Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49339.t1 | XP_013468573.1 | 99.4 | 360 | 2 | 0 | 1 | 360 | 1 | 360 | 2.70E-169 | 604.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49339.t1 | O04336 | 60.2 | 384 | 117 | 11 | 1 | 356 | 1 | 376 | 3.1e-81 | 303.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49339.t1 | A0A072VWY9 | 99.4 | 360 | 2 | 0 | 1 | 360 | 1 | 360 | 1.9e-169 | 604.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene49339.t1 | TF | WRKY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050876 | MS.gene49339 | -0.810051 | 1.40E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene49339 | -0.813143 | 2.97E-51 | -1.69E-46 |
| MS.gene051026 | MS.gene49339 | 0.804809 | 1.81E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene49339 | -0.8089 | 2.47E-50 | -1.69E-46 |
| MS.gene055634 | MS.gene49339 | -0.831501 | 1.61E-55 | -1.69E-46 |
| MS.gene055849 | MS.gene49339 | -0.818247 | 2.17E-52 | -1.69E-46 |
| MS.gene056618 | MS.gene49339 | 0.81974 | 9.91E-53 | -1.69E-46 |
| MS.gene058335 | MS.gene49339 | -0.822246 | 2.62E-53 | -1.69E-46 |
| MS.gene058719 | MS.gene49339 | -0.806152 | 9.45E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene49339 | -0.800083 | 1.70E-48 | -1.69E-46 |
| MS.gene06081 | MS.gene49339 | 0.816953 | 4.24E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49339.t1 | MTR_1g070455 | 98.889 | 360 | 4 | 0 | 1 | 360 | 1 | 360 | 0.0 | 740 |
| MS.gene49339.t1 | MTR_1g009613 | 36.313 | 358 | 162 | 10 | 4 | 350 | 17 | 319 | 3.06e-57 | 189 |
| MS.gene49339.t1 | MTR_4g094908 | 56.044 | 182 | 58 | 4 | 183 | 351 | 152 | 324 | 2.91e-55 | 184 |
| MS.gene49339.t1 | MTR_5g016610 | 74.074 | 108 | 26 | 2 | 245 | 351 | 151 | 257 | 6.74e-53 | 176 |
| MS.gene49339.t1 | MTR_4g127040 | 64.234 | 137 | 38 | 4 | 218 | 351 | 175 | 303 | 1.40e-51 | 174 |
| MS.gene49339.t1 | MTR_3g108960 | 48.466 | 163 | 72 | 5 | 205 | 359 | 222 | 380 | 3.74e-40 | 146 |
| MS.gene49339.t1 | MTR_0117s0040 | 59.494 | 79 | 32 | 0 | 272 | 350 | 53 | 131 | 7.53e-30 | 115 |
| MS.gene49339.t1 | MTR_2g016770 | 55.682 | 88 | 38 | 1 | 268 | 354 | 9 | 96 | 2.35e-27 | 107 |
| MS.gene49339.t1 | MTR_2g016770 | 55.294 | 85 | 37 | 1 | 271 | 354 | 4 | 88 | 3.49e-26 | 104 |
| MS.gene49339.t1 | MTR_2g032030 | 52.475 | 101 | 42 | 3 | 261 | 356 | 230 | 329 | 9.34e-26 | 108 |
| MS.gene49339.t1 | MTR_8g087000 | 52.222 | 90 | 36 | 1 | 269 | 351 | 45 | 134 | 1.03e-25 | 103 |
| MS.gene49339.t1 | MTR_2g032030 | 52.475 | 101 | 42 | 3 | 261 | 356 | 230 | 329 | 1.11e-25 | 107 |
| MS.gene49339.t1 | MTR_2g083870 | 53.191 | 94 | 28 | 2 | 269 | 351 | 50 | 138 | 2.35e-25 | 103 |
| MS.gene49339.t1 | MTR_2g024350 | 61.972 | 71 | 26 | 1 | 290 | 360 | 5 | 74 | 3.27e-25 | 102 |
| MS.gene49339.t1 | MTR_8g087000 | 68.333 | 60 | 19 | 0 | 292 | 351 | 76 | 135 | 5.42e-25 | 102 |
| MS.gene49339.t1 | MTR_7g079040 | 57.831 | 83 | 30 | 1 | 268 | 350 | 134 | 211 | 6.93e-25 | 103 |
| MS.gene49339.t1 | MTR_2g024380 | 54.118 | 85 | 36 | 1 | 268 | 352 | 229 | 310 | 1.49e-24 | 104 |
| MS.gene49339.t1 | MTR_8g028565 | 57.831 | 83 | 30 | 2 | 268 | 350 | 135 | 212 | 5.16e-23 | 98.6 |
| MS.gene49339.t1 | MTR_7g109600 | 50.562 | 89 | 40 | 1 | 266 | 350 | 22 | 110 | 6.59e-23 | 97.1 |
| MS.gene49339.t1 | MTR_1g099600 | 66.102 | 59 | 20 | 0 | 294 | 352 | 186 | 244 | 4.66e-22 | 95.5 |
| MS.gene49339.t1 | MTR_8g098945 | 54.286 | 70 | 28 | 1 | 281 | 350 | 121 | 186 | 3.88e-19 | 86.7 |
| MS.gene49339.t1 | MTR_3g053330 | 51.389 | 72 | 35 | 0 | 289 | 360 | 247 | 318 | 4.32e-19 | 88.6 |
| MS.gene49339.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 267 | 331 | 5.63e-19 | 88.2 |
| MS.gene49339.t1 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 290 | 350 | 249 | 308 | 5.99e-19 | 87.8 |
| MS.gene49339.t1 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 290 | 350 | 227 | 286 | 6.24e-19 | 87.8 |
| MS.gene49339.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 254 | 318 | 6.26e-19 | 87.8 |
| MS.gene49339.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 411 | 475 | 8.34e-19 | 88.2 |
| MS.gene49339.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 398 | 462 | 8.57e-19 | 88.2 |
| MS.gene49339.t1 | MTR_4g082580 | 46.591 | 88 | 45 | 2 | 273 | 360 | 258 | 343 | 9.39e-19 | 87.0 |
| MS.gene49339.t1 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 290 | 350 | 361 | 420 | 9.96e-19 | 87.8 |
| MS.gene49339.t1 | MTR_5g042920 | 34.641 | 153 | 94 | 3 | 208 | 360 | 239 | 385 | 1.28e-18 | 87.0 |
| MS.gene49339.t1 | MTR_5g042920 | 53.968 | 63 | 26 | 3 | 289 | 350 | 146 | 206 | 1.88e-12 | 68.6 |
| MS.gene49339.t1 | MTR_7g110720 | 44.565 | 92 | 43 | 1 | 269 | 360 | 200 | 283 | 1.43e-18 | 87.0 |
| MS.gene49339.t1 | MTR_8g067635 | 48.913 | 92 | 40 | 2 | 268 | 359 | 327 | 411 | 1.50e-18 | 87.4 |
| MS.gene49339.t1 | MTR_7g109800 | 44.578 | 83 | 45 | 1 | 268 | 350 | 120 | 201 | 1.57e-18 | 85.1 |
| MS.gene49339.t1 | MTR_7g110720 | 44.565 | 92 | 43 | 1 | 269 | 360 | 173 | 256 | 1.61e-18 | 86.7 |
| MS.gene49339.t1 | MTR_1g013760 | 47.945 | 73 | 36 | 1 | 279 | 351 | 128 | 198 | 2.18e-18 | 84.7 |
| MS.gene49339.t1 | MTR_4g094412 | 57.895 | 57 | 24 | 0 | 294 | 350 | 235 | 291 | 2.44e-18 | 86.3 |
| MS.gene49339.t1 | MTR_4g094412 | 57.895 | 57 | 24 | 0 | 294 | 350 | 244 | 300 | 2.67e-18 | 86.3 |
| MS.gene49339.t1 | MTR_2g023930 | 47.436 | 78 | 41 | 0 | 277 | 354 | 289 | 366 | 3.32e-18 | 86.3 |
| MS.gene49339.t1 | MTR_7g011820 | 63.158 | 57 | 20 | 1 | 294 | 350 | 411 | 466 | 3.35e-18 | 86.3 |
| MS.gene49339.t1 | MTR_7g011820 | 53.125 | 64 | 27 | 3 | 290 | 352 | 224 | 285 | 4.43e-13 | 70.5 |
| MS.gene49339.t1 | MTR_7g062220 | 49.367 | 79 | 36 | 2 | 276 | 354 | 110 | 184 | 4.63e-18 | 84.3 |
| MS.gene49339.t1 | MTR_3g106060 | 55.172 | 58 | 26 | 0 | 294 | 351 | 139 | 196 | 5.07e-18 | 83.6 |
| MS.gene49339.t1 | MTR_4g007060 | 43.478 | 92 | 48 | 2 | 267 | 354 | 98 | 189 | 5.10e-18 | 83.6 |
| MS.gene49339.t1 | MTR_4g007060 | 43.478 | 92 | 48 | 2 | 267 | 354 | 132 | 223 | 6.94e-18 | 83.6 |
| MS.gene49339.t1 | MTR_4g013260 | 49.351 | 77 | 35 | 2 | 277 | 350 | 317 | 392 | 7.66e-18 | 85.1 |
| MS.gene49339.t1 | MTR_4g013260 | 50.847 | 59 | 28 | 1 | 294 | 352 | 185 | 242 | 4.04e-13 | 70.9 |
| MS.gene49339.t1 | MTR_7g100510 | 57.895 | 57 | 23 | 1 | 294 | 350 | 362 | 417 | 8.90e-18 | 84.7 |
| MS.gene49339.t1 | MTR_7g100510 | 52.055 | 73 | 30 | 4 | 281 | 352 | 178 | 246 | 1.00e-14 | 75.5 |
| MS.gene49339.t1 | MTR_2g088000 | 47.436 | 78 | 41 | 0 | 277 | 354 | 333 | 410 | 8.99e-18 | 85.1 |
| MS.gene49339.t1 | MTR_7g071120 | 33.143 | 175 | 95 | 6 | 196 | 360 | 227 | 389 | 1.69e-17 | 84.0 |
| MS.gene49339.t1 | MTR_7g071120 | 52.542 | 59 | 26 | 2 | 294 | 352 | 167 | 223 | 6.84e-12 | 67.0 |
| MS.gene49339.t1 | MTR_8g069935 | 57.627 | 59 | 25 | 0 | 294 | 352 | 332 | 390 | 1.78e-17 | 84.0 |
| MS.gene49339.t1 | MTR_4g130900 | 57.895 | 57 | 23 | 1 | 294 | 350 | 360 | 415 | 2.24e-17 | 83.6 |
| MS.gene49339.t1 | MTR_4g049790 | 57.895 | 57 | 24 | 0 | 294 | 350 | 313 | 369 | 2.38e-17 | 83.6 |
| MS.gene49339.t1 | MTR_3g104750 | 41.414 | 99 | 56 | 2 | 252 | 350 | 64 | 160 | 3.76e-17 | 78.6 |
| MS.gene49339.t1 | MTR_7g080000 | 48.193 | 83 | 38 | 3 | 276 | 355 | 412 | 492 | 3.99e-17 | 83.2 |
| MS.gene49339.t1 | MTR_7g080000 | 54.237 | 59 | 25 | 2 | 294 | 352 | 235 | 291 | 1.37e-11 | 66.2 |
| MS.gene49339.t1 | MTR_3g031220 | 48.718 | 78 | 39 | 1 | 273 | 350 | 345 | 421 | 4.02e-17 | 82.8 |
| MS.gene49339.t1 | MTR_3g031220 | 54.237 | 59 | 25 | 2 | 294 | 352 | 199 | 255 | 4.46e-13 | 70.5 |
| MS.gene49339.t1 | MTR_5g074400 | 36.508 | 126 | 72 | 2 | 232 | 350 | 352 | 476 | 4.08e-17 | 83.2 |
| MS.gene49339.t1 | MTR_5g074400 | 52.542 | 59 | 26 | 2 | 294 | 352 | 244 | 300 | 1.71e-12 | 68.9 |
| MS.gene49339.t1 | MTR_4g094588 | 54.839 | 62 | 26 | 2 | 294 | 355 | 179 | 238 | 4.98e-17 | 81.6 |
| MS.gene49339.t1 | MTR_7g009730 | 56.140 | 57 | 25 | 0 | 294 | 350 | 220 | 276 | 6.30e-17 | 82.4 |
| MS.gene49339.t1 | MTR_4g132430 | 52.459 | 61 | 29 | 0 | 294 | 354 | 128 | 188 | 7.09e-17 | 81.3 |
| MS.gene49339.t1 | MTR_5g091390 | 52.239 | 67 | 31 | 1 | 294 | 360 | 158 | 223 | 8.02e-17 | 80.5 |
| MS.gene49339.t1 | MTR_3g009470 | 37.500 | 112 | 57 | 3 | 251 | 350 | 441 | 551 | 8.05e-17 | 82.4 |
| MS.gene49339.t1 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 294 | 354 | 281 | 339 | 3.16e-12 | 68.2 |
| MS.gene49339.t1 | MTR_4g107970 | 53.448 | 58 | 27 | 0 | 294 | 351 | 179 | 236 | 1.04e-16 | 81.6 |
| MS.gene49339.t1 | MTR_4g132430 | 52.308 | 65 | 28 | 1 | 294 | 358 | 262 | 323 | 1.07e-16 | 81.6 |
| MS.gene49339.t1 | MTR_2g105060 | 51.667 | 60 | 29 | 0 | 291 | 350 | 167 | 226 | 1.17e-16 | 80.1 |
| MS.gene49339.t1 | MTR_2g105060 | 52.632 | 57 | 27 | 0 | 294 | 350 | 95 | 151 | 1.19e-16 | 79.0 |
| MS.gene49339.t1 | MTR_1g015140 | 38.384 | 99 | 58 | 2 | 252 | 350 | 63 | 158 | 1.53e-16 | 76.6 |
| MS.gene49339.t1 | MTR_4g107970 | 53.448 | 58 | 27 | 0 | 294 | 351 | 256 | 313 | 1.54e-16 | 81.3 |
| MS.gene49339.t1 | MTR_8g067650 | 47.170 | 106 | 45 | 3 | 261 | 359 | 300 | 401 | 1.66e-16 | 80.9 |
| MS.gene49339.t1 | MTR_2g045360 | 52.459 | 61 | 29 | 0 | 294 | 354 | 212 | 272 | 1.89e-16 | 80.5 |
| MS.gene49339.t1 | MTR_7g080020 | 48.780 | 82 | 37 | 3 | 277 | 355 | 474 | 553 | 1.99e-16 | 81.3 |
| MS.gene49339.t1 | MTR_7g080020 | 52.542 | 59 | 26 | 2 | 294 | 352 | 281 | 337 | 5.13e-11 | 64.7 |
| MS.gene49339.t1 | MTR_6g053200 | 43.678 | 87 | 46 | 1 | 266 | 352 | 306 | 389 | 8.31e-16 | 79.0 |
| MS.gene49339.t1 | MTR_1g013790 | 46.970 | 66 | 34 | 1 | 291 | 356 | 99 | 163 | 8.70e-16 | 76.6 |
| MS.gene49339.t1 | MTR_8g007270 | 39.583 | 96 | 52 | 3 | 268 | 360 | 126 | 218 | 9.00e-16 | 76.3 |
| MS.gene49339.t1 | MTR_5g097490 | 56.897 | 58 | 24 | 1 | 294 | 351 | 253 | 309 | 1.03e-15 | 78.2 |
| MS.gene49339.t1 | MTR_1g077780 | 43.182 | 88 | 48 | 2 | 273 | 360 | 42 | 127 | 1.07e-15 | 73.9 |
| MS.gene49339.t1 | MTR_5g043880 | 41.860 | 86 | 49 | 1 | 268 | 353 | 99 | 183 | 2.69e-15 | 75.5 |
| MS.gene49339.t1 | MTR_8g092010 | 52.459 | 61 | 28 | 1 | 290 | 350 | 105 | 164 | 2.78e-15 | 73.6 |
| MS.gene49339.t1 | MTR_7g079010 | 43.750 | 80 | 41 | 2 | 274 | 350 | 119 | 197 | 3.13e-15 | 74.3 |
| MS.gene49339.t1 | MTR_8g092140 | 47.619 | 63 | 32 | 1 | 289 | 351 | 156 | 217 | 3.47e-15 | 74.7 |
| MS.gene49339.t1 | MTR_1g086790 | 39.759 | 83 | 49 | 1 | 268 | 350 | 133 | 214 | 3.87e-15 | 75.9 |
| MS.gene49339.t1 | MTR_5g067680 | 38.462 | 117 | 64 | 4 | 250 | 359 | 155 | 270 | 5.09e-15 | 75.9 |
| MS.gene49339.t1 | MTR_3g095080 | 47.619 | 63 | 32 | 1 | 289 | 351 | 140 | 201 | 8.51e-15 | 73.2 |
| MS.gene49339.t1 | MTR_3g090860 | 54.386 | 57 | 24 | 1 | 294 | 348 | 134 | 190 | 8.52e-15 | 75.1 |
| MS.gene49339.t1 | MTR_4g049760 | 56.604 | 53 | 23 | 0 | 298 | 350 | 295 | 347 | 1.06e-14 | 75.5 |
| MS.gene49339.t1 | MTR_3g095080 | 47.619 | 63 | 32 | 1 | 289 | 351 | 164 | 225 | 1.09e-14 | 73.2 |
| MS.gene49339.t1 | MTR_3g095040 | 42.500 | 80 | 45 | 1 | 271 | 350 | 96 | 174 | 5.57e-14 | 70.5 |
| MS.gene49339.t1 | MTR_2g033820 | 50.877 | 57 | 27 | 1 | 294 | 350 | 204 | 259 | 7.36e-14 | 72.4 |
| MS.gene49339.t1 | MTR_7g117200 | 52.632 | 57 | 25 | 1 | 294 | 348 | 119 | 175 | 2.24e-13 | 70.5 |
| MS.gene49339.t1 | MTR_1g078260 | 53.846 | 65 | 28 | 2 | 290 | 353 | 244 | 307 | 2.42e-13 | 71.2 |
| MS.gene49339.t1 | MTR_3g031220 | 54.237 | 59 | 25 | 2 | 294 | 352 | 199 | 255 | 2.53e-13 | 70.9 |
| MS.gene49339.t1 | MTR_4g122530 | 47.368 | 57 | 29 | 1 | 294 | 350 | 209 | 264 | 4.01e-13 | 70.5 |
| MS.gene49339.t1 | MTR_7g028415 | 45.161 | 62 | 33 | 1 | 289 | 350 | 89 | 149 | 1.01e-12 | 66.2 |
| MS.gene49339.t1 | MTR_7g028710 | 45.161 | 62 | 33 | 1 | 289 | 350 | 89 | 149 | 1.01e-12 | 66.2 |
| MS.gene49339.t1 | MTR_8g027860 | 41.860 | 86 | 47 | 2 | 266 | 348 | 108 | 193 | 1.14e-12 | 68.6 |
| MS.gene49339.t1 | MTR_8g099350 | 41.667 | 84 | 46 | 2 | 268 | 348 | 106 | 189 | 2.18e-12 | 67.8 |
| MS.gene49339.t1 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 294 | 354 | 281 | 339 | 2.25e-12 | 68.6 |
| MS.gene49339.t1 | MTR_5g018380 | 51.724 | 58 | 25 | 2 | 293 | 350 | 123 | 177 | 2.70e-12 | 65.1 |
| MS.gene49339.t1 | MTR_6g086555 | 30.968 | 155 | 91 | 5 | 198 | 351 | 125 | 264 | 3.47e-12 | 67.4 |
| MS.gene49339.t1 | MTR_8g087000 | 64.103 | 39 | 14 | 0 | 313 | 351 | 35 | 73 | 4.08e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49339.t1 | AT2G30590 | 55.844 | 385 | 132 | 14 | 1 | 356 | 1 | 376 | 1.04e-115 | 341 |
| MS.gene49339.t1 | AT3G04670 | 50.959 | 365 | 124 | 13 | 1 | 353 | 1 | 322 | 3.54e-104 | 310 |
| MS.gene49339.t1 | AT5G28650 | 47.790 | 362 | 140 | 9 | 1 | 353 | 1 | 322 | 1.26e-99 | 298 |
| MS.gene49339.t1 | AT3G04670 | 47.416 | 329 | 118 | 13 | 1 | 317 | 1 | 286 | 1.81e-75 | 235 |
| MS.gene49339.t1 | AT4G31550 | 51.087 | 184 | 60 | 6 | 180 | 350 | 137 | 303 | 1.25e-53 | 180 |
| MS.gene49339.t1 | AT4G31550 | 51.630 | 184 | 58 | 7 | 180 | 350 | 137 | 302 | 1.02e-52 | 177 |
| MS.gene49339.t1 | AT2G24570 | 56.376 | 149 | 51 | 3 | 214 | 350 | 154 | 300 | 1.20e-52 | 177 |
| MS.gene49339.t1 | AT4G24240 | 54.545 | 176 | 55 | 6 | 187 | 353 | 182 | 341 | 1.43e-52 | 178 |
| MS.gene49339.t1 | AT2G23320 | 70.000 | 110 | 29 | 2 | 245 | 351 | 190 | 298 | 1.41e-50 | 172 |
| MS.gene49339.t1 | AT1G29280 | 55.435 | 92 | 34 | 3 | 266 | 350 | 40 | 131 | 3.12e-27 | 108 |
| MS.gene49339.t1 | AT4G31550 | 44.218 | 147 | 51 | 7 | 180 | 313 | 137 | 265 | 4.64e-26 | 105 |
| MS.gene49339.t1 | AT3G58710 | 50.980 | 102 | 33 | 3 | 269 | 359 | 40 | 135 | 1.90e-25 | 103 |
| MS.gene49339.t1 | AT4G24240 | 47.059 | 136 | 47 | 6 | 187 | 313 | 182 | 301 | 2.86e-25 | 104 |
| MS.gene49339.t1 | AT2G34830 | 49.524 | 105 | 47 | 2 | 257 | 356 | 174 | 277 | 3.02e-25 | 106 |
| MS.gene49339.t1 | AT2G34830 | 49.524 | 105 | 47 | 2 | 257 | 356 | 183 | 286 | 3.70e-25 | 105 |
| MS.gene49339.t1 | AT2G23320 | 66.667 | 72 | 20 | 2 | 245 | 313 | 190 | 260 | 8.75e-25 | 102 |
| MS.gene49339.t1 | AT3G58710 | 50.000 | 102 | 34 | 3 | 269 | 359 | 41 | 136 | 9.62e-25 | 102 |
| MS.gene49339.t1 | AT4G01250 | 45.600 | 125 | 62 | 2 | 227 | 350 | 66 | 185 | 4.77e-24 | 100 |
| MS.gene49339.t1 | AT1G30650 | 52.874 | 87 | 36 | 1 | 269 | 350 | 188 | 274 | 1.06e-23 | 101 |
| MS.gene49339.t1 | AT5G52830 | 52.941 | 85 | 36 | 1 | 268 | 352 | 144 | 224 | 8.67e-22 | 95.5 |
| MS.gene49339.t1 | AT5G26170 | 52.308 | 65 | 30 | 1 | 289 | 353 | 109 | 172 | 1.20e-19 | 85.5 |
| MS.gene49339.t1 | AT4G23550 | 60.317 | 63 | 24 | 1 | 294 | 356 | 141 | 202 | 1.56e-19 | 88.2 |
| MS.gene49339.t1 | AT4G18170 | 38.017 | 121 | 67 | 3 | 235 | 355 | 120 | 232 | 3.17e-19 | 87.4 |
| MS.gene49339.t1 | AT2G04880 | 58.209 | 67 | 27 | 1 | 288 | 354 | 278 | 343 | 3.51e-19 | 89.0 |
| MS.gene49339.t1 | AT2G04880 | 58.209 | 67 | 27 | 1 | 288 | 354 | 302 | 367 | 3.63e-19 | 89.0 |
| MS.gene49339.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.14e-18 | 84.0 |
| MS.gene49339.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.35e-12 | 66.6 |
| MS.gene49339.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.14e-18 | 84.0 |
| MS.gene49339.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.35e-12 | 66.6 |
| MS.gene49339.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.14e-18 | 84.0 |
| MS.gene49339.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.35e-12 | 66.6 |
| MS.gene49339.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.14e-18 | 84.0 |
| MS.gene49339.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.35e-12 | 66.6 |
| MS.gene49339.t1 | AT1G13960 | 44.211 | 95 | 39 | 2 | 269 | 350 | 219 | 312 | 2.62e-18 | 85.5 |
| MS.gene49339.t1 | AT1G13960 | 56.452 | 62 | 24 | 3 | 290 | 350 | 72 | 131 | 2.29e-14 | 73.9 |
| MS.gene49339.t1 | AT2G38470 | 59.016 | 61 | 24 | 1 | 290 | 350 | 359 | 418 | 2.68e-18 | 86.7 |
| MS.gene49339.t1 | AT2G38470 | 54.237 | 59 | 25 | 2 | 294 | 352 | 185 | 241 | 3.40e-13 | 70.9 |
| MS.gene49339.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.49e-18 | 85.5 |
| MS.gene49339.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.49e-18 | 85.5 |
| MS.gene49339.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.49e-18 | 85.5 |
| MS.gene49339.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.49e-18 | 85.5 |
| MS.gene49339.t1 | AT4G04450 | 47.561 | 82 | 40 | 1 | 277 | 358 | 182 | 260 | 3.57e-18 | 85.9 |
| MS.gene49339.t1 | AT4G04450 | 47.561 | 82 | 40 | 1 | 277 | 358 | 276 | 354 | 4.53e-18 | 85.9 |
| MS.gene49339.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 212 | 294 | 4.63e-18 | 84.0 |
| MS.gene49339.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 112 | 175 | 3.07e-12 | 67.0 |
| MS.gene49339.t1 | AT1G13960 | 44.211 | 95 | 39 | 2 | 269 | 350 | 372 | 465 | 5.09e-18 | 85.5 |
| MS.gene49339.t1 | AT1G13960 | 48.101 | 79 | 32 | 4 | 272 | 350 | 215 | 284 | 3.66e-14 | 73.9 |
| MS.gene49339.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 305 | 369 | 5.84e-18 | 85.5 |
| MS.gene49339.t1 | AT1G68150 | 57.895 | 57 | 24 | 0 | 294 | 350 | 236 | 292 | 6.12e-18 | 84.7 |
| MS.gene49339.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 377 | 441 | 6.65e-18 | 85.5 |
| MS.gene49339.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 337 | 401 | 6.82e-18 | 85.1 |
| MS.gene49339.t1 | AT5G45050 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1131 | 1209 | 8.46e-18 | 85.5 |
| MS.gene49339.t1 | AT5G45050 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1159 | 1237 | 9.48e-18 | 85.5 |
| MS.gene49339.t1 | AT5G45050 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1020 | 1098 | 1.08e-17 | 85.1 |
| MS.gene49339.t1 | AT1G62300 | 44.186 | 86 | 40 | 1 | 269 | 354 | 296 | 373 | 1.75e-17 | 84.0 |
| MS.gene49339.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.55e-17 | 83.6 |
| MS.gene49339.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.55e-17 | 83.6 |
| MS.gene49339.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.55e-17 | 83.6 |
| MS.gene49339.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.55e-17 | 83.6 |
| MS.gene49339.t1 | AT1G29860 | 44.595 | 74 | 40 | 1 | 277 | 350 | 120 | 192 | 2.86e-17 | 81.3 |
| MS.gene49339.t1 | AT2G03340 | 46.154 | 78 | 41 | 1 | 273 | 350 | 395 | 471 | 2.98e-17 | 83.2 |
| MS.gene49339.t1 | AT2G03340 | 55.556 | 63 | 25 | 3 | 289 | 350 | 245 | 305 | 9.57e-14 | 72.8 |
| MS.gene49339.t1 | AT5G49520 | 56.140 | 57 | 24 | 1 | 294 | 350 | 222 | 277 | 3.34e-17 | 82.8 |
| MS.gene49339.t1 | AT4G01720 | 55.738 | 61 | 27 | 0 | 294 | 354 | 240 | 300 | 3.74e-17 | 82.8 |
| MS.gene49339.t1 | AT4G30935 | 56.140 | 57 | 24 | 1 | 294 | 350 | 332 | 387 | 4.17e-17 | 82.8 |
| MS.gene49339.t1 | AT5G15130 | 55.172 | 58 | 26 | 0 | 294 | 351 | 186 | 243 | 5.95e-17 | 82.4 |
| MS.gene49339.t1 | AT5G15130 | 55.172 | 58 | 26 | 0 | 294 | 351 | 228 | 285 | 6.44e-17 | 82.4 |
| MS.gene49339.t1 | AT4G31800 | 41.096 | 73 | 43 | 0 | 278 | 350 | 96 | 168 | 1.53e-16 | 78.6 |
| MS.gene49339.t1 | AT5G56270 | 49.351 | 77 | 35 | 2 | 277 | 350 | 468 | 543 | 1.71e-16 | 81.3 |
| MS.gene49339.t1 | AT5G56270 | 50.820 | 61 | 28 | 2 | 294 | 354 | 274 | 332 | 4.98e-11 | 64.7 |
| MS.gene49339.t1 | AT3G01080 | 47.436 | 78 | 40 | 1 | 273 | 350 | 286 | 362 | 2.06e-16 | 80.5 |
| MS.gene49339.t1 | AT3G01080 | 51.562 | 64 | 28 | 3 | 290 | 352 | 163 | 224 | 6.86e-13 | 69.7 |
| MS.gene49339.t1 | AT2G37260 | 43.137 | 102 | 52 | 2 | 249 | 350 | 230 | 325 | 2.14e-16 | 79.7 |
| MS.gene49339.t1 | AT2G37260 | 54.237 | 59 | 25 | 2 | 294 | 352 | 86 | 142 | 1.03e-12 | 68.9 |
| MS.gene49339.t1 | AT3G01080 | 47.436 | 78 | 40 | 1 | 273 | 350 | 324 | 400 | 2.32e-16 | 80.5 |
| MS.gene49339.t1 | AT3G01080 | 51.562 | 64 | 28 | 3 | 290 | 352 | 201 | 262 | 7.16e-13 | 69.7 |
| MS.gene49339.t1 | AT4G31800 | 41.096 | 73 | 43 | 0 | 278 | 350 | 161 | 233 | 2.41e-16 | 79.3 |
| MS.gene49339.t1 | AT2G40740 | 40.426 | 94 | 53 | 2 | 259 | 349 | 138 | 231 | 2.44e-16 | 79.0 |
| MS.gene49339.t1 | AT2G37260 | 43.137 | 102 | 52 | 2 | 249 | 350 | 228 | 323 | 2.55e-16 | 79.7 |
| MS.gene49339.t1 | AT2G37260 | 54.237 | 59 | 25 | 2 | 294 | 352 | 84 | 140 | 1.16e-12 | 68.6 |
| MS.gene49339.t1 | AT2G40740 | 40.860 | 93 | 52 | 2 | 259 | 348 | 147 | 239 | 3.38e-16 | 78.6 |
| MS.gene49339.t1 | AT4G39410 | 41.860 | 86 | 46 | 2 | 269 | 351 | 196 | 280 | 3.40e-16 | 78.6 |
| MS.gene49339.t1 | AT2G37260 | 43.137 | 102 | 52 | 2 | 249 | 350 | 310 | 405 | 3.48e-16 | 79.7 |
| MS.gene49339.t1 | AT2G37260 | 54.237 | 59 | 25 | 2 | 294 | 352 | 166 | 222 | 1.18e-12 | 68.9 |
| MS.gene49339.t1 | AT5G45260 | 46.237 | 93 | 38 | 4 | 269 | 356 | 1187 | 1272 | 4.42e-16 | 80.5 |
| MS.gene49339.t1 | AT5G43290 | 49.367 | 79 | 36 | 2 | 276 | 354 | 100 | 174 | 4.70e-16 | 77.8 |
| MS.gene49339.t1 | AT2G47260 | 40.964 | 83 | 48 | 1 | 268 | 350 | 149 | 230 | 8.71e-16 | 77.8 |
| MS.gene49339.t1 | AT5G46350 | 51.613 | 62 | 28 | 2 | 294 | 355 | 184 | 243 | 1.12e-15 | 77.4 |
| MS.gene49339.t1 | AT1G69310 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.23e-15 | 76.6 |
| MS.gene49339.t1 | AT1G69310 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.23e-15 | 76.6 |
| MS.gene49339.t1 | AT1G69310 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.23e-15 | 76.6 |
| MS.gene49339.t1 | AT4G26440 | 46.914 | 81 | 41 | 2 | 274 | 354 | 353 | 431 | 1.29e-15 | 78.6 |
| MS.gene49339.t1 | AT4G26440 | 51.562 | 64 | 28 | 3 | 292 | 354 | 176 | 237 | 1.98e-11 | 65.9 |
| MS.gene49339.t1 | AT2G44745 | 38.298 | 94 | 52 | 3 | 270 | 360 | 119 | 209 | 1.48e-15 | 75.5 |
| MS.gene49339.t1 | AT3G62340 | 43.902 | 82 | 45 | 1 | 271 | 352 | 96 | 176 | 1.72e-15 | 76.3 |
| MS.gene49339.t1 | AT1G80840 | 36.975 | 119 | 62 | 4 | 245 | 350 | 85 | 203 | 1.96e-15 | 76.6 |
| MS.gene49339.t1 | AT1G55600 | 50.725 | 69 | 30 | 2 | 290 | 358 | 304 | 368 | 2.15e-15 | 77.8 |
| MS.gene49339.t1 | AT1G18860 | 54.386 | 57 | 26 | 0 | 294 | 350 | 240 | 296 | 2.22e-15 | 77.8 |
| MS.gene49339.t1 | AT1G69810 | 46.988 | 83 | 35 | 2 | 269 | 350 | 187 | 261 | 4.87e-15 | 76.3 |
| MS.gene49339.t1 | AT1G69810 | 46.988 | 83 | 35 | 2 | 269 | 350 | 129 | 203 | 5.16e-15 | 75.5 |
| MS.gene49339.t1 | AT2G21900 | 56.140 | 57 | 24 | 1 | 294 | 350 | 110 | 165 | 6.30e-15 | 73.2 |
| MS.gene49339.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 104 | 160 | 6.64e-15 | 73.6 |
| MS.gene49339.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 104 | 160 | 6.64e-15 | 73.6 |
| MS.gene49339.t1 | AT5G41570 | 43.529 | 85 | 44 | 2 | 269 | 350 | 71 | 154 | 7.83e-15 | 72.4 |
| MS.gene49339.t1 | AT5G64810 | 49.180 | 61 | 30 | 1 | 290 | 350 | 107 | 166 | 1.27e-14 | 72.0 |
| MS.gene49339.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 126 | 182 | 1.30e-14 | 73.2 |
| MS.gene49339.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 147 | 203 | 1.58e-14 | 73.6 |
| MS.gene49339.t1 | AT1G64000 | 38.095 | 84 | 51 | 1 | 267 | 350 | 88 | 170 | 2.56e-14 | 71.2 |
| MS.gene49339.t1 | AT2G46130 | 50.000 | 62 | 30 | 1 | 289 | 350 | 26 | 86 | 2.59e-14 | 68.9 |
| MS.gene49339.t1 | AT2G30250 | 42.857 | 84 | 43 | 4 | 275 | 355 | 307 | 388 | 4.15e-14 | 73.6 |
| MS.gene49339.t1 | AT3G01970 | 47.619 | 63 | 32 | 1 | 289 | 351 | 61 | 122 | 1.16e-13 | 68.2 |
| MS.gene49339.t1 | AT3G01080 | 51.562 | 64 | 28 | 3 | 290 | 352 | 201 | 262 | 5.16e-13 | 69.7 |
| MS.gene49339.t1 | AT5G13080 | 45.161 | 62 | 33 | 1 | 289 | 350 | 63 | 123 | 9.02e-13 | 65.5 |
| MS.gene49339.t1 | AT4G11070 | 36.975 | 119 | 63 | 3 | 233 | 348 | 89 | 198 | 2.33e-12 | 67.4 |
| MS.gene49339.t1 | AT4G11070 | 36.975 | 119 | 63 | 3 | 233 | 348 | 57 | 166 | 2.55e-12 | 67.0 |
| MS.gene49339.t1 | AT4G23810 | 45.882 | 85 | 43 | 2 | 268 | 349 | 132 | 216 | 5.85e-12 | 66.2 |
| MS.gene49339.t1 | AT1G69310 | 38.824 | 85 | 47 | 2 | 269 | 353 | 123 | 202 | 1.97e-11 | 64.3 |
| MS.gene49339.t1 | AT1G66560 | 47.458 | 59 | 29 | 1 | 292 | 348 | 102 | 160 | 9.22e-11 | 62.0 |
Find 79 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAGAAAGTGGATTTCTT+AGG | 0.196128 | 1.1:+52970264 | None:intergenic |
| CATGCAGTTCATGCATTTGC+AGG | 0.256684 | 1.1:+52968912 | None:intergenic |
| TTCTCTTGGAAACCCTTCTT+TGG | 0.278708 | 1.1:-52970249 | MS.gene49339:CDS |
| AAAGTTGTGTCTTTGCTTCA+TGG | 0.278912 | 1.1:-52970461 | MS.gene49339:CDS |
| TAGTAGCCTTGTCAAAATTA+AGG | 0.303036 | 1.1:+52970024 | None:intergenic |
| TAGAGTGAAGAGATCAATTA+AGG | 0.339973 | 1.1:-52969680 | MS.gene49339:CDS |
| CAAAATTCAGTTCAGGAACT+TGG | 0.342737 | 1.1:-52970293 | MS.gene49339:CDS |
| GGAAGTTCCTTCCATTTGAT+TGG | 0.353546 | 1.1:-52969924 | MS.gene49339:CDS |
| TGTGTCTTTGCTTCATGGTT+TGG | 0.359375 | 1.1:-52970456 | MS.gene49339:CDS |
| GTTTGGATCATTCAAGAGTT+AGG | 0.362142 | 1.1:-52970439 | MS.gene49339:CDS |
| AAGAAAGCAGTTTGAGGATA+AGG | 0.371998 | 1.1:+52970392 | None:intergenic |
| CTAAGAAATCCACTTTCTCT+TGG | 0.374963 | 1.1:-52970263 | MS.gene49339:CDS |
| AGGAATTTAACTGTTGAAAC+TGG | 0.385192 | 1.1:-52970506 | MS.gene49339:CDS |
| GTGATTATGCTCGCCTTCAT+AGG | 0.392014 | 1.1:+52968953 | None:intergenic |
| TAAGTATGTTGTCTCAATCA+TGG | 0.418754 | 1.1:-52970544 | MS.gene49339:CDS |
| CATGGGATCAAGTTCATCAT+AGG | 0.429367 | 1.1:-52970526 | MS.gene49339:CDS |
| TTATGCCGCTGGTGTTCCTT+CGG | 0.429874 | 1.1:+52970048 | None:intergenic |
| TTTGAACTCAATTCCAAAGA+AGG | 0.431276 | 1.1:+52970236 | None:intergenic |
| CTATCCTCAAAATTCAGTTC+AGG | 0.434300 | 1.1:-52970300 | MS.gene49339:CDS |
| CACCAACAATGTCGTCTACT+AGG | 0.435790 | 1.1:-52969995 | MS.gene49339:CDS |
| CTTTGGAATTGAGTTCAAAC+GGG | 0.435936 | 1.1:-52970232 | MS.gene49339:CDS |
| AAGAGAAAGTGGATTTCTTA+GGG | 0.437226 | 1.1:+52970265 | None:intergenic |
| CTCTCAACATGCTTCCTAGC+AGG | 0.437995 | 1.1:+52969008 | None:intergenic |
| TAGGTAACCATTAGCATAGT+AGG | 0.453570 | 1.1:+52968972 | None:intergenic |
| GGGTGAGGAGAGCCCTTGAT+AGG | 0.454162 | 1.1:+52969586 | None:intergenic |
| TGCAGGTTGTGTTGGTACCT+TGG | 0.458215 | 1.1:+52968929 | None:intergenic |
| AGAAAGCAGTTTGAGGATAA+GGG | 0.460093 | 1.1:+52970393 | None:intergenic |
| AGATCGGAGCTCCAATCAAA+TGG | 0.468483 | 1.1:+52969913 | None:intergenic |
| ATGCTAATGGTTACCTATGA+AGG | 0.471493 | 1.1:-52968966 | MS.gene49339:CDS |
| TTCCTCCATGAGTAATCATC+AGG | 0.472648 | 1.1:+52969622 | None:intergenic |
| GCATGAGAGGCTGCCCTGCT+AGG | 0.472837 | 1.1:-52969022 | MS.gene49339:CDS |
| TCTTTGGAATTGAGTTCAAA+CGG | 0.478409 | 1.1:-52970233 | MS.gene49339:CDS |
| GGATGAGCCTACTATGCTAA+TGG | 0.481224 | 1.1:-52968979 | MS.gene49339:CDS |
| TTTGTTGCTGCAGCTGCTGT+TGG | 0.487273 | 1.1:+52970132 | None:intergenic |
| AAAATTAAGGCTTATGCCGC+TGG | 0.488025 | 1.1:+52970037 | None:intergenic |
| GAAGGGTTTCCAAGAGAAAG+TGG | 0.494949 | 1.1:+52970254 | None:intergenic |
| GCAAGCTTGTTGCTGATAGC+AGG | 0.495556 | 1.1:+52969655 | None:intergenic |
| GATTACTCATGGAGGAAGTA+CGG | 0.498681 | 1.1:-52969616 | MS.gene49339:CDS |
| TTGAACTCAATTCCAAAGAA+GGG | 0.509941 | 1.1:+52970237 | None:intergenic |
| GTACGGGCAGAAGCCTATCA+AGG | 0.510514 | 1.1:-52969599 | MS.gene49339:CDS |
| CATGCATTTGCAGGTTGTGT+TGG | 0.511678 | 1.1:+52968921 | None:intergenic |
| GACCTAGTAGACGACATTGT+TGG | 0.517470 | 1.1:+52969993 | None:intergenic |
| AAACTGGTGAAGCTGTGAAT+AGG | 0.523498 | 1.1:-52970490 | MS.gene49339:CDS |
| ATTACCTCTTCTTTGAGCAA+TGG | 0.528866 | 1.1:+52969805 | None:intergenic |
| TTGTCTAAGAAAGCAGTTTG+AGG | 0.538734 | 1.1:+52970386 | None:intergenic |
| TCCCTCCTGATGATTACTCA+TGG | 0.545497 | 1.1:-52969627 | MS.gene49339:CDS |
| AAGTATGTTGTCTCAATCAT+GGG | 0.546722 | 1.1:-52970543 | MS.gene49339:CDS |
| GGAAGCGTGGCTAACGTGGA+TGG | 0.552072 | 1.1:-52969945 | MS.gene49339:CDS |
| AATGCCATTGCTCAAAGAAG+AGG | 0.554797 | 1.1:-52969809 | MS.gene49339:intron |
| ATTTCCTCCTTGAGCATAGA+CGG | 0.557646 | 1.1:-52969966 | MS.gene49339:CDS |
| ATTACTCATGGAGGAAGTAC+GGG | 0.557772 | 1.1:-52969615 | MS.gene49339:CDS |
| GAATTCTGATCTGAAGAGAT+CGG | 0.560341 | 1.1:+52969897 | None:intergenic |
| CACGCTTCCGTCTATGCTCA+AGG | 0.561562 | 1.1:+52969959 | None:intergenic |
| AGACGGAAGCGTGGCTAACG+TGG | 0.565434 | 1.1:-52969949 | MS.gene49339:CDS |
| TCTCAACATGCTTCCTAGCA+GGG | 0.575418 | 1.1:+52969009 | None:intergenic |
| TCAAGGGCTCTCCTCACCCT+AGG | 0.577561 | 1.1:-52969582 | MS.gene49339:intron |
| ATGTTCTGCTAGAGGTGATG+AGG | 0.577879 | 1.1:-52969859 | MS.gene49339:CDS |
| TATAAGTGCAGCAGCATGAG+AGG | 0.580000 | 1.1:-52969035 | MS.gene49339:CDS |
| ATCAGAATTCACAGCACAAG+AGG | 0.581042 | 1.1:-52969884 | MS.gene49339:CDS |
| TGCTATCAGCAACAAGCTTG+CGG | 0.581834 | 1.1:-52969653 | MS.gene49339:CDS |
| CGGAGCTCCAATCAAATGGA+AGG | 0.586112 | 1.1:+52969917 | None:intergenic |
| GAAGCATGTTGAGAGGTGCT+TGG | 0.586233 | 1.1:-52969000 | MS.gene49339:CDS |
| GCTTGTTGAGCAAGGTGAAG+CGG | 0.587298 | 1.1:+52970203 | None:intergenic |
| CTCCATGAGTAATCATCAGG+AGG | 0.604331 | 1.1:+52969625 | None:intergenic |
| AACAGCAGCTGCAGCAACAA+AGG | 0.622186 | 1.1:-52970130 | MS.gene49339:CDS |
| TGTTCTGCTAGAGGTGATGA+GGG | 0.623984 | 1.1:-52969858 | MS.gene49339:CDS |
| AAGCTGAAATGATGTTCCGA+AGG | 0.624862 | 1.1:-52970064 | MS.gene49339:CDS |
| AAGAGGAAATGTTCTGCTAG+AGG | 0.625674 | 1.1:-52969867 | MS.gene49339:CDS |
| TTGATGCAGCTTGTTGAGCA+AGG | 0.628338 | 1.1:+52970195 | None:intergenic |
| TCCATGAGTAATCATCAGGA+GGG | 0.631195 | 1.1:+52969626 | None:intergenic |
| GGTTGGACATACCTAGGGTG+AGG | 0.641458 | 1.1:+52969571 | None:intergenic |
| TACGGGCAGAAGCCTATCAA+GGG | 0.654538 | 1.1:-52969598 | MS.gene49339:CDS |
| CTTGAGCATAGACGGAAGCG+TGG | 0.674043 | 1.1:-52969958 | MS.gene49339:CDS |
| AGGCGAGCATAATCACGCCA+AGG | 0.679418 | 1.1:-52968946 | MS.gene49339:CDS |
| CTCCTGATGATTACTCATGG+AGG | 0.692245 | 1.1:-52969624 | MS.gene49339:CDS |
| TGGTGATGATGCTGTTGCTG+CGG | 0.703851 | 1.1:+52970152 | None:intergenic |
| CTGCTAGGAAGCATGTTGAG+AGG | 0.707257 | 1.1:-52969007 | MS.gene49339:CDS |
| ATGTTCCGAAGGAACACCAG+CGG | 0.729358 | 1.1:-52970053 | MS.gene49339:CDS |
| GCTTCCGTCTATGCTCAAGG+AGG | 0.768540 | 1.1:+52969962 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATATCATATTACAA+TGG | + | chr1.1:52969794-52969813 | None:intergenic | 10.0% |
| !!! | ATGTTTTCAAGTTAAAAAAA+AGG | + | chr1.1:52970295-52970314 | None:intergenic | 15.0% |
| !!! | TGTTTTCAAGTTAAAAAAAA+GGG | + | chr1.1:52970294-52970313 | None:intergenic | 15.0% |
| !! | AATTAAATCTCATAGCAAAA+CGG | + | chr1.1:52969972-52969991 | None:intergenic | 20.0% |
| !! | TGTAATGAAAATTACAAACA+TGG | + | chr1.1:52970238-52970257 | None:intergenic | 20.0% |
| !!! | AATTTTATTGATTCGATTCA+AGG | - | chr1.1:52969988-52970007 | MS.gene49339:CDS | 20.0% |
| !!! | GTTAATTTCTGTTACTTTAA+AGG | - | chr1.1:52969759-52969778 | MS.gene49339:intron | 20.0% |
| ! | AAAATTACAAACATGGACAA+AGG | + | chr1.1:52970231-52970250 | None:intergenic | 25.0% |
| ! | AAAATTATTTAAATCCCCAC+AGG | + | chr1.1:52970158-52970177 | None:intergenic | 25.0% |
| ! | CATTATTGTCAATCAAATGA+AGG | - | chr1.1:52970379-52970398 | MS.gene49339:CDS | 25.0% |
| ! | TGACAATAATGTGCAAATAA+TGG | + | chr1.1:52970370-52970389 | None:intergenic | 25.0% |
| ! | TGGATATGTAATATGTTGAT+TGG | - | chr1.1:52970188-52970207 | MS.gene49339:CDS | 25.0% |
| !! | ATGATGTTTCTTTTGCAATT+TGG | + | chr1.1:52969160-52969179 | None:intergenic | 25.0% |
| !! | TCTAATGGTTGATACATTAA+TGG | - | chr1.1:52969737-52969756 | MS.gene49339:intron | 25.0% |
| !! | TGATGTTTCTTTTGCAATTT+GGG | + | chr1.1:52969159-52969178 | None:intergenic | 25.0% |
| !! | TGTGGGGATTTAAATAATTT+TGG | - | chr1.1:52970157-52970176 | MS.gene49339:CDS | 25.0% |
| !! | TTGAGTAAAGTGAACATTTT+TGG | + | chr1.1:52969194-52969213 | None:intergenic | 25.0% |
| !!! | AAATAATTTTGGTCTATGTG+TGG | - | chr1.1:52970168-52970187 | MS.gene49339:CDS | 25.0% |
| !!! | TTTTGAAATTTTGATGCTCT+AGG | - | chr1.1:52970329-52970348 | MS.gene49339:CDS | 25.0% |
| AAGTATGTTGTCTCAATCAT+GGG | - | chr1.1:52968976-52968995 | MS.gene49339:CDS | 30.0% | |
| AGGAATTTAACTGTTGAAAC+TGG | - | chr1.1:52969013-52969032 | MS.gene49339:CDS | 30.0% | |
| CAAAGAAGAGGTAATTCTAA+TGG | - | chr1.1:52969722-52969741 | MS.gene49339:intron | 30.0% | |
| TAAGTATGTTGTCTCAATCA+TGG | - | chr1.1:52968975-52968994 | MS.gene49339:CDS | 30.0% | |
| TAGAGTGAAGAGATCAATTA+AGG | - | chr1.1:52969839-52969858 | MS.gene49339:CDS | 30.0% | |
| TTGAACTCAATTCCAAAGAA+GGG | + | chr1.1:52969285-52969304 | None:intergenic | 30.0% | |
| TTTGAACTCAATTCCAAAGA+AGG | + | chr1.1:52969286-52969305 | None:intergenic | 30.0% | |
| ! | AAGAGAAAGTGGATTTCTTA+GGG | + | chr1.1:52969257-52969276 | None:intergenic | 30.0% |
| !! | AACTATTTTGTTATGCTGCT+TGG | - | chr1.1:52970063-52970082 | MS.gene49339:CDS | 30.0% |
| !! | CATAAGCCTTAATTTTGACA+AGG | - | chr1.1:52969489-52969508 | MS.gene49339:intron | 30.0% |
| !! | TAGTAGCCTTGTCAAAATTA+AGG | + | chr1.1:52969498-52969517 | None:intergenic | 30.0% |
| !! | TCTTTGGAATTGAGTTCAAA+CGG | - | chr1.1:52969286-52969305 | MS.gene49339:intron | 30.0% |
| AAAAAGGGCTATCGAACATA+TGG | + | chr1.1:52970279-52970298 | None:intergenic | 35.0% | |
| AAAGTTGTGTCTTTGCTTCA+TGG | - | chr1.1:52969058-52969077 | MS.gene49339:intron | 35.0% | |
| AAATCTCATAGCAAAACGGT+TGG | + | chr1.1:52969968-52969987 | None:intergenic | 35.0% | |
| AAGAAAGCAGTTTGAGGATA+AGG | + | chr1.1:52969130-52969149 | None:intergenic | 35.0% | |
| AGAAAGCAGTTTGAGGATAA+GGG | + | chr1.1:52969129-52969148 | None:intergenic | 35.0% | |
| ATGCTAATGGTTACCTATGA+AGG | - | chr1.1:52970553-52970572 | MS.gene49339:CDS | 35.0% | |
| ATTACCTCTTCTTTGAGCAA+TGG | + | chr1.1:52969717-52969736 | None:intergenic | 35.0% | |
| CAAAATTCAGTTCAGGAACT+TGG | - | chr1.1:52969226-52969245 | MS.gene49339:intron | 35.0% | |
| CTAAGAAATCCACTTTCTCT+TGG | - | chr1.1:52969256-52969275 | MS.gene49339:intron | 35.0% | |
| CTATCCTCAAAATTCAGTTC+AGG | - | chr1.1:52969219-52969238 | MS.gene49339:intron | 35.0% | |
| GAATTCTGATCTGAAGAGAT+CGG | + | chr1.1:52969625-52969644 | None:intergenic | 35.0% | |
| GTCTTGATTTCGTTTCTTCA+GGG | - | chr1.1:52970456-52970475 | MS.gene49339:CDS | 35.0% | |
| GTTTGGATCATTCAAGAGTT+AGG | - | chr1.1:52969080-52969099 | MS.gene49339:intron | 35.0% | |
| TAACTTTGTGTGTTCTTGAC+AGG | - | chr1.1:52969811-52969830 | MS.gene49339:CDS | 35.0% | |
| TAGGTAACCATTAGCATAGT+AGG | + | chr1.1:52970550-52970569 | None:intergenic | 35.0% | |
| TCTTGATTTCGTTTCTTCAG+GGG | - | chr1.1:52970457-52970476 | MS.gene49339:CDS | 35.0% | |
| TGTCTTGATTTCGTTTCTTC+AGG | - | chr1.1:52970455-52970474 | MS.gene49339:CDS | 35.0% | |
| TTGTCTAAGAAAGCAGTTTG+AGG | + | chr1.1:52969136-52969155 | None:intergenic | 35.0% | |
| ! | AGTTCCTGAACTGAATTTTG+AGG | + | chr1.1:52969226-52969245 | None:intergenic | 35.0% |
| ! | CAAGAGAAAGTGGATTTCTT+AGG | + | chr1.1:52969258-52969277 | None:intergenic | 35.0% |
| !! | CTGAACTGAATTTTGAGGAT+AGG | + | chr1.1:52969221-52969240 | None:intergenic | 35.0% |
| !! | CTTTGGAATTGAGTTCAAAC+GGG | - | chr1.1:52969287-52969306 | MS.gene49339:intron | 35.0% |
| !!! | AGTGAACATTTTTGGTGTGA+TGG | + | chr1.1:52969186-52969205 | None:intergenic | 35.0% |
| AAAACGGTTGGACATACCTA+GGG | + | chr1.1:52969956-52969975 | None:intergenic | 40.0% | |
| AAAATTAAGGCTTATGCCGC+TGG | + | chr1.1:52969485-52969504 | None:intergenic | 40.0% | |
| AAACTGGTGAAGCTGTGAAT+AGG | - | chr1.1:52969029-52969048 | MS.gene49339:CDS | 40.0% | |
| AAGAGGAAATGTTCTGCTAG+AGG | - | chr1.1:52969652-52969671 | MS.gene49339:CDS | 40.0% | |
| AAGCTGAAATGATGTTCCGA+AGG | - | chr1.1:52969455-52969474 | MS.gene49339:intron | 40.0% | |
| AATGCCATTGCTCAAAGAAG+AGG | - | chr1.1:52969710-52969729 | MS.gene49339:intron | 40.0% | |
| ATCAGAATTCACAGCACAAG+AGG | - | chr1.1:52969635-52969654 | MS.gene49339:CDS | 40.0% | |
| ATTTCCTCCTTGAGCATAGA+CGG | - | chr1.1:52969553-52969572 | MS.gene49339:intron | 40.0% | |
| CATGGGATCAAGTTCATCAT+AGG | - | chr1.1:52968993-52969012 | MS.gene49339:CDS | 40.0% | |
| CTTGATTTCGTTTCTTCAGG+GGG | - | chr1.1:52970458-52970477 | MS.gene49339:CDS | 40.0% | |
| GATTACTCATGGAGGAAGTA+CGG | - | chr1.1:52969903-52969922 | MS.gene49339:CDS | 40.0% | |
| GGAAGTTCCTTCCATTTGAT+TGG | - | chr1.1:52969595-52969614 | MS.gene49339:CDS | 40.0% | |
| TCCATGAGTAATCATCAGGA+GGG | + | chr1.1:52969896-52969915 | None:intergenic | 40.0% | |
| TGTGTCTTTGCTTCATGGTT+TGG | - | chr1.1:52969063-52969082 | MS.gene49339:intron | 40.0% | |
| TTCCTCCATGAGTAATCATC+AGG | + | chr1.1:52969900-52969919 | None:intergenic | 40.0% | |
| TTCTCTTGGAAACCCTTCTT+TGG | - | chr1.1:52969270-52969289 | MS.gene49339:intron | 40.0% | |
| ! | ATTACTCATGGAGGAAGTAC+GGG | - | chr1.1:52969904-52969923 | MS.gene49339:CDS | 40.0% |
| ! | TGATTGATGTACTAGCCTGT+GGG | - | chr1.1:52970140-52970159 | MS.gene49339:CDS | 40.0% |
| AGATCGGAGCTCCAATCAAA+TGG | + | chr1.1:52969609-52969628 | None:intergenic | 45.0% | |
| ATGTTCTGCTAGAGGTGATG+AGG | - | chr1.1:52969660-52969679 | MS.gene49339:CDS | 45.0% | |
| CAAAACGGTTGGACATACCT+AGG | + | chr1.1:52969957-52969976 | None:intergenic | 45.0% | |
| CACCAACAATGTCGTCTACT+AGG | - | chr1.1:52969524-52969543 | MS.gene49339:intron | 45.0% | |
| CATGCATTTGCAGGTTGTGT+TGG | + | chr1.1:52970601-52970620 | None:intergenic | 45.0% | |
| CTCCATGAGTAATCATCAGG+AGG | + | chr1.1:52969897-52969916 | None:intergenic | 45.0% | |
| CTCCTGATGATTACTCATGG+AGG | - | chr1.1:52969895-52969914 | MS.gene49339:CDS | 45.0% | |
| GAAGGGTTTCCAAGAGAAAG+TGG | + | chr1.1:52969268-52969287 | None:intergenic | 45.0% | |
| GACCTAGTAGACGACATTGT+TGG | + | chr1.1:52969529-52969548 | None:intergenic | 45.0% | |
| GGATGAGCCTACTATGCTAA+TGG | - | chr1.1:52970540-52970559 | MS.gene49339:CDS | 45.0% | |
| GTGATTATGCTCGCCTTCAT+AGG | + | chr1.1:52970569-52970588 | None:intergenic | 45.0% | |
| TATAAGTGCAGCAGCATGAG+AGG | - | chr1.1:52970484-52970503 | MS.gene49339:CDS | 45.0% | |
| TCCCTCCTGATGATTACTCA+TGG | - | chr1.1:52969892-52969911 | MS.gene49339:CDS | 45.0% | |
| TCTCAACATGCTTCCTAGCA+GGG | + | chr1.1:52970513-52970532 | None:intergenic | 45.0% | |
| TGCTATCAGCAACAAGCTTG+CGG | - | chr1.1:52969866-52969885 | MS.gene49339:CDS | 45.0% | |
| TGTTCTGCTAGAGGTGATGA+GGG | - | chr1.1:52969661-52969680 | MS.gene49339:CDS | 45.0% | |
| ! | CTGATTGATGTACTAGCCTG+TGG | - | chr1.1:52970139-52970158 | MS.gene49339:CDS | 45.0% |
| ! | GATTGATGTACTAGCCTGTG+GGG | - | chr1.1:52970141-52970160 | MS.gene49339:CDS | 45.0% |
| !! | TTGATGCAGCTTGTTGAGCA+AGG | + | chr1.1:52969327-52969346 | None:intergenic | 45.0% |
| AACAGCAGCTGCAGCAACAA+AGG | - | chr1.1:52969389-52969408 | MS.gene49339:intron | 50.0% | |
| ATGTTCCGAAGGAACACCAG+CGG | - | chr1.1:52969466-52969485 | MS.gene49339:intron | 50.0% | |
| CGGAGCTCCAATCAAATGGA+AGG | + | chr1.1:52969605-52969624 | None:intergenic | 50.0% | |
| CTCTCAACATGCTTCCTAGC+AGG | + | chr1.1:52970514-52970533 | None:intergenic | 50.0% | |
| TACGGGCAGAAGCCTATCAA+GGG | - | chr1.1:52969921-52969940 | MS.gene49339:CDS | 50.0% | |
| TTATGCCGCTGGTGTTCCTT+CGG | + | chr1.1:52969474-52969493 | None:intergenic | 50.0% | |
| TTTGTTGCTGCAGCTGCTGT+TGG | + | chr1.1:52969390-52969409 | None:intergenic | 50.0% | |
| ! | CTGCTAGGAAGCATGTTGAG+AGG | - | chr1.1:52970512-52970531 | MS.gene49339:CDS | 50.0% |
| ! | GCTTGTTGAGCAAGGTGAAG+CGG | + | chr1.1:52969319-52969338 | None:intergenic | 50.0% |
| ! | TGCAGGTTGTGTTGGTACCT+TGG | + | chr1.1:52970593-52970612 | None:intergenic | 50.0% |
| ! | TGGTGATGATGCTGTTGCTG+CGG | + | chr1.1:52969370-52969389 | None:intergenic | 50.0% |
| !! | GAAGCATGTTGAGAGGTGCT+TGG | - | chr1.1:52970519-52970538 | MS.gene49339:CDS | 50.0% |
| !! | GCAAGCTTGTTGCTGATAGC+AGG | + | chr1.1:52969867-52969886 | None:intergenic | 50.0% |
| AGGCGAGCATAATCACGCCA+AGG | - | chr1.1:52970573-52970592 | MS.gene49339:CDS | 55.0% | |
| CACGCTTCCGTCTATGCTCA+AGG | + | chr1.1:52969563-52969582 | None:intergenic | 55.0% | |
| CTTGAGCATAGACGGAAGCG+TGG | - | chr1.1:52969561-52969580 | MS.gene49339:intron | 55.0% | |
| GCTTCCGTCTATGCTCAAGG+AGG | + | chr1.1:52969560-52969579 | None:intergenic | 55.0% | |
| GGTTGGACATACCTAGGGTG+AGG | + | chr1.1:52969951-52969970 | None:intergenic | 55.0% | |
| GTACGGGCAGAAGCCTATCA+AGG | - | chr1.1:52969920-52969939 | MS.gene49339:CDS | 55.0% | |
| GGGTGAGGAGAGCCCTTGAT+AGG | + | chr1.1:52969936-52969955 | None:intergenic | 60.0% | |
| TCAAGGGCTCTCCTCACCCT+AGG | - | chr1.1:52969937-52969956 | MS.gene49339:CDS | 60.0% | |
| ! | AGACGGAAGCGTGGCTAACG+TGG | - | chr1.1:52969570-52969589 | MS.gene49339:intron | 60.0% |
| ! | GGAAGCGTGGCTAACGTGGA+TGG | - | chr1.1:52969574-52969593 | MS.gene49339:intron | 60.0% |
| GCATGAGAGGCTGCCCTGCT+AGG | - | chr1.1:52970497-52970516 | MS.gene49339:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 52968920 | 52970621 | 52968920 | ID=MS.gene49339 |
| chr1.1 | mRNA | 52968920 | 52970621 | 52968920 | ID=MS.gene49339.t1;Parent=MS.gene49339 |
| chr1.1 | exon | 52969810 | 52970621 | 52969810 | ID=MS.gene49339.t1.exon1;Parent=MS.gene49339.t1 |
| chr1.1 | CDS | 52969810 | 52970621 | 52969810 | ID=cds.MS.gene49339.t1;Parent=MS.gene49339.t1 |
| chr1.1 | exon | 52969583 | 52969708 | 52969583 | ID=MS.gene49339.t1.exon2;Parent=MS.gene49339.t1 |
| chr1.1 | CDS | 52969583 | 52969708 | 52969583 | ID=cds.MS.gene49339.t1;Parent=MS.gene49339.t1 |
| chr1.1 | exon | 52968920 | 52969064 | 52968920 | ID=MS.gene49339.t1.exon3;Parent=MS.gene49339.t1 |
| chr1.1 | CDS | 52968920 | 52969064 | 52968920 | ID=cds.MS.gene49339.t1;Parent=MS.gene49339.t1 |
| Gene Sequence |
| Protein sequence |
