Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06081.t1 | XP_013447211.1 | 100 | 158 | 0 | 0 | 56 | 213 | 51 | 208 | 3.50E-84 | 321.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06081.t1 | A0A072TWH9 | 100.0 | 158 | 0 | 0 | 56 | 213 | 51 | 208 | 2.5e-84 | 321.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056618 | MS.gene06081 | 0.813147 | 2.97E-51 | -1.69E-46 |
| MS.gene06081 | MS.gene064000 | 0.815203 | 1.04E-51 | -1.69E-46 |
| MS.gene06081 | MS.gene064509 | 0.811088 | 8.34E-51 | -1.69E-46 |
| MS.gene06081 | MS.gene21055 | 0.805708 | 1.17E-49 | -1.69E-46 |
| MS.gene06081 | MS.gene22987 | 0.824166 | 9.35E-54 | -1.69E-46 |
| MS.gene06081 | MS.gene30897 | 0.823351 | 1.45E-53 | -1.69E-46 |
| MS.gene06081 | MS.gene37156 | 0.818862 | 1.57E-52 | -1.69E-46 |
| MS.gene06081 | MS.gene40749 | 0.808451 | 3.08E-50 | -1.69E-46 |
| MS.gene06081 | MS.gene49339 | 0.816953 | 4.24E-52 | -1.69E-46 |
| MS.gene06081 | MS.gene82422 | 0.823225 | 1.55E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06081.t1 | MTR_8g099560 | 97.653 | 213 | 0 | 1 | 1 | 213 | 1 | 208 | 1.30e-151 | 419 |
| MS.gene06081.t1 | MTR_5g009130 | 62.189 | 201 | 59 | 2 | 15 | 213 | 2 | 187 | 1.17e-81 | 241 |
| MS.gene06081.t1 | MTR_8g005060 | 25.397 | 189 | 122 | 2 | 31 | 213 | 11 | 186 | 1.58e-15 | 72.0 |
| MS.gene06081.t1 | MTR_8g028475 | 25.882 | 170 | 105 | 3 | 51 | 213 | 58 | 213 | 3.77e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06081.t1 | AT4G23930 | 54.737 | 190 | 75 | 2 | 27 | 213 | 6 | 187 | 3.16e-72 | 218 |
| MS.gene06081.t1 | AT4G23930 | 45.989 | 187 | 69 | 2 | 27 | 213 | 6 | 160 | 8.00e-51 | 162 |
| MS.gene06081.t1 | AT1G64450 | 75.439 | 114 | 28 | 0 | 24 | 137 | 11 | 124 | 4.70e-48 | 160 |
| MS.gene06081.t1 | AT1G64450 | 66.071 | 56 | 19 | 0 | 158 | 213 | 287 | 342 | 1.88e-21 | 90.9 |
| MS.gene06081.t1 | AT2G46150 | 23.182 | 220 | 148 | 4 | 1 | 213 | 10 | 215 | 1.32e-15 | 73.2 |
Find 87 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGTTGTGGTGGTGGTGG+TGG | 0.194192 | 4.1:-4490150 | None:intergenic |
| GTCAGTGATGGTTCTGTCTT+AGG | 0.211105 | 4.1:+4490734 | MS.gene06081:CDS |
| GACGGCGTTGACGGCGATCT+TGG | 0.242505 | 4.1:-4490303 | None:intergenic |
| GGTGGTGGTGGTGGGGATGA+TGG | 0.256707 | 4.1:-4490141 | None:intergenic |
| TGGAAATGGCGGGGCGTGTT+AGG | 0.281593 | 4.1:+4490651 | MS.gene06081:CDS |
| ATTGTCGGCACCGCCGAATA+TGG | 0.287443 | 4.1:+4490547 | MS.gene06081:CDS |
| GTGGTTGTGGTGGTGGTGGT+GGG | 0.297778 | 4.1:-4490149 | None:intergenic |
| TGGTCTGGTGGTTGTGGTGG+TGG | 0.302626 | 4.1:-4490156 | None:intergenic |
| ACGGCGTTGACGGCGATCTT+GGG | 0.320567 | 4.1:-4490302 | None:intergenic |
| GATGGTGTTGGGTTTAACTT+TGG | 0.342840 | 4.1:+4490590 | MS.gene06081:CDS |
| GTGGTGGTGGTGGGGATGAT+GGG | 0.350896 | 4.1:-4490140 | None:intergenic |
| TGAGAGAAAGCAGCGCGGTT+AGG | 0.370839 | 4.1:-4490398 | None:intergenic |
| GAGAGAAAGCAGCGCGGTTA+GGG | 0.373279 | 4.1:-4490397 | None:intergenic |
| GCCAAAGTGGGACCCATATT+CGG | 0.374978 | 4.1:-4490560 | None:intergenic |
| GTGTTCTCCCGGCGTCGATC+TGG | 0.376234 | 4.1:-4490487 | None:intergenic |
| GGAAATGGCGGGGCGTGTTA+GGG | 0.383591 | 4.1:+4490652 | MS.gene06081:CDS |
| TTAAGGTTAGAACTGGTTGC+AGG | 0.383985 | 4.1:+4490699 | MS.gene06081:CDS |
| TCTGGTGGTTGTGGTGGTGG+TGG | 0.387608 | 4.1:-4490153 | None:intergenic |
| AAAAGACCACGCCCACCTTC+CGG | 0.388668 | 4.1:+4490179 | MS.gene06081:CDS |
| ATGGTGTTGGGTTTAACTTT+GGG | 0.391153 | 4.1:+4490591 | MS.gene06081:CDS |
| CATGAACCCGACTTGGTTAC+CGG | 0.394370 | 4.1:-4490450 | None:intergenic |
| TTTCTTCACTCATCGTGTTA+AGG | 0.415888 | 4.1:+4490682 | MS.gene06081:CDS |
| TCAGTGATGGTTCTGTCTTA+GGG | 0.421817 | 4.1:+4490735 | MS.gene06081:CDS |
| CCCTCCTTCTCCGTCATTAA+CGG | 0.427037 | 4.1:+4490332 | MS.gene06081:CDS |
| AGGTTGGTACGGCCGGAAGG+TGG | 0.442700 | 4.1:-4490191 | None:intergenic |
| CATCGTGTTAAGGTTAGAAC+TGG | 0.444320 | 4.1:+4490692 | MS.gene06081:CDS |
| TGGCGAATGGTGATGGTGTT+GGG | 0.449054 | 4.1:+4490579 | MS.gene06081:CDS |
| TTGTCGGCACCGCCGAATAT+GGG | 0.459364 | 4.1:+4490548 | MS.gene06081:CDS |
| CTCTCACTACGACAGCTCTC+TGG | 0.467031 | 4.1:+4490415 | MS.gene06081:CDS |
| GGGGAGTTGGACGGCGTTGA+CGG | 0.468284 | 4.1:-4490312 | None:intergenic |
| TTGGCGAATGGTGATGGTGT+TGG | 0.471013 | 4.1:+4490578 | MS.gene06081:CDS |
| TGACGGAGAAGGAGGGGAGT+TGG | 0.480411 | 4.1:-4490325 | None:intergenic |
| CCACCGGAGGCCATGGCGGA+TGG | 0.481877 | 4.1:+4490116 | None:intergenic |
| TCTACTCCGGTAACCAAGTC+GGG | 0.482954 | 4.1:+4490444 | MS.gene06081:CDS |
| GGTTGGTACGGCCGGAAGGT+GGG | 0.487029 | 4.1:-4490190 | None:intergenic |
| GTACGGCCGGAAGGTGGGCG+TGG | 0.488533 | 4.1:-4490185 | None:intergenic |
| GATTGAGTCGAAGTTGGAAA+TGG | 0.491303 | 4.1:+4490637 | MS.gene06081:CDS |
| GAGTCGAAGTTGGAAATGGC+GGG | 0.496312 | 4.1:+4490641 | MS.gene06081:CDS |
| GCCGAATATGGGTCCCACTT+TGG | 0.498831 | 4.1:+4490559 | MS.gene06081:CDS |
| CCGGCGTCGATCTGGCCGGC+GGG | 0.499196 | 4.1:-4490479 | None:intergenic |
| CGCCGGGAGAACACAGTACA+TGG | 0.510614 | 4.1:+4490496 | MS.gene06081:CDS |
| GATGGAGATTGAGTCGAAGT+TGG | 0.513967 | 4.1:+4490631 | MS.gene06081:CDS |
| TACTACACATGAGGCTAGGT+TGG | 0.516593 | 4.1:-4490207 | None:intergenic |
| GCTAGGTTGGTACGGCCGGA+AGG | 0.521980 | 4.1:-4490194 | None:intergenic |
| TGAGGCTAGGTTGGTACGGC+CGG | 0.524665 | 4.1:-4490198 | None:intergenic |
| CCCACTTTGGCGAATGGTGA+TGG | 0.526436 | 4.1:+4490572 | MS.gene06081:CDS |
| TTCGACTCAATCTCCATCGT+TGG | 0.528291 | 4.1:-4490626 | None:intergenic |
| CCCGCCGGCCAGATCGACGC+CGG | 0.530026 | 4.1:+4490479 | MS.gene06081:CDS |
| AGCCATGTACTGTGTTCTCC+CGG | 0.534516 | 4.1:-4490498 | None:intergenic |
| GTTGCCATTGCTGTCAGTGA+TGG | 0.535555 | 4.1:+4490722 | MS.gene06081:CDS |
| ACGGCGATCTTGGGGTCTTG+TGG | 0.544535 | 4.1:-4490293 | None:intergenic |
| CCGCCGGCCAGATCGACGCC+GGG | 0.547168 | 4.1:+4490480 | MS.gene06081:CDS |
| ACCATCACCATTCGCCAAAG+TGG | 0.549047 | 4.1:-4490573 | None:intergenic |
| CCCGGCGTCGATCTGGCCGG+CGG | 0.549546 | 4.1:-4490480 | None:intergenic |
| GAATGAACATGAACCCGACT+TGG | 0.550035 | 4.1:-4490457 | None:intergenic |
| ATGGGTCCCACTTTGGCGAA+TGG | 0.552816 | 4.1:+4490566 | MS.gene06081:CDS |
| CGGCGTTGACGGCGATCTTG+GGG | 0.553414 | 4.1:-4490301 | None:intergenic |
| CTCTACTCCGGTAACCAAGT+CGG | 0.564611 | 4.1:+4490443 | MS.gene06081:CDS |
| GATGATGGGTCCATCCGCCA+TGG | 0.565426 | 4.1:-4490126 | None:intergenic |
| CGACTTGGTTACCGGAGTAG+AGG | 0.566377 | 4.1:-4490442 | None:intergenic |
| TCTCCCGGCGTCGATCTGGC+CGG | 0.570123 | 4.1:-4490483 | None:intergenic |
| TTGAGAGAAGGTGAAGTTGA+CGG | 0.573579 | 4.1:-4490357 | None:intergenic |
| GGAGAAGGAGGGGAGTTGGA+CGG | 0.575469 | 4.1:-4490321 | None:intergenic |
| GCCGTTAATGACGGAGAAGG+AGG | 0.575839 | 4.1:-4490333 | None:intergenic |
| ATATTCGGCGGTGCCGACAA+TGG | 0.577166 | 4.1:-4490545 | None:intergenic |
| CGTTAATGACGGAGAAGGAG+GGG | 0.582389 | 4.1:-4490331 | None:intergenic |
| TGAGTCGAAGTTGGAAATGG+CGG | 0.582532 | 4.1:+4490640 | MS.gene06081:CDS |
| GTTGACGGTGCCGTTAATGA+CGG | 0.585492 | 4.1:-4490342 | None:intergenic |
| TAAGGTTAGAACTGGTTGCA+GGG | 0.590505 | 4.1:+4490700 | MS.gene06081:CDS |
| CCGTTAATGACGGAGAAGGA+GGG | 0.593361 | 4.1:-4490332 | None:intergenic |
| CACATGAGGCTAGGTTGGTA+CGG | 0.595304 | 4.1:-4490202 | None:intergenic |
| AGAACCATCACTGACAGCAA+TGG | 0.604059 | 4.1:-4490726 | None:intergenic |
| GGGTTCATGTTCATTCCCGC+CGG | 0.606888 | 4.1:+4490464 | MS.gene06081:CDS |
| GCGGTTAGGGTTTCTAACGG+AGG | 0.613296 | 4.1:-4490384 | None:intergenic |
| AACGGAGGCGTATTGAGAGA+AGG | 0.618924 | 4.1:-4490369 | None:intergenic |
| CCATCACCATTCGCCAAAGT+GGG | 0.620750 | 4.1:-4490572 | None:intergenic |
| AGCGCGGTTAGGGTTTCTAA+CGG | 0.621122 | 4.1:-4490387 | None:intergenic |
| GATGAAAATCAAGAAGATTG+TGG | 0.624966 | 4.1:-4490231 | None:intergenic |
| AGTCGAAGTTGGAAATGGCG+GGG | 0.629312 | 4.1:+4490642 | MS.gene06081:CDS |
| TGGCTACTACACATGAGGCT+AGG | 0.639873 | 4.1:-4490211 | None:intergenic |
| TCTCTGGAAATCCTCTACTC+CGG | 0.640148 | 4.1:+4490431 | MS.gene06081:CDS |
| GGTGCCGTTAATGACGGAGA+AGG | 0.643119 | 4.1:-4490336 | None:intergenic |
| AAACTGTGTAGTAGACTATG+AGG | 0.658914 | 4.1:-4490265 | None:intergenic |
| GATTGTGGCTACTACACATG+AGG | 0.675151 | 4.1:-4490216 | None:intergenic |
| GTTGAGAGTACAACCAACGA+TGG | 0.705303 | 4.1:+4490613 | MS.gene06081:CDS |
| AAAGTGGGACCCATATTCGG+CGG | 0.728379 | 4.1:-4490557 | None:intergenic |
| CGTAGTGAGAGAAAGCAGCG+CGG | 0.823070 | 4.1:-4490403 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GATGAAAATCAAGAAGATTG+TGG | - | chr4.1:4490234-4490253 | None:intergenic | 30.0% | |
| AAACTGTGTAGTAGACTATG+AGG | - | chr4.1:4490268-4490287 | None:intergenic | 35.0% | |
| TTTCTTCACTCATCGTGTTA+AGG | + | chr4.1:4490682-4490701 | MS.gene06081:CDS | 35.0% | |
| ! | AGTTCAGTCTTTTCCATTGT+CGG | + | chr4.1:4490532-4490551 | MS.gene06081:CDS | 35.0% |
| ! | ATGGTGTTGGGTTTAACTTT+GGG | + | chr4.1:4490591-4490610 | MS.gene06081:CDS | 35.0% |
| CATCGTGTTAAGGTTAGAAC+TGG | + | chr4.1:4490692-4490711 | MS.gene06081:CDS | 40.0% | |
| GATTGAGTCGAAGTTGGAAA+TGG | + | chr4.1:4490637-4490656 | MS.gene06081:CDS | 40.0% | |
| TAAGGTTAGAACTGGTTGCA+GGG | + | chr4.1:4490700-4490719 | MS.gene06081:CDS | 40.0% | |
| TTAAGGTTAGAACTGGTTGC+AGG | + | chr4.1:4490699-4490718 | MS.gene06081:CDS | 40.0% | |
| TTGAGAGAAGGTGAAGTTGA+CGG | - | chr4.1:4490360-4490379 | None:intergenic | 40.0% | |
| ! | GATGGTGTTGGGTTTAACTT+TGG | + | chr4.1:4490590-4490609 | MS.gene06081:CDS | 40.0% |
| ! | TCAGTGATGGTTCTGTCTTA+GGG | + | chr4.1:4490735-4490754 | MS.gene06081:CDS | 40.0% |
| AGAACCATCACTGACAGCAA+TGG | - | chr4.1:4490729-4490748 | None:intergenic | 45.0% | |
| GAATGAACATGAACCCGACT+TGG | - | chr4.1:4490460-4490479 | None:intergenic | 45.0% | |
| GATGGAGATTGAGTCGAAGT+TGG | + | chr4.1:4490631-4490650 | MS.gene06081:CDS | 45.0% | |
| GATTGTGGCTACTACACATG+AGG | - | chr4.1:4490219-4490238 | None:intergenic | 45.0% | |
| TACTACACATGAGGCTAGGT+TGG | - | chr4.1:4490210-4490229 | None:intergenic | 45.0% | |
| TGAGTCGAAGTTGGAAATGG+CGG | + | chr4.1:4490640-4490659 | MS.gene06081:CDS | 45.0% | |
| TTCGACTCAATCTCCATCGT+TGG | - | chr4.1:4490629-4490648 | None:intergenic | 45.0% | |
| ! | GTCAGTGATGGTTCTGTCTT+AGG | + | chr4.1:4490734-4490753 | MS.gene06081:CDS | 45.0% |
| ! | GTTGAGAGTACAACCAACGA+TGG | + | chr4.1:4490613-4490632 | MS.gene06081:CDS | 45.0% |
| ! | TCTCTGGAAATCCTCTACTC+CGG | + | chr4.1:4490431-4490450 | MS.gene06081:CDS | 45.0% |
| !! | TCTTTTTGGTCTGGTGGTTG+TGG | - | chr4.1:4490165-4490184 | None:intergenic | 45.0% |
| AAAGTGGGACCCATATTCGG+CGG | - | chr4.1:4490560-4490579 | None:intergenic | 50.0% | |
| ACCATCACCATTCGCCAAAG+TGG | - | chr4.1:4490576-4490595 | None:intergenic | 50.0% | |
| AGCCATGTACTGTGTTCTCC+CGG | - | chr4.1:4490501-4490520 | None:intergenic | 50.0% | |
| AGCGCGGTTAGGGTTTCTAA+CGG | - | chr4.1:4490390-4490409 | None:intergenic | 50.0% | |
| AGTCGAAGTTGGAAATGGCG+GGG | + | chr4.1:4490642-4490661 | MS.gene06081:CDS | 50.0% | |
| CCATCACCATTCGCCAAAGT+GGG | - | chr4.1:4490575-4490594 | None:intergenic | 50.0% | |
| CCCTCCTTCTCCGTCATTAA+CGG | + | chr4.1:4490332-4490351 | MS.gene06081:CDS | 50.0% | |
| CTCTACTCCGGTAACCAAGT+CGG | + | chr4.1:4490443-4490462 | MS.gene06081:CDS | 50.0% | |
| GAGTCGAAGTTGGAAATGGC+GGG | + | chr4.1:4490641-4490660 | MS.gene06081:CDS | 50.0% | |
| GCCAAAGTGGGACCCATATT+CGG | - | chr4.1:4490563-4490582 | None:intergenic | 50.0% | |
| GTTGCCATTGCTGTCAGTGA+TGG | + | chr4.1:4490722-4490741 | MS.gene06081:CDS | 50.0% | |
| TCTACTCCGGTAACCAAGTC+GGG | + | chr4.1:4490444-4490463 | MS.gene06081:CDS | 50.0% | |
| TGGCTACTACACATGAGGCT+AGG | - | chr4.1:4490214-4490233 | None:intergenic | 50.0% | |
| ! | AACGGAGGCGTATTGAGAGA+AGG | - | chr4.1:4490372-4490391 | None:intergenic | 50.0% |
| ! | CCGTTAATGACGGAGAAGGA+GGG | - | chr4.1:4490335-4490354 | None:intergenic | 50.0% |
| ! | CGTTAATGACGGAGAAGGAG+GGG | - | chr4.1:4490334-4490353 | None:intergenic | 50.0% |
| ! | TTTTGGTCTGGTGGTTGTGG+TGG | - | chr4.1:4490162-4490181 | None:intergenic | 50.0% |
| !! | CACATGAGGCTAGGTTGGTA+CGG | - | chr4.1:4490205-4490224 | None:intergenic | 50.0% |
| !! | CATGAACCCGACTTGGTTAC+CGG | - | chr4.1:4490453-4490472 | None:intergenic | 50.0% |
| !! | GTTGACGGTGCCGTTAATGA+CGG | - | chr4.1:4490345-4490364 | None:intergenic | 50.0% |
| !! | TGGCGAATGGTGATGGTGTT+GGG | + | chr4.1:4490579-4490598 | MS.gene06081:CDS | 50.0% |
| !! | TTGGCGAATGGTGATGGTGT+TGG | + | chr4.1:4490578-4490597 | MS.gene06081:CDS | 50.0% |
| AAAAGACCACGCCCACCTTC+CGG | + | chr4.1:4490179-4490198 | MS.gene06081:CDS | 55.0% | |
| ATGGGTCCCACTTTGGCGAA+TGG | + | chr4.1:4490566-4490585 | MS.gene06081:CDS | 55.0% | |
| ATTGTCGGCACCGCCGAATA+TGG | + | chr4.1:4490547-4490566 | MS.gene06081:CDS | 55.0% | |
| CCCACTTTGGCGAATGGTGA+TGG | + | chr4.1:4490572-4490591 | MS.gene06081:CDS | 55.0% | |
| CGTAGTGAGAGAAAGCAGCG+CGG | - | chr4.1:4490406-4490425 | None:intergenic | 55.0% | |
| CTCTCACTACGACAGCTCTC+TGG | + | chr4.1:4490415-4490434 | MS.gene06081:CDS | 55.0% | |
| GAGAGAAAGCAGCGCGGTTA+GGG | - | chr4.1:4490400-4490419 | None:intergenic | 55.0% | |
| GCCGAATATGGGTCCCACTT+TGG | + | chr4.1:4490559-4490578 | MS.gene06081:CDS | 55.0% | |
| GCGGTTAGGGTTTCTAACGG+AGG | - | chr4.1:4490387-4490406 | None:intergenic | 55.0% | |
| GGGTTCATGTTCATTCCCGC+CGG | + | chr4.1:4490464-4490483 | MS.gene06081:CDS | 55.0% | |
| TGAGAGAAAGCAGCGCGGTT+AGG | - | chr4.1:4490401-4490420 | None:intergenic | 55.0% | |
| TTGTCGGCACCGCCGAATAT+GGG | + | chr4.1:4490548-4490567 | MS.gene06081:CDS | 55.0% | |
| ! | GAAGGTGGGCGTGGTCTTTT+TGG | - | chr4.1:4490179-4490198 | None:intergenic | 55.0% |
| ! | GCCGTTAATGACGGAGAAGG+AGG | - | chr4.1:4490336-4490355 | None:intergenic | 55.0% |
| !! | ATATTCGGCGGTGCCGACAA+TGG | - | chr4.1:4490548-4490567 | None:intergenic | 55.0% |
| !! | CGACTTGGTTACCGGAGTAG+AGG | - | chr4.1:4490445-4490464 | None:intergenic | 55.0% |
| !! | GCGTGGTCTTTTTGGTCTGG+TGG | - | chr4.1:4490171-4490190 | None:intergenic | 55.0% |
| !! | GGTGCCGTTAATGACGGAGA+AGG | - | chr4.1:4490339-4490358 | None:intergenic | 55.0% |
| !! | TGGGCGTGGTCTTTTTGGTC+TGG | - | chr4.1:4490174-4490193 | None:intergenic | 55.0% |
| ACGGCGATCTTGGGGTCTTG+TGG | - | chr4.1:4490296-4490315 | None:intergenic | 60.0% | |
| CGCCGGGAGAACACAGTACA+TGG | + | chr4.1:4490496-4490515 | MS.gene06081:CDS | 60.0% | |
| GGAGAAGGAGGGGAGTTGGA+CGG | - | chr4.1:4490324-4490343 | None:intergenic | 60.0% | |
| TGACGGAGAAGGAGGGGAGT+TGG | - | chr4.1:4490328-4490347 | None:intergenic | 60.0% | |
| TGGTCTGGTGGTTGTGGTGG+TGG | - | chr4.1:4490159-4490178 | None:intergenic | 60.0% | |
| ! | GGAAATGGCGGGGCGTGTTA+GGG | + | chr4.1:4490652-4490671 | MS.gene06081:CDS | 60.0% |
| ! | TGGAAATGGCGGGGCGTGTT+AGG | + | chr4.1:4490651-4490670 | MS.gene06081:CDS | 60.0% |
| !! | ACGGCGTTGACGGCGATCTT+GGG | - | chr4.1:4490305-4490324 | None:intergenic | 60.0% |
| !! | GTGGTGGTGGTGGGGATGAT+GGG | - | chr4.1:4490143-4490162 | None:intergenic | 60.0% |
| !! | GTGGTTGTGGTGGTGGTGGT+GGG | - | chr4.1:4490152-4490171 | None:intergenic | 60.0% |
| !! | TCTGGTGGTTGTGGTGGTGG+TGG | - | chr4.1:4490156-4490175 | None:intergenic | 60.0% |
| !! | TGAGGCTAGGTTGGTACGGC+CGG | - | chr4.1:4490201-4490220 | None:intergenic | 60.0% |
| !! | TGGTTGTGGTGGTGGTGGTG+GGG | - | chr4.1:4490151-4490170 | None:intergenic | 60.0% |
| ! | GGGGAGTTGGACGGCGTTGA+CGG | - | chr4.1:4490315-4490334 | None:intergenic | 65.0% |
| ! | GGTTGGTACGGCCGGAAGGT+GGG | - | chr4.1:4490193-4490212 | None:intergenic | 65.0% |
| !! | AGGTTGGTACGGCCGGAAGG+TGG | - | chr4.1:4490194-4490213 | None:intergenic | 65.0% |
| !! | CGGCGTTGACGGCGATCTTG+GGG | - | chr4.1:4490304-4490323 | None:intergenic | 65.0% |
| !! | GACGGCGTTGACGGCGATCT+TGG | - | chr4.1:4490306-4490325 | None:intergenic | 65.0% |
| !! | GCTAGGTTGGTACGGCCGGA+AGG | - | chr4.1:4490197-4490216 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGTGGGGATGA+TGG | - | chr4.1:4490144-4490163 | None:intergenic | 65.0% |
| !! | GGTGGTTGTGGTGGTGGTGG+TGG | - | chr4.1:4490153-4490172 | None:intergenic | 65.0% |
| !! | GTGTTCTCCCGGCGTCGATC+TGG | - | chr4.1:4490490-4490509 | None:intergenic | 65.0% |
| !! | TCTCCCGGCGTCGATCTGGC+CGG | - | chr4.1:4490486-4490505 | None:intergenic | 70.0% |
| GTACGGCCGGAAGGTGGGCG+TGG | - | chr4.1:4490188-4490207 | None:intergenic | 75.0% | |
| ! | CCCGCCGGCCAGATCGACGC+CGG | + | chr4.1:4490479-4490498 | MS.gene06081:CDS | 80.0% |
| ! | CCGCCGGCCAGATCGACGCC+GGG | + | chr4.1:4490480-4490499 | MS.gene06081:CDS | 80.0% |
| !!! | CCCGGCGTCGATCTGGCCGG+CGG | - | chr4.1:4490483-4490502 | None:intergenic | 80.0% |
| !!! | CCGGCGTCGATCTGGCCGGC+GGG | - | chr4.1:4490482-4490501 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 4490128 | 4490769 | 4490128 | ID=MS.gene06081 |
| chr4.1 | mRNA | 4490128 | 4490769 | 4490128 | ID=MS.gene06081.t1;Parent=MS.gene06081 |
| chr4.1 | exon | 4490128 | 4490769 | 4490128 | ID=MS.gene06081.t1.exon1;Parent=MS.gene06081.t1 |
| chr4.1 | CDS | 4490128 | 4490769 | 4490128 | ID=cds.MS.gene06081.t1;Parent=MS.gene06081.t1 |
| Gene Sequence |
| Protein sequence |
