Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52274.t1 | XP_013449384.1 | 99.1 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 1.20E-59 | 238.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52274.t1 | P62772 | 93.7 | 111 | 7 | 0 | 2 | 112 | 1 | 111 | 2.2e-57 | 222.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52274.t1 | A2Q5X9 | 99.1 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 8.8e-60 | 238.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058545 | MS.gene52274 | 0.987782 | 1.62E-171 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52274 | MS.gene47121 | PPI |
| MS.gene52274 | MS.gene55480 | PPI |
| MS.gene52274 | MS.gene074111 | PPI |
| MS.gene074110 | MS.gene52274 | PPI |
| MS.gene52274 | MS.gene55486 | PPI |
| MS.gene47123 | MS.gene52274 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52274.t1 | MTR_7g080803 | 99.115 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 8.96e-82 | 234 |
| MS.gene52274.t1 | MTR_5g008460 | 88.496 | 113 | 13 | 0 | 1 | 113 | 1 | 113 | 2.16e-73 | 213 |
| MS.gene52274.t1 | MTR_7g080793 | 70.370 | 108 | 31 | 1 | 1 | 108 | 1 | 107 | 1.56e-51 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52274.t1 | AT4G10040 | 91.071 | 112 | 10 | 0 | 1 | 112 | 1 | 112 | 4.39e-75 | 218 |
| MS.gene52274.t1 | AT1G22840 | 89.286 | 112 | 12 | 0 | 1 | 112 | 1 | 112 | 2.07e-73 | 213 |
| MS.gene52274.t1 | AT1G22840 | 88.095 | 84 | 10 | 0 | 1 | 84 | 1 | 84 | 4.53e-52 | 159 |
Find 42 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGCCGGCGGCGGGGTTTC+CGG | 0.164134 | 7.4:+25686443 | None:intergenic |
| TCGCCGGCGGCGGGGTTTCC+GGG | 0.240370 | 7.4:+25686444 | None:intergenic |
| ATCAATGTGTTGTACCTTCT+TGG | 0.253507 | 7.4:+25685011 | None:intergenic |
| TCAATGTGTTGTACCTTCTT+GGG | 0.277885 | 7.4:+25685012 | None:intergenic |
| CCCAATCTGAATGGTTTGTT+TGG | 0.305862 | 7.4:-25685135 | MS.gene52274:CDS |
| AAGATCTTCTCGCCGGCGGC+GGG | 0.329325 | 7.4:+25686435 | None:intergenic |
| GGTTTGTTTGGAAGGCAATC+TGG | 0.365006 | 7.4:-25685123 | MS.gene52274:CDS |
| CAAGAACAAGGCTGTGGATT+GGG | 0.392913 | 7.4:-25685067 | MS.gene52274:CDS |
| GAAGATCTTCTCGCCGGCGG+CGG | 0.418146 | 7.4:+25686434 | None:intergenic |
| AGATTAGCATACCTTGTTTG+TGG | 0.420990 | 7.4:+25686367 | None:intergenic |
| TCCAAACAAACCATTCAGAT+TGG | 0.424075 | 7.4:+25685134 | None:intergenic |
| GTTCTTGTTAGCCGCAGAAT+AGG | 0.424887 | 7.4:+25685083 | None:intergenic |
| AGGCAATCTGGCACAACTCC+TGG | 0.433988 | 7.4:-25685111 | MS.gene52274:CDS |
| ATCTGAATGGTTTGTTTGGA+AGG | 0.441498 | 7.4:-25685131 | MS.gene52274:CDS |
| ATCTTAATGCAGTACATCCC+AGG | 0.460110 | 7.4:-25684771 | MS.gene52274:intron |
| CCAAACAAACCATTCAGATT+GGG | 0.484079 | 7.4:+25685135 | None:intergenic |
| ACCTTAGGACCCAATCTGAA+TGG | 0.493293 | 7.4:-25685144 | MS.gene52274:intron |
| CAATGTGTTGTACCTTCTTG+GGG | 0.494965 | 7.4:+25685013 | None:intergenic |
| ACAAGAACAAGGCTGTGGAT+TGG | 0.503827 | 7.4:-25685068 | MS.gene52274:CDS |
| GTGGCCGGCGCCTTTGTCGA+CGG | 0.510944 | 7.4:+25686386 | None:intergenic |
| TAGCATACCTTGTTTGTGGC+CGG | 0.513390 | 7.4:+25686371 | None:intergenic |
| GGTGTGGCACTGAGCGCACT+TGG | 0.520968 | 7.4:+25686407 | None:intergenic |
| TCTTTCGATGAAGCTCCTCC+CGG | 0.532703 | 7.4:-25686462 | MS.gene52274:CDS |
| TCTTGAGGCTTCTTAAGACC+AGG | 0.550991 | 7.4:+25684732 | None:intergenic |
| CCTCCCGGAAACCCCGCCGC+CGG | 0.551439 | 7.4:-25686447 | MS.gene52274:CDS |
| AGATCTTCTCGCCGGCGGCG+GGG | 0.553653 | 7.4:+25686436 | None:intergenic |
| GCCGCAGAATAGGAATATCC+AGG | 0.554976 | 7.4:+25685093 | None:intergenic |
| CAGTGCCACACCGTCGACAA+AGG | 0.583975 | 7.4:-25686396 | MS.gene52274:CDS |
| ATAAGATCAGCACGTTCTTG+AGG | 0.588809 | 7.4:+25684717 | None:intergenic |
| TTTGAAGATCTTCTCGCCGG+CGG | 0.594334 | 7.4:+25686431 | None:intergenic |
| GGCTAACAAGAACAAGGCTG+TGG | 0.616138 | 7.4:-25685073 | MS.gene52274:CDS |
| CACACCGTCGACAAAGGCGC+CGG | 0.616193 | 7.4:-25686390 | MS.gene52274:CDS |
| AAAGGCGCCGGCCACAAACA+AGG | 0.616957 | 7.4:-25686378 | MS.gene52274:intron |
| GTACATCCCAGGGACAAAGA+TGG | 0.620699 | 7.4:-25684760 | MS.gene52274:CDS |
| TCTTAATGCAGTACATCCCA+GGG | 0.621255 | 7.4:-25684770 | MS.gene52274:intron |
| GAACAAGGCTGTGGATTGGG+AGG | 0.622907 | 7.4:-25685064 | MS.gene52274:CDS |
| TCCTGGATATTCCTATTCTG+CGG | 0.643110 | 7.4:-25685094 | MS.gene52274:CDS |
| CGGCGCCTTTGTCGACGGTG+TGG | 0.644445 | 7.4:+25686391 | None:intergenic |
| TTACTTGCTGAACCCCAAGA+AGG | 0.647503 | 7.4:-25685025 | MS.gene52274:intron |
| CCGGCGGCGGGGTTTCCGGG+AGG | 0.653806 | 7.4:+25686447 | None:intergenic |
| GTTCAGCAAGTAATCATACA+AGG | 0.660683 | 7.4:+25685035 | None:intergenic |
| TTCTGCGGCTAACAAGAACA+AGG | 0.684879 | 7.4:-25685079 | MS.gene52274:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATATTTACATAGTTTA+GGG | - | chr7.4:25685311-25685330 | MS.gene52274:intron | 10.0% |
| !! | TTATTATATTTACATAGTTT+AGG | - | chr7.4:25685310-25685329 | MS.gene52274:intron | 10.0% |
| !!! | ACAAATTTTTATAAACTTTA+AGG | + | chr7.4:25685190-25685209 | None:intergenic | 10.0% |
| !!! | CTTTTTTTATATTTATTGTA+AGG | - | chr7.4:25685577-25685596 | MS.gene52274:intron | 10.0% |
| !! | ATAAAAATGTCTATATCAAA+TGG | - | chr7.4:25686195-25686214 | MS.gene52274:intron | 15.0% |
| !!! | TCAATTTTTGAAATAACATT+GGG | + | chr7.4:25685659-25685678 | None:intergenic | 15.0% |
| !!! | TTCAATTTTTGAAATAACAT+TGG | + | chr7.4:25685660-25685679 | None:intergenic | 15.0% |
| !! | GTTAATTTATTATGGTTATG+TGG | - | chr7.4:25686299-25686318 | MS.gene52274:intron | 20.0% |
| !! | GTTATGCTGTTAATTTATTA+TGG | - | chr7.4:25686291-25686310 | MS.gene52274:intron | 20.0% |
| !! | TATGAAAATGTTGTTATACT+TGG | - | chr7.4:25685385-25685404 | MS.gene52274:intron | 20.0% |
| !!! | AACTCAAGGTATTATTATAT+AGG | - | chr7.4:25685802-25685821 | MS.gene52274:intron | 20.0% |
| !!! | CAATTTTTGAAATAACATTG+GGG | + | chr7.4:25685658-25685677 | None:intergenic | 20.0% |
| ! | AAATAAACTTAACAGCGATT+AGG | + | chr7.4:25684905-25684924 | None:intergenic | 25.0% |
| ! | GTAGCTTAACTATATGAATT+CGG | - | chr7.4:25685154-25685173 | MS.gene52274:intron | 25.0% |
| ! | TAGTTAAGCTACTAAATTGA+TGG | + | chr7.4:25685146-25685165 | None:intergenic | 25.0% |
| ! | TTACATAATGACTTTGTTCA+AGG | + | chr7.4:25685952-25685971 | None:intergenic | 25.0% |
| !! | TAGTGTTTTCTTCAATTAGT+AGG | - | chr7.4:25686266-25686285 | MS.gene52274:intron | 25.0% |
| !!! | ATGTTAGCTTTACCAAATTA+TGG | - | chr7.4:25685054-25685073 | MS.gene52274:CDS | 25.0% |
| AAAACGAAAGAAAACAACAC+AGG | + | chr7.4:25684849-25684868 | None:intergenic | 30.0% | |
| AGTTGAATGAACATAACTCA+AGG | - | chr7.4:25685788-25685807 | MS.gene52274:intron | 30.0% | |
| ATTATGGTTATGTGGATGAT+AGG | - | chr7.4:25686307-25686326 | MS.gene52274:intron | 30.0% | |
| GATTGTTCAAGATCTTGTTA+GGG | - | chr7.4:25684942-25684961 | MS.gene52274:intron | 30.0% | |
| GTTGAAGCTTGAAATGTTTA+GGG | - | chr7.4:25684995-25685014 | MS.gene52274:intron | 30.0% | |
| GTTGTTATACTTGGTATGTT+CGG | - | chr7.4:25685394-25685413 | MS.gene52274:intron | 30.0% | |
| TGATTGTTCAAGATCTTGTT+AGG | - | chr7.4:25684941-25684960 | MS.gene52274:intron | 30.0% | |
| TGTTGAAGCTTGAAATGTTT+AGG | - | chr7.4:25684994-25685013 | MS.gene52274:intron | 30.0% | |
| TTATGTTCATTCAACTGACT+CGG | + | chr7.4:25685784-25685803 | None:intergenic | 30.0% | |
| ! | TGTTTTCTTCAATTAGTAGG+AGG | - | chr7.4:25686269-25686288 | MS.gene52274:intron | 30.0% |
| !! | TGTAGATCTGAGAGTTTTAT+GGG | + | chr7.4:25684823-25684842 | None:intergenic | 30.0% |
| AATGACTTTGTTCAAGGAGA+GGG | + | chr7.4:25685946-25685965 | None:intergenic | 35.0% | |
| ACGCGTATCAGTAAAATACT+TGG | + | chr7.4:25686355-25686374 | None:intergenic | 35.0% | |
| ATCAATGTGTTGTACCTTCT+TGG | + | chr7.4:25686146-25686165 | None:intergenic | 35.0% | |
| CCAAACAAACCATTCAGATT+GGG | + | chr7.4:25686022-25686041 | None:intergenic | 35.0% | |
| CTAAATTGCGTTGTCATTCA+CGG | - | chr7.4:25685221-25685240 | MS.gene52274:intron | 35.0% | |
| GAAATAACATTGGGGTGATA+TGG | + | chr7.4:25685650-25685669 | None:intergenic | 35.0% | |
| GATCGGACAAAACCATAATT+TGG | + | chr7.4:25685069-25685088 | None:intergenic | 35.0% | |
| GTTCAGCAAGTAATCATACA+AGG | + | chr7.4:25686122-25686141 | None:intergenic | 35.0% | |
| TAATGACTTTGTTCAAGGAG+AGG | + | chr7.4:25685947-25685966 | None:intergenic | 35.0% | |
| TCAATGTGTTGTACCTTCTT+GGG | + | chr7.4:25686145-25686164 | None:intergenic | 35.0% | |
| TCCAAACAAACCATTCAGAT+TGG | + | chr7.4:25686023-25686042 | None:intergenic | 35.0% | |
| ! | AGAAGGTACAACACATTGAT+TGG | - | chr7.4:25686146-25686165 | MS.gene52274:intron | 35.0% |
| ! | AGATTAGCATACCTTGTTTG+TGG | + | chr7.4:25684790-25684809 | None:intergenic | 35.0% |
| ! | ATCATTAGCTTCAACCAACT+AGG | + | chr7.4:25685095-25685114 | None:intergenic | 35.0% |
| ! | GGGTTTAAGATTCTATTGTG+TGG | - | chr7.4:25684962-25684981 | MS.gene52274:intron | 35.0% |
| ! | GTGTAGATCTGAGAGTTTTA+TGG | + | chr7.4:25684824-25684843 | None:intergenic | 35.0% |
| ! | TGTTTGGTTCAAAAGAGACA+AGG | - | chr7.4:25685419-25685438 | MS.gene52274:intron | 35.0% |
| !! | ATCTGAATGGTTTGTTTGGA+AGG | - | chr7.4:25686023-25686042 | MS.gene52274:intron | 35.0% |
| !! | GTAGATCTGAGAGTTTTATG+GGG | + | chr7.4:25684822-25684841 | None:intergenic | 35.0% |
| !!! | TCGTTTTGTTTGAGATGAGA+GGG | - | chr7.4:25685462-25685481 | MS.gene52274:intron | 35.0% |
| !!! | TTCGTTTTGTTTGAGATGAG+AGG | - | chr7.4:25685461-25685480 | MS.gene52274:intron | 35.0% |
| AAGAGACAAGGAAAGGTTTC+TGG | - | chr7.4:25685431-25685450 | MS.gene52274:intron | 40.0% | |
| ATAAGATCAGCACGTTCTTG+AGG | + | chr7.4:25686440-25686459 | None:intergenic | 40.0% | |
| ATCTTAATGCAGTACATCCC+AGG | - | chr7.4:25686383-25686402 | MS.gene52274:CDS | 40.0% | |
| CAATGTGTTGTACCTTCTTG+GGG | + | chr7.4:25686144-25686163 | None:intergenic | 40.0% | |
| CTTGGTATGTTCGGAATGTT+TGG | - | chr7.4:25685403-25685422 | MS.gene52274:intron | 40.0% | |
| CTTGTGAAGCAAACCAAAGA+GGG | + | chr7.4:25685495-25685514 | None:intergenic | 40.0% | |
| GAAAAACCATCTTTGTCCCT+GGG | + | chr7.4:25686403-25686422 | None:intergenic | 40.0% | |
| GACTCGGCTTAAAAACAAGA+AGG | + | chr7.4:25685768-25685787 | None:intergenic | 40.0% | |
| GGTTCAAAAGAGACAAGGAA+AGG | - | chr7.4:25685424-25685443 | MS.gene52274:intron | 40.0% | |
| TAGCAGCAGCAGAATAGAAA+AGG | + | chr7.4:25685865-25685884 | None:intergenic | 40.0% | |
| TCCTGGATATTCCTATTCTG+CGG | - | chr7.4:25686060-25686079 | MS.gene52274:intron | 40.0% | |
| TCTTAATGCAGTACATCCCA+GGG | - | chr7.4:25686384-25686403 | MS.gene52274:CDS | 40.0% | |
| TTAGCTTCAACCAACTAGGT+TGG | + | chr7.4:25685091-25685110 | None:intergenic | 40.0% | |
| TTGGTTGAACCAGACTTTCA+AGG | + | chr7.4:25686336-25686355 | None:intergenic | 40.0% | |
| TTGTGAAGCAAACCAAAGAG+GGG | + | chr7.4:25685494-25685513 | None:intergenic | 40.0% | |
| ! | CTTTATTTGTTGCCGACCTT+AGG | - | chr7.4:25685995-25686014 | MS.gene52274:intron | 40.0% |
| ! | TTCAACCAACTAGGTTGGAT+CGG | + | chr7.4:25685086-25685105 | None:intergenic | 40.0% |
| !! | CCCAATCTGAATGGTTTGTT+TGG | - | chr7.4:25686019-25686038 | MS.gene52274:intron | 40.0% |
| !! | CTCTTTGGTTTGCTTCACAA+GGG | - | chr7.4:25685494-25685513 | MS.gene52274:intron | 40.0% |
| !! | TCTTTGGTTTGCTTCACAAG+GGG | - | chr7.4:25685495-25685514 | MS.gene52274:intron | 40.0% |
| ACAAGAACAAGGCTGTGGAT+TGG | - | chr7.4:25686086-25686105 | MS.gene52274:intron | 45.0% | |
| ACCATTCAGATTGGGTCCTA+AGG | + | chr7.4:25686014-25686033 | None:intergenic | 45.0% | |
| ACCTTAGGACCCAATCTGAA+TGG | - | chr7.4:25686010-25686029 | MS.gene52274:intron | 45.0% | |
| CAAGAACAAGGCTGTGGATT+GGG | - | chr7.4:25686087-25686106 | MS.gene52274:intron | 45.0% | |
| CCTTGTGAAGCAAACCAAAG+AGG | + | chr7.4:25685496-25685515 | None:intergenic | 45.0% | |
| GGAAAAACCATCTTTGTCCC+TGG | + | chr7.4:25686404-25686423 | None:intergenic | 45.0% | |
| GTTCTTGTTAGCCGCAGAAT+AGG | + | chr7.4:25686074-25686093 | None:intergenic | 45.0% | |
| TCTTGAGGCTTCTTAAGACC+AGG | + | chr7.4:25686425-25686444 | None:intergenic | 45.0% | |
| TTCAGATTGGGTCCTAAGGT+CGG | + | chr7.4:25686010-25686029 | None:intergenic | 45.0% | |
| TTCTGCGGCTAACAAGAACA+AGG | - | chr7.4:25686075-25686094 | MS.gene52274:intron | 45.0% | |
| TTTGTCCGATCCAACCTAGT+TGG | - | chr7.4:25685078-25685097 | MS.gene52274:CDS | 45.0% | |
| ! | GATAGGTAGCCTTGAAAGTC+TGG | - | chr7.4:25686324-25686343 | MS.gene52274:intron | 45.0% |
| ! | GGGACAAAGATGGTTTTTCC+TGG | - | chr7.4:25686404-25686423 | MS.gene52274:CDS | 45.0% |
| ! | GGTTTGTTTGGAAGGCAATC+TGG | - | chr7.4:25686031-25686050 | MS.gene52274:intron | 45.0% |
| ! | TAGCATACCTTGTTTGTGGC+CGG | + | chr7.4:25684786-25684805 | None:intergenic | 45.0% |
| ! | TTACTTGCTGAACCCCAAGA+AGG | - | chr7.4:25686129-25686148 | MS.gene52274:intron | 45.0% |
| ! | TTGTCATTCACGGATTGTGG+AGG | - | chr7.4:25685231-25685250 | MS.gene52274:intron | 45.0% |
| !! | CCTCTTTGGTTTGCTTCACA+AGG | - | chr7.4:25685493-25685512 | MS.gene52274:intron | 45.0% |
| !!! | GGTTTTGAAGATCTTCTCGC+CGG | + | chr7.4:25684729-25684748 | None:intergenic | 45.0% |
| AGAGGGTAAACACCCCTCTT+TGG | - | chr7.4:25685479-25685498 | MS.gene52274:intron | 50.0% | |
| GCCGCAGAATAGGAATATCC+AGG | + | chr7.4:25686064-25686083 | None:intergenic | 50.0% | |
| GGCTAACAAGAACAAGGCTG+TGG | - | chr7.4:25686081-25686100 | MS.gene52274:intron | 50.0% | |
| GTACATCCCAGGGACAAAGA+TGG | - | chr7.4:25686394-25686413 | MS.gene52274:CDS | 50.0% | |
| TCTTTCGATGAAGCTCCTCC+CGG | - | chr7.4:25684692-25684711 | MS.gene52274:CDS | 50.0% | |
| TTTGAAGATCTTCTCGCCGG+CGG | + | chr7.4:25684726-25684745 | None:intergenic | 50.0% | |
| ! | GCGTTGTCATTCACGGATTG+TGG | - | chr7.4:25685228-25685247 | MS.gene52274:intron | 50.0% |
| ! | TTTGTTCAAGGAGAGGGCAC+AGG | + | chr7.4:25685940-25685959 | None:intergenic | 50.0% |
| AGGCAATCTGGCACAACTCC+TGG | - | chr7.4:25686043-25686062 | MS.gene52274:intron | 55.0% | |
| !! | GAACAAGGCTGTGGATTGGG+AGG | - | chr7.4:25686090-25686109 | MS.gene52274:intron | 55.0% |
| CAGTGCCACACCGTCGACAA+AGG | - | chr7.4:25684758-25684777 | MS.gene52274:CDS | 60.0% | |
| !! | AAAGGCGCCGGCCACAAACA+AGG | - | chr7.4:25684776-25684795 | MS.gene52274:intron | 60.0% |
| AAGATCTTCTCGCCGGCGGC+GGG | + | chr7.4:25684722-25684741 | None:intergenic | 65.0% | |
| GAAGATCTTCTCGCCGGCGG+CGG | + | chr7.4:25684723-25684742 | None:intergenic | 65.0% | |
| ! | CACACCGTCGACAAAGGCGC+CGG | - | chr7.4:25684764-25684783 | MS.gene52274:intron | 65.0% |
| ! | GGTGTGGCACTGAGCGCACT+TGG | + | chr7.4:25684750-25684769 | None:intergenic | 65.0% |
| AGATCTTCTCGCCGGCGGCG+GGG | + | chr7.4:25684721-25684740 | None:intergenic | 70.0% | |
| CGGCGCCTTTGTCGACGGTG+TGG | + | chr7.4:25684766-25684785 | None:intergenic | 70.0% | |
| GTGGCCGGCGCCTTTGTCGA+CGG | + | chr7.4:25684771-25684790 | None:intergenic | 70.0% | |
| ! | CCTCCCGGAAACCCCGCCGC+CGG | - | chr7.4:25684707-25684726 | MS.gene52274:CDS | 80.0% |
| ! | CTCGCCGGCGGCGGGGTTTC+CGG | + | chr7.4:25684714-25684733 | None:intergenic | 80.0% |
| ! | TCGCCGGCGGCGGGGTTTCC+GGG | + | chr7.4:25684713-25684732 | None:intergenic | 80.0% |
| ! | CCGGCGGCGGGGTTTCCGGG+AGG | + | chr7.4:25684710-25684729 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 25684686 | 25686490 | 25684686 | ID=MS.gene52274 |
| chr7.4 | mRNA | 25684686 | 25686490 | 25684686 | ID=MS.gene52274.t1;Parent=MS.gene52274 |
| chr7.4 | exon | 25686379 | 25686490 | 25686379 | ID=MS.gene52274.t1.exon1;Parent=MS.gene52274.t1 |
| chr7.4 | CDS | 25686379 | 25686490 | 25686379 | ID=cds.MS.gene52274.t1;Parent=MS.gene52274.t1 |
| chr7.4 | exon | 25685026 | 25685159 | 25685026 | ID=MS.gene52274.t1.exon2;Parent=MS.gene52274.t1 |
| chr7.4 | CDS | 25685026 | 25685159 | 25685026 | ID=cds.MS.gene52274.t1;Parent=MS.gene52274.t1 |
| chr7.4 | exon | 25684686 | 25684781 | 25684686 | ID=MS.gene52274.t1.exon3;Parent=MS.gene52274.t1 |
| chr7.4 | CDS | 25684686 | 25684781 | 25684686 | ID=cds.MS.gene52274.t1;Parent=MS.gene52274.t1 |
| Gene Sequence |
| Protein sequence |
