CDS | 45.0% | |
! | AAGACGTTGTTTCGAACACG+AGG | + | chr1.3:69582033-69582052 | MS.gene49074:CDS | 45.0% |
! | ACGTGATAATGTAGTGCGTG+AGG | - | chr1.3:69578247-69578266 | None:intergenic | 45.0% |
! | AGTAGCTCTTTTCCTTTCCC+CGG | - | chr1.3:69578952-69578971 | None:intergenic | 45.0% |
! | CAAGAATCGCTCAGAAGCAT+GGG | + | chr1.3:69577897-69577916 | MS.gene49074:CDS | 45.0% |
! | CGATTCTTGCGTTTCTGAGA+GGG | - | chr1.3:69577886-69577905 | None:intergenic | 45.0% |
! | CGTGATAATGTAGTGCGTGA+GGG | - | chr1.3:69578246-69578265 | None:intergenic | 45.0% |
! | CGTTTCGGATTTTCGAAAGG+AGG | - | chr1.3:69579947-69579966 | None:intergenic | 45.0% |
! | CTTGCTGTGATCCACTTCTT+TGG | + | chr1.3:69582162-69582181 | MS.gene49074:CDS | 45.0% |
! | GGCATGCATTGATCCACAAA+AGG | + | chr1.3:69578764-69578783 | MS.gene49074:CDS | 45.0% |
! | TAATGGATATGCACTGCCAG+TGG | + | chr1.3:69582421-69582440 | MS.gene49074:intron | 45.0% |
! | TGAGCTTCCCTTTAGAAAGG+TGG | + | chr1.3:69578167-69578186 | MS.gene49074:CDS | 45.0% |
!! | CTCTGAAACATCAGAGCATG+AGG | + | chr1.3:69577822-69577841 | MS.gene49074:CDS | 45.0% |
!! | TATGGCGGGTTTGCTATACT+AGG | - | chr1.3:69582895-69582914 | None:intergenic | 45.0% |
!! | AATAAAAAATAATTTAGTAA+TGG | + | chr1.3:69580548-69580567 | MS.gene49074:intron | 5.0% |
!!! | TTATTGTTTTTTTTTTTTTT+TGG | + | chr1.3:69581551-69581570 | MS.gene49074:intron | 5.0% |
AAAGCGACGCCGTTTCGTTT+AGG | - | chr1.3:69579903-69579922 | None:intergenic | 50.0% | |
AATCCGTTGCTGGAAAGAGC+TGG | + | chr1.3:69582855-69582874 | MS.gene49074:CDS | 50.0% | |
ACTCCAGCTCTTTCCAGCAA+CGG | - | chr1.3:69582861-69582880 | None:intergenic | 50.0% | |
AGAACCAGTCGTTTGAGCTG+TGG | - | chr1.3:69582793-69582812 | None:intergenic | 50.0% | |
AGGCCACTCAGGAGATGTAA+TGG | + | chr1.3:69578458-69578477 | MS.gene49074:CDS | 50.0% | |
ATGTAATGGCTCAGACGGTG+TGG | + | chr1.3:69578472-69578491 | MS.gene49074:CDS | 50.0% | |
CTAATCTCACCCCTTGTTGC+AGG | + | chr1.3:69582764-69582783 | MS.gene49074:intron | 50.0% | |
GAACCAGTCGTTTGAGCTGT+GGG | - | chr1.3:69582792-69582811 | None:intergenic | 50.0% | |
GAGCCATTACATCTCCTGAG+TGG | - | chr1.3:69578464-69578483 | None:intergenic | 50.0% | |
GCAAGAATCGCTCAGAAGCA+TGG | + | chr1.3:69577896-69577915 | MS.gene49074:CDS | 50.0% | |
GCGATTCTTGCGTTTCTGAG+AGG | - | chr1.3:69577887-69577906 | None:intergenic | 50.0% | |
GGTTGATCAGAGGAAGTTGG+TGG | + | chr1.3:69581512-69581531 | MS.gene49074:intron | 50.0% | |
TGATGGGGTTGTCCTTGTTC+AGG | - | chr1.3:69581176-69581195 | None:intergenic | 50.0% | |
! | AACAACACGAGAAGAGTGCG+GGG | - | chr1.3:69581206-69581225 | None:intergenic | 50.0% |
! | CGGATTTTCGAAAGGAGGCT+TGG | - | chr1.3:69579942-69579961 | None:intergenic | 50.0% |
! | GAACAACACGAGAAGAGTGC+GGG | - | chr1.3:69581207-69581226 | None:intergenic | 50.0% |
! | GCTCAAACGACTGGTTCTTC+CGG | + | chr1.3:69582795-69582814 | MS.gene49074:CDS | 50.0% |
! | GGGCGTTTCGGATTTTCGAA+AGG | - | chr1.3:69579950-69579969 | None:intergenic | 50.0% |
! | GTAGCTCTTTTCCTTTCCCC+GGG | - | chr1.3:69578951-69578970 | None:intergenic | 50.0% |
! | GTTTCAAACCGGTTCCGAAC+CGG | + | chr1.3:69579437-69579456 | MS.gene49074:intron | 50.0% |
! | TTCTGAGAGGGAGGAGGTAA+TGG | - | chr1.3:69577874-69577893 | None:intergenic | 50.0% |
! | TTCTTGCGTTTCTGAGAGGG+AGG | - | chr1.3:69577883-69577902 | None:intergenic | 50.0% |
! | TTTTCCTTTCCCCGGGCAAA+GGG | - | chr1.3:69578944-69578963 | None:intergenic | 50.0% |
!! | AGAGGGAGGAGGTAATGGAT+TGG | - | chr1.3:69577869-69577888 | None:intergenic | 50.0% |
!! | AGGTAATGGATTGGCAGCAG+GGG | - | chr1.3:69577860-69577879 | None:intergenic | 50.0% |
!! | GAGGTAATGGATTGGCAGCA+GGG | - | chr1.3:69577861-69577880 | None:intergenic | 50.0% |
!! | GTTCGGAACCGGTTTGAAAC+CGG | - | chr1.3:69579437-69579456 | None:intergenic | 50.0% |
AAAAGGTCTCCCTTTGCCCG+GGG | + | chr1.3:69578932-69578951 | MS.gene49074:intron | 55.0% | |
GAAAAGGTCTCCCTTTGCCC+GGG | + | chr1.3:69578931-69578950 | MS.gene49074:intron | 55.0% | |
GGAAAAGGTCTCCCTTTGCC+CGG | + | chr1.3:69578930-69578949 | MS.gene49074:intron | 55.0% | |
TGAGGATTCGTGGTGCAGTG+AGG | + | chr1.3:69578703-69578722 | MS.gene49074:CDS | 55.0% | |
TGTCAAGTGTCAGGCCACTC+AGG | + | chr1.3:69578447-69578466 | MS.gene49074:CDS | 55.0% | |
TGTGCAAGGCAATCCGTTGC+TGG | + | chr1.3:69582845-69582864 | MS.gene49074:CDS | 55.0% | |
TGTTTGTAGCGCATGGCGCA+TGG | + | chr1.3:69582139-69582158 | MS.gene49074:CDS | 55.0% | |
TTCGAACACGAGGAGATGGG+AGG | + | chr1.3:69582043-69582062 | MS.gene49074:CDS | 55.0% | |
! | AACGACTGGTTCTTCCGGCT+TGG | + | chr1.3:69582800-69582819 | MS.gene49074:CDS | 55.0% |
! | CTTTTCCTTTCCCCGGGCAA+AGG | - | chr1.3:69578945-69578964 | None:intergenic | 55.0% |
! | GTGTTACCGCCTTACCGGTT+TGG | - | chr1.3:69579861-69579880 | None:intergenic | 55.0% |
! | TTGCGTTTCTGAGAGGGAGG+AGG | - | chr1.3:69577880-69577899 | None:intergenic | 55.0% |
!! | AATGGATTGGCAGCAGGGGT+AGG | - | chr1.3:69577856-69577875 | None:intergenic | 55.0% |
!! | GCGCATAACAAGGGGCGTTT+CGG | - | chr1.3:69579962-69579981 | None:intergenic | 55.0% |
!! | GGAGGTAATGGATTGGCAGC+AGG | - | chr1.3:69577862-69577881 | None:intergenic | 55.0% |
!! | GTTCAGAACCGGTTCGGAAC+CGG | - | chr1.3:69579448-69579467 | None:intergenic | 55.0% |
AGCTGTGGGCACCTGCAACA+AGG | - | chr1.3:69582778-69582797 | None:intergenic | 60.0% | |
AGTGCGGGGTGGAGGATGAT+GGG | - | chr1.3:69581192-69581211 | None:intergenic | 60.0% | |
CACGAGGAGATGGGAGGATC+TGG | + | chr1.3:69582049-69582068 | MS.gene49074:CDS | 60.0% | |
CGCGCAATCGAGAAGCCTTC+TGG | - | chr1.3:69583194-69583213 | None:intergenic | 60.0% | |
CTGTGGGCACCTGCAACAAG+GGG | - | chr1.3:69582776-69582795 | None:intergenic | 60.0% | |
GCTGTGGGCACCTGCAACAA+GGG | - | chr1.3:69582777-69582796 | None:intergenic | 60.0% | |
GTGCCCACAGCTCAAACGAC+TGG | + | chr1.3:69582786-69582805 | MS.gene49074:CDS | 60.0% | |
! | AACACGAGAAGAGTGCGGGG+TGG | - | chr1.3:69581203-69581222 | None:intergenic | 60.0% |
GAGTGCGGGGTGGAGGATGA+TGG | - | chr1.3:69581193-69581212 | None:intergenic | 65.0% | |
GTCTCCCTTTGCCCGGGGAA+AGG | + | chr1.3:69578937-69578956 | MS.gene49074:intron | 65.0% | |
GTGCGGGGTGGAGGATGATG+GGG | - | chr1.3:69581191-69581210 | None:intergenic | 65.0% | |
! | ACGAGAAGAGTGCGGGGTGG+AGG | - | chr1.3:69581200-69581219 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 69577799 | 69583344 | 69577799 | ID=MS.gene49074 |
chr1.3 | mRNA | 69577799 | 69583344 | 69577799 | ID=MS.gene49074.t1;Parent=MS.gene49074 |
chr1.3 | exon | 69577799 | 69578936 | 69577799 | ID=MS.gene49074.t1.exon1;Parent=MS.gene49074.t1 |
chr1.3 | CDS | 69577799 | 69578936 | 69577799 | ID=cds.MS.gene49074.t1;Parent=MS.gene49074.t1 |
chr1.3 | exon | 69582024 | 69582387 | 69582024 | ID=MS.gene49074.t1.exon2;Parent=MS.gene49074.t1 |
chr1.3 | CDS | 69582024 | 69582387 | 69582024 | ID=cds.MS.gene49074.t1;Parent=MS.gene49074.t1 |
chr1.3 | exon | 69582786 | 69583344 | 69582786 | ID=MS.gene49074.t1.exon3;Parent=MS.gene49074.t1 |
chr1.3 | CDS | 69582786 | 69583344 | 69582786 | ID=cds.MS.gene49074.t1;Parent=MS.gene49074.t1 |
Gene Sequence |
Protein sequence |