AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50823

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50823.t1 MTR_8g062720 96.970 594 16 1 1 592 1 594 0.0 1190
MS.gene50823.t1 MTR_6g039840 31.472 197 110 6 89 276 110 290 1.12e-21 99.8
MS.gene50823.t1 MTR_6g039840 30.653 199 121 5 356 550 301 486 5.93e-17 85.1
MS.gene50823.t1 MTR_3g467550 29.808 208 138 4 345 550 286 487 1.86e-18 89.4
MS.gene50823.t1 MTR_3g467550 29.000 200 114 7 111 301 139 319 2.51e-12 70.1
MS.gene50823.t1 MTR_3g467550 29.808 208 138 4 345 550 255 456 2.17e-18 89.0
MS.gene50823.t1 MTR_3g467550 29.000 200 114 7 111 301 108 288 2.15e-12 70.1
MS.gene50823.t1 MTR_4g459350 32.308 195 111 7 87 274 39 219 2.31e-18 85.9
MS.gene50823.t1 MTR_1g054630 33.951 162 95 5 398 552 380 536 3.78e-18 88.6
MS.gene50823.t1 MTR_1g054630 27.320 194 119 6 89 274 154 333 4.83e-11 65.9
MS.gene50823.t1 MTR_2g055850 28.421 190 118 4 89 274 91 266 4.22e-18 88.2
MS.gene50823.t1 MTR_2g055850 37.634 93 57 1 435 526 339 431 6.59e-14 75.1
MS.gene50823.t1 MTR_4g059460 32.308 195 111 7 87 274 42 222 1.63e-17 86.7
MS.gene50823.t1 MTR_4g059460 27.632 152 86 3 397 530 314 459 1.32e-11 67.8
MS.gene50823.t1 MTR_2g043360 32.308 195 111 7 87 274 39 219 2.05e-17 86.3
MS.gene50823.t1 MTR_2g043360 28.289 152 85 3 397 530 311 456 7.35e-12 68.6
MS.gene50823.t1 MTR_1g083130 30.319 188 116 4 85 267 22 199 2.93e-17 85.9
MS.gene50823.t1 MTR_6g039840 39.167 120 69 2 434 550 192 310 7.33e-17 84.3
MS.gene50823.t1 MTR_3g118120 32.432 185 109 6 356 528 318 498 1.91e-16 82.8
MS.gene50823.t1 MTR_3g118120 31.472 197 110 8 70 259 119 297 1.64e-15 80.1
MS.gene50823.t1 MTR_4g105100 32.609 138 88 2 435 567 448 585 2.35e-16 82.8
MS.gene50823.t1 MTR_4g105100 28.646 192 120 4 103 291 216 393 6.78e-14 75.1
MS.gene50823.t1 MTR_6g005320 30.208 192 114 8 89 274 249 426 3.78e-16 82.4
MS.gene50823.t1 MTR_6g005320 32.544 169 94 5 379 537 456 614 4.36e-14 75.9
MS.gene50823.t1 MTR_6g005550 31.818 220 116 10 67 272 137 336 4.18e-16 82.4
MS.gene50823.t1 MTR_4g134170 29.665 209 125 9 74 274 270 464 4.30e-16 82.4
MS.gene50823.t1 MTR_4g134170 40.196 102 60 1 437 537 553 654 1.80e-14 77.0
MS.gene50823.t1 MTR_2g100230 33.835 133 80 3 425 552 335 464 1.08e-15 80.5
MS.gene50823.t1 MTR_2g100230 28.571 189 108 5 111 291 118 287 7.46e-13 71.6
MS.gene50823.t1 MTR_3g083690 35.971 139 80 3 436 567 407 543 2.50e-15 79.7
MS.gene50823.t1 MTR_4g079320 27.442 215 135 5 89 299 19 216 4.67e-15 79.0
MS.gene50823.t1 MTR_7g076830 33.858 127 81 2 433 558 379 503 1.06e-14 77.4
MS.gene50823.t1 MTR_7g076820 33.858 127 81 2 433 558 386 510 1.21e-14 77.4
MS.gene50823.t1 MTR_7g076800 33.858 127 81 2 433 558 377 501 1.29e-14 77.0
MS.gene50823.t1 MTR_2g041140 34.532 139 89 2 415 551 368 506 1.37e-14 77.4
MS.gene50823.t1 MTR_2g041140 29.268 205 114 7 82 273 128 314 5.79e-14 75.5
MS.gene50823.t1 MTR_4g112340 29.891 184 102 5 100 274 108 273 1.64e-14 77.0
MS.gene50823.t1 MTR_4g112340 33.835 133 84 4 435 565 346 476 2.82e-12 70.1
MS.gene50823.t1 MTR_3g049990 29.902 204 107 8 81 273 146 324 1.93e-14 77.0
MS.gene50823.t1 MTR_3g049990 36.134 119 74 2 435 551 398 516 3.86e-14 76.3
MS.gene50823.t1 MTR_2g007000 23.980 196 135 4 89 281 504 688 2.03e-14 77.4
MS.gene50823.t1 MTR_4g114120 35.833 120 72 2 431 547 399 516 2.45e-14 76.6
MS.gene50823.t1 MTR_2g063080 29.016 193 119 5 89 271 109 293 3.63e-14 75.9
MS.gene50823.t1 MTR_8g097000 30.387 181 109 6 101 274 300 470 6.14e-14 75.5
MS.gene50823.t1 MTR_6g082080 37.273 110 64 2 436 542 253 360 6.63e-14 74.7
MS.gene50823.t1 MTR_6g082080 29.167 192 111 6 89 274 10 182 5.93e-13 71.6
MS.gene50823.t1 MTR_7g056830 37.273 110 64 2 436 542 253 360 7.92e-14 74.3
MS.gene50823.t1 MTR_7g056830 29.167 192 111 6 89 274 10 182 2.47e-13 72.8
MS.gene50823.t1 MTR_4g105100 28.646 192 120 4 103 291 216 393 8.53e-14 74.7
MS.gene50823.t1 MTR_5g027840 34.400 125 77 2 434 553 353 477 3.92e-13 72.4
MS.gene50823.t1 MTR_4g112320 33.835 133 84 4 435 565 164 294 1.20e-12 70.5
MS.gene50823.t1 MTR_8g027775 30.233 172 93 6 112 271 125 281 1.29e-12 70.9
MS.gene50823.t1 MTR_8g042690 27.219 169 110 2 98 266 27 182 1.72e-12 70.1
MS.gene50823.t1 MTR_8g027770 27.391 230 132 8 77 291 191 400 2.07e-12 70.5
MS.gene50823.t1 MTR_8g027770 25.654 191 134 4 341 530 373 556 1.11e-11 68.2
MS.gene50823.t1 MTR_8g027780 28.218 202 117 6 80 272 104 286 2.31e-12 69.7
MS.gene50823.t1 MTR_2g032630 27.315 216 121 7 88 291 495 686 2.91e-12 70.5
MS.gene50823.t1 MTR_2g032630 24.691 243 152 7 345 571 663 890 2.56e-11 67.4
MS.gene50823.t1 MTR_8g027780 28.218 202 117 6 80 272 104 286 3.60e-12 69.7
MS.gene50823.t1 MTR_2g066050 34.921 126 77 2 423 547 290 411 4.04e-12 69.3
MS.gene50823.t1 MTR_2g066050 26.577 222 147 6 89 307 53 261 1.76e-11 67.4
MS.gene50823.t1 MTR_2g043360 28.289 152 85 3 397 530 193 338 4.28e-12 68.9
MS.gene50823.t1 MTR_4g131750 24.775 222 131 7 322 525 239 442 5.26e-12 68.9
MS.gene50823.t1 MTR_7g057250 28.000 200 125 9 89 274 163 357 5.51e-12 69.3
MS.gene50823.t1 MTR_7g057250 31.852 135 87 2 432 561 474 608 4.57e-11 66.2
MS.gene50823.t1 MTR_6g033070 28.230 209 123 7 88 287 139 329 6.81e-12 68.6
MS.gene50823.t1 MTR_3g467550 29.000 200 114 7 111 301 139 319 9.33e-12 67.8
MS.gene50823.t1 MTR_1g095810 25.248 202 133 4 343 542 320 505 2.01e-11 67.4
MS.gene50823.t1 MTR_4g077370 27.451 204 120 4 88 291 1 176 2.56e-11 66.6
MS.gene50823.t1 MTR_4g077370 27.523 218 123 5 85 291 246 439 4.45e-11 65.9
MS.gene50823.t1 MTR_3g449250 33.621 116 75 2 435 549 336 450 3.89e-11 66.2
MS.gene50823.t1 MTR_3g449250 33.621 116 75 2 435 549 336 450 4.05e-11 66.2
MS.gene50823.t1 MTR_1g026830 24.752 202 134 4 343 542 322 507 4.48e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50823.t1 AT1G59990 58.960 519 194 7 66 575 58 566 0.0 596
MS.gene50823.t1 AT1G59990 58.767 519 195 7 66 575 58 566 0.0 594
MS.gene50823.t1 AT2G40700 26.809 470 268 16 87 530 29 448 1.34e-28 120
MS.gene50823.t1 AT4G34910 30.864 243 143 6 89 326 47 269 9.45e-21 97.1
MS.gene50823.t1 AT4G09730 30.000 210 130 5 345 550 293 489 3.86e-18 88.6
MS.gene50823.t1 AT4G09730 30.000 190 118 6 89 274 113 291 5.09e-17 85.1
MS.gene50823.t1 AT5G63120 32.836 134 85 2 435 563 412 545 2.49e-16 82.8
MS.gene50823.t1 AT5G63120 26.425 193 125 4 102 291 179 357 1.64e-12 70.9
MS.gene50823.t1 AT5G08610 30.233 215 130 7 62 271 363 562 7.82e-16 81.6
MS.gene50823.t1 AT4G16630 30.374 214 114 9 74 273 148 340 1.05e-15 81.3
MS.gene50823.t1 AT4G16630 34.783 115 72 2 435 547 414 527 1.43e-12 71.2
MS.gene50823.t1 AT1G31970 35.811 148 84 4 434 576 367 508 1.06e-15 80.9
MS.gene50823.t1 AT3G18600 27.426 237 150 7 87 316 88 309 1.23e-15 80.5
MS.gene50823.t1 AT3G18600 37.634 93 57 1 435 526 336 428 1.86e-13 73.6
MS.gene50823.t1 AT2G42520 31.690 142 94 2 403 543 390 529 1.51e-15 80.5
MS.gene50823.t1 AT2G42520 31.690 142 94 2 403 543 390 529 1.51e-15 80.5
MS.gene50823.t1 AT2G42520 31.690 142 94 2 403 543 390 529 1.51e-15 80.5
MS.gene50823.t1 AT1G77030 28.037 214 133 4 90 299 30 226 1.72e-15 80.5
MS.gene50823.t1 AT1G55150 34.586 133 79 3 425 552 339 468 1.82e-15 79.7
MS.gene50823.t1 AT1G55150 24.766 214 144 4 89 299 100 299 3.87e-12 69.3
MS.gene50823.t1 AT5G08620 27.863 262 161 9 56 311 55 294 1.96e-15 80.1
MS.gene50823.t1 AT1G55150 34.586 133 79 3 425 552 364 493 2.25e-15 79.7
MS.gene50823.t1 AT1G55150 24.766 214 144 4 89 299 125 324 4.02e-12 69.3
MS.gene50823.t1 AT5G65900 26.471 238 151 6 87 316 153 374 3.06e-15 79.3
MS.gene50823.t1 AT5G65900 30.233 129 85 3 432 558 399 524 6.16e-13 72.0
MS.gene50823.t1 AT1G12770 27.895 190 122 5 89 271 111 292 6.87e-15 78.2
MS.gene50823.t1 AT1G12770 27.895 190 122 5 89 271 111 292 6.87e-15 78.2
MS.gene50823.t1 AT5G63630 28.986 207 120 7 77 272 239 429 7.85e-15 78.2
MS.gene50823.t1 AT4G00660 35.772 123 76 2 433 554 368 488 8.65e-15 77.8
MS.gene50823.t1 AT4G00660 35.772 123 76 2 433 554 368 488 8.65e-15 77.8
MS.gene50823.t1 AT3G58570 37.736 106 65 1 436 540 408 513 1.09e-14 77.8
MS.gene50823.t1 AT3G58510 37.615 109 67 1 436 543 411 519 1.25e-14 77.4
MS.gene50823.t1 AT3G58510 37.615 109 67 1 436 543 411 519 1.25e-14 77.4
MS.gene50823.t1 AT3G58510 37.615 109 67 1 436 543 411 519 1.25e-14 77.4
MS.gene50823.t1 AT2G45810 35.714 112 67 2 433 541 391 500 1.37e-14 77.0
MS.gene50823.t1 AT5G63630 28.986 207 120 7 77 272 45 235 1.50e-14 77.0
MS.gene50823.t1 AT5G14610 28.230 209 128 5 88 291 169 360 2.36e-14 76.6
MS.gene50823.t1 AT5G60990 29.231 195 122 6 89 275 10 196 2.45e-14 75.9
MS.gene50823.t1 AT5G60990 36.364 110 65 2 436 542 263 370 4.38e-13 72.0
MS.gene50823.t1 AT5G14610 28.230 209 128 5 88 291 161 352 2.88e-14 76.3
MS.gene50823.t1 AT5G14610 28.230 209 128 5 88 291 169 360 3.11e-14 75.9
MS.gene50823.t1 AT5G14610 28.230 209 128 5 88 291 161 352 3.24e-14 76.3
MS.gene50823.t1 AT2G33730 38.053 113 69 1 432 543 575 687 4.23e-14 75.9
MS.gene50823.t1 AT2G33730 28.796 191 118 7 89 274 314 491 1.49e-13 74.3
MS.gene50823.t1 AT3G61240 34.545 110 71 1 433 541 361 470 6.37e-14 75.1
MS.gene50823.t1 AT3G61240 34.545 110 71 1 433 541 361 470 6.37e-14 75.1
MS.gene50823.t1 AT1G16280 30.275 218 136 7 343 558 223 426 7.12e-14 74.7
MS.gene50823.t1 AT3G06980 27.568 185 118 4 356 528 560 740 3.26e-13 73.2
MS.gene50823.t1 AT2G07750 28.492 179 116 4 101 274 388 559 6.29e-13 72.4
MS.gene50823.t1 AT3G02065 29.187 209 132 8 77 281 99 295 7.73e-13 71.6
MS.gene50823.t1 AT3G02065 29.187 209 132 8 77 281 99 295 7.73e-13 71.6
MS.gene50823.t1 AT3G09620 23.039 204 135 4 90 286 398 586 1.13e-12 71.6
MS.gene50823.t1 AT3G09620 23.039 204 135 4 90 286 399 587 1.18e-12 71.6
MS.gene50823.t1 AT3G01540 27.723 202 128 6 88 286 158 344 1.99e-12 70.5
MS.gene50823.t1 AT3G01540 27.723 202 128 6 88 286 158 344 1.99e-12 70.5
MS.gene50823.t1 AT3G01540 27.723 202 128 6 88 286 158 344 1.99e-12 70.5
MS.gene50823.t1 AT3G01540 28.723 188 116 6 88 272 158 330 2.02e-12 70.5
MS.gene50823.t1 AT5G63120 26.425 193 125 4 102 291 179 357 2.23e-12 70.1
MS.gene50823.t1 AT5G63120 26.425 193 125 4 102 291 179 357 2.40e-12 70.1
MS.gene50823.t1 AT5G63120 26.425 193 125 4 102 291 179 357 2.40e-12 70.1
MS.gene50823.t1 AT5G63120 26.425 193 125 4 102 291 179 357 2.40e-12 70.1
MS.gene50823.t1 AT1G63250 28.492 179 116 4 101 274 341 512 2.63e-12 70.5
MS.gene50823.t1 AT5G14610 27.919 197 120 5 100 291 241 420 3.57e-12 69.7
MS.gene50823.t1 AT5G14610 28.421 190 114 5 107 291 49 221 5.09e-12 68.9
MS.gene50823.t1 AT5G14610 28.421 190 114 5 107 291 49 221 5.09e-12 68.9
MS.gene50823.t1 AT1G20920 22.500 200 141 4 90 286 193 381 2.64e-11 67.0
MS.gene50823.t1 AT3G06480 35.514 107 67 2 435 540 682 787 2.91e-11 67.0
MS.gene50823.t1 AT1G20920 21.762 193 129 4 90 275 531 708 3.15e-11 67.0
MS.gene50823.t1 AT1G20920 21.762 193 129 4 90 275 531 708 3.15e-11 67.0
MS.gene50823.t1 AT1G20920 21.762 193 129 4 90 275 531 708 3.15e-11 67.0
MS.gene50823.t1 AT1G20920 21.762 193 129 4 90 275 531 708 3.15e-11 67.0
MS.gene50823.t1 AT1G20920 21.762 193 129 4 90 275 531 708 3.15e-11 67.0
MS.gene50823.t1 AT1G20920 21.762 193 129 4 90 275 531 708 3.15e-11 67.0
MS.gene50823.t1 AT3G22330 35.484 93 59 1 458 549 373 465 3.61e-11 66.6
MS.gene50823.t1 AT1G71370 29.255 188 110 6 95 274 23 195 4.72e-11 65.9
MS.gene50823.t1 AT2G47330 25.243 206 127 6 89 286 229 415 7.13e-11 65.9
MS.gene50823.t1 AT5G26742 37.607 117 69 3 435 549 353 467 7.98e-11 65.5
MS.gene50823.t1 AT5G26742 37.607 117 69 3 435 549 353 467 7.98e-11 65.5
MS.gene50823.t1 AT1G71280 28.649 185 107 6 95 274 24 188 8.33e-11 65.1
MS.gene50823.t1 AT5G51280 30.556 108 74 1 436 542 400 507 8.40e-11 65.5
MS.gene50823.t1 AT1G28180 32.000 125 83 2 427 549 211 335 9.07e-11 64.3
MS.gene50823.t1 AT3G06480 27.830 212 125 8 88 291 435 626 9.27e-11 65.5

Find 121 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGCTTCGTTATTAATAT+TGG 0.230748 3.4:+833565 None:intergenic
AAATCGGAAGATTTGGATAA+TGG 0.257182 3.4:-832140 MS.gene50823:CDS
TCAGGCGGATTACTTTATTC+TGG 0.310873 3.4:+833759 None:intergenic
GTGAAGATATTGGGCTATGC+TGG 0.320318 3.4:-832059 MS.gene50823:CDS
CAGTTTAAAATCGGAAGATT+TGG 0.325357 3.4:-832147 MS.gene50823:CDS
GGGTACCGAGGAACATTCTT+TGG 0.339218 3.4:-834398 MS.gene50823:CDS
TGAAGCTGTGGTGAAGATAT+TGG 0.342460 3.4:-832069 MS.gene50823:CDS
TGGACCAGGGATGGCCAATT+CGG 0.344742 3.4:-834035 MS.gene50823:intron
AAATGTCTCTCATGTTATTC+AGG 0.347538 3.4:-831910 MS.gene50823:intron
TCTATACCATCTGTGTTGTC+AGG 0.367531 3.4:-834499 MS.gene50823:CDS
CAATACACCCTCTCTCGTTC+AGG 0.382589 3.4:-835132 MS.gene50823:intron
ATGATATCAGGTTCCCGAAT+TGG 0.387726 3.4:+834021 None:intergenic
CACAAGTGAAAGAGCTCATA+AGG 0.389324 3.4:-832181 MS.gene50823:CDS
GTAGATGCTGTTCGTCGTGC+AGG 0.390681 3.4:-830264 MS.gene50823:CDS
GAGAGAAGAAGAGAAATTGA+TGG 0.392917 3.4:+835399 None:intergenic
GGACCAGGGATGGCCAATTC+GGG 0.395111 3.4:-834034 MS.gene50823:intron
CCTGATGCTGAGTGGGTTAG+TGG 0.398187 3.4:-833407 MS.gene50823:CDS
TGCTCACACAATTGCACATT+CGG 0.402499 3.4:+834316 None:intergenic
AACGTTTCGTGGAGTTCAAT+TGG 0.403977 3.4:-835197 MS.gene50823:CDS
CAGCAGACACAGCCCTTTGT+TGG 0.404616 3.4:-835275 MS.gene50823:CDS
CACTACCTGTTTCCCACAAA+TGG 0.406579 3.4:+834231 None:intergenic
TGCAGCCATTTGTGGGAAAC+AGG 0.410751 3.4:-834236 MS.gene50823:intron
TGCTGGTAACTAGTCCGATT+TGG 0.414486 3.4:+830313 None:intergenic
CATAGCGGAGCAAGTTAATC+AGG 0.424888 3.4:+833741 None:intergenic
AAGAGAAGACGAAGATAAAG+TGG 0.425736 3.4:+835349 None:intergenic
TTAGTTGATTTCTACGACAA+AGG 0.431692 3.4:-831981 MS.gene50823:CDS
TTTCCAGATTGAAGCAAAGA+TGG 0.439295 3.4:-832223 MS.gene50823:intron
TGAATAACATGAGAGACATT+TGG 0.442425 3.4:+831912 None:intergenic
TCGTCTGACATGGCTTCAAT+TGG 0.443242 3.4:+833614 None:intergenic
GTTCGTCGTGCAGGGGAACT+CGG 0.444099 3.4:-830255 MS.gene50823:CDS
TACAAGCTCTCTGTTGGATT+CGG 0.447095 3.4:+830284 None:intergenic
CCACTAACCCACTCAGCATC+AGG 0.455201 3.4:+833407 None:intergenic
TGTGAATCACAGTTTAAAAT+CGG 0.456195 3.4:-832156 MS.gene50823:CDS
TTGCTGAAGATAACGTTTCG+TGG 0.460674 3.4:-835208 MS.gene50823:CDS
TGCAGGAGACCGCATTTAGC+AGG 0.463069 3.4:-829989 MS.gene50823:intron
ATTGTAATCTTCTGATGAAA+CGG 0.467873 3.4:+835247 None:intergenic
GTTAGTGCTGCAGCCATTTG+TGG 0.471920 3.4:-834244 MS.gene50823:CDS
GAAGCTGTGGTGAAGATATT+GGG 0.484895 3.4:-832068 MS.gene50823:CDS
ACAGCTAGAGCTGGCCAAAT+CGG 0.486615 3.4:-830327 MS.gene50823:CDS
AGAAATGACCTGAACGAGAG+AGG 0.490122 3.4:+835124 None:intergenic
TCTGCTGTGTTTGACGTGGA+AGG 0.490250 3.4:+835291 None:intergenic
AGCATCTACAAGCTCTCTGT+TGG 0.491017 3.4:+830278 None:intergenic
AATTGTGTGAGCAGGTAGTT+AGG 0.493726 3.4:-834306 MS.gene50823:CDS
TATTAGAGAGAGCTCGAGAA+AGG 0.494225 3.4:+835162 None:intergenic
GAATTGCACGTTGGATGAGC+GGG 0.497408 3.4:-832012 MS.gene50823:CDS
TAGATGCTGTTCGTCGTGCA+GGG 0.499759 3.4:-830263 MS.gene50823:CDS
GGTGTTGTCACAATGATATC+AGG 0.504804 3.4:+834009 None:intergenic
GCAGCTACACTTCCGGTGAA+TGG 0.505831 3.4:-833467 MS.gene50823:CDS
CGCTGTAAGACTCTCTTCAA+TGG 0.506284 3.4:+829437 None:intergenic
AAGCACGAGCAGAACTCTCC+TGG 0.509002 3.4:+834342 None:intergenic
TGAAGATATTGGGCTATGCT+GGG 0.514289 3.4:-832058 MS.gene50823:CDS
CGTTGATAGAAGACGCCGCA+TGG 0.515325 3.4:-833962 MS.gene50823:CDS
GTAGTTATTGCTGCAGAGAC+CGG 0.517794 3.4:-834469 MS.gene50823:CDS
TCAAGAAAACAAGAAGAGAC+TGG 0.518017 3.4:-833538 MS.gene50823:CDS
TCCTCTCATTGATAAGCTGA+GGG 0.520061 3.4:-834419 MS.gene50823:CDS
AAGAAGTCTCTCCGCCGGCC+AGG 0.524452 3.4:-834360 MS.gene50823:CDS
CTCTTTCACTTGTGTATCAA+CGG 0.530314 3.4:+832190 None:intergenic
TATGCATGGTGTTAAATATG+TGG 0.531983 3.4:-833935 MS.gene50823:intron
AAAGAAGATTCCGATGTCAC+TGG 0.536633 3.4:+833674 None:intergenic
ATCTTCATTGTCACAATCCA+AGG 0.537346 3.4:-833379 MS.gene50823:intron
GTGAATGGAAAGAAAACAGC+GGG 0.540547 3.4:-833452 MS.gene50823:CDS
GTTGGATTCGGTATACATGC+TGG 0.545852 3.4:+830296 None:intergenic
AGAAATTGATGGTAGCGAAT+CGG 0.548812 3.4:+835410 None:intergenic
TGAAACGGCGCTTCCAACAA+AGG 0.551644 3.4:+835262 None:intergenic
TGATGCAGCTGCTCGTGGCG+TGG 0.557135 3.4:-831940 MS.gene50823:CDS
ACATGATTGAGAAGAGCAGC+AGG 0.557430 3.4:+833988 None:intergenic
TTCAACAGCCTCAACTGTGT+TGG 0.557717 3.4:+832088 None:intergenic
AGAGAAGACGAAGATAAAGT+GGG 0.558542 3.4:+835350 None:intergenic
GAAATGACCTGAACGAGAGA+GGG 0.559297 3.4:+835125 None:intergenic
ATCAGAGTTGCCAGTGACAT+CGG 0.560123 3.4:-833684 MS.gene50823:CDS
ACCATCTGTGTTGTCAGGGA+AGG 0.560442 3.4:-834494 MS.gene50823:CDS
CTATACCATCTGTGTTGTCA+GGG 0.560940 3.4:-834498 MS.gene50823:CDS
CTGCTGTGTTTGACGTGGAA+GGG 0.561981 3.4:+835292 None:intergenic
TTAGTGCTGCAGCCATTTGT+GGG 0.562083 3.4:-834243 MS.gene50823:CDS
GAAACGGCGCTTCCAACAAA+GGG 0.565869 3.4:+835263 None:intergenic
TTCCTCTCATTGATAAGCTG+AGG 0.566977 3.4:-834420 MS.gene50823:CDS
ACAAGTGAAAGAGCTCATAA+GGG 0.567146 3.4:-832180 MS.gene50823:CDS
ATTAGAGAGAGCTCGAGAAA+GGG 0.568016 3.4:+835163 None:intergenic
ATCATCCTCCTCGTCTGACA+TGG 0.569854 3.4:+833604 None:intergenic
ATTGCTGCAGAGACCGGCAG+TGG 0.572069 3.4:-834463 MS.gene50823:CDS
ACTGTATGTCTTACCACTGC+CGG 0.574756 3.4:+834450 None:intergenic
GAAGATTTGGATAATGGTGG+TGG 0.580546 3.4:-832134 MS.gene50823:CDS
GTGTGAGCAGGTAGTTAGGA+TGG 0.586604 3.4:-834302 MS.gene50823:CDS
AGCAGAACTCTCCTGGCCGG+CGG 0.588505 3.4:+834349 None:intergenic
CGCCGCATGGAATTTATGCA+TGG 0.588650 3.4:-833949 MS.gene50823:CDS
TGATAAAGAAGTCTCTCCGC+CGG 0.597198 3.4:-834365 MS.gene50823:CDS
CATGTTTCCTGATGCTGAGT+GGG 0.603761 3.4:-833414 MS.gene50823:CDS
TTGTCGCATGATGCTTCAGA+AGG 0.608090 3.4:-833650 MS.gene50823:CDS
CCCCTCAGCTTATCAATGAG+AGG 0.609403 3.4:+834418 None:intergenic
TCGGAAGATTTGGATAATGG+TGG 0.610027 3.4:-832137 MS.gene50823:CDS
TGTACTGATGCAGCTGCTCG+TGG 0.611822 3.4:-831945 MS.gene50823:CDS
AACATCCAAAGAATGTTCCT+CGG 0.612515 3.4:+834393 None:intergenic
TGAAGCCATGTCAGACGAGG+AGG 0.613709 3.4:-833609 MS.gene50823:CDS
ATTGGTCGTACAGCTAGAGC+TGG 0.616027 3.4:-830336 MS.gene50823:CDS
AGAATTGCACGTTGGATGAG+CGG 0.619703 3.4:-832013 MS.gene50823:CDS
TCCTTCCCTGACAACACAGA+TGG 0.620342 3.4:+834493 None:intergenic
GAATGTGCAATTGTGTGAGC+AGG 0.621794 3.4:-834314 MS.gene50823:CDS
AAGCTGATATGCTTCTCTGT+GGG 0.625330 3.4:-833787 MS.gene50823:CDS
TGATGCTTCAGAAGGTGAAG+AGG 0.626535 3.4:-833642 MS.gene50823:CDS
AATGGCTGCAGCACTAACAA+TGG 0.628494 3.4:+834249 None:intergenic
ACGAGCAGAACTCTCCTGGC+CGG 0.632890 3.4:+834346 None:intergenic
GTTGATTTCTACGACAAAGG+TGG 0.637199 3.4:-831978 MS.gene50823:CDS
CGAGGAGGATGATGATAACG+AGG 0.644815 3.4:-833594 MS.gene50823:CDS
AGATGCTGTTCGTCGTGCAG+GGG 0.648856 3.4:-830262 MS.gene50823:CDS
AATTGAAGCCATGTCAGACG+AGG 0.652612 3.4:-833612 MS.gene50823:CDS
TGATAAGCTGAGGGGTACCG+AGG 0.652680 3.4:-834410 MS.gene50823:CDS
GTTTCATCAGAAGATTACAA+TGG 0.662414 3.4:-835245 MS.gene50823:CDS
AGGGGAACTCGGTCTACCTG+TGG 0.664526 3.4:-830244 MS.gene50823:intron
AGCGGAGCAAGTTAATCAGG+CGG 0.667625 3.4:+833744 None:intergenic
GAAGAGACTGGAGAAGAGTG+AGG 0.668144 3.4:-833526 MS.gene50823:CDS
TGTGTCTGCTGTGTTTGACG+TGG 0.669758 3.4:+835287 None:intergenic
AGTTGAGGCTGTTGAAGCTG+TGG 0.675682 3.4:-832081 MS.gene50823:CDS
TTATCATAAGAATTGCACGT+TGG 0.677936 3.4:-832021 MS.gene50823:CDS
GAAGCTGATATGCTTCTCTG+TGG 0.683524 3.4:-833788 MS.gene50823:CDS
ACATGTTTCCTGATGCTGAG+TGG 0.696080 3.4:-833415 MS.gene50823:CDS
CACCATGCATAAATTCCATG+CGG 0.706774 3.4:+833947 None:intergenic
AGGATGGCTAATAGTCTCTG+TGG 0.708474 3.4:-834286 MS.gene50823:CDS
GGTGTTTGCCAACACAGTTG+AGG 0.709075 3.4:-832096 MS.gene50823:CDS
TGGTGGCATTCATAGAACAA+TGG 0.741830 3.4:-832117 MS.gene50823:CDS
CCTCTCATTGATAAGCTGAG+GGG 0.743401 3.4:-834418 MS.gene50823:CDS
GGTGAATGGAAAGAAAACAG+CGG 0.768400 3.4:-833453 MS.gene50823:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAACATACATAAAT+AGG + chr3.4:831053-831072 None:intergenic 10.0%
!! AATTATAAAACTGTATTTAT+TGG - chr3.4:834670-834689 MS.gene50823:intron 10.0%
!! ATCAAAAAATATTTATACAT+TGG - chr3.4:834745-834764 MS.gene50823:intron 10.0%
!! TCAAAAAATATTTATACATT+GGG - chr3.4:834746-834765 MS.gene50823:intron 10.0%
!!! TAAATTTTGTAATTAATCAA+CGG + chr3.4:834108-834127 None:intergenic 10.0%
!!! TATATTTTCTAATTTCTAAT+TGG - chr3.4:831066-831085 MS.gene50823:intron 10.0%
!!! TTATATTTTTTTTTTTACCT+TGG - chr3.4:835191-835210 MS.gene50823:CDS 10.0%
!!! TTTTATTTTTATATAACCTT+AGG - chr3.4:834436-834455 MS.gene50823:CDS 10.0%
!!! TTTTTTTAACTAATTGAAAA+TGG - chr3.4:829879-829898 MS.gene50823:intron 10.0%
!! ATAAGCAAATTAATACAATA+AGG + chr3.4:830164-830183 None:intergenic 15.0%
!! ATAATAAAATATAACACCTA+AGG + chr3.4:834455-834474 None:intergenic 15.0%
!! ATGTAATATACATTATTTCA+TGG - chr3.4:834248-834267 MS.gene50823:CDS 15.0%
!! TAATTAAACTTATAGGAATT+AGG - chr3.4:833326-833345 MS.gene50823:intron 15.0%
!! TATAACTTATAACATGTAAA+AGG + chr3.4:833014-833033 None:intergenic 15.0%
!! TTATAGTTATATGAAATTTG+TGG - chr3.4:830740-830759 MS.gene50823:intron 15.0%
!!! ATTGATAATAAGTACAAAAA+GGG + chr3.4:831549-831568 None:intergenic 15.0%
!!! TATTGATAATAAGTACAAAA+AGG + chr3.4:831550-831569 None:intergenic 15.0%
!!! TTTGTTTTTATTCTTCTATT+CGG - chr3.4:830311-830330 MS.gene50823:CDS 15.0%
!!! TTTTACATGTTATAAGTTAT+AGG - chr3.4:833013-833032 MS.gene50823:intron 15.0%
!!! TTTTTATTTTTAAAGCTCTA+TGG + chr3.4:834980-834999 None:intergenic 15.0%
!! AACTAATTGTATGCTAATAA+TGG + chr3.4:832268-832287 None:intergenic 20.0%
!! ACAAAAGTAAAATTGTTTGT+TGG - chr3.4:833709-833728 MS.gene50823:CDS 20.0%
!! ATATTACATAACATGATTTG+AGG + chr3.4:834237-834256 None:intergenic 20.0%
!! CAAAAGTAAAATTGTTTGTT+GGG - chr3.4:833710-833729 MS.gene50823:CDS 20.0%
!! GGATTCAATTAAAATAAGAA+CGG - chr3.4:833605-833624 MS.gene50823:CDS 20.0%
!! TAAAAAAACAGAAATATAGC+AGG + chr3.4:829811-829830 None:intergenic 20.0%
!! TATTATGCATTGAGTTAAAA+AGG - chr3.4:835068-835087 MS.gene50823:intron 20.0%
!! TCTATAAAAATGCACAAATT+CGG + chr3.4:833568-833587 None:intergenic 20.0%
!!! AAATCAAATTTAGAACATAC+AGG + chr3.4:829860-829879 None:intergenic 20.0%
!!! AATCAAATTTAGAACATACA+GGG + chr3.4:829859-829878 None:intergenic 20.0%
!!! ATTCAATTTTCTTTTCTACT+TGG - chr3.4:831574-831593 MS.gene50823:intron 20.0%
!!! CTTAAATTTTGAAAGTTCTT+GGG - chr3.4:833053-833072 MS.gene50823:intron 20.0%
!!! CTTTCTTTTTTATCTTGTTA+CGG + chr3.4:834937-834956 None:intergenic 20.0%
!!! GATTAGTTTTCATATTACTT+CGG - chr3.4:835225-835244 MS.gene50823:CDS 20.0%
!!! TAGACAATTTTCTTTGTAAT+TGG - chr3.4:833584-833603 MS.gene50823:CDS 20.0%
!!! TATTGATTTTTAAAGCTCTA+TGG + chr3.4:835031-835050 None:intergenic 20.0%
!!! TATTTTTTTTTTTACCTTGG+AGG - chr3.4:835194-835213 MS.gene50823:CDS 20.0%
!!! TTGATAATAAGTACAAAAAG+GGG + chr3.4:831548-831567 None:intergenic 20.0%
!!! TTTTCTAATTTCTAATTGGT+AGG - chr3.4:831070-831089 MS.gene50823:intron 20.0%
! AAATACAAAATGATGGTTAC+TGG + chr3.4:835398-835417 None:intergenic 25.0%
! AAGACATATGAACTTAACAT+TGG - chr3.4:831025-831044 MS.gene50823:intron 25.0%
! AATAGTAACCCCTATTTATA+AGG + chr3.4:835261-835280 None:intergenic 25.0%
! ACAAATCAAGAGAAATGATT+AGG + chr3.4:833805-833824 None:intergenic 25.0%
! AGAATAAAATAGAAAGAGTG+TGG + chr3.4:832380-832399 None:intergenic 25.0%
! AGAATTATTAGAAGAAGCAA+AGG + chr3.4:833890-833909 None:intergenic 25.0%
! ATTGTAATCTTCTGATGAAA+CGG + chr3.4:829645-829664 None:intergenic 25.0%
! CAAACATTACTAATTTACCA+AGG - chr3.4:831720-831739 MS.gene50823:intron 25.0%
! CAAATCAAGAGAAATGATTA+GGG + chr3.4:833804-833823 None:intergenic 25.0%
! CCTTAATTATAAACTCAATC+CGG - chr3.4:834081-834100 MS.gene50823:intron 25.0%
! CGGATTGAGTTTATAATTAA+GGG + chr3.4:834083-834102 None:intergenic 25.0%
! CGTAACAAGATAAAAAAGAA+AGG - chr3.4:834935-834954 MS.gene50823:intron 25.0%
! GGTAAGTTTAGATTATAACT+TGG - chr3.4:830252-830271 MS.gene50823:CDS 25.0%
! GTCTTGTATCCTTATAAATA+GGG - chr3.4:835249-835268 MS.gene50823:CDS 25.0%
! TAATTTACCAAGGTAAAAGA+TGG - chr3.4:831730-831749 MS.gene50823:intron 25.0%
! TCTTCTAATAATTCTTCAGA+CGG - chr3.4:833895-833914 MS.gene50823:intron 25.0%
! TCTTGTATCCTTATAAATAG+GGG - chr3.4:835250-835269 MS.gene50823:CDS 25.0%
! TGATAATAAGTACAAAAAGG+GGG + chr3.4:831547-831566 None:intergenic 25.0%
! TTAGTAGTTGTTAGTTAGAA+GGG + chr3.4:832427-832446 None:intergenic 25.0%
! TTCAAATATCTCAATGTGTA+TGG + chr3.4:834717-834736 None:intergenic 25.0%
! TTCAGCTTCGTTATTAATAT+TGG + chr3.4:831327-831346 None:intergenic 25.0%
! TTCATCTGTCTCAAAATAAT+AGG - chr3.4:832108-832127 MS.gene50823:CDS 25.0%
! TTCTTATACAAATACCACAT+AGG - chr3.4:832307-832326 MS.gene50823:intron 25.0%
! TTCTTCAATTTAAGTAAACC+TGG + chr3.4:831864-831883 None:intergenic 25.0%
! TTGCTACAAATACAAAATGA+TGG + chr3.4:835405-835424 None:intergenic 25.0%
!! AGTCTTGTATCCTTATAAAT+AGG - chr3.4:835248-835267 MS.gene50823:CDS 25.0%
!! ATATCAATGACTTGTATAGT+TGG + chr3.4:834838-834857 None:intergenic 25.0%
!! GTTTATAATTAAGGGTACAA+TGG + chr3.4:834075-834094 None:intergenic 25.0%
!! TGTGAATCACAGTTTAAAAT+CGG - chr3.4:832733-832752 MS.gene50823:intron 25.0%
!! TTTGATAGATTCCAACATTT+TGG - chr3.4:834857-834876 MS.gene50823:intron 25.0%
!!! AAATTTAAAAAGCACTTGCA+AGG - chr3.4:834121-834140 MS.gene50823:intron 25.0%
!!! ACAGTTTTATAATTTACCAC+AGG + chr3.4:834664-834683 None:intergenic 25.0%
!!! CATTTTGCAGTTTTATTTCT+GGG + chr3.4:833527-833546 None:intergenic 25.0%
!!! GCTTAAATTTTGAAAGTTCT+TGG - chr3.4:833052-833071 MS.gene50823:intron 25.0%
!!! TAAAAATCTTTTTTGGACCA+GGG - chr3.4:830841-830860 MS.gene50823:intron 25.0%
!!! TCAGCACTAAAAATCTTTTT+TGG - chr3.4:830834-830853 MS.gene50823:intron 25.0%
!!! TGATTAATTAGCTTTAGTCA+AGG - chr3.4:829909-829928 MS.gene50823:intron 25.0%
!!! TGATTGTTTTTCAGTTTGAA+TGG - chr3.4:831925-831944 MS.gene50823:CDS 25.0%
!!! TTACTCGGACTTTTTTTTAT+TGG - chr3.4:829977-829996 MS.gene50823:CDS 25.0%
!!! TTATTTCCTGATGCTATTTT+TGG - chr3.4:830703-830722 MS.gene50823:intron 25.0%
AAAACAGAAATATAGCAGGA+AGG + chr3.4:829807-829826 None:intergenic 30.0%
AAATCGGAAGATTTGGATAA+TGG - chr3.4:832749-832768 MS.gene50823:intron 30.0%
AAATGTCTCTCATGTTATTC+AGG - chr3.4:832979-832998 MS.gene50823:intron 30.0%
AAGAGTCACAATGTCATATA+GGG + chr3.4:834306-834325 None:intergenic 30.0%
AATGAAGTGACTCAAATAAG+AGG + chr3.4:834283-834302 None:intergenic 30.0%
AATGTTTATCAGTGTTTCTC+TGG - chr3.4:833765-833784 MS.gene50823:CDS 30.0%
ACTTGTGTCAAGAATGAAAT+TGG - chr3.4:830230-830249 MS.gene50823:intron 30.0%
AGATAACCAAAAATAGCATC+AGG + chr3.4:830712-830731 None:intergenic 30.0%
ATAAAAATGCACAAATTCGG+AGG + chr3.4:833565-833584 None:intergenic 30.0%
ATTGAAGATCTTTGGTGAAA+AGG + chr3.4:833850-833869 None:intergenic 30.0%
CACTCAAATTCACTGTTTAA+CGG - chr3.4:832354-832373 MS.gene50823:intron 30.0%
CCGGATTGAGTTTATAATTA+AGG + chr3.4:834084-834103 None:intergenic 30.0%
CTTGTGTCAAGAATGAAATT+GGG - chr3.4:830231-830250 MS.gene50823:intron 30.0%
GATTGTTACACTATTAATGC+AGG - chr3.4:834883-834902 MS.gene50823:intron 30.0%
GTTAAACAGTGAATTTGAGT+GGG + chr3.4:832355-832374 None:intergenic 30.0%
GTTAGTAGTTGTTAGTTAGA+AGG + chr3.4:832428-832447 None:intergenic 30.0%
GTTTCATCAGAAGATTACAA+TGG - chr3.4:829644-829663 MS.gene50823:intron 30.0%
TAACAATCACTCCAAAATGT+TGG + chr3.4:834871-834890 None:intergenic 30.0%
TAAGAGTCACAATGTCATAT+AGG + chr3.4:834307-834326 None:intergenic 30.0%
TATCATGTTTAAGTAGCGTT+TGG - chr3.4:834151-834170 MS.gene50823:intron 30.0%
TATTCATCTAAGTCTCTCAT+GGG + chr3.4:831793-831812 None:intergenic 30.0%
TCAAAGATGTTGTGCATATA+TGG + chr3.4:832547-832566 None:intergenic 30.0%
TGAATAACATGAGAGACATT+TGG + chr3.4:832980-832999 None:intergenic 30.0%
TGGGCAATAAATTCTAAACT+TGG + chr3.4:831774-831793 None:intergenic 30.0%
TGTGTTCGAAATAGAAAATG+CGG - chr3.4:835112-835131 MS.gene50823:intron 30.0%
TTATCATAAGAATTGCACGT+TGG - chr3.4:832868-832887 MS.gene50823:intron 30.0%
TTCCTCTTTACATGTCTAAT+GGG - chr3.4:832508-832527 MS.gene50823:intron 30.0%
TTGAAGATCTTTGGTGAAAA+GGG + chr3.4:833849-833868 None:intergenic 30.0%
TTGTAGTTATCAGTTTCAAG+TGG + chr3.4:830024-830043 None:intergenic 30.0%
TTTCCTCTTTACATGTCTAA+TGG - chr3.4:832507-832526 MS.gene50823:intron 30.0%
TTTGTAATTAATCAACGGTC+CGG + chr3.4:834103-834122 None:intergenic 30.0%
TTTGTTGGAACAACTTTACT+CGG - chr3.4:829962-829981 MS.gene50823:CDS 30.0%
! ACAAGAGTTTTTCATCATAG+CGG + chr3.4:831166-831185 None:intergenic 30.0%
! AGAAAAGGTGTAGTGTTAAT+TGG + chr3.4:833211-833230 None:intergenic 30.0%
! CAGTTTAAAATCGGAAGATT+TGG - chr3.4:832742-832761 MS.gene50823:intron 30.0%
! TATGCATGGTGTTAAATATG+TGG - chr3.4:830954-830973 MS.gene50823:intron 30.0%
! TCTCACTCCTTATTCTTTTT+CGG - chr3.4:832484-832503 MS.gene50823:intron 30.0%
! TGTCGTTTGTCAATCATTTA+AGG - chr3.4:833500-833519 MS.gene50823:CDS 30.0%
! TTAGTTGATTTCTACGACAA+AGG - chr3.4:832908-832927 MS.gene50823:intron 30.0%
! TTTATTGGCTGTAGTAATCT+TGG - chr3.4:834685-834704 MS.gene50823:intron 30.0%
!! ATGATGAGAGCATTAACTAT+AGG - chr3.4:834790-834809 MS.gene50823:intron 30.0%
!! GAATCGGTGAATTTTGAAAA+TGG + chr3.4:829466-829485 None:intergenic 30.0%
!! TAGTATGTCACTTTGTAACA+AGG - chr3.4:832198-832217 MS.gene50823:CDS 30.0%
!!! CTAAAAATCTTTTTTGGACC+AGG - chr3.4:830840-830859 MS.gene50823:intron 30.0%
!!! GCATTTTGCAGTTTTATTTC+TGG + chr3.4:833528-833547 None:intergenic 30.0%
AAACAGTACAGTTGAAAGCA+TGG + chr3.4:834403-834422 None:intergenic 35.0%
AAATGATTGACAAACGACAG+AGG + chr3.4:833499-833518 None:intergenic 35.0%
AACATCCAAAGAATGTTCCT+CGG + chr3.4:830499-830518 None:intergenic 35.0%
AAGAGAAGACGAAGATAAAG+TGG + chr3.4:829543-829562 None:intergenic 35.0%
AAGATCGCATTGAAGATCTT+TGG + chr3.4:833858-833877 None:intergenic 35.0%
AATGATTGACAAACGACAGA+GGG + chr3.4:833498-833517 None:intergenic 35.0%
ACAAGTGAAAGAGCTCATAA+GGG - chr3.4:832709-832728 MS.gene50823:intron 35.0%
ACAATGTCTTAGTTCAAACC+CGG - chr3.4:830040-830059 MS.gene50823:intron 35.0%
AGAGAAGACGAAGATAAAGT+GGG + chr3.4:829542-829561 None:intergenic 35.0%
AGAGACTTAGATGAATACCT+AGG - chr3.4:831796-831815 MS.gene50823:intron 35.0%
ATCTTCATTGTCACAATCCA+AGG - chr3.4:831510-831529 MS.gene50823:intron 35.0%
CACTTATGATCATACTTCCT+AGG + chr3.4:831816-831835 None:intergenic 35.0%
CAGTGATGCATGTATACATT+GGG - chr3.4:833400-833419 MS.gene50823:CDS 35.0%
CGTTAAACAGTGAATTTGAG+TGG + chr3.4:832356-832375 None:intergenic 35.0%
CTCTTTCACTTGTGTATCAA+CGG + chr3.4:832702-832721 None:intergenic 35.0%
GAAAAAGAATAAGGAGTGAG+AGG + chr3.4:832485-832504 None:intergenic 35.0%
GAACCAATTTCGAACTTTGT+TGG - chr3.4:829947-829966 MS.gene50823:intron 35.0%
GACTATGAAAGTAAGAGAGT+TGG + chr3.4:834355-834374 None:intergenic 35.0%
GAGAGAAGAAGAGAAATTGA+TGG + chr3.4:829493-829512 None:intergenic 35.0%
GAGGAAACCGAAAAAGAATA+AGG + chr3.4:832494-832513 None:intergenic 35.0%
GAGTGAGAGGAAATTAGTAA+AGG + chr3.4:832472-832491 None:intergenic 35.0%
GGATCTGTTTGACTAACTTA+AGG + chr3.4:831843-831862 None:intergenic 35.0%
GGTTGAGAACAAACAGAAAA+GGG - chr3.4:833074-833093 MS.gene50823:intron 35.0%
GGTTTACTACACTATATGTC+TGG - chr3.4:830761-830780 MS.gene50823:intron 35.0%
GTATTCATCTAAGTCTCTCA+TGG + chr3.4:831794-831813 None:intergenic 35.0%
GTTCCAACAAAGTTCGAAAT+TGG + chr3.4:829953-829972 None:intergenic 35.0%
TAAGTTAGTCAAACAGATCC+AGG - chr3.4:831843-831862 MS.gene50823:intron 35.0%
TACACACACAGAAGAAGAAA+TGG + chr3.4:830361-830380 None:intergenic 35.0%
TAGTCAAGGTTGAATTGATC+CGG - chr3.4:829923-829942 MS.gene50823:intron 35.0%
TATCCATCTTTGCTTCAATC+TGG + chr3.4:832672-832691 None:intergenic 35.0%
TATTGACAGTGCACAATCAA+TGG + chr3.4:831667-831686 None:intergenic 35.0%
TCAACTTCTGTCGTGAAATT+AGG - chr3.4:831600-831619 MS.gene50823:intron 35.0%
TCAAGAAAACAAGAAGAGAC+TGG - chr3.4:831351-831370 MS.gene50823:intron 35.0%
TCAGTGATGCATGTATACAT+TGG - chr3.4:833399-833418 MS.gene50823:CDS 35.0%
TGAAGATCTTTGGTGAAAAG+GGG + chr3.4:833848-833867 None:intergenic 35.0%
TTATCGTTGTCGAAGTTACA+AGG + chr3.4:835364-835383 None:intergenic 35.0%
TTCCCATTAGACATGTAAAG+AGG + chr3.4:832513-832532 None:intergenic 35.0%
TTGTTAGTTAGAAGGGTGAA+GGG + chr3.4:832420-832439 None:intergenic 35.0%
TTTCCAGATTGAAGCAAAGA+TGG - chr3.4:832666-832685 MS.gene50823:intron 35.0%
! AAAGTTCGAAATTGGTTCTC+CGG + chr3.4:829945-829964 None:intergenic 35.0%
! AGAAATTGATGGTAGCGAAT+CGG + chr3.4:829482-829501 None:intergenic 35.0%
! CAAAATGATGGTTACTGGTT+AGG + chr3.4:835393-835412 None:intergenic 35.0%
! CTAGGAAGTATGATCATAAG+TGG - chr3.4:831814-831833 MS.gene50823:intron 35.0%
! GTAGACTTTTTGCATAGGAT+TGG - chr3.4:834535-834554 MS.gene50823:intron 35.0%
! GTTCTTACCATCTTTTACCT+TGG + chr3.4:831740-831759 None:intergenic 35.0%
! TCAGTGGTCGTATATCTTTT+TGG - chr3.4:831638-831657 MS.gene50823:intron 35.0%
! TTTTCATGATCAGAGCTAGT+TGG - chr3.4:833659-833678 MS.gene50823:CDS 35.0%
!! AAGTCACAACTCTAAAACGA+TGG + chr3.4:830214-830233 None:intergenic 35.0%
AAAGAAGATTCCGATGTCAC+TGG + chr3.4:831218-831237 None:intergenic 40.0%
AACGTTTCGTGGAGTTCAAT+TGG - chr3.4:829692-829711 MS.gene50823:intron 40.0%
AAGAGAGTTGGATACATGCA+TGG + chr3.4:834343-834362 None:intergenic 40.0%
AAGCTGATATGCTTCTCTGT+GGG - chr3.4:831102-831121 MS.gene50823:intron 40.0%
AATTGTGTGAGCAGGTAGTT+AGG - chr3.4:830583-830602 MS.gene50823:intron 40.0%
AGCATTACGGACTTCTTACT+CGG - chr3.4:830104-830123 MS.gene50823:intron 40.0%
ATCTCCTACATAGGGAATAG+GGG - chr3.4:833354-833373 MS.gene50823:intron 40.0%
ATGATATCAGGTTCCCGAAT+TGG + chr3.4:830871-830890 None:intergenic 40.0%
ATTAGAGAGAGCTCGAGAAA+GGG + chr3.4:829729-829748 None:intergenic 40.0%
CAATGTCTTAGTTCAAACCC+GGG - chr3.4:830041-830060 MS.gene50823:intron 40.0%
CAATGTTGTGCATGTGTTTC+AGG - chr3.4:834492-834511 MS.gene50823:CDS 40.0%
CACAAGTGAAAGAGCTCATA+AGG - chr3.4:832708-832727 MS.gene50823:intron 40.0%
CACCATGCATAAATTCCATG+CGG + chr3.4:830945-830964 None:intergenic 40.0%
CATCTCCTACATAGGGAATA+GGG - chr3.4:833353-833372 MS.gene50823:intron 40.0%
CTAATCTTAGAGATCCTCCA+AGG + chr3.4:835211-835230 None:intergenic 40.0%
CTATACCATCTGTGTTGTCA+GGG - chr3.4:830391-830410 MS.gene50823:intron 40.0%
CTGTCGTGAAATTAGGAAAG+TGG - chr3.4:831607-831626 MS.gene50823:intron 40.0%
GAAGCTGTGGTGAAGATATT+GGG - chr3.4:832821-832840 MS.gene50823:intron 40.0%
GAAGGGAGACTATCAGTAAT+AGG + chr3.4:832403-832422 None:intergenic 40.0%
GAATGTTGATATTGCTAGGC+TGG + chr3.4:830076-830095 None:intergenic 40.0%
GGGTTGAGAACAAACAGAAA+AGG - chr3.4:833073-833092 MS.gene50823:intron 40.0%
GGTGAATGGAAAGAAAACAG+CGG - chr3.4:831436-831455 MS.gene50823:intron 40.0%
GTGAATGGAAAGAAAACAGC+GGG - chr3.4:831437-831456 MS.gene50823:intron 40.0%
GTTGTTAGTTAGAAGGGTGA+AGG + chr3.4:832421-832440 None:intergenic 40.0%
TAATGTGACAGGAATGTGTG+CGG - chr3.4:831685-831704 MS.gene50823:intron 40.0%
TACAAGCTCTCTGTTGGATT+CGG + chr3.4:834608-834627 None:intergenic 40.0%
TACATGCATCACTGAGCAAA+TGG + chr3.4:833394-833413 None:intergenic 40.0%
TATTAGAGAGAGCTCGAGAA+AGG + chr3.4:829730-829749 None:intergenic 40.0%
TCAATGTCCGCAAGTAGAAA+AGG + chr3.4:833226-833245 None:intergenic 40.0%
TCCTCTCATTGATAAGCTGA+GGG - chr3.4:830470-830489 MS.gene50823:intron 40.0%
TCGGGAATGTTGATATTGCT+AGG + chr3.4:830080-830099 None:intergenic 40.0%
TCTATACCATCTGTGTTGTC+AGG - chr3.4:830390-830409 MS.gene50823:intron 40.0%
TGAAGATATTGGGCTATGCT+GGG - chr3.4:832831-832850 MS.gene50823:intron 40.0%
TGAAGCTGTGGTGAAGATAT+TGG - chr3.4:832820-832839 MS.gene50823:intron 40.0%
TGAGAACAAACAGAAAAGGG+AGG - chr3.4:833077-833096 MS.gene50823:intron 40.0%
TGCACTGTCAATAATGTGAC+AGG - chr3.4:831674-831693 MS.gene50823:intron 40.0%
TGCTCACACAATTGCACATT+CGG + chr3.4:830576-830595 None:intergenic 40.0%
TGGAGAAGGGAAAGGAAATT+GGG - chr3.4:833929-833948 MS.gene50823:intron 40.0%
TGGTACTTGTCACTAGCATA+CGG + chr3.4:830004-830023 None:intergenic 40.0%
TGGTGGCATTCATAGAACAA+TGG - chr3.4:832772-832791 MS.gene50823:intron 40.0%
TTCCTCTCATTGATAAGCTG+AGG - chr3.4:830469-830488 MS.gene50823:intron 40.0%
TTCTTCTTCTGTGTGTGTAC+AGG - chr3.4:830362-830381 MS.gene50823:CDS 40.0%
TTGCTGAAGATAACGTTTCG+TGG - chr3.4:829681-829700 MS.gene50823:intron 40.0%
! CACTACACCTTTTCTACTTG+CGG - chr3.4:833216-833235 MS.gene50823:intron 40.0%
! CTGCTGTAGACTTTTTGCAT+AGG - chr3.4:834530-834549 MS.gene50823:intron 40.0%
! GAAGATTTGGATAATGGTGG+TGG - chr3.4:832755-832774 MS.gene50823:intron 40.0%
! GCTTCTTTTCCTGCTAAATG+CGG + chr3.4:834912-834931 None:intergenic 40.0%
! GGTGTTGTCACAATGATATC+AGG + chr3.4:830883-830902 None:intergenic 40.0%
! GTGGTCGTATATCTTTTTGG+TGG - chr3.4:831641-831660 MS.gene50823:intron 40.0%
! GTTGATTTCTACGACAAAGG+TGG - chr3.4:832911-832930 MS.gene50823:intron 40.0%
! GTTTGGTAACTTTCACACGA+TGG - chr3.4:834168-834187 MS.gene50823:intron 40.0%
! TCGGAAGATTTGGATAATGG+TGG - chr3.4:832752-832771 MS.gene50823:intron 40.0%
! TTTTGTTGCAGCTACACTTC+CGG - chr3.4:831415-831434 MS.gene50823:intron 40.0%
!! AGGAAAGCATCTCCTACATA+GGG - chr3.4:833346-833365 MS.gene50823:intron 40.0%
!! CACAACTCTAAAACGATGGT+TGG + chr3.4:830210-830229 None:intergenic 40.0%
!! GCTGTTTTCTTTCCATTCAC+CGG + chr3.4:831437-831456 None:intergenic 40.0%
!! TAGGAAAGCATCTCCTACAT+AGG - chr3.4:833345-833364 MS.gene50823:intron 40.0%
!! TCAGGCGGATTACTTTATTC+TGG + chr3.4:831133-831152 None:intergenic 40.0%
!!! AATCTTTTTTGGACCAGGGA+TGG - chr3.4:830845-830864 MS.gene50823:intron 40.0%
AAACCTGCTTCTTTCGCTCA+CGG + chr3.4:833633-833652 None:intergenic 45.0%
AACTCCCCTATTCCCTATGT+AGG + chr3.4:833361-833380 None:intergenic 45.0%
AAGTCCGTAATGCTTAGCTC+GGG + chr3.4:830098-830117 None:intergenic 45.0%
AATACCACATAGGCAGTTCG+AGG - chr3.4:832317-832336 MS.gene50823:intron 45.0%
AATGGCTGCAGCACTAACAA+TGG + chr3.4:830643-830662 None:intergenic 45.0%
AATTGAAGCCATGTCAGACG+AGG - chr3.4:831277-831296 MS.gene50823:intron 45.0%
ACATGATTGAGAAGAGCAGC+AGG + chr3.4:830904-830923 None:intergenic 45.0%
ACATGTTTCCTGATGCTGAG+TGG - chr3.4:831474-831493 MS.gene50823:intron 45.0%
ACTGTATGTCTTACCACTGC+CGG + chr3.4:830442-830461 None:intergenic 45.0%
AGAAATGACCTGAACGAGAG+AGG + chr3.4:829768-829787 None:intergenic 45.0%
AGAATTGCACGTTGGATGAG+CGG - chr3.4:832876-832895 MS.gene50823:intron 45.0%
AGCATCTACAAGCTCTCTGT+TGG + chr3.4:834614-834633 None:intergenic 45.0%
AGGATGGCTAATAGTCTCTG+TGG - chr3.4:830603-830622 MS.gene50823:intron 45.0%
AGGGGGAAAATATAGCACCT+TGG + chr3.4:831530-831549 None:intergenic 45.0%
ATCACTGAGCAAATGGTGCA+CGG + chr3.4:833387-833406 None:intergenic 45.0%
ATCAGAGTTGCCAGTGACAT+CGG - chr3.4:831205-831224 MS.gene50823:intron 45.0%
ATTTCCTTTCCCTTCTCCAC+TGG + chr3.4:833928-833947 None:intergenic 45.0%
CACTACCTGTTTCCCACAAA+TGG + chr3.4:830661-830680 None:intergenic 45.0%
CATGTTTCCTGATGCTGAGT+GGG - chr3.4:831475-831494 MS.gene50823:intron 45.0%
CATTCCCGAGCTAAGCATTA+CGG - chr3.4:830091-830110 MS.gene50823:intron 45.0%
CCTCTCATTGATAAGCTGAG+GGG - chr3.4:830471-830490 MS.gene50823:intron 45.0%
CGCTGTAAGACTCTCTTCAA+TGG + chr3.4:835455-835474 None:intergenic 45.0%
GAAATGACCTGAACGAGAGA+GGG + chr3.4:829767-829786 None:intergenic 45.0%
GAAGCTGATATGCTTCTCTG+TGG - chr3.4:831101-831120 MS.gene50823:intron 45.0%
GAAGTCCGTAATGCTTAGCT+CGG + chr3.4:830099-830118 None:intergenic 45.0%
GAATGTGCAATTGTGTGAGC+AGG - chr3.4:830575-830594 MS.gene50823:intron 45.0%
GCATCTCCTACATAGGGAAT+AGG - chr3.4:833352-833371 MS.gene50823:intron 45.0%
GCGAAAGAAGCAGGTTTCTA+TGG - chr3.4:833636-833655 MS.gene50823:CDS 45.0%
GGAGAAGGGAAAGGAAATTG+GGG - chr3.4:833930-833949 MS.gene50823:intron 45.0%
GTAGTTATTGCTGCAGAGAC+CGG - chr3.4:830420-830439 MS.gene50823:intron 45.0%
GTGAAGATATTGGGCTATGC+TGG - chr3.4:832830-832849 MS.gene50823:intron 45.0%
GTGGAGAAGGGAAAGGAAAT+TGG - chr3.4:833928-833947 MS.gene50823:intron 45.0%
TACGCATCATGCTTGTACAG+AGG - chr3.4:833966-833985 MS.gene50823:CDS 45.0%
TCGTCTGACATGGCTTCAAT+TGG + chr3.4:831278-831297 None:intergenic 45.0%
TGATAAAGAAGTCTCTCCGC+CGG - chr3.4:830524-830543 MS.gene50823:intron 45.0%
TGATGCTTCAGAAGGTGAAG+AGG - chr3.4:831247-831266 MS.gene50823:intron 45.0%
TGCTGGTAACTAGTCCGATT+TGG + chr3.4:834579-834598 None:intergenic 45.0%
TTAGTGCTGCAGCCATTTGT+GGG - chr3.4:830646-830665 MS.gene50823:intron 45.0%
TTCAACAGCCTCAACTGTGT+TGG + chr3.4:832804-832823 None:intergenic 45.0%
TTCTTCTATTCGGACTGCTG+AGG - chr3.4:830321-830340 MS.gene50823:CDS 45.0%
TTGTCGCATGATGCTTCAGA+AGG - chr3.4:831239-831258 MS.gene50823:intron 45.0%
TTGTGATATCCAACCCATCC+CGG - chr3.4:832578-832597 MS.gene50823:intron 45.0%
! ACACTGTTTTCCAGTAGAGC+CGG + chr3.4:832600-832619 None:intergenic 45.0%
! CATAGCGGAGCAAGTTAATC+AGG + chr3.4:831151-831170 None:intergenic 45.0%
! GTTGGATTCGGTATACATGC+TGG + chr3.4:834596-834615 None:intergenic 45.0%
! TCACACGATGGTCTCTCTTT+TGG - chr3.4:834180-834199 MS.gene50823:intron 45.0%
!! AAGTTTAATTATAAAAATAT+GGG + chr3.4:833317-833336 None:intergenic 5.0%
!! TAAGTTTAATTATAAAAATA+TGG + chr3.4:833318-833337 None:intergenic 5.0%
!!! ATTTTTATAATTAAACTTAT+AGG - chr3.4:833319-833338 MS.gene50823:intron 5.0%
!!! TGTTTTAAATAATAATAAAA+AGG + chr3.4:833692-833711 None:intergenic 5.0%
AAACGACAGAGGGTGGTGAA+GGG + chr3.4:833488-833507 None:intergenic 50.0%
ACAGCTAGAGCTGGCCAAAT+CGG - chr3.4:834562-834581 MS.gene50823:intron 50.0%
ACCATCTGTGTTGTCAGGGA+AGG - chr3.4:830395-830414 MS.gene50823:intron 50.0%
AGCACGGATGGATGATTGAG+GGG - chr3.4:834000-834019 MS.gene50823:CDS 50.0%
AGCGGAGCAAGTTAATCAGG+CGG + chr3.4:831148-831167 None:intergenic 50.0%
AGGGAAAGGAAATTGGGGAG+TGG - chr3.4:833935-833954 MS.gene50823:intron 50.0%
AGTTCCTCGAACTGCCTATG+TGG + chr3.4:832324-832343 None:intergenic 50.0%
AGTTGAGGCTGTTGAAGCTG+TGG - chr3.4:832808-832827 MS.gene50823:intron 50.0%
AGTTGTGGTTGTGGGAGAGA+TGG - chr3.4:834029-834048 MS.gene50823:CDS 50.0%
ATCATCCTCCTCGTCTGACA+TGG + chr3.4:831288-831307 None:intergenic 50.0%
ATCATGCTTGTACAGAGGCG+AGG - chr3.4:833971-833990 MS.gene50823:CDS 50.0%
ATTGAGGGGAGATGGAGTTG+TGG - chr3.4:834014-834033 MS.gene50823:CDS 50.0%
ATTGGTCGTACAGCTAGAGC+TGG - chr3.4:834553-834572 MS.gene50823:intron 50.0%
CAATACACCCTCTCTCGTTC+AGG - chr3.4:829757-829776 MS.gene50823:intron 50.0%
CAGCACGGATGGATGATTGA+GGG - chr3.4:833999-834018 MS.gene50823:CDS 50.0%
CCCCTCAGCTTATCAATGAG+AGG + chr3.4:830474-830493 None:intergenic 50.0%
CGCCGCATGGAATTTATGCA+TGG - chr3.4:830940-830959 MS.gene50823:intron 50.0%
CTGCTGTGTTTGACGTGGAA+GGG + chr3.4:829600-829619 None:intergenic 50.0%
GAAACGGCGCTTCCAACAAA+GGG + chr3.4:829629-829648 None:intergenic 50.0%
GAAAGTGGTCAGTGCATCAG+TGG - chr3.4:831622-831641 MS.gene50823:intron 50.0%
GAAGAGACTGGAGAAGAGTG+AGG - chr3.4:831363-831382 MS.gene50823:intron 50.0%
GAATTGCACGTTGGATGAGC+GGG - chr3.4:832877-832896 MS.gene50823:intron 50.0%
GATGGATGATTGAGGGGAGA+TGG - chr3.4:834006-834025 MS.gene50823:CDS 50.0%
GATTGACAAACGACAGAGGG+TGG + chr3.4:833495-833514 None:intergenic 50.0%
GGAGATGGAGTTGTGGTTGT+GGG - chr3.4:834021-834040 MS.gene50823:CDS 50.0%
GGTGTTTGCCAACACAGTTG+AGG - chr3.4:832793-832812 MS.gene50823:intron 50.0%
GTGTGAGCAGGTAGTTAGGA+TGG - chr3.4:830587-830606 MS.gene50823:intron 50.0%
GTTAGTGCTGCAGCCATTTG+TGG - chr3.4:830645-830664 MS.gene50823:intron 50.0%
GTTGTGGTTGTGGGAGAGAT+GGG - chr3.4:834030-834049 MS.gene50823:CDS 50.0%
TAGATGCTGTTCGTCGTGCA+GGG - chr3.4:834626-834645 MS.gene50823:intron 50.0%
TCACTGAGCAAATGGTGCAC+GGG + chr3.4:833386-833405 None:intergenic 50.0%
TCCTTCCCTGACAACACAGA+TGG + chr3.4:830399-830418 None:intergenic 50.0%
TCTGCTGTGTTTGACGTGGA+AGG + chr3.4:829601-829620 None:intergenic 50.0%
TGAAACGGCGCTTCCAACAA+AGG + chr3.4:829630-829649 None:intergenic 50.0%
TGCAGCCATTTGTGGGAAAC+AGG - chr3.4:830653-830672 MS.gene50823:intron 50.0%
TGTGTCTGCTGTGTTTGACG+TGG + chr3.4:829605-829624 None:intergenic 50.0%
! CACTGTTTTCCAGTAGAGCC+GGG + chr3.4:832599-832618 None:intergenic 50.0%
! CGAGGAGGATGATGATAACG+AGG - chr3.4:831295-831314 MS.gene50823:intron 50.0%
! CTAGGCTGGACACTTTTACC+CGG + chr3.4:830062-830081 None:intergenic 50.0%
! TAGGCTGGACACTTTTACCC+GGG + chr3.4:830061-830080 None:intergenic 50.0%
! TGGTTAGCTCTCGACACTCA+AGG + chr3.4:832248-832267 None:intergenic 50.0%
! TTAGCTCTCGACACTCAAGG+TGG + chr3.4:832245-832264 None:intergenic 50.0%
! TTTTCCAGTAGAGCCGGGAT+GGG + chr3.4:832594-832613 None:intergenic 50.0%
!! GGGTACCGAGGAACATTCTT+TGG - chr3.4:830491-830510 MS.gene50823:intron 50.0%
AAGCACGAGCAGAACTCTCC+TGG + chr3.4:830550-830569 None:intergenic 55.0%
ACAGAGGGTGGTGAAGGGAA+TGG + chr3.4:833483-833502 None:intergenic 55.0%
AGAGCTGGGGAAGGAGTTAG+TGG + chr3.4:833449-833468 None:intergenic 55.0%
AGATGCTGTTCGTCGTGCAG+GGG - chr3.4:834627-834646 MS.gene50823:intron 55.0%
CAAACGACAGAGGGTGGTGA+AGG + chr3.4:833489-833508 None:intergenic 55.0%
CAGCAGACACAGCCCTTTGT+TGG - chr3.4:829614-829633 MS.gene50823:intron 55.0%
CCACTAACCCACTCAGCATC+AGG + chr3.4:831485-831504 None:intergenic 55.0%
GCAGCACGGATGGATGATTG+AGG - chr3.4:833998-834017 MS.gene50823:CDS 55.0%
GCAGCTACACTTCCGGTGAA+TGG - chr3.4:831422-831441 MS.gene50823:intron 55.0%
GGGAGATGGAGTTGTGGTTG+TGG - chr3.4:834020-834039 MS.gene50823:CDS 55.0%
GGTGAGTGTCCAGTGGAGAA+GGG - chr3.4:833916-833935 MS.gene50823:intron 55.0%
GTAGATGCTGTTCGTCGTGC+AGG - chr3.4:834625-834644 MS.gene50823:intron 55.0%
GTGTCCAGTGGAGAAGGGAA+AGG - chr3.4:833921-833940 MS.gene50823:intron 55.0%
TGAAGCCATGTCAGACGAGG+AGG - chr3.4:831280-831299 MS.gene50823:intron 55.0%
TGAAGGGAATGGAGAGGAGG+AGG + chr3.4:833472-833491 None:intergenic 55.0%
TGCAGGAGACCGCATTTAGC+AGG - chr3.4:834900-834919 MS.gene50823:intron 55.0%
TGGACCAGGGATGGCCAATT+CGG - chr3.4:830854-830873 MS.gene50823:intron 55.0%
TGGGGAAGGAGTTAGTGGAG+AGG + chr3.4:833444-833463 None:intergenic 55.0%
TGGTGAAGGGAATGGAGAGG+AGG + chr3.4:833475-833494 None:intergenic 55.0%
TTCAGACGGTGAGTGTCCAG+TGG - chr3.4:833909-833928 MS.gene50823:intron 55.0%
! CGTTGATAGAAGACGCCGCA+TGG - chr3.4:830927-830946 MS.gene50823:intron 55.0%
! GTTTTCCAGTAGAGCCGGGA+TGG + chr3.4:832595-832614 None:intergenic 55.0%
! TGTACTGATGCAGCTGCTCG+TGG - chr3.4:832944-832963 MS.gene50823:intron 55.0%
!! CCTGATGCTGAGTGGGTTAG+TGG - chr3.4:831482-831501 MS.gene50823:intron 55.0%
!! TGATAAGCTGAGGGGTACCG+AGG - chr3.4:830479-830498 MS.gene50823:intron 55.0%
ACGAGCAGAACTCTCCTGGC+CGG + chr3.4:830546-830565 None:intergenic 60.0%
AGGGGAACTCGGTCTACCTG+TGG - chr3.4:834645-834664 MS.gene50823:intron 60.0%
ATGGAGAGGAGGAGGAGAGC+TGG + chr3.4:833464-833483 None:intergenic 60.0%
ATTGCTGCAGAGACCGGCAG+TGG - chr3.4:830426-830445 MS.gene50823:intron 60.0%
CGGTGAGTGTCCAGTGGAGA+AGG - chr3.4:833915-833934 MS.gene50823:intron 60.0%
GAGCCGTGAGCGAAAGAAGC+AGG - chr3.4:833627-833646 MS.gene50823:CDS 60.0%
GCTTGTACAGAGGCGAGGCA+GGG - chr3.4:833976-833995 MS.gene50823:CDS 60.0%
GGACCAGGGATGGCCAATTC+GGG - chr3.4:830855-830874 MS.gene50823:intron 60.0%
GGGTGGTGAAGGGAATGGAG+AGG + chr3.4:833478-833497 None:intergenic 60.0%
GTTCCCGAATTGGCCATCCC+TGG + chr3.4:830861-830880 None:intergenic 60.0%
GTTCGTCGTGCAGGGGAACT+CGG - chr3.4:834634-834653 MS.gene50823:intron 60.0%
TGCTTGTACAGAGGCGAGGC+AGG - chr3.4:833975-833994 MS.gene50823:CDS 60.0%
TGGAGAGGAGGAGGAGAGCT+GGG + chr3.4:833463-833482 None:intergenic 60.0%
AAGAAGTCTCTCCGCCGGCC+AGG - chr3.4:830529-830548 MS.gene50823:intron 65.0%
AGCAGAACTCTCCTGGCCGG+CGG + chr3.4:830543-830562 None:intergenic 65.0%
AGGAGGAGGAGAGCTGGGGA+AGG + chr3.4:833458-833477 None:intergenic 65.0%
CCAACCCATCCCGGCTCTAC+TGG - chr3.4:832587-832606 MS.gene50823:intron 65.0%
CCAGTAGAGCCGGGATGGGT+TGG + chr3.4:832590-832609 None:intergenic 65.0%
GGAGAGGAGGAGGAGAGCTG+GGG + chr3.4:833462-833481 None:intergenic 65.0%
TGATGCAGCTGCTCGTGGCG+TGG - chr3.4:832949-832968 MS.gene50823:intron 65.0%
AGAGGCGAGGCAGGGCAGCA+CGG - chr3.4:833984-834003 MS.gene50823:CDS 70.0%
GCGAGGCAGGGCAGCACGGA+TGG - chr3.4:833988-834007 MS.gene50823:CDS 75.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 829434 835477 829434 ID=MS.gene50823
chr3.4 mRNA 829434 835477 829434 ID=MS.gene50823.t1;Parent=MS.gene50823
chr3.4 exon 835133 835477 835133 ID=MS.gene50823.t1.exon1;Parent=MS.gene50823.t1
chr3.4 CDS 835133 835477 835133 ID=cds.MS.gene50823.t1;Parent=MS.gene50823.t1
chr3.4 exon 834237 834527 834237 ID=MS.gene50823.t1.exon2;Parent=MS.gene50823.t1
chr3.4 CDS 834237 834527 834237 ID=cds.MS.gene50823.t1;Parent=MS.gene50823.t1
chr3.4 exon 833936 834049 833936 ID=MS.gene50823.t1.exon3;Parent=MS.gene50823.t1
chr3.4 CDS 833936 834049 833936 ID=cds.MS.gene50823.t1;Parent=MS.gene50823.t1
chr3.4 exon 833380 833819 833380 ID=MS.gene50823.t1.exon4;Parent=MS.gene50823.t1
chr3.4 CDS 833380 833819 833380 ID=cds.MS.gene50823.t1;Parent=MS.gene50823.t1
chr3.4 exon 831911 832238 831911 ID=MS.gene50823.t1.exon5;Parent=MS.gene50823.t1
chr3.4 CDS 831911 832238 831911 ID=cds.MS.gene50823.t1;Parent=MS.gene50823.t1
chr3.4 exon 830245 830397 830245 ID=MS.gene50823.t1.exon6;Parent=MS.gene50823.t1
chr3.4 CDS 830245 830397 830245 ID=cds.MS.gene50823.t1;Parent=MS.gene50823.t1
chr3.4 exon 829955 830006 829955 ID=MS.gene50823.t1.exon7;Parent=MS.gene50823.t1
chr3.4 CDS 829955 830006 829955 ID=cds.MS.gene50823.t1;Parent=MS.gene50823.t1
chr3.4 exon 829434 829489 829434 ID=MS.gene50823.t1.exon8;Parent=MS.gene50823.t1
chr3.4 CDS 829434 829489 829434 ID=cds.MS.gene50823.t1;Parent=MS.gene50823.t1
Gene Sequence

>MS.gene50823

ATGAATGTTACTCGTTCTGCTCTGAAACTCCATTTTCAAAATTCACCGATTCGCTACCATCAATTTCTCTTCTTCTCTCGATTCAACAATGCTCTTATTCGCAATCCCACTTTATCTTCGTCTTCTCTTTTCAATTTCAATGCAACGCGTTTCTTTTCTCTAACCCTTCCACGTCAAACACAGCAGACACAGCCCTTTGTTGGAAGCGCCGTTTCATCAGAAGATTACAATGGAAGAGACACTTTCTTTGCTGAAGATAACGTTTCGTGGAGTTCAATTGGTCTTTCTCATACCCTTTCTCGAGCTCTCTCTAATATTGCTCTCAATACACCCTCTCTCGTTCAGGTCATTTCTCTCTCTTTTCACTATTCCTTCCTGCTATATTTCTGTTTTTTTATTTATTTTGTTTTAATTTTAATCAACCCTGTATGTTCTAAATTTGATTTTTTTTTAACTAATTGAAAATGGTTTGAAGTGATTAATTAGCTTTAGTCAAGGTTGAATTGATCCGGAGAACCAATTTCGAACTTTGTTGGAACAACTTTACTCGGACTTTTTTTTATTGGTCCGTATGCTAGTGACAAGTACCACTTGAAACTGATAACTACAATGTCTTAGTTCAAACCCGGGTAAAAGTGTCCAGCCTAGCAATATCAACATTCCCGAGCTAAGCATTACGGACTTCTTACTCGGACTTTACTTAGCAACAAAGTTATAGTTTTATTTTCCTTATTGTATTAATTTGCTTATGATGTCAATAAAATAAAATAAATCCAACCATCGTTTTAGAGTTGTGACTTGTGTCAAGAATGAAATTGGGTAAGTTTAGATTATAACTTGGAATAGAATCTGAGAAGTGATAAATGATTTTGTAATTTTTGTTTTTATTCTTCTATTCGGACTGCTGAGGCTTATTGATGATGACCATTTCTTCTTCTGTGTGTGTACAGGCTTCTTCTATACCATCTGTGTTGTCAGGGAAGGATGTAGTTATTGCTGCAGAGACCGGCAGTGGTAAGACATACAGTTATCTACTTCCTCTCATTGATAAGCTGAGGGGTACCGAGGAACATTCTTTGGATGTTGTATCTGATAAAGAAGTCTCTCCGCCGGCCAGGAGAGTTCTGCTCGTGCTTTGTCCGAATGTGCAATTGTGTGAGCAGGTAGTTAGGATGGCTAATAGTCTCTGTGGAGACAATGATGAAACCATTGTTAGTGCTGCAGCCATTTGTGGGAAACAGGTAGTGAGATGCTCTGCGTTTTTATCTCTTATTTCCTGATGCTATTTTTGGTTATCTTTGTGCATTTATAGTTATATGAAATTTGTGGTTTACTACACTATATGTCTGGTTGTTTGTACATGAAGTTTTAGCTATCTTCTCAAGTTTTCGCTCTGATTCTCAGCACTAAAAATCTTTTTTGGACCAGGGATGGCCAATTCGGGAACCTGATATCATTGTGACAACACCTGCTGCTCTTCTCAATCATGTTGACGTTGATAGAAGACGCCGCATGGAATTTATGCATGGTGTTAAATATGTGGTATCTTTCTTGTTTTATGATCTTATGTAGCTTTGTCGAACTAAAACTGAAGACATATGAACTTAACATTGGCTCCTATTTATGTATGTTTATATTTTCTAATTTCTAATTGGTAGGTGTTTGATGAAGCTGATATGCTTCTCTGTGGGAGCTTCCAGAATAAAGTAATCCGCCTGATTAACTTGCTCCGCTATGATGAAAAACTCTTGTCTCGATCGAAAACATCAGTATCAGAGTTGCCAGTGACATCGGAATCTTCTTTGTTGTCGCATGATGCTTCAGAAGGTGAAGAGGAATTTCCAATTGAAGCCATGTCAGACGAGGAGGATGATGATAACGAGGATATTGCCAATATTAATAACGAAGCTGAATCTGTCAAGAAAACAAGAAGAGACTGGAGAAGAGTGAGGAAATATTTTGAGCGAAGTAAACAATATGTTTTTGTTGCAGCTACACTTCCGGTGAATGGAAAGAAAACAGCGGGAGCATTATTGAAACACATGTTTCCTGATGCTGAGTGGGTTAGTGGAAACTATCTTCATTGTCACAATCCAAGGTGCTATATTTTCCCCCTTTTTGTACTTATTATCAATAAAACATTCAATTTTCTTTTCTACTTGGTATTCAACTTCTGTCGTGAAATTAGGAAAGTGGTCAGTGCATCAGTGGTCGTATATCTTTTTGGTGGCCATTGATTGTGCACTGTCAATAATGTGACAGGAATGTGTGCGGAGAAAATTAAGTCAAACATTACTAATTTACCAAGGTAAAAGATGGTAAGAACATTTTCAAAAACCAAGTTTAGAATTTATTGCCCATGAGAGACTTAGATGAATACCTAGGAAGTATGATCATAAGTGGAGACCTTAAGTTAGTCAAACAGATCCAGGTTTACTTAAATTGAAGAAAAGATCTTTGATGAAATTCGCAAAAACAGATAGATGAAATATGATTGTTTTTCAGTTTGAATGGTAAGATGAGATTATCTATACATATTGAAACAATTATAAATGATTTAATAAAATTATTTGAATTAATTACATTGTTTATTAATAAATGTAGTATAGTGACTTAAAAGTGACAAAGACAATATTAAATAAAGATTATAAAGTTAGAAAAACAAAATTAATACTTCATCTGTCTCAAAATAATAGGCGTTTAATGTTTATGATCGATTATAAAGTAAATGATTAATTGTGTTGATTTCATCGTGTGACATCTATAGTATGTCACTTTGTAACAAGGTGCATAAACAACATCTATAGTCCACCTTGAGTGTCGAGAGCTAACCATTATTAGCATACAATTAGTTTGCAACAGTCACTTGTGTATTCTTATACAAATACCACATAGGCAGTTCGAGGAACTTGTACTCTCCCACTCAAATTCACTGTTTAACGGCCACACTCTTTCTATTTTATTCTCCTATTACTGATAGTCTCCCTTCACCCTTCTAACTAACAACTACTAACAGACTATTACAGTTACAACATCCTTTACTAATTTCCTCTCACTCCTTATTCTTTTTCGGTTTCCTCTTTACATGTCTAATGGGAAGCATTATTCTACCATATATGCACAACATCTTTGACTTATGCTATTTTGTGATATCCAACCCATCCCGGCTCTACTGGAAAACAGTGTCTTCATTTATGCATTTGTGATTTCATTTGTTATTGTTTCTTTTCAATTTCCAGATTGAAGCAAAGATGGATAGAAGTGACCGTTGATACACAAGTGAAAGAGCTCATAAGGGCTGTGAATCACAGTTTAAAATCGGAAGATTTGGATAATGGTGGTGGCATTCATAGAACAATGGTGTTTGCCAACACAGTTGAGGCTGTTGAAGCTGTGGTGAAGATATTGGGCTATGCTGGGCTTGAATGTTTACGTTATCATAAGAATTGCACGTTGGATGAGCGGGCACAAACTTTAGTTGATTTCTACGACAAAGGTGGTGTTCTTGTATGTACTGATGCAGCTGCTCGTGGCGTGGATATTCCAAATGTCTCTCATGTTATTCAGGTATGCTTTTCCTTTTACATGTTATAAGTTATAGGAATACTTTTTGCAATCGCTTAAATTTTGAAAGTTCTTGGGTTGAGAACAAACAGAAAAGGGAGGATTAAACATCAATTAGAATAAGTAAATATGTTGATGAGTTTAAAATATCAAAGTTTGTTCAGAAAATTAGAATGTTTGCGCATAAATATGACAGAATTGAAGTTCTATCCAATTAACACTACACCTTTTCTACTTGCGGACATTGATTGTGAAGATAAATAGTTTGTTGTTTCAATCAATTTCTCTTATTTATAAGCTTGCTCTCTCTTCACATCCCATATTTTTATAATTAAACTTATAGGAATTAGGAAAGCATCTCCTACATAGGGAATAGGGGAGTTATCCCGTGCACCATTTGCTCAGTGATGCATGTATACATTGGGTGTAAAATAGTAAATCTACCTCTCCACTAACTCCTTCCCCAGCTCTCCTCCTCCTCTCCATTCCCTTCACCACCCTCTGTCGTTTGTCAATCATTTAAGGACCCAGAAATAAAACTGCAAAATGCTTTTTAATTAAAATCCTCCGAATTTGTGCATTTTTATAGACAATTTTCTTTGTAATTGGATTCAATTAAAATAAGAACGGAGCCGTGAGCGAAAGAAGCAGGTTTCTATGGTTTTCATGATCAGAGCTAGTTGGTGCAGCACCTTTTTATTATTATTTAAAACAAAAGTAAAATTGTTTGTTGGGAGAATGAAGTGTGGGCGATTTATTTATGTCAAAATGTTTATCAGTGTTTCTCTGGATTTGTCTTTGTTCCCTAATCATTTCTCTTGATTTGTATTTGAAGACATGAGTCTCACCCCTTTTCACCAAAGATCTTCAATGCGATCTTTTACTTTCTCCTTTGCTTCTTCTAATAATTCTTCAGACGGTGAGTGTCCAGTGGAGAAGGGAAAGGAAATTGGGGAGTGGTGAATCTGTACGCATCATGCTTGTACAGAGGCGAGGCAGGGCAGCACGGATGGATGATTGAGGGGAGATGGAGTTGTGGTTGTGGGAGAGATGGGATAGAAGAAAACGAGTTGACCATTGTACCCTTAATTATAAACTCAATCCGGACCGTTGATTAATTACAAAATTTAAAAAGCACTTGCAAGGTCTTATATATCATGTTTAAGTAGCGTTTGGTAACTTTCACACGATGGTCTCTCTTTTGGAGTGTTTTTTCGTTTGTGTTTAAAGTTCAAACCTCAAATCATGTTATGTAATATACATTATTTCATGGTTTATTAAGCCTCTTATTTGAGTCACTTCATTCCCTATATGACATTGTGACTCTTAGTTCATTATATTACCATGCATGTATCCAACTCTCTTACTTTCATAGTCTGCTTCAGTGATGCTACTATTATGACCATGCTTTCAACTGTACTGTTTCTTATTGTGTTTGTTTTATTTTTATATAACCTTAGGTGTTATATTTTATTATATATATGTTTTCATTCTCAATGTTGTGCATGTGTTTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGGATTGGTCGTACAGCTAGAGCTGGCCAAATCGGACTAGTTACCAGCATGTATACCGAATCCAACAGAGAGCTTGTAGATGCTGTTCGTCGTGCAGGGGAACTCGGTCTACCTGTGGTAAATTATAAAACTGTATTTATTGGCTGTAGTAATCTTGGACAGATCCATACACATTGAGATATTTGAATAAAATGTATCAAAAAATATTTATACATTGGGAAAATTAGATGCTGTTCGCGTATGATGAGAGCATTAACTATAGGCTGAATAACTTCTCACATAATTCCAACTATACAAGTCATTGATATTTGATAGATTCCAACATTTTGGAGTGATTGTTACACTATTAATGCAGGAGACCGCATTTAGCAGGAAAAGAAGCTTCCGTAACAAGATAAAAAAGAAAGGTAAAGTTTAATGTTTGATTCCATAGAGCTTTAAAAATAAAAAAAAGATAACTAAAGTTTAATGTTTGATTCCATAGAGCTTTAAAAATCAATACTGTGCATAGATATCTATATTATGCATTGAGTTAAAAAGGTTAAGTGATGATGTTTATGTTTGTGTTCGAAATAGAAAATGCGGATCAGCATTTAAACTTCATACATTATCTTGATTTGTCACATGATTAGTTTTTTTTTTTATATTTTTTTTTTTACCTTGGAGGATCTCTAAGATTAGTTTTCATATTACTTCGGAGTCTTGTATCCTTATAAATAGGGGTTACTATTTAGTCTTTTTGTGTCATTCAATAAATAATTATATTCATATTTTAAAGTCTTTATTCTTTATCTCAGCTCTTTTTCTAAAACCTTGTAACTTCGACAACGATAAGCTTGACCTAACCAGTAACCATCATTTTGTATTTGTAGCAAGTGCTAACAAAGTCAGAGATTCAGCAACCATTGAAGAGAGTCTTACAGCGTGA
Protein sequence

>MS.gene50823.t1

MNVTRSALKLHFQNSPIRYHQFLFFSRFNNALIRNPTLSSSSLFNFNATRFFSLTLPRQTQQTQPFVGSAVSSEDYNGRDTFFAEDNVSWSSIGLSHTLSRALSNIALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEHSLDVVSDKEVSPPARRVLLVLCPNVQLCEQVVRMANSLCGDNDETIVSAAAICGKQGWPIREPDIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKVIRLINLLRYDEKLLSRSKTSVSELPVTSESSLLSHDASEGEEEFPIEAMSDEEDDDNEDIANINNEAESVKKTRRDWRRVRKYFERSKQYVFVAATLPVNGKKTAGALLKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVKELIRAVNHSLKSEDLDNGGGIHRTMVFANTVEAVEAVVKILGYAGLECLRYHKNCTLDERAQTLVDFYDKGGVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELVDAVRRAGELGLPVETAFSRKRSFRNKIKKKASANKVRDSATIEESLTA