AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49199

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49199.t1 MTR_5g072830 89.333 450 48 0 1 450 1 450 0.0 845
MS.gene49199.t1 MTR_5g072840 87.333 450 57 0 1 450 1 450 0.0 832
MS.gene49199.t1 MTR_5g072820 84.889 450 68 0 1 450 1 450 0.0 810
MS.gene49199.t1 MTR_5g072810 80.482 456 82 3 1 450 1 455 0.0 758
MS.gene49199.t1 MTR_5g072860 50.331 453 206 9 10 448 18 465 5.23e-150 435
MS.gene49199.t1 MTR_3g031400 48.322 447 214 7 7 448 15 449 4.81e-144 420
MS.gene49199.t1 MTR_5g075440 49.231 455 212 9 7 448 7 455 3.28e-143 417
MS.gene49199.t1 MTR_3g031450 46.889 450 216 10 8 448 16 451 1.98e-139 408
MS.gene49199.t1 MTR_5g072850 43.439 442 177 12 10 448 10 381 2.62e-105 318
MS.gene49199.t1 MTR_5g035580 29.724 471 273 14 10 450 13 455 8.81e-63 210
MS.gene49199.t1 MTR_6g013990 31.959 485 267 14 10 448 10 477 2.45e-62 209
MS.gene49199.t1 MTR_2g008210 29.424 486 290 15 3 448 4 476 1.80e-60 205
MS.gene49199.t1 MTR_5g464810 30.705 482 275 15 10 448 12 477 3.19e-60 204
MS.gene49199.t1 MTR_5g064240 30.705 482 275 15 10 448 12 477 3.19e-60 204
MS.gene49199.t1 MTR_8g059425 29.461 482 283 13 10 448 10 477 6.70e-59 201
MS.gene49199.t1 MTR_0036s0220 31.198 484 274 16 8 448 10 477 8.48e-59 200
MS.gene49199.t1 MTR_5g464760 30.290 482 279 13 10 448 12 479 3.15e-58 199
MS.gene49199.t1 MTR_6g038300 30.065 459 289 11 10 449 11 456 3.64e-58 198
MS.gene49199.t1 MTR_7g080950 29.978 457 287 12 10 448 6 447 4.36e-58 198
MS.gene49199.t1 MTR_6g038220 30.369 461 283 14 10 449 11 454 7.80e-58 197
MS.gene49199.t1 MTR_6g038200 29.310 464 289 12 8 449 9 455 1.16e-57 197
MS.gene49199.t1 MTR_6g038240 30.603 464 277 14 10 448 11 454 2.08e-57 196
MS.gene49199.t1 MTR_6g038230 28.664 464 292 11 8 449 9 455 2.30e-57 196
MS.gene49199.t1 MTR_6g013920 30.021 483 280 13 10 448 10 478 3.68e-57 196
MS.gene49199.t1 MTR_6g014187 29.158 487 280 15 10 448 10 479 7.88e-57 195
MS.gene49199.t1 MTR_5g035560 29.424 469 273 16 10 448 11 451 1.84e-56 194
MS.gene49199.t1 MTR_6g014220 29.461 482 283 13 10 448 10 477 2.81e-56 194
MS.gene49199.t1 MTR_6g011340 31.006 487 271 15 10 448 10 479 1.71e-55 192
MS.gene49199.t1 MTR_7g080935 30.396 454 289 10 10 448 11 452 2.02e-55 191
MS.gene49199.t1 MTR_6g013960 28.834 489 279 14 10 448 10 479 3.97e-55 191
MS.gene49199.t1 MTR_3g084520 29.375 480 287 16 10 449 6 473 5.03e-55 190
MS.gene49199.t1 MTR_6g014270 28.163 490 291 13 6 448 3 478 1.57e-54 189
MS.gene49199.t1 MTR_6g014290 28.778 483 285 14 10 448 10 477 7.15e-54 187
MS.gene49199.t1 MTR_6g013900 29.193 483 284 13 10 448 10 478 7.85e-54 187
MS.gene49199.t1 MTR_3g084540 29.072 485 283 17 10 449 6 474 8.10e-54 187
MS.gene49199.t1 MTR_6g014310 29.545 484 282 15 10 448 11 480 1.21e-53 187
MS.gene49199.t1 MTR_3g008010 28.216 482 289 14 10 448 10 477 2.76e-53 186
MS.gene49199.t1 MTR_6g014040 28.866 485 285 14 10 448 10 480 1.14e-52 184
MS.gene49199.t1 MTR_3g079480 29.485 485 279 15 10 448 21 488 2.51e-52 183
MS.gene49199.t1 MTR_6g014250 28.008 482 290 13 10 448 10 477 5.30e-52 182
MS.gene49199.t1 MTR_4g094220 29.569 487 274 13 10 445 7 475 1.28e-51 181
MS.gene49199.t1 MTR_4g095008 29.501 461 278 16 19 448 20 464 1.41e-51 182
MS.gene49199.t1 MTR_6g014020 28.512 484 287 16 10 448 10 479 3.41e-51 180
MS.gene49199.t1 MTR_7g080900 27.753 454 303 11 10 448 12 455 5.29e-51 179
MS.gene49199.t1 MTR_6g013440 27.902 491 281 16 10 448 11 480 1.69e-50 178
MS.gene49199.t1 MTR_3g084530 29.019 479 288 15 10 448 6 472 2.41e-50 177
MS.gene49199.t1 MTR_7g080940 29.231 455 293 11 10 448 11 452 2.75e-50 177
MS.gene49199.t1 MTR_6g013450 27.423 485 292 12 10 448 10 480 3.05e-50 177
MS.gene49199.t1 MTR_8g083280 28.817 465 293 13 11 448 8 461 1.07e-49 176
MS.gene49199.t1 MTR_3g479490 28.571 490 285 16 6 448 2 473 1.08e-49 176
MS.gene49199.t1 MTR_6g014170 28.542 480 274 14 10 448 10 461 2.12e-49 175
MS.gene49199.t1 MTR_6g014200 28.279 488 291 13 6 448 3 476 3.47e-49 174
MS.gene49199.t1 MTR_5g058320 28.302 477 282 15 10 448 10 464 4.06e-49 174
MS.gene49199.t1 MTR_7g102460 28.601 486 302 13 4 448 3 484 5.31e-49 175
MS.gene49199.t1 MTR_7g011470 28.125 480 280 15 10 448 10 465 8.18e-49 173
MS.gene49199.t1 MTR_8g083290 27.389 471 297 14 11 448 5 463 2.26e-48 172
MS.gene49199.t1 MTR_5g016480 28.998 469 281 12 18 448 16 470 2.56e-48 172
MS.gene49199.t1 MTR_6g014050 27.893 484 290 13 10 448 11 480 3.82e-48 172
MS.gene49199.t1 MTR_3g479470 28.337 487 279 16 10 447 13 478 4.69e-48 172
MS.gene49199.t1 MTR_7g102490 28.195 493 299 14 3 448 2 486 6.20e-48 172
MS.gene49199.t1 MTR_7g011470 27.917 480 277 15 10 448 10 461 1.96e-47 169
MS.gene49199.t1 MTR_0288s0020 28.216 482 272 15 10 448 10 460 3.88e-47 169
MS.gene49199.t1 MTR_4g094920 29.935 461 276 17 19 448 35 479 2.34e-46 167
MS.gene49199.t1 MTR_1g107380 30.812 357 217 11 112 448 126 472 1.07e-45 165
MS.gene49199.t1 MTR_1g107365 27.311 476 292 12 4 448 39 491 1.50e-45 165
MS.gene49199.t1 MTR_8g088560 27.233 459 303 10 10 448 10 457 1.96e-45 164
MS.gene49199.t1 MTR_7g013200 27.195 467 282 14 7 446 2 437 3.17e-45 163
MS.gene49199.t1 MTR_5g070090 29.645 479 273 19 10 450 11 463 3.93e-45 163
MS.gene49199.t1 MTR_8g064870 29.142 501 257 19 11 450 12 475 5.41e-45 163
MS.gene49199.t1 MTR_3g479520 27.479 484 290 15 10 448 15 482 6.04e-45 163
MS.gene49199.t1 MTR_7g070660 28.211 475 305 13 9 450 10 481 7.11e-45 163
MS.gene49199.t1 MTR_6g014150 26.860 484 295 13 10 448 7 476 9.13e-45 163
MS.gene49199.t1 MTR_3g069710 28.448 464 285 10 11 450 13 453 9.85e-45 162
MS.gene49199.t1 MTR_5g098930 28.092 477 289 14 11 448 6 467 2.05e-44 162
MS.gene49199.t1 MTR_1g107285 28.151 476 283 14 11 448 9 463 2.20e-44 162
MS.gene49199.t1 MTR_4g024020 27.108 498 293 13 6 448 5 487 2.77e-44 162
MS.gene49199.t1 MTR_7g070610 27.743 483 300 15 10 450 13 488 4.09e-44 161
MS.gene49199.t1 MTR_3g049970 27.664 488 293 17 4 450 3 471 1.77e-43 159
MS.gene49199.t1 MTR_1g107375 28.051 467 301 10 3 448 1 453 1.79e-43 159
MS.gene49199.t1 MTR_3g069690 26.709 468 294 12 9 450 7 451 2.02e-43 159
MS.gene49199.t1 MTR_0184s0040 27.311 476 289 15 10 446 21 478 2.97e-43 159
MS.gene49199.t1 MTR_0078s0190 27.311 476 289 15 10 446 21 478 2.97e-43 159
MS.gene49199.t1 MTR_8g027870 30.444 473 261 14 11 441 19 465 4.97e-43 158
MS.gene49199.t1 MTR_1g107360 28.661 478 291 14 4 449 3 462 5.51e-43 158
MS.gene49199.t1 MTR_8g027885 28.953 487 250 13 11 441 19 465 5.55e-43 158
MS.gene49199.t1 MTR_7g071040 27.766 479 305 12 10 450 17 492 6.33e-43 158
MS.gene49199.t1 MTR_8g009073 28.211 475 283 14 6 441 2 457 1.66e-42 156
MS.gene49199.t1 MTR_6g014300 26.360 478 289 16 10 448 12 465 4.65e-42 155
MS.gene49199.t1 MTR_1g032490 28.659 492 267 17 10 448 10 470 5.76e-42 155
MS.gene49199.t1 MTR_6g014240 26.471 476 277 15 10 448 7 446 2.14e-41 153
MS.gene49199.t1 MTR_8g009063 27.143 490 290 15 1 444 1 469 2.61e-41 153
MS.gene49199.t1 MTR_1g107315 29.184 490 285 16 3 450 1 470 4.15e-41 153
MS.gene49199.t1 MTR_8g008970 26.383 470 298 11 6 441 2 457 4.33e-41 156
MS.gene49199.t1 MTR_8g008970 34.842 221 124 7 229 441 573 781 6.12e-27 114
MS.gene49199.t1 MTR_8g009067 26.681 476 297 12 6 445 2 461 5.67e-41 152
MS.gene49199.t1 MTR_8g009050 25.577 477 301 12 6 444 2 462 8.70e-41 152
MS.gene49199.t1 MTR_5g090700 26.735 490 292 14 9 448 4 476 1.00e-40 152
MS.gene49199.t1 MTR_5g090630 26.415 477 299 11 9 448 4 465 1.18e-40 151
MS.gene49199.t1 MTR_1g019510 26.834 477 292 14 6 444 2 459 1.56e-40 151
MS.gene49199.t1 MTR_1g107350 28.542 487 282 17 6 448 4 468 1.58e-40 151
MS.gene49199.t1 MTR_6g033675 27.350 468 280 15 11 437 5 453 1.89e-40 151
MS.gene49199.t1 MTR_7g070780 27.950 483 298 15 10 450 11 485 2.65e-40 151
MS.gene49199.t1 MTR_3g009510 27.010 485 287 18 11 445 6 473 2.70e-40 150
MS.gene49199.t1 MTR_7g055710 28.000 475 302 15 10 447 11 482 3.74e-40 150
MS.gene49199.t1 MTR_7g070930 26.875 480 308 13 10 450 14 489 4.56e-40 150
MS.gene49199.t1 MTR_8g009055 26.695 472 296 13 6 441 2 459 6.43e-40 149
MS.gene49199.t1 MTR_8g008990 26.471 476 294 12 6 441 2 461 7.88e-40 149
MS.gene49199.t1 MTR_3g479610 31.046 306 180 8 163 448 18 312 1.67e-39 145
MS.gene49199.t1 MTR_0078s0010 27.140 479 291 16 10 448 6 466 2.20e-39 148
MS.gene49199.t1 MTR_7g102520 27.066 484 305 15 10 450 12 490 2.61e-39 148
MS.gene49199.t1 MTR_8g009073 31.343 335 189 9 133 441 9 328 2.78e-39 145
MS.gene49199.t1 MTR_5g090660 25.934 482 302 10 9 448 4 472 3.80e-39 149
MS.gene49199.t1 MTR_5g087620 27.898 509 272 21 10 448 10 493 9.59e-39 146
MS.gene49199.t1 MTR_6g033725 26.681 476 270 17 11 437 5 450 1.79e-38 145
MS.gene49199.t1 MTR_0536s0020 26.947 475 290 16 14 448 22 479 1.93e-38 145
MS.gene49199.t1 MTR_0477s0010 27.920 351 190 9 122 448 5 316 2.25e-38 142
MS.gene49199.t1 MTR_7g013180 27.350 468 279 17 10 446 5 442 2.90e-38 144
MS.gene49199.t1 MTR_5g031830 27.366 486 283 17 10 450 12 472 3.02e-38 145
MS.gene49199.t1 MTR_7g013220 25.895 475 289 14 7 446 2 448 4.61e-38 144
MS.gene49199.t1 MTR_7g070940 27.197 478 299 15 10 450 9 474 7.85e-38 144
MS.gene49199.t1 MTR_8g066610 25.767 489 297 18 10 450 9 479 9.29e-38 144
MS.gene49199.t1 MTR_7g070800 27.835 485 301 15 6 450 2 477 9.65e-38 144
MS.gene49199.t1 MTR_7g070860 28.085 470 297 12 10 450 7 464 1.01e-37 143
MS.gene49199.t1 MTR_8g064880 28.773 497 278 17 6 450 5 477 1.85e-37 143
MS.gene49199.t1 MTR_7g047030 27.021 470 289 15 10 441 6 459 1.90e-37 142
MS.gene49199.t1 MTR_7g047270 27.021 470 289 15 10 441 6 459 1.90e-37 142
MS.gene49199.t1 MTR_7g102450 25.820 488 286 14 10 448 11 471 2.03e-37 142
MS.gene49199.t1 MTR_0078s0060 26.250 480 293 17 10 448 6 465 2.03e-37 142
MS.gene49199.t1 MTR_8g009067 29.882 338 198 8 133 445 20 343 2.21e-37 140
MS.gene49199.t1 MTR_5g072825 71.111 90 21 2 10 99 10 94 2.70e-37 132
MS.gene49199.t1 MTR_4g485630 27.607 489 284 16 10 450 9 475 3.25e-37 142
MS.gene49199.t1 MTR_5g031840 25.941 478 298 15 10 450 5 463 6.39e-37 141
MS.gene49199.t1 MTR_4g117890 27.311 476 283 15 14 446 17 472 8.51e-37 141
MS.gene49199.t1 MTR_7g102560 25.773 485 304 11 10 448 9 483 9.86e-37 141
MS.gene49199.t1 MTR_5g090600 27.311 476 284 14 9 448 4 453 1.09e-36 140
MS.gene49199.t1 MTR_1g062380 25.207 484 311 12 10 448 16 493 2.42e-36 140
MS.gene49199.t1 MTR_7g117405 27.345 501 274 16 8 448 10 480 3.09e-36 139
MS.gene49199.t1 MTR_7g070910 26.434 488 300 15 10 450 11 486 4.59e-36 139
MS.gene49199.t1 MTR_8g006730 26.415 477 289 19 10 444 6 462 4.86e-36 139
MS.gene49199.t1 MTR_4g485620 27.187 423 262 15 61 450 47 456 5.20e-36 138
MS.gene49199.t1 MTR_6g014190 29.530 298 180 7 169 448 1 286 5.65e-36 134
MS.gene49199.t1 MTR_7g070810 26.625 477 306 16 10 450 9 477 1.06e-35 138
MS.gene49199.t1 MTR_2g040530 24.686 478 303 10 11 449 6 465 1.45e-35 137
MS.gene49199.t1 MTR_5g090670 26.477 491 292 18 9 448 4 476 2.18e-35 137
MS.gene49199.t1 MTR_8g043470 24.570 407 237 10 65 448 18 377 2.19e-35 135
MS.gene49199.t1 MTR_1g029540 26.782 463 290 15 15 449 19 460 2.53e-35 136
MS.gene49199.t1 MTR_5g031860 26.305 479 296 14 10 450 12 471 3.06e-35 136
MS.gene49199.t1 MTR_7g117170 26.004 473 288 13 11 441 16 468 3.12e-35 137
MS.gene49199.t1 MTR_5g090620 25.103 486 304 13 9 448 4 475 3.54e-35 136
MS.gene49199.t1 MTR_7g070740 26.403 481 308 13 10 450 11 485 7.50e-35 135
MS.gene49199.t1 MTR_5g019580 27.721 487 287 19 10 447 7 477 8.05e-35 135
MS.gene49199.t1 MTR_8g077590 27.789 475 282 16 10 444 9 462 8.92e-35 135
MS.gene49199.t1 MTR_4g031800 25.364 481 302 14 11 450 10 474 2.17e-34 134
MS.gene49199.t1 MTR_8g006710 26.694 487 284 20 11 450 7 467 2.22e-34 134
MS.gene49199.t1 MTR_5g019580 31.157 337 187 13 143 447 178 501 2.26e-34 135
MS.gene49199.t1 MTR_6g014160 27.597 308 178 10 77 364 75 357 2.27e-34 132
MS.gene49199.t1 MTR_4g064987 28.112 466 280 15 11 450 9 445 2.45e-34 134
MS.gene49199.t1 MTR_8g074550 26.403 481 292 14 9 437 7 477 4.52e-34 134
MS.gene49199.t1 MTR_8g465670 24.740 481 295 16 11 445 8 467 4.71e-34 133
MS.gene49199.t1 MTR_7g013240 24.783 460 295 13 10 446 6 437 5.26e-34 132
MS.gene49199.t1 MTR_5g070040 28.233 464 280 17 9 437 10 455 8.91e-34 132
MS.gene49199.t1 MTR_7g013260 25.161 465 288 14 10 446 6 438 9.31e-34 132
MS.gene49199.t1 MTR_4g064987 28.145 469 282 16 11 450 9 451 9.79e-34 132
MS.gene49199.t1 MTR_7g102550 25.208 480 313 13 10 447 9 484 1.19e-33 132
MS.gene49199.t1 MTR_6g078320 26.804 485 273 20 8 436 9 467 1.32e-33 132
MS.gene49199.t1 MTR_5g090610 24.262 474 308 10 9 448 4 460 1.66e-33 131
MS.gene49199.t1 MTR_4g108250 25.514 486 310 14 10 450 11 489 2.81e-33 131
MS.gene49199.t1 MTR_6g023665 26.415 477 285 18 11 444 14 467 3.23e-33 131
MS.gene49199.t1 MTR_4g082820 28.601 479 282 16 6 445 3 460 5.35e-33 130
MS.gene49199.t1 MTR_6g005600 31.922 307 162 8 166 441 170 460 6.24e-33 130
MS.gene49199.t1 MTR_5g045960 25.948 501 285 18 10 448 9 485 6.78e-33 130
MS.gene49199.t1 MTR_0891s0010 29.333 300 181 9 169 448 1 289 6.91e-33 126
MS.gene49199.t1 MTR_5g045970 24.949 493 300 15 10 448 16 492 7.53e-33 130
MS.gene49199.t1 MTR_6g488280 26.195 481 281 17 11 444 7 460 9.09e-33 129
MS.gene49199.t1 MTR_0428s0010 26.195 481 281 17 11 444 7 460 9.09e-33 129
MS.gene49199.t1 MTR_8g006260 28.846 312 179 6 160 442 166 463 2.98e-32 128
MS.gene49199.t1 MTR_7g046490 29.619 341 201 10 130 446 136 461 5.66e-32 127
MS.gene49199.t1 MTR_4g117960 26.042 480 296 15 14 448 15 480 9.33e-32 127
MS.gene49199.t1 MTR_4g117980 26.337 486 288 16 14 448 15 481 1.07e-31 127
MS.gene49199.t1 MTR_6g033660 27.859 341 203 10 123 437 129 452 1.25e-31 126
MS.gene49199.t1 MTR_5g016660 26.992 389 244 10 94 450 105 485 2.05e-31 126
MS.gene49199.t1 MTR_6g035185 24.059 478 310 14 14 448 15 482 2.33e-31 125
MS.gene49199.t1 MTR_8g012650 35.341 249 122 7 229 450 237 473 3.70e-31 125
MS.gene49199.t1 MTR_8g007585 34.804 204 114 3 254 448 198 391 5.43e-31 123
MS.gene49199.t1 MTR_4g082810 31.000 300 172 10 110 381 110 402 5.52e-31 123
MS.gene49199.t1 MTR_0184s0030 25.259 483 288 15 10 444 6 463 6.42e-31 124
MS.gene49199.t1 MTR_8g012635 34.400 250 123 7 229 450 237 473 1.08e-30 124
MS.gene49199.t1 MTR_2g098430 26.069 491 288 19 11 446 7 477 1.13e-30 124
MS.gene49199.t1 MTR_5g090580 24.846 487 303 14 9 448 4 474 1.56e-30 123
MS.gene49199.t1 MTR_8g012745 27.568 370 221 10 108 444 109 464 1.59e-30 123
MS.gene49199.t1 MTR_4g118000 24.788 472 297 17 14 448 16 466 2.05e-30 123
MS.gene49199.t1 MTR_8g006220 24.694 490 293 17 11 445 7 475 2.98e-30 122
MS.gene49199.t1 MTR_2g046820 30.855 269 151 7 205 449 206 463 3.38e-30 122
MS.gene49199.t1 MTR_2g046750 30.000 270 152 6 205 449 209 466 7.31e-30 121
MS.gene49199.t1 MTR_2g035020 25.562 489 294 13 11 448 12 481 7.99e-30 121
MS.gene49199.t1 MTR_5g039900 27.346 373 240 9 105 450 117 485 8.63e-30 121
MS.gene49199.t1 MTR_8g466240 26.050 476 287 18 10 449 8 454 9.30e-30 120
MS.gene49199.t1 MTR_6g033625 23.769 467 298 12 11 437 5 453 1.02e-29 120
MS.gene49199.t1 MTR_8g090095 29.536 474 272 22 15 449 30 480 1.06e-29 121
MS.gene49199.t1 MTR_0009s0240 23.028 469 310 13 9 445 6 455 1.73e-29 120
MS.gene49199.t1 MTR_6g033615 24.736 473 272 14 11 437 5 439 1.91e-29 120
MS.gene49199.t1 MTR_8g044140 26.598 391 250 12 90 450 67 450 5.46e-29 119
MS.gene49199.t1 MTR_6g013680 25.362 414 225 15 65 448 15 374 5.57e-29 117
MS.gene49199.t1 MTR_7g070870 24.788 472 294 14 10 450 19 460 9.51e-29 118
MS.gene49199.t1 MTR_8g012630 36.279 215 104 5 256 444 204 411 1.57e-28 117
MS.gene49199.t1 MTR_1g019520 32.864 213 115 4 254 444 2 208 1.90e-28 112
MS.gene49199.t1 MTR_8g012730 36.207 232 110 6 239 444 85 304 2.39e-28 114
MS.gene49199.t1 MTR_6g035295 26.963 382 229 12 106 450 118 486 2.42e-28 117
MS.gene49199.t1 MTR_6g035265 23.950 476 306 17 14 449 15 474 4.38e-28 116
MS.gene49199.t1 MTR_8g071070 22.614 482 304 15 10 445 7 465 1.09e-27 115
MS.gene49199.t1 MTR_5g040030 27.154 383 228 14 106 450 120 489 1.39e-27 115
MS.gene49199.t1 MTR_8g006270 26.989 352 215 9 125 446 122 461 2.44e-27 114
MS.gene49199.t1 MTR_2g035040 27.851 377 221 11 110 448 23 386 2.47e-27 113
MS.gene49199.t1 MTR_5g067170 23.750 480 306 13 14 448 15 479 2.65e-27 114
MS.gene49199.t1 MTR_7g071050 25.926 459 254 15 10 431 13 422 4.52e-27 113
MS.gene49199.t1 MTR_1g040310 26.893 383 241 12 99 450 111 485 5.08e-27 113
MS.gene49199.t1 MTR_4g117950 23.355 471 307 13 14 448 10 462 5.50e-27 113
MS.gene49199.t1 MTR_5g027210 23.377 462 274 14 11 409 5 449 6.76e-27 113
MS.gene49199.t1 MTR_2g034990 24.583 480 304 16 14 448 15 481 1.56e-26 112
MS.gene49199.t1 MTR_5g098960 22.951 427 296 9 11 409 8 429 1.85e-26 111
MS.gene49199.t1 MTR_8g032950 28.000 300 175 10 184 448 187 480 2.47e-26 111
MS.gene49199.t1 MTR_0536s0010 28.417 278 162 8 201 448 206 476 4.03e-26 110
MS.gene49199.t1 MTR_2g008220 25.602 457 284 18 10 431 14 449 6.36e-26 110
MS.gene49199.t1 MTR_2g059240 23.941 472 310 14 10 448 13 468 6.75e-26 110
MS.gene49199.t1 MTR_4g485640 25.000 476 306 18 5 445 204 663 8.28e-26 110
MS.gene49199.t1 MTR_7g012120 28.723 282 168 8 196 448 206 483 2.05e-25 108
MS.gene49199.t1 MTR_7g470610 27.698 278 166 6 120 378 5 266 2.41e-25 105
MS.gene49199.t1 MTR_7g070583 27.698 278 166 6 120 378 5 266 2.41e-25 105
MS.gene49199.t1 MTR_4g485590 24.444 405 235 12 10 378 9 378 4.76e-25 107
MS.gene49199.t1 MTR_5g004940 31.416 226 114 6 234 448 182 377 2.39e-24 104
MS.gene49199.t1 MTR_8g007565 24.944 445 290 14 10 422 7 439 3.31e-24 105
MS.gene49199.t1 MTR_7g080960 29.148 223 105 3 232 448 295 470 4.04e-24 105
MS.gene49199.t1 MTR_7g039550 29.572 257 145 8 222 450 15 263 4.56e-24 101
MS.gene49199.t1 MTR_8g007650 24.944 445 290 14 10 422 7 439 5.65e-24 104
MS.gene49199.t1 MTR_6g014186 22.727 484 277 17 10 448 7 438 8.28e-24 103
MS.gene49199.t1 MTR_6g014185 29.921 254 144 5 199 448 121 344 1.30e-23 102
MS.gene49199.t1 MTR_7g067120 28.821 229 149 6 202 426 189 407 3.88e-23 101
MS.gene49199.t1 MTR_5g066410 25.566 442 268 17 14 422 2 415 6.06e-23 101
MS.gene49199.t1 MTR_5g066390 33.333 195 107 5 263 448 34 214 7.02e-23 96.7
MS.gene49199.t1 MTR_7g067330 22.738 431 287 16 10 426 9 407 7.78e-23 100
MS.gene49199.t1 MTR_8g068330 23.125 480 313 18 6 450 4 462 9.63e-23 100
MS.gene49199.t1 MTR_7g070760 30.726 179 104 2 206 378 34 198 9.80e-23 96.3
MS.gene49199.t1 MTR_5g029800 31.193 218 127 6 253 448 261 477 2.12e-22 99.8
MS.gene49199.t1 MTR_4g128690 22.432 477 311 17 3 450 8 454 5.12e-22 98.6
MS.gene49199.t1 MTR_2g008225 23.950 476 297 21 10 448 15 462 5.68e-22 98.6
MS.gene49199.t1 MTR_5g072827 82.692 52 9 0 398 449 35 86 1.15e-21 89.7
MS.gene49199.t1 MTR_2086s0010 31.073 177 102 5 282 448 5 171 6.97e-21 90.1
MS.gene49199.t1 MTR_1996s0010 31.073 177 102 5 282 448 5 171 6.97e-21 90.1
MS.gene49199.t1 MTR_4g128720 21.552 464 320 13 10 450 15 457 7.77e-21 95.1
MS.gene49199.t1 MTR_4g123553 23.129 441 299 14 10 426 15 439 9.94e-21 94.7
MS.gene49199.t1 MTR_6g036650 23.913 460 310 18 2 433 10 457 1.04e-20 94.7
MS.gene49199.t1 MTR_4g077960 28.159 277 174 8 166 426 149 416 1.08e-20 94.4
MS.gene49199.t1 MTR_4g059370 29.583 240 140 8 196 418 135 362 1.67e-20 93.2
MS.gene49199.t1 MTR_1g090270 25.431 464 260 19 4 418 9 435 1.01e-19 91.7
MS.gene49199.t1 MTR_6g042310 23.673 452 294 16 10 431 18 448 1.54e-19 91.3
MS.gene49199.t1 MTR_6g014000 37.405 131 72 2 314 444 31 151 1.81e-19 91.3
MS.gene49199.t1 MTR_2g008226 28.085 235 148 8 200 423 221 445 3.75e-19 90.1
MS.gene49199.t1 MTR_2g014900 24.036 441 284 13 8 417 5 425 3.79e-19 90.1
MS.gene49199.t1 MTR_1g107325 24.336 452 222 18 10 448 8 352 5.25e-19 88.6
MS.gene49199.t1 MTR_0536s0030 34.177 158 95 4 299 450 199 353 5.60e-19 88.6
MS.gene49199.t1 MTR_3g009490 29.630 189 104 5 282 446 3 186 7.67e-19 84.7
MS.gene49199.t1 MTR_8g009840 31.937 191 95 6 277 441 337 518 1.35e-18 88.6
MS.gene49199.t1 MTR_2g046620 27.007 274 181 9 166 426 173 440 1.77e-18 87.8
MS.gene49199.t1 MTR_8g068340 25.188 266 176 8 172 424 189 444 2.53e-18 87.4
MS.gene49199.t1 MTR_7g070995 34.932 146 88 4 311 450 2 146 2.68e-18 82.0
MS.gene49199.t1 MTR_8g056740 36.029 136 79 3 251 378 163 298 1.27e-17 84.7
MS.gene49199.t1 MTR_8g068360 26.778 239 152 9 199 424 215 443 3.37e-17 84.0
MS.gene49199.t1 MTR_5g090690 30.556 144 75 3 229 350 166 306 1.08e-15 79.0
MS.gene49199.t1 MTR_2g083390 24.249 433 280 17 10 424 8 410 9.14e-15 76.3
MS.gene49199.t1 MTR_2g083380 29.004 231 134 7 210 424 235 451 2.63e-14 75.1
MS.gene49199.t1 MTR_2g083480 25.311 241 150 6 200 424 208 434 6.53e-14 73.9
MS.gene49199.t1 MTR_3g435310 29.121 182 110 7 254 423 221 395 1.13e-13 73.2
MS.gene49199.t1 MTR_4g079250 25.726 241 151 6 199 424 207 434 3.36e-13 71.6
MS.gene49199.t1 MTR_6g013435 22.905 358 197 12 118 448 1 306 4.34e-13 70.1
MS.gene49199.t1 MTR_4g079270 23.651 241 156 5 199 424 207 434 5.84e-13 70.9
MS.gene49199.t1 MTR_8g006230 26.087 207 143 4 102 303 45 246 1.82e-11 65.1
MS.gene49199.t1 MTR_6g013890 23.618 199 110 8 152 328 21 199 2.11e-11 64.3
MS.gene49199.t1 MTR_3g479620 30.000 160 91 6 10 154 6 159 3.88e-11 62.0
MS.gene49199.t1 MTR_2g083490 26.991 226 143 6 211 424 219 434 3.95e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49199.t1 AT2G30150 48.673 452 215 8 7 449 10 453 1.57e-147 428
MS.gene49199.t1 AT2G30150 48.315 445 213 8 14 449 1 437 1.86e-144 420
MS.gene49199.t1 AT2G30140 46.980 447 224 7 10 450 13 452 3.47e-139 407
MS.gene49199.t1 AT2G30140 47.098 448 223 7 10 450 13 453 7.36e-139 406
MS.gene49199.t1 AT2G28080 29.851 469 280 15 14 450 22 473 2.72e-64 215
MS.gene49199.t1 AT1G22400 30.290 482 276 16 10 446 13 479 4.22e-60 204
MS.gene49199.t1 AT1G22340 30.309 485 276 16 10 448 13 481 5.24e-60 204
MS.gene49199.t1 AT1G05675 29.828 466 277 14 10 446 6 450 2.14e-58 199
MS.gene49199.t1 AT1G22360 28.542 480 290 14 10 448 10 477 6.71e-58 198
MS.gene49199.t1 AT1G78270 28.571 483 286 14 10 448 13 480 7.57e-58 198
MS.gene49199.t1 AT1G05680 30.323 465 276 15 10 446 6 450 5.47e-57 195
MS.gene49199.t1 AT3G21560 29.053 475 291 13 10 450 12 474 1.32e-56 195
MS.gene49199.t1 AT1G22380 28.630 489 292 15 3 448 6 480 1.82e-56 194
MS.gene49199.t1 AT2G31750 30.277 469 281 14 7 448 5 454 2.37e-55 191
MS.gene49199.t1 AT1G22360 28.125 480 280 14 10 448 10 465 3.88e-55 190
MS.gene49199.t1 AT2G31750 30.277 469 281 14 7 448 5 454 5.91e-55 190
MS.gene49199.t1 AT1G05560 28.238 471 282 12 10 448 5 451 1.80e-54 189
MS.gene49199.t1 AT2G36970 25.678 479 298 12 10 448 10 470 3.02e-54 188
MS.gene49199.t1 AT4G15550 28.306 484 277 14 10 447 13 472 4.45e-54 187
MS.gene49199.t1 AT1G05560 28.238 471 282 12 10 448 55 501 5.53e-54 188
MS.gene49199.t1 AT4G15500 29.132 484 268 15 10 448 9 462 1.34e-53 186
MS.gene49199.t1 AT1G22370 27.463 477 294 11 10 448 13 475 3.35e-52 183
MS.gene49199.t1 AT4G15490 28.392 479 283 16 10 448 8 466 8.08e-52 182
MS.gene49199.t1 AT4G15480 27.975 479 290 14 10 450 19 480 1.26e-49 176
MS.gene49199.t1 AT2G31790 29.979 467 277 16 10 446 8 454 1.51e-49 175
MS.gene49199.t1 AT2G43840 29.284 461 283 16 10 448 7 446 4.84e-48 171
MS.gene49199.t1 AT2G43840 29.284 461 283 16 10 448 7 446 9.77e-48 170
MS.gene49199.t1 AT2G43820 28.233 464 288 13 10 450 7 448 2.10e-47 169
MS.gene49199.t1 AT1G24100 26.882 465 297 11 10 448 11 458 5.57e-47 168
MS.gene49199.t1 AT1G05530 25.641 468 301 8 10 448 5 454 1.18e-45 165
MS.gene49199.t1 AT2G23260 29.526 464 284 15 10 449 10 454 6.59e-45 162
MS.gene49199.t1 AT3G02100 28.511 470 286 14 10 450 13 461 6.61e-45 163
MS.gene49199.t1 AT2G23250 29.039 458 282 15 11 448 1 435 3.36e-44 160
MS.gene49199.t1 AT5G38040 29.348 460 268 15 18 448 18 449 1.30e-43 159
MS.gene49199.t1 AT3G53160 28.049 492 284 18 10 448 8 482 7.27e-43 158
MS.gene49199.t1 AT2G29740 28.986 483 285 13 9 448 7 474 9.35e-43 157
MS.gene49199.t1 AT5G59590 27.021 470 282 13 10 448 10 449 2.87e-42 155
MS.gene49199.t1 AT4G01070 26.638 473 286 14 10 441 8 460 4.55e-42 155
MS.gene49199.t1 AT1G10400 29.060 468 291 17 10 448 7 462 4.82e-42 155
MS.gene49199.t1 AT3G46660 29.211 469 277 14 11 450 15 457 5.37e-42 155
MS.gene49199.t1 AT2G36750 26.994 489 292 14 10 448 10 483 8.06e-42 155
MS.gene49199.t1 AT4G15280 26.680 491 287 13 10 448 4 473 2.18e-41 154
MS.gene49199.t1 AT5G05900 28.112 466 282 14 11 449 9 448 2.89e-41 152
MS.gene49199.t1 AT4G15280 26.680 491 287 13 10 448 36 505 4.20e-41 153
MS.gene49199.t1 AT3G21790 27.273 484 300 14 10 449 4 479 4.49e-41 153
MS.gene49199.t1 AT3G11340 26.623 462 292 13 11 450 10 446 5.41e-41 152
MS.gene49199.t1 AT3G46670 27.371 464 282 12 10 445 9 445 9.44e-41 151
MS.gene49199.t1 AT2G16890 29.237 472 288 18 10 448 9 467 2.08e-40 151
MS.gene49199.t1 AT2G36760 27.386 482 300 14 10 448 14 488 3.93e-40 150
MS.gene49199.t1 AT3G46690 27.015 459 291 12 10 445 9 446 9.39e-40 149
MS.gene49199.t1 AT2G36780 28.157 483 295 16 10 448 14 488 9.91e-40 149
MS.gene49199.t1 AT3G46700 26.304 460 298 11 10 450 9 446 2.21e-39 147
MS.gene49199.t1 AT4G14090 25.821 457 305 14 10 447 13 454 2.30e-39 147
MS.gene49199.t1 AT5G59580 27.350 468 282 14 10 448 9 447 6.71e-39 146
MS.gene49199.t1 AT5G05860 27.922 462 287 11 10 448 9 447 1.72e-38 145
MS.gene49199.t1 AT3G55700 30.029 343 206 10 123 450 129 452 2.37e-38 145
MS.gene49199.t1 AT2G36800 27.178 482 302 16 10 448 12 487 3.53e-38 145
MS.gene49199.t1 AT2G29750 28.125 480 292 14 9 448 7 473 5.88e-38 144
MS.gene49199.t1 AT5G38010 26.350 463 298 10 10 448 10 453 8.50e-38 143
MS.gene49199.t1 AT4G15260 27.747 364 210 8 122 448 7 354 3.35e-37 139
MS.gene49199.t1 AT3G21760 24.691 486 312 13 10 449 4 481 3.91e-37 142
MS.gene49199.t1 AT1G07260 27.366 486 292 16 7 448 3 471 1.88e-36 140
MS.gene49199.t1 AT5G05870 26.013 469 297 12 10 449 8 455 2.91e-36 139
MS.gene49199.t1 AT1G07250 28.779 344 220 8 123 448 136 472 3.63e-36 139
MS.gene49199.t1 AT1G01390 26.316 475 285 14 10 441 8 460 1.00e-35 138
MS.gene49199.t1 AT4G36770 26.509 464 280 13 9 431 3 446 1.16e-35 137
MS.gene49199.t1 AT1G01390 26.316 475 285 14 10 441 25 477 1.28e-35 138
MS.gene49199.t1 AT5G05890 26.013 469 297 11 10 450 8 454 2.22e-35 137
MS.gene49199.t1 AT2G36770 25.462 487 303 14 10 448 14 488 2.57e-35 137
MS.gene49199.t1 AT2G18570 30.132 302 176 6 165 441 168 459 3.70e-35 136
MS.gene49199.t1 AT5G14860 26.569 478 302 19 10 448 8 475 4.21e-35 136
MS.gene49199.t1 AT5G05880 25.910 467 296 12 10 450 8 450 6.73e-35 135
MS.gene49199.t1 AT4G34131 25.361 485 305 17 10 450 10 481 7.10e-35 135
MS.gene49199.t1 AT2G16890 29.756 410 246 15 10 387 9 408 9.54e-35 134
MS.gene49199.t1 AT3G46650 25.870 460 283 12 6 444 6 428 1.13e-34 134
MS.gene49199.t1 AT3G46720 26.096 456 288 12 11 445 10 437 1.44e-34 134
MS.gene49199.t1 AT3G21780 28.032 371 204 11 122 449 119 469 1.50e-34 135
MS.gene49199.t1 AT3G46680 25.427 468 289 14 10 446 9 447 2.91e-34 133
MS.gene49199.t1 AT3G21800 33.210 271 148 7 205 449 213 476 4.15e-34 133
MS.gene49199.t1 AT2G36790 26.220 492 293 14 10 448 13 487 7.39e-34 133
MS.gene49199.t1 AT2G18560 28.182 330 199 7 140 441 50 369 8.61e-34 130
MS.gene49199.t1 AT1G51210 24.773 440 294 15 2 423 12 432 1.22e-33 131
MS.gene49199.t1 AT2G29710 25.523 478 299 16 9 448 4 462 1.27e-33 132
MS.gene49199.t1 AT5G12890 26.501 483 294 19 10 445 10 478 1.29e-33 132
MS.gene49199.t1 AT2G29730 24.632 475 307 16 9 448 4 462 1.39e-33 132
MS.gene49199.t1 AT2G15480 23.494 498 327 16 1 450 1 492 1.55e-33 132
MS.gene49199.t1 AT3G53150 25.296 506 293 14 10 448 22 509 1.78e-33 132
MS.gene49199.t1 AT4G34138 25.000 480 309 14 10 449 11 479 2.42e-33 131
MS.gene49199.t1 AT5G03490 25.870 460 302 16 10 447 19 461 2.80e-33 131
MS.gene49199.t1 AT2G15480 23.469 490 327 16 1 450 1 482 6.21e-33 130
MS.gene49199.t1 AT5G26310 26.549 339 197 12 138 441 139 460 2.19e-32 129
MS.gene49199.t1 AT3G16520 28.406 345 212 10 122 445 126 456 3.07e-32 128
MS.gene49199.t1 AT3G21750 24.635 479 307 15 10 448 4 468 3.34e-32 128
MS.gene49199.t1 AT3G55710 26.910 301 195 6 164 450 167 456 3.99e-32 127
MS.gene49199.t1 AT1G01420 24.790 476 292 16 10 442 8 460 7.64e-32 127
MS.gene49199.t1 AT1G01420 24.790 476 292 16 10 442 11 463 9.42e-32 127
MS.gene49199.t1 AT1G22370 27.362 307 192 7 162 448 10 305 1.37e-31 123
MS.gene49199.t1 AT2G15490 24.532 481 315 16 10 450 7 479 1.65e-31 126
MS.gene49199.t1 AT2G15490 24.380 484 315 16 10 450 7 482 4.66e-31 125
MS.gene49199.t1 AT1G07240 27.684 354 217 10 122 448 134 475 5.47e-31 124
MS.gene49199.t1 AT3G50740 25.732 478 291 15 10 441 7 466 1.03e-30 124
MS.gene49199.t1 AT3G16520 28.704 324 196 10 122 424 126 435 2.18e-30 122
MS.gene49199.t1 AT3G16520 28.280 343 208 11 122 443 126 451 2.29e-30 122
MS.gene49199.t1 AT5G17040 22.030 463 315 13 7 448 2 439 1.05e-28 117
MS.gene49199.t1 AT5G66690 30.078 256 133 8 201 424 200 441 1.14e-28 118
MS.gene49199.t1 AT1G73880 25.212 472 305 16 10 450 14 468 1.92e-28 117
MS.gene49199.t1 AT5G37950 26.923 312 208 8 64 360 35 341 2.18e-28 115
MS.gene49199.t1 AT4G34135 26.132 486 301 17 10 450 11 483 4.37e-28 116
MS.gene49199.t1 AT2G26480 24.353 464 298 13 11 448 9 445 6.51e-28 115
MS.gene49199.t1 AT5G17050 22.601 469 313 15 10 448 12 460 4.65e-27 113
MS.gene49199.t1 AT5G37950 27.129 317 207 9 64 360 35 347 1.24e-26 110
MS.gene49199.t1 AT5G17030 22.718 471 305 14 10 448 12 455 1.03e-25 109
MS.gene49199.t1 AT5G49690 25.446 448 283 18 6 424 6 431 3.29e-25 108
MS.gene49199.t1 AT5G17040 26.275 255 168 7 201 448 96 337 7.24e-24 102
MS.gene49199.t1 AT3G22250 24.183 459 272 14 11 420 9 440 1.23e-23 103
MS.gene49199.t1 AT1G30530 21.720 465 312 14 10 448 12 450 1.87e-22 99.8
MS.gene49199.t1 AT5G65550 24.587 484 281 22 10 445 9 456 3.48e-22 99.4
MS.gene49199.t1 AT2G22590 23.457 486 296 20 5 445 9 463 5.63e-22 98.6
MS.gene49199.t1 AT1G06000 21.962 469 291 9 10 448 10 433 1.74e-21 96.7
MS.gene49199.t1 AT4G01070 25.962 312 198 10 10 302 8 305 1.71e-17 84.0
MS.gene49199.t1 AT1G64910 22.140 271 190 6 190 449 182 442 2.37e-13 72.0
MS.gene49199.t1 AT4G27570 23.970 267 170 7 197 448 195 443 2.57e-13 72.0
MS.gene49199.t1 AT2G16890 28.115 313 189 13 10 296 9 311 7.01e-13 69.7
MS.gene49199.t1 AT2G16890 28.115 313 189 13 10 296 9 311 7.01e-13 69.7
MS.gene49199.t1 AT1G64920 22.846 267 173 7 197 444 189 441 1.02e-11 67.0
MS.gene49199.t1 AT4G27560 23.830 235 152 5 197 417 195 416 2.47e-11 65.9
MS.gene49199.t1 AT5G53990 22.619 252 166 5 190 426 182 419 3.67e-11 65.5
MS.gene49199.t1 AT2G22930 22.868 258 174 6 202 448 194 437 5.21e-11 64.7

Find 118 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAATGATTTCGTCAATT+TGG 0.114963 5.4:+61382770 None:intergenic
ATTCCTCTATAGGTGGATTT+TGG 0.200389 5.4:-61382624 MS.gene49199:CDS
GAAAGGGGAATATAGATTTA+AGG 0.202145 5.4:+61382953 None:intergenic
AGAGCTTGTTAAGAGGTTTA+TGG 0.222847 5.4:-61382416 MS.gene49199:CDS
AGCTCTACTATATATTCTTT+TGG 0.224303 5.4:+61382433 None:intergenic
CCCTTTCCAGTCTATCCTAT+TGG 0.252701 5.4:-61382937 MS.gene49199:CDS
TTCAATGATTTCGTCAATTT+GGG 0.270600 5.4:+61382771 None:intergenic
AAGCGGATGGATTCCGGCTT+TGG 0.307222 5.4:+61384845 None:intergenic
GGGTTGATGTGTCCTCTTCC+TGG 0.309405 5.4:+61384968 None:intergenic
GAAGAATGGCTTGGCTTTAT+CGG 0.333748 5.4:-61384875 MS.gene49199:CDS
ATAGCCACGACTATATAAAA+TGG 0.342341 5.4:-61382861 MS.gene49199:CDS
TCTTGATCAACTTGAGTTGC+CGG 0.349946 5.4:-61384714 MS.gene49199:CDS
ATATTCCGGTGGCATCTCTT+TGG 0.354772 5.4:-61384631 MS.gene49199:CDS
GTGGCAAAGCGGATGGATTC+CGG 0.362522 5.4:+61384839 None:intergenic
AGATAGAGCAAGAGAACTTA+AGG 0.368648 5.4:-61382362 MS.gene49199:CDS
TCAGTGACATTTCGTCTTGA+AGG 0.377463 5.4:-61382279 None:intergenic
CGCTCCGGTGGAGCCACGTT+GGG 0.384156 5.4:+61384812 None:intergenic
GAGAAGAAGGTAATTTGCTT+TGG 0.386745 5.4:+61383014 None:intergenic
GTGTTGTCTCATTCCTCTAT+AGG 0.394372 5.4:-61382634 MS.gene49199:CDS
GCAGTTTCAGTTCCGCGTCT+AGG 0.400145 5.4:-61382795 MS.gene49199:CDS
ATGTGTCCTCTTCCTGGAAA+TGG 0.401745 5.4:+61384974 None:intergenic
GTTGTGGCGATGCCATTTCC+AGG 0.402813 5.4:-61384986 MS.gene49199:CDS
TCAAAACATGCAGCTCTCAT+TGG 0.407163 5.4:-61383055 MS.gene49199:CDS
AAAGGTGATAAGAATGTTGT+TGG 0.414883 5.4:+61384907 None:intergenic
GTAATTTGCTTTGGTAACCT+TGG 0.422290 5.4:+61383023 None:intergenic
TAAGGTACTGCAGGACCAAT+AGG 0.426052 5.4:+61382922 None:intergenic
GGCCTGTTGACGTTGGTAAT+CGG 0.431700 5.4:-61384658 MS.gene49199:CDS
CTCCGATTACCAACGTCAAC+AGG 0.436281 5.4:+61384656 None:intergenic
GTACTAAAATTGCTGATGAA+TGG 0.437074 5.4:-61382510 MS.gene49199:CDS
TCCGTGTTATACGTTTCATT+TGG 0.440218 5.4:-61382817 MS.gene49199:CDS
CGGTGGAGCCACGTTGGGTA+TGG 0.441130 5.4:+61384817 None:intergenic
CTCCATGTTCCATCATCTTG+AGG 0.442573 5.4:-61384588 MS.gene49199:CDS
GCAAGAGGGAATGTCAAAAT+TGG 0.442577 5.4:+61382553 None:intergenic
AAAGGGGAATATAGATTTAA+GGG 0.444531 5.4:+61382954 None:intergenic
ATATAGTAGAGCTTGTTAAG+AGG 0.445793 5.4:-61382423 MS.gene49199:CDS
GAAAGGAAAGTGTGGAGATA+AGG 0.456490 5.4:-61382689 MS.gene49199:CDS
CAGTTTCAGTTCCGCGTCTA+GGG 0.458755 5.4:-61382794 MS.gene49199:CDS
CCTTTGTAGTCACTGAAGAA+TGG 0.459358 5.4:-61384889 MS.gene49199:CDS
GCTCCAAAATCCACCTATAG+AGG 0.460288 5.4:+61382621 None:intergenic
CCAATAGGATAGACTGGAAA+GGG 0.462374 5.4:+61382937 None:intergenic
TTTCCCCACGAGCCACATAA+AGG 0.469804 5.4:+61382722 None:intergenic
TGGTAATCGGAGGAATATTC+CGG 0.470562 5.4:-61384645 MS.gene49199:CDS
CATACCCAACGTGGCTCCAC+CGG 0.471492 5.4:-61384816 MS.gene49199:CDS
CCGGAGCGGGAGAAAACTAT+AGG 0.479538 5.4:-61384797 MS.gene49199:CDS
CAACGTGGCTCCACCGGAGC+GGG 0.484608 5.4:-61384810 MS.gene49199:CDS
GTAGTCACTGAAGAATGGCT+TGG 0.486287 5.4:-61384884 MS.gene49199:CDS
AGACCTTGAAGAAAATAAAA+CGG 0.493373 5.4:-61382896 MS.gene49199:CDS
TGTCATAAAGCTATTGCTAA+AGG 0.496050 5.4:-61382334 MS.gene49199:CDS
TTGTGGATGGAATTCAACTT+TGG 0.499309 5.4:-61382596 MS.gene49199:CDS
AAAGGAAAGTGTGGAGATAA+GGG 0.501812 5.4:-61382688 MS.gene49199:CDS
GGAAATTGATCGTGGGCAAG+AGG 0.503423 5.4:+61382538 None:intergenic
CTAAAGGCGGATCCTCAGAT+AGG 0.505408 5.4:-61382318 MS.gene49199:CDS
ATATGAAGAGACGAAACTCC+TGG 0.507180 5.4:+61383114 None:intergenic
CGATACCTTTATGTGGCTCG+TGG 0.507530 5.4:-61382727 MS.gene49199:CDS
AGGTCTAAATAAGGTACTGC+AGG 0.514647 5.4:+61382913 None:intergenic
GTCAATTTGGGCCCTAGACG+CGG 0.520780 5.4:+61382783 None:intergenic
TGGAGCCACGTTGGGTATGG+TGG 0.522262 5.4:+61384820 None:intergenic
CTCATTGGAGTGCATTTCCA+AGG 0.524444 5.4:-61383040 MS.gene49199:CDS
CTTGCACTGTGGTGAGAAGA+AGG 0.524564 5.4:+61383001 None:intergenic
TTGTCTCATTCCTCTATAGG+TGG 0.525914 5.4:-61382631 MS.gene49199:CDS
CCGCTCCGGTGGAGCCACGT+TGG 0.526681 5.4:+61384811 None:intergenic
GAATTTGCATATGCTTAGCA+TGG 0.527023 5.4:+61384946 None:intergenic
AAGGTGATAAGAATGTTGTT+GGG 0.527182 5.4:+61384908 None:intergenic
ATATGTGCAGAGAACGTCCC+AGG 0.529066 5.4:-61383132 MS.gene49199:intron
GCAGGACCAATAGGATAGAC+TGG 0.531815 5.4:+61382931 None:intergenic
GATACCTTTATGTGGCTCGT+GGG 0.532351 5.4:-61382726 MS.gene49199:CDS
TGATGCTGCCATGACAAAGA+TGG 0.533974 5.4:-61384756 MS.gene49199:CDS
AACGTGACACACAGCATCGC+CGG 0.535414 5.4:+61385006 None:intergenic
AATTTGCATATGCTTAGCAT+GGG 0.535578 5.4:+61384947 None:intergenic
GCGATGCCATTTCCAGGAAG+AGG 0.537171 5.4:-61384980 MS.gene49199:CDS
GTGAAAAGACCTCAAGATGA+TGG 0.537515 5.4:+61384579 None:intergenic
TATCGGCAGCGATCCAAAGC+CGG 0.543018 5.4:-61384858 MS.gene49199:CDS
CGGCGCTTCCATCTTTGTCA+TGG 0.544293 5.4:+61384748 None:intergenic
TGATCAAGAAGCTGTTCAAA+CGG 0.551251 5.4:+61384728 None:intergenic
TTGCCGGTGAATGTGATTGT+TGG 0.552279 5.4:-61384698 MS.gene49199:CDS
TAAAGTTCGATACCTTTATG+TGG 0.557777 5.4:-61382734 MS.gene49199:CDS
GGGGAAACATCGAGGTTGAA+AGG 0.567051 5.4:-61382706 MS.gene49199:CDS
TACTATTAGGAAATTGATCG+TGG 0.567702 5.4:+61382530 None:intergenic
TCACCAACAATCACATTCAC+CGG 0.569932 5.4:+61384695 None:intergenic
TCTCCGGCAATGAATATCTC+CGG 0.572594 5.4:-61385025 None:intergenic
GGGTATGGTGGCAAAGCGGA+TGG 0.572658 5.4:+61384832 None:intergenic
GGAGTAAAATGACGCGGACA+TGG 0.581366 5.4:+61384607 None:intergenic
ATAAGGGAATGGTGATACCT+TGG 0.583101 5.4:-61382672 MS.gene49199:CDS
GACCTCAAGATGATGGAACA+TGG 0.591732 5.4:+61384586 None:intergenic
ATGGATCTTGAATGCCAAGA+GGG 0.598024 5.4:-61382397 MS.gene49199:CDS
GAAATTGATCGTGGGCAAGA+GGG 0.606801 5.4:+61382539 None:intergenic
TTCTGCGAACAACAGTTCGA+AGG 0.609443 5.4:+61383085 None:intergenic
ATACCTTTATGTGGCTCGTG+GGG 0.610118 5.4:-61382725 MS.gene49199:CDS
TATGAAGAGACGAAACTCCT+GGG 0.611475 5.4:+61383115 None:intergenic
TGCGTCGAGGTTCCTATCTG+AGG 0.618959 5.4:+61382306 None:intergenic
ACGTATAACACGGATTCAGA+TGG 0.620334 5.4:+61382826 None:intergenic
CACTTAACTCATGATAAGCT+AGG 0.623270 5.4:-61384548 MS.gene49199:intron
ACCAATAGGATAGACTGGAA+AGG 0.627929 5.4:+61382936 None:intergenic
CGATGCTGTGTGTCACGTTG+TGG 0.631177 5.4:-61385002 MS.gene49199:CDS
TTGGTGATGTTGAGCTGCGG+TGG 0.635841 5.4:-61384679 MS.gene49199:CDS
GCCAAATGAAACGTATAACA+CGG 0.637753 5.4:+61382816 None:intergenic
CTGTTGACGTTGGTAATCGG+AGG 0.645782 5.4:-61384655 MS.gene49199:CDS
ACTATTAGGAAATTGATCGT+GGG 0.647501 5.4:+61382531 None:intergenic
AGCTTCTAACTCTTGCACTG+TGG 0.650526 5.4:+61382990 None:intergenic
AAAGTGTGGAGATAAGGGAA+TGG 0.653428 5.4:-61382683 MS.gene49199:CDS
TCGAGGTTGAAAGGAAAGTG+TGG 0.653471 5.4:-61382697 MS.gene49199:CDS
CATAAAGCTATTGCTAAAGG+CGG 0.654547 5.4:-61382331 MS.gene49199:CDS
CTGCGGTGGCCTGTTGACGT+TGG 0.657872 5.4:-61384665 MS.gene49199:CDS
ATTTGCATATGCTTAGCATG+GGG 0.659532 5.4:+61384948 None:intergenic
CCATTCTTCAGTGACTACAA+AGG 0.659888 5.4:+61384889 None:intergenic
ATGGTCCAAAGAGATGCCAC+CGG 0.660199 5.4:+61384626 None:intergenic
CTTTGCCACCATACCCAACG+TGG 0.673055 5.4:-61384825 MS.gene49199:CDS
CCAACGTGGCTCCACCGGAG+CGG 0.682739 5.4:-61384811 MS.gene49199:CDS
CGTTGGGTATGGTGGCAAAG+CGG 0.685428 5.4:+61384828 None:intergenic
CAATAGGATAGACTGGAAAG+GGG 0.687084 5.4:+61382938 None:intergenic
TATGGATCTTGAATGCCAAG+AGG 0.697563 5.4:-61382398 MS.gene49199:CDS
TGGCTCGTGGGGAAACATCG+AGG 0.698899 5.4:-61382714 MS.gene49199:CDS
AAGTTGAATTCCATCCACAA+TGG 0.708055 5.4:+61382599 None:intergenic
TTGTTGGTGATGTTGAGCTG+CGG 0.713985 5.4:-61384682 MS.gene49199:CDS
TAATCGGAGGAATATTCCGG+TGG 0.717176 5.4:-61384642 MS.gene49199:CDS
ACTTTGAGTTGATCACACCA+AGG 0.731602 5.4:+61382655 None:intergenic
GAACATGGAGTAAAATGACG+CGG 0.733146 5.4:+61384601 None:intergenic
TGTCACTGATAAATGCGTCG+AGG 0.739450 5.4:+61382293 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATATTTTACATTTAAAAT+TGG + chr5.4:61382865-61382884 None:intergenic 10.0%
!! ATACAATTTAACACAAATAT+TGG + chr5.4:61384014-61384033 None:intergenic 15.0%
!! ATATATTTAACATCTCTAAT+TGG + chr5.4:61383844-61383863 None:intergenic 15.0%
!!! ATTTTTTTTTTCCTTAGAAA+AGG - chr5.4:61383893-61383912 MS.gene49199:intron 15.0%
!!! TATTTATATGACACATTTTA+GGG - chr5.4:61383642-61383661 MS.gene49199:intron 15.0%
!!! TTATTTATATGACACATTTT+AGG - chr5.4:61383641-61383660 MS.gene49199:intron 15.0%
!!! TTTTTTTTTTCCTTAGAAAA+GGG - chr5.4:61383894-61383913 MS.gene49199:intron 15.0%
!! TCTAAGGAAAAAAAAAATGA+AGG + chr5.4:61383891-61383910 None:intergenic 20.0%
!! TGTACAATTGCATTAATATT+CGG + chr5.4:61384132-61384151 None:intergenic 20.0%
!! TTGAAAATAATTCTAATCCA+CGG + chr5.4:61383332-61383351 None:intergenic 20.0%
!!! AAACTATAGGTAATTTTCAT+CGG - chr5.4:61382514-61382533 MS.gene49199:CDS 20.0%
!!! GTTACGACTTTATTTATATT+TGG - chr5.4:61383008-61383027 MS.gene49199:CDS 20.0%
!!! TTTTTTTTTCCTTAGAAAAG+GGG - chr5.4:61383895-61383914 MS.gene49199:intron 20.0%
! AAAGGGGAATATAGATTTAA+GGG + chr5.4:61384347-61384366 None:intergenic 25.0%
! AACATTAAGACTTATGAGTA+GGG + chr5.4:61383231-61383250 None:intergenic 25.0%
! AATACCTTAATCATGCATTA+TGG - chr5.4:61383985-61384004 MS.gene49199:intron 25.0%
! AGACCTTGAAGAAAATAAAA+CGG - chr5.4:61384402-61384421 MS.gene49199:intron 25.0%
! ATCAATACAAACGTAGTTAT+TGG + chr5.4:61382917-61382936 None:intergenic 25.0%
! CAAACTATTAATTAACTAGC+AGG + chr5.4:61382979-61382998 None:intergenic 25.0%
! TAACATTAAGACTTATGAGT+AGG + chr5.4:61383232-61383251 None:intergenic 25.0%
! TTCAATGATTTCGTCAATTT+GGG + chr5.4:61384530-61384549 None:intergenic 25.0%
!! AGCTCTACTATATATTCTTT+TGG + chr5.4:61384868-61384887 None:intergenic 25.0%
!! ATTTAAAATTGGAATCGTCT+CGG + chr5.4:61382854-61382873 None:intergenic 25.0%
!! TTTTCTTCAAGGTCTAAATA+AGG + chr5.4:61384397-61384416 None:intergenic 25.0%
!!! TCAGCAATTTTAGTACTATT+AGG + chr5.4:61384784-61384803 None:intergenic 25.0%
AAAAGTGACATTCATGTAGT+TGG - chr5.4:61382798-61382817 MS.gene49199:CDS 30.0%
AAAGGTGATAAGAATGTTGT+TGG + chr5.4:61382394-61382413 None:intergenic 30.0%
AAGGTGATAAGAATGTTGTT+GGG + chr5.4:61382393-61382412 None:intergenic 30.0%
AATTTGCATATGCTTAGCAT+GGG + chr5.4:61382354-61382373 None:intergenic 30.0%
ACATTAAGACTTATGAGTAG+GGG + chr5.4:61383230-61383249 None:intergenic 30.0%
ACGATAAATAAGTGTGGTTA+GGG - chr5.4:61383427-61383446 MS.gene49199:intron 30.0%
ACTATTAGGAAATTGATCGT+GGG + chr5.4:61384770-61384789 None:intergenic 30.0%
ATAGCCACGACTATATAAAA+TGG - chr5.4:61384437-61384456 MS.gene49199:intron 30.0%
ATTGCTGATGAATGGAAAAA+TGG - chr5.4:61384796-61384815 MS.gene49199:CDS 30.0%
CGATTAGCAATATATAAAGC+GGG + chr5.4:61383475-61383494 None:intergenic 30.0%
CTTCAATGATTTCGTCAATT+TGG + chr5.4:61384531-61384550 None:intergenic 30.0%
GAAAGGGGAATATAGATTTA+AGG + chr5.4:61384348-61384367 None:intergenic 30.0%
GAACAAATTCGGTCAAATTT+GGG + chr5.4:61383130-61383149 None:intergenic 30.0%
GATCCAAACTTGAACAAATT+CGG + chr5.4:61383141-61383160 None:intergenic 30.0%
GCGATTAGCAATATATAAAG+CGG + chr5.4:61383476-61383495 None:intergenic 30.0%
GTACTAAAATTGCTGATGAA+TGG - chr5.4:61384788-61384807 MS.gene49199:CDS 30.0%
GTTACCATAATGCATGATTA+AGG + chr5.4:61383992-61384011 None:intergenic 30.0%
TAAAGTTCGATACCTTTATG+TGG - chr5.4:61384564-61384583 MS.gene49199:CDS 30.0%
TACGATAAATAAGTGTGGTT+AGG - chr5.4:61383426-61383445 MS.gene49199:intron 30.0%
TACTAAGCATGTCAAGTTTA+AGG - chr5.4:61383948-61383967 MS.gene49199:intron 30.0%
TACTATTAGGAAATTGATCG+TGG + chr5.4:61384771-61384790 None:intergenic 30.0%
TACTCAAAGTAACTGTATGT+TGG + chr5.4:61383393-61383412 None:intergenic 30.0%
TAGTTAGCAAGAGAAAGAAA+TGG + chr5.4:61384066-61384085 None:intergenic 30.0%
TGAACAAATTCGGTCAAATT+TGG + chr5.4:61383131-61383150 None:intergenic 30.0%
TGATAAGCTAGGTAAGAAAT+AGG - chr5.4:61382761-61382780 MS.gene49199:CDS 30.0%
TGTCATAAAGCTATTGCTAA+AGG - chr5.4:61384964-61384983 MS.gene49199:CDS 30.0%
TTGCTGATGAATGGAAAAAT+GGG - chr5.4:61384797-61384816 MS.gene49199:CDS 30.0%
TTTGGTACGATAAATAAGTG+TGG - chr5.4:61383421-61383440 MS.gene49199:intron 30.0%
! ACAGTTACTTTGAGTAGTAA+TGG - chr5.4:61383397-61383416 MS.gene49199:intron 30.0%
! GAAGGAACTATATTTGTTAC+TGG + chr5.4:61383873-61383892 None:intergenic 30.0%
!! ACTTTGAGTAGTAATGGATT+TGG - chr5.4:61383403-61383422 MS.gene49199:intron 30.0%
!! ATATAGTAGAGCTTGTTAAG+AGG - chr5.4:61384875-61384894 MS.gene49199:CDS 30.0%
!! TCAAATTTGGGTTGGATAAT+CGG + chr5.4:61383118-61383137 None:intergenic 30.0%
!!! ACAAAATTTTAAGTTGACCG+TGG - chr5.4:61383312-61383331 MS.gene49199:intron 30.0%
!!! TTGCCGTTTTATTTTCTTCA+AGG + chr5.4:61384408-61384427 None:intergenic 30.0%
AAATTCGGTCAAATTTGGGT+TGG + chr5.4:61383126-61383145 None:intergenic 35.0%
AAGTTGAATTCCATCCACAA+TGG + chr5.4:61384702-61384721 None:intergenic 35.0%
ACTCGAGATATTAGCGAATT+TGG - chr5.4:61383811-61383830 MS.gene49199:intron 35.0%
AGATAGAGCAAGAGAACTTA+AGG - chr5.4:61384936-61384955 MS.gene49199:CDS 35.0%
ATCTAACAAGTCATGTACAG+AGG - chr5.4:61383500-61383519 MS.gene49199:intron 35.0%
ATGGAATCAACGAATTCACA+TGG - chr5.4:61383750-61383769 MS.gene49199:intron 35.0%
ATTTGCATATGCTTAGCATG+GGG + chr5.4:61382353-61382372 None:intergenic 35.0%
CACTTAACTCATGATAAGCT+AGG - chr5.4:61382750-61382769 MS.gene49199:CDS 35.0%
CATAAAGCTATTGCTAAAGG+CGG - chr5.4:61384967-61384986 MS.gene49199:CDS 35.0%
CGATAAATAAGTGTGGTTAG+GGG - chr5.4:61383428-61383447 MS.gene49199:intron 35.0%
GAATTTGCATATGCTTAGCA+TGG + chr5.4:61382355-61382374 None:intergenic 35.0%
GCCAAATGAAACGTATAACA+CGG + chr5.4:61384485-61384504 None:intergenic 35.0%
TCCGTGTTATACGTTTCATT+TGG - chr5.4:61384481-61384500 MS.gene49199:intron 35.0%
TCGTAAACTTCCAAACAACT+CGG + chr5.4:61383187-61383206 None:intergenic 35.0%
TGATCAAGAAGCTGTTCAAA+CGG + chr5.4:61382573-61382592 None:intergenic 35.0%
TGGAATCAACGAATTCACAT+GGG - chr5.4:61383751-61383770 MS.gene49199:intron 35.0%
TTGTGGATGGAATTCAACTT+TGG - chr5.4:61384702-61384721 MS.gene49199:CDS 35.0%
! AAAGGAAAGTGTGGAGATAA+GGG - chr5.4:61384610-61384629 MS.gene49199:CDS 35.0%
! AGTTTGTGATTGAGAGTGTA+AGG - chr5.4:61383572-61383591 MS.gene49199:intron 35.0%
! CTCTAATTTTCTTTCCCTCT+TGG + chr5.4:61384918-61384937 None:intergenic 35.0%
! TGACCGAATTTGTTCAAGTT+TGG - chr5.4:61383135-61383154 MS.gene49199:intron 35.0%
! TTTTCCTTACCCCTTTTCTA+AGG + chr5.4:61383907-61383926 None:intergenic 35.0%
! TTTTCCTTAGAAAAGGGGTA+AGG - chr5.4:61383900-61383919 MS.gene49199:intron 35.0%
!! AGAGCTTGTTAAGAGGTTTA+TGG - chr5.4:61384882-61384901 MS.gene49199:CDS 35.0%
!! ATTCCTCTATAGGTGGATTT+TGG - chr5.4:61384674-61384693 MS.gene49199:CDS 35.0%
!! CTAGCCATTTTATATAGTCG+TGG + chr5.4:61384444-61384463 None:intergenic 35.0%
!! GAGAACGTGTACTTTTAACT+TGG - chr5.4:61383607-61383626 MS.gene49199:intron 35.0%
!! GAGAAGAAGGTAATTTGCTT+TGG + chr5.4:61384287-61384306 None:intergenic 35.0%
!! GTAATTTGCTTTGGTAACCT+TGG + chr5.4:61384278-61384297 None:intergenic 35.0%
!!! ACATTTTAGGGTTTTCTAGG+TGG - chr5.4:61383654-61383673 MS.gene49199:intron 35.0%
!!! ACTTTGGACACTCTTTTTTC+TGG - chr5.4:61384718-61384737 MS.gene49199:CDS 35.0%
!!! GACACATTTTAGGGTTTTCT+AGG - chr5.4:61383651-61383670 MS.gene49199:intron 35.0%
AAAGTGTGGAGATAAGGGAA+TGG - chr5.4:61384615-61384634 MS.gene49199:CDS 40.0%
ACCAATAGGATAGACTGGAA+AGG + chr5.4:61384365-61384384 None:intergenic 40.0%
ACGTATAACACGGATTCAGA+TGG + chr5.4:61384475-61384494 None:intergenic 40.0%
ATAAGGGAATGGTGATACCT+TGG - chr5.4:61384626-61384645 MS.gene49199:CDS 40.0%
ATATGAAGAGACGAAACTCC+TGG + chr5.4:61384187-61384206 None:intergenic 40.0%
ATCGTTCGATTGTCATCATG+TGG - chr5.4:61383722-61383741 MS.gene49199:intron 40.0%
ATGGATCTTGAATGCCAAGA+GGG - chr5.4:61384901-61384920 MS.gene49199:CDS 40.0%
CAATAGGATAGACTGGAAAG+GGG + chr5.4:61384363-61384382 None:intergenic 40.0%
CCAATAGGATAGACTGGAAA+GGG + chr5.4:61384364-61384383 None:intergenic 40.0%
CCATTCTTCAGTGACTACAA+AGG + chr5.4:61382412-61382431 None:intergenic 40.0%
CCTTTGTAGTCACTGAAGAA+TGG - chr5.4:61382409-61382428 MS.gene49199:CDS 40.0%
CGTAAACTTCCAAACAACTC+GGG + chr5.4:61383186-61383205 None:intergenic 40.0%
CTGATGAATGGAAAAATGGG+TGG - chr5.4:61384800-61384819 MS.gene49199:CDS 40.0%
CTGCATCAAATTAACGATCG+TGG - chr5.4:61382944-61382963 MS.gene49199:CDS 40.0%
GAACATGGAGTAAAATGACG+CGG + chr5.4:61382700-61382719 None:intergenic 40.0%
GCAAGAGGGAATGTCAAAAT+TGG + chr5.4:61384748-61384767 None:intergenic 40.0%
GCTAATATCTCGAGTGACTA+CGG + chr5.4:61383806-61383825 None:intergenic 40.0%
GTGAAAAGACCTCAAGATGA+TGG + chr5.4:61382722-61382741 None:intergenic 40.0%
GTGACATTCATGTAGTTGGT+TGG - chr5.4:61382802-61382821 MS.gene49199:CDS 40.0%
GTGTTGTCTCATTCCTCTAT+AGG - chr5.4:61384664-61384683 MS.gene49199:CDS 40.0%
TATGAAGAGACGAAACTCCT+GGG + chr5.4:61384186-61384205 None:intergenic 40.0%
TATGGATCTTGAATGCCAAG+AGG - chr5.4:61384900-61384919 MS.gene49199:CDS 40.0%
TCAAAACATGCAGCTCTCAT+TGG - chr5.4:61384243-61384262 MS.gene49199:intron 40.0%
TCACCAACAATCACATTCAC+CGG + chr5.4:61382606-61382625 None:intergenic 40.0%
TGAATGGAAAAATGGGTGGA+AGG - chr5.4:61384804-61384823 MS.gene49199:CDS 40.0%
TGGTAATCGGAGGAATATTC+CGG - chr5.4:61382653-61382672 MS.gene49199:CDS 40.0%
TTGTCTCATTCCTCTATAGG+TGG - chr5.4:61384667-61384686 MS.gene49199:CDS 40.0%
TTTCGACGAGTAGTTCGTAT+TGG + chr5.4:61383163-61383182 None:intergenic 40.0%
! AATGAGAGCTGCATGTTTTG+AGG + chr5.4:61384244-61384263 None:intergenic 40.0%
! GAAAGGAAAGTGTGGAGATA+AGG - chr5.4:61384609-61384628 MS.gene49199:CDS 40.0%
! TCTTGATCAACTTGAGTTGC+CGG - chr5.4:61382584-61382603 MS.gene49199:CDS 40.0%
! TGTTGGGTTTTCGTGAGATT+AGG + chr5.4:61382377-61382396 None:intergenic 40.0%
! TTGTCATCATGTGGCATTGA+TGG - chr5.4:61383731-61383750 MS.gene49199:intron 40.0%
!! ACTTTGAGTTGATCACACCA+AGG + chr5.4:61384646-61384665 None:intergenic 40.0%
!! AGGTCTAAATAAGGTACTGC+AGG + chr5.4:61384388-61384407 None:intergenic 40.0%
!! GAAGAATGGCTTGGCTTTAT+CGG - chr5.4:61382423-61382442 MS.gene49199:CDS 40.0%
AACAAGTCATGTACAGAGGC+AGG - chr5.4:61383504-61383523 MS.gene49199:intron 45.0%
AAGTGTGGTTAGGGGTTTCT+TGG - chr5.4:61383436-61383455 MS.gene49199:intron 45.0%
ACCCACAATCTCGTAACTAG+GGG - chr5.4:61383064-61383083 MS.gene49199:CDS 45.0%
ACCCCTAGTTACGAGATTGT+GGG + chr5.4:61383068-61383087 None:intergenic 45.0%
AGCTTCTAACTCTTGCACTG+TGG + chr5.4:61384311-61384330 None:intergenic 45.0%
ATACCTTTATGTGGCTCGTG+GGG - chr5.4:61384573-61384592 MS.gene49199:CDS 45.0%
ATATTCCGGTGGCATCTCTT+TGG - chr5.4:61382667-61382686 MS.gene49199:CDS 45.0%
ATGTGTCCTCTTCCTGGAAA+TGG + chr5.4:61382327-61382346 None:intergenic 45.0%
CACCCACAATCTCGTAACTA+GGG - chr5.4:61383063-61383082 MS.gene49199:CDS 45.0%
CCCTTTCCAGTCTATCCTAT+TGG - chr5.4:61384361-61384380 MS.gene49199:intron 45.0%
CTCATTGGAGTGCATTTCCA+AGG - chr5.4:61384258-61384277 MS.gene49199:intron 45.0%
CTCCATGTTCCATCATCTTG+AGG - chr5.4:61382710-61382729 MS.gene49199:CDS 45.0%
GAAATTGATCGTGGGCAAGA+GGG + chr5.4:61384762-61384781 None:intergenic 45.0%
GATACCTTTATGTGGCTCGT+GGG - chr5.4:61384572-61384591 MS.gene49199:CDS 45.0%
GCTCCAAAATCCACCTATAG+AGG + chr5.4:61384680-61384699 None:intergenic 45.0%
GGATCTCGATCCAACAATCA+TGG + chr5.4:61382833-61382852 None:intergenic 45.0%
GGGTTGGATAATCGGTTGAA+CGG + chr5.4:61383110-61383129 None:intergenic 45.0%
GTAGTCACTGAAGAATGGCT+TGG - chr5.4:61382414-61382433 MS.gene49199:CDS 45.0%
TAATCGGAGGAATATTCCGG+TGG - chr5.4:61382656-61382675 MS.gene49199:CDS 45.0%
TCACCCACAATCTCGTAACT+AGG - chr5.4:61383062-61383081 MS.gene49199:CDS 45.0%
TCGAGGTTGAAAGGAAAGTG+TGG - chr5.4:61384601-61384620 MS.gene49199:CDS 45.0%
TGATGCTGCCATGACAAAGA+TGG - chr5.4:61382542-61382561 MS.gene49199:CDS 45.0%
TGGAACCTACCAAACCCTTT+GGG - chr5.4:61383674-61383693 MS.gene49199:intron 45.0%
TGTCACTGATAAATGCGTCG+AGG + chr5.4:61385008-61385027 None:intergenic 45.0%
TTCACATGGGTGTGCTCTTA+TGG - chr5.4:61383764-61383783 MS.gene49199:intron 45.0%
TTCTGCGAACAACAGTTCGA+AGG + chr5.4:61384216-61384235 None:intergenic 45.0%
TTGCCGGTGAATGTGATTGT+TGG - chr5.4:61382600-61382619 MS.gene49199:CDS 45.0%
! AAGAACCCAAAGGGTTTGGT+AGG + chr5.4:61383682-61383701 None:intergenic 45.0%
! CAAACCCTTTGGGTTCTTCT+CGG - chr5.4:61383684-61383703 MS.gene49199:intron 45.0%
! GTTGGCTCAACCATGATTGT+TGG - chr5.4:61382820-61382839 MS.gene49199:CDS 45.0%
!! GACCTCAAGATGATGGAACA+TGG + chr5.4:61382715-61382734 None:intergenic 45.0%
!! GAGTAGGGGTATTCACTAGT+CGG + chr5.4:61383216-61383235 None:intergenic 45.0%
!! TAAGGTACTGCAGGACCAAT+AGG + chr5.4:61384379-61384398 None:intergenic 45.0%
!! TTGTTGGTGATGTTGAGCTG+CGG - chr5.4:61382616-61382635 MS.gene49199:CDS 45.0%
!!! GATTTTGGAGCCATTGTGGA+TGG - chr5.4:61384689-61384708 MS.gene49199:CDS 45.0%
ATATGTGCAGAGAACGTCCC+AGG - chr5.4:61384166-61384185 MS.gene49199:intron 50.0%
ATGGTCCAAAGAGATGCCAC+CGG + chr5.4:61382675-61382694 None:intergenic 50.0%
CACCCCTAGTTACGAGATTG+TGG + chr5.4:61383069-61383088 None:intergenic 50.0%
CAGTTTCAGTTCCGCGTCTA+GGG - chr5.4:61384504-61384523 MS.gene49199:intron 50.0%
CGAGAAGAACCCAAAGGGTT+TGG + chr5.4:61383686-61383705 None:intergenic 50.0%
CGATACCTTTATGTGGCTCG+TGG - chr5.4:61384571-61384590 MS.gene49199:CDS 50.0%
CTAAAGGCGGATCCTCAGAT+AGG - chr5.4:61384980-61384999 MS.gene49199:CDS 50.0%
CTCCGATTACCAACGTCAAC+AGG + chr5.4:61382645-61382664 None:intergenic 50.0%
CTTGCACTGTGGTGAGAAGA+AGG + chr5.4:61384300-61384319 None:intergenic 50.0%
GCAGGACCAATAGGATAGAC+TGG + chr5.4:61384370-61384389 None:intergenic 50.0%
GGAAATTGATCGTGGGCAAG+AGG + chr5.4:61384763-61384782 None:intergenic 50.0%
GGAGTAAAATGACGCGGACA+TGG + chr5.4:61382694-61382713 None:intergenic 50.0%
GGGGAAACATCGAGGTTGAA+AGG - chr5.4:61384592-61384611 MS.gene49199:CDS 50.0%
GTGGAACCTACCAAACCCTT+TGG - chr5.4:61383673-61383692 MS.gene49199:intron 50.0%
GTTCTTCTCGGCGTGATATG+TGG - chr5.4:61383696-61383715 MS.gene49199:intron 50.0%
TCGTCGAAACCCGAGTTGTT+TGG - chr5.4:61383174-61383193 MS.gene49199:intron 50.0%
TTTCCCCACGAGCCACATAA+AGG + chr5.4:61384579-61384598 None:intergenic 50.0%
! CCTATAGTTTTCTCCCGCTC+CGG + chr5.4:61382504-61382523 None:intergenic 50.0%
!! CTCGTAACTAGGGGTGTTCA+CGG - chr5.4:61383073-61383092 MS.gene49199:CDS 50.0%
!! CTGTTGACGTTGGTAATCGG+AGG - chr5.4:61382643-61382662 MS.gene49199:CDS 50.0%
!! GGCCTGTTGACGTTGGTAAT+CGG - chr5.4:61382640-61382659 MS.gene49199:CDS 50.0%
!! TCGTAACTAGGGGTGTTCAC+GGG - chr5.4:61383074-61383093 MS.gene49199:CDS 50.0%
!!! GGTGGATTTTGGAGCCATTG+TGG - chr5.4:61384685-61384704 MS.gene49199:CDS 50.0%
AACGTGACACACAGCATCGC+CGG + chr5.4:61382295-61382314 None:intergenic 55.0%
ACAGAGGCAGGTCCTCATAG+CGG - chr5.4:61383516-61383535 MS.gene49199:intron 55.0%
CACGCCGAGAAGAACCCAAA+GGG + chr5.4:61383691-61383710 None:intergenic 55.0%
CCGGAGCGGGAGAAAACTAT+AGG - chr5.4:61382501-61382520 MS.gene49199:CDS 55.0%
CGATGCTGTGTGTCACGTTG+TGG - chr5.4:61382296-61382315 MS.gene49199:CDS 55.0%
CGGCGCTTCCATCTTTGTCA+TGG + chr5.4:61382553-61382572 None:intergenic 55.0%
CGTTGGGTATGGTGGCAAAG+CGG + chr5.4:61382473-61382492 None:intergenic 55.0%
CTTTGCCACCATACCCAACG+TGG - chr5.4:61382473-61382492 MS.gene49199:CDS 55.0%
GCAGTTTCAGTTCCGCGTCT+AGG - chr5.4:61384503-61384522 MS.gene49199:intron 55.0%
GTCAATTTGGGCCCTAGACG+CGG + chr5.4:61384518-61384537 None:intergenic 55.0%
TATCGGCAGCGATCCAAAGC+CGG - chr5.4:61382440-61382459 MS.gene49199:CDS 55.0%
TCACGCCGAGAAGAACCCAA+AGG + chr5.4:61383692-61383711 None:intergenic 55.0%
TGCGTCGAGGTTCCTATCTG+AGG + chr5.4:61384995-61385014 None:intergenic 55.0%
! AAGCGGATGGATTCCGGCTT+TGG + chr5.4:61382456-61382475 None:intergenic 55.0%
! ATAGTTTTCTCCCGCTCCGG+TGG + chr5.4:61382501-61382520 None:intergenic 55.0%
! GCGATGCCATTTCCAGGAAG+AGG - chr5.4:61382318-61382337 MS.gene49199:CDS 55.0%
! GTGGCAAAGCGGATGGATTC+CGG + chr5.4:61382462-61382481 None:intergenic 55.0%
! GTTGTGGCGATGCCATTTCC+AGG - chr5.4:61382312-61382331 MS.gene49199:CDS 55.0%
!! GGGTTGATGTGTCCTCTTCC+TGG + chr5.4:61382333-61382352 None:intergenic 55.0%
!! TTGGTGATGTTGAGCTGCGG+TGG - chr5.4:61382619-61382638 MS.gene49199:CDS 55.0%
AGAGGCAGGTCCTCATAGCG+GGG - chr5.4:61383518-61383537 MS.gene49199:intron 60.0%
CAGAGGCAGGTCCTCATAGC+GGG - chr5.4:61383517-61383536 MS.gene49199:intron 60.0%
CATACCCAACGTGGCTCCAC+CGG - chr5.4:61382482-61382501 MS.gene49199:CDS 60.0%
GGGTATGGTGGCAAAGCGGA+TGG + chr5.4:61382469-61382488 None:intergenic 60.0%
TGGAGCCACGTTGGGTATGG+TGG + chr5.4:61382481-61382500 None:intergenic 60.0%
TGGCTCGTGGGGAAACATCG+AGG - chr5.4:61384584-61384603 MS.gene49199:CDS 60.0%
!! CTAGGGGTGTTCACGGGTCT+AGG - chr5.4:61383080-61383099 MS.gene49199:CDS 60.0%
ACACCCTCACCCCCGCTATG+AGG + chr5.4:61383531-61383550 None:intergenic 65.0%
CGGTGGAGCCACGTTGGGTA+TGG + chr5.4:61382484-61382503 None:intergenic 65.0%
CTGCGGTGGCCTGTTGACGT+TGG - chr5.4:61382633-61382652 MS.gene49199:CDS 65.0%
GAGGCAGGTCCTCATAGCGG+GGG - chr5.4:61383519-61383538 MS.gene49199:intron 65.0%
! AGGTCCTCATAGCGGGGGTG+AGG - chr5.4:61383524-61383543 MS.gene49199:intron 65.0%
! GGTCCTCATAGCGGGGGTGA+GGG - chr5.4:61383525-61383544 MS.gene49199:intron 65.0%
CAACGTGGCTCCACCGGAGC+GGG - chr5.4:61382488-61382507 MS.gene49199:CDS 70.0%
CCAACGTGGCTCCACCGGAG+CGG - chr5.4:61382487-61382506 MS.gene49199:CDS 70.0%
CGCTCCGGTGGAGCCACGTT+GGG + chr5.4:61382489-61382508 None:intergenic 70.0%
CCGCTCCGGTGGAGCCACGT+TGG + chr5.4:61382490-61382509 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 61382282 61385038 61382282 ID=MS.gene49199
chr5.4 mRNA 61382282 61385038 61382282 ID=MS.gene49199.t1;Parent=MS.gene49199
chr5.4 exon 61384549 61385038 61384549 ID=MS.gene49199.t1.exon1;Parent=MS.gene49199.t1
chr5.4 CDS 61384549 61385038 61384549 ID=cds.MS.gene49199.t1;Parent=MS.gene49199.t1
chr5.4 exon 61382282 61383144 61382282 ID=MS.gene49199.t1.exon2;Parent=MS.gene49199.t1
chr5.4 CDS 61382282 61383144 61382282 ID=cds.MS.gene49199.t1;Parent=MS.gene49199.t1
Gene Sequence

>MS.gene49199

ATGAATATCTCCGGCGATGCTGTGTGTCACGTTGTGGCGATGCCATTTCCAGGAAGAGGACACATCAACCCCATGCTAAGCATATGCAAATTCCTAATCTCACGAAAACCCAACAACATTCTTATCACCTTTGTAGTCACTGAAGAATGGCTTGGCTTTATCGGCAGCGATCCAAAGCCGGAATCCATCCGCTTTGCCACCATACCCAACGTGGCTCCACCGGAGCGGGAGAAAACTATAGGTAATTTTCATCGGTTTTATGATGCTGCCATGACAAAGATGGAAGCGCCGTTTGAACAGCTTCTTGATCAACTTGAGTTGCCGGTGAATGTGATTGTTGGTGATGTTGAGCTGCGGTGGCCTGTTGACGTTGGTAATCGGAGGAATATTCCGGTGGCATCTCTTTGGACCATGTCCGCGTCATTTTACTCCATGTTCCATCATCTTGAGGTCTTTTCACGTCATCAACACTTAACTCATGATAAGCTAGGTAAGAAATAGGAATTCATGTAGTAAAAAAGTGACATTCATGTAGTTGGTTGGCTCAACCATGATTGTTGGATCGAGATCCGAGACGATTCCAATTTTAAATGTAAAATATTGAGTTTGAAAGTTGAACGTCTGATCTTGATCCAATAACTACGTTTGTATTGATTGCATGACTGCATCAAATTAACGATCGTGGTCAATCTGTCCTGCTAGTTAATTAATAGTTTGTTAATTTTAGTTACGACTTTATTTATATTTGGAGAAAAAAAACATAAATTTAAATAATATGCATCACCCACAATCTCGTAACTAGGGGTGTTCACGGGTCTAGGTGATCCGTTCAACCGATTATCCAACCCAAATTTGACCGAATTTGTTCAAGTTTGGATCCAATACGAACTACTCGTCGAAACCCGAGTTGTTTGGAAGTTTACGAGTTTGTCCGACTAGTGAATACCCCTACTCATAAGTCTTAATGTTATAGTTAAAAATGTTTAACTTAAGTCATATGATTTGTGATTTTAATTTTTGTTGACAGCATACAAAATTTTAAGTTGACCGTGGATTAGAATTATTTTCAAAAAATATTCTATTCTCATTTTAAAATTCTATAATTATTCCAACATACAGTTACTTTGAGTAGTAATGGATTTGGTACGATAAATAAGTGTGGTTAGGGGTTTCTTGGTTAGAGCAGACATCCCGCTTTATATATTGCTAATCGCTATTATCTAACAAGTCATGTACAGAGGCAGGTCCTCATAGCGGGGGTGAGGGTGTACTTGCAATCACTATCAAGTTAGTTTGTGATTGAGAGTGTAAGGTTTTAGTATTTAGAGAACGTGTACTTTTAACTTGGATCAAATGTGTTTATTTATATGACACATTTTAGGGTTTTCTAGGTGGAACCTACCAAACCCTTTGGGTTCTTCTCGGCGTGATATGTGGATCATCGTTCGATTGTCATCATGTGGCATTGATGGAATCAACGAATTCACATGGGTGTGCTCTTATGGATTCTCATAGCATACTCCGTAGTCACTCGAGATATTAGCGAATTTGGCTTGAATCCAATTAGAGATGTTAAATATATATTAAACCAGTAACAAATATAGTTCCTTCATTTTTTTTTTCCTTAGAAAAGGGGTAAGGAAAATTTCTCTTAAGTTGTGTAAGCTACTAAGCATGTCAAGTTTAAGGCATATGTAATTTCAAATACCTTAATCATGCATTATGGTAACCAATATTTGTGTTAAATTGTATTTGAGCTATACAAAGCTTAAAGATTCATTCCATTTCTTTCTCTTGCTAACTAGTAATATGAAGTGATACTTTTATTTATTGCATATCATCATCTGCCGAATATTAATGCAATTGTACATGACTGCATATCTAATATGTGCAGAGAACGTCCCAGGAGTTTCGTCTCTTCATATAGAAGACCTTCGAACTGTTGTTCGCAGAAACAATCCTCAAAACATGCAGCTCTCATTGGAGTGCATTTCCAAGGTTACCAAAGCAAATTACCTTCTTCTCACCACAGTGCAAGAGTTAGAAGCTGAAGCAATTGATACCCTTAAATCTATATTCCCCTTTCCAGTCTATCCTATTGGTCCTGCAGTACCTTATTTAGACCTTGAAGAAAATAAAACGGCAAACACTGATCATAGCCACGACTATATAAAATGGCTAGATTCTCAACCATCTGAATCCGTGTTATACGTTTCATTTGGCAGTTTCAGTTCCGCGTCTAGGGCCCAAATTGACGAAATCATTGAAGCACTGAACAATAGTAAAGTTCGATACCTTTATGTGGCTCGTGGGGAAACATCGAGGTTGAAAGGAAAGTGTGGAGATAAGGGAATGGTGATACCTTGGTGTGATCAACTCAAAGTGTTGTCTCATTCCTCTATAGGTGGATTTTGGAGCCATTGTGGATGGAATTCAACTTTGGACACTCTTTTTTCTGGTGTACCAATTTTGACATTCCCTCTTGCCCACGATCAATTTCCTAATAGTACTAAAATTGCTGATGAATGGAAAAATGGGTGGAAGGTAGAGAAATCATCAAAGTCTGAGAGTGATGTGATTTTTCCAAAAGAATATATAGTAGAGCTTGTTAAGAGGTTTATGGATCTTGAATGCCAAGAGGGAAAGAAAATTAGAGATAGAGCAAGAGAACTTAAGGTTATCTGTCATAAAGCTATTGCTAAAGGCGGATCCTCAGATAGGAACCTCGACGCATTTATCAGTGACATTTCGTCTTGA
Protein sequence

>MS.gene49199.t1

MNISGDAVCHVVAMPFPGRGHINPMLSICKFLISRKPNNILITFVVTEEWLGFIGSDPKPESIRFATIPNVAPPEREKTIGNFHRFYDAAMTKMEAPFEQLLDQLELPVNVIVGDVELRWPVDVGNRRNIPVASLWTMSASFYSMFHHLEVFSRHQHLTHDKLENVPGVSSLHIEDLRTVVRRNNPQNMQLSLECISKVTKANYLLLTTVQELEAEAIDTLKSIFPFPVYPIGPAVPYLDLEENKTANTDHSHDYIKWLDSQPSESVLYVSFGSFSSASRAQIDEIIEALNNSKVRYLYVARGETSRLKGKCGDKGMVIPWCDQLKVLSHSSIGGFWSHCGWNSTLDTLFSGVPILTFPLAHDQFPNSTKIADEWKNGWKVEKSSKSESDVIFPKEYIVELVKRFMDLECQEGKKIRDRARELKVICHKAIAKGGSSDRNLDAFISDISS