Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54043.t1 | XP_024630973.1 | 97.2 | 179 | 1 | 1 | 1 | 175 | 1 | 179 | 8.00E-56 | 227.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54043.t1 | Q69KL9 | 66.2 | 148 | 36 | 2 | 1 | 140 | 1 | 142 | 5.6e-42 | 172.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54043.t1 | A0A396JEY3 | 97.2 | 179 | 1 | 1 | 1 | 175 | 1 | 179 | 5.7e-56 | 227.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene54043 | 0.824444 | 8.04E-54 | -1.69E-46 |
| MS.gene049631 | MS.gene54043 | 0.805345 | 1.40E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene54043 | 0.810497 | 1.12E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene54043 | 0.809495 | 1.84E-50 | -1.69E-46 |
| MS.gene051241 | MS.gene54043 | 0.82531 | 5.02E-54 | -1.69E-46 |
| MS.gene05134 | MS.gene54043 | 0.81667 | 4.91E-52 | -1.69E-46 |
| MS.gene056631 | MS.gene54043 | 0.811221 | 7.80E-51 | -1.69E-46 |
| MS.gene057705 | MS.gene54043 | 0.809964 | 1.46E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene54043 | 0.813083 | 3.06E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54043.t1 | MTR_8g058530 | 45.556 | 90 | 36 | 4 | 4 | 86 | 9 | 92 | 1.81e-11 | 63.2 |
| MS.gene54043.t1 | MTR_7g108810 | 43.750 | 96 | 41 | 4 | 4 | 92 | 110 | 199 | 2.49e-11 | 63.2 |
| MS.gene54043.t1 | MTR_7g112760 | 47.368 | 76 | 34 | 2 | 4 | 73 | 9 | 84 | 9.94e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54043.t1 | AT4G31580 | 68.783 | 189 | 45 | 3 | 1 | 175 | 1 | 189 | 1.42e-63 | 197 |
| MS.gene54043.t1 | AT4G31580 | 68.783 | 189 | 45 | 3 | 1 | 175 | 1 | 189 | 1.42e-63 | 197 |
| MS.gene54043.t1 | AT2G24590 | 72.432 | 185 | 41 | 4 | 1 | 175 | 1 | 185 | 4.37e-56 | 178 |
| MS.gene54043.t1 | AT1G23860 | 60.733 | 191 | 52 | 5 | 1 | 176 | 1 | 183 | 1.59e-44 | 148 |
| MS.gene54043.t1 | AT1G23860 | 59.067 | 193 | 56 | 6 | 1 | 176 | 1 | 187 | 6.64e-44 | 146 |
| MS.gene54043.t1 | AT1G23860 | 59.067 | 193 | 56 | 6 | 1 | 176 | 1 | 187 | 6.64e-44 | 146 |
| MS.gene54043.t1 | AT1G23860 | 72.222 | 108 | 26 | 1 | 1 | 108 | 1 | 104 | 1.97e-42 | 142 |
| MS.gene54043.t1 | AT1G60650 | 38.211 | 123 | 64 | 3 | 2 | 112 | 12 | 134 | 2.99e-13 | 68.2 |
| MS.gene54043.t1 | AT1G60650 | 38.211 | 123 | 64 | 3 | 2 | 112 | 12 | 134 | 2.99e-13 | 68.2 |
| MS.gene54043.t1 | AT3G53500 | 40.367 | 109 | 58 | 3 | 2 | 108 | 11 | 114 | 2.00e-12 | 65.9 |
| MS.gene54043.t1 | AT1G02840 | 49.351 | 77 | 31 | 3 | 4 | 73 | 9 | 84 | 2.95e-12 | 65.5 |
| MS.gene54043.t1 | AT1G02840 | 49.351 | 77 | 31 | 3 | 4 | 73 | 9 | 84 | 4.16e-12 | 64.7 |
| MS.gene54043.t1 | AT1G02840 | 49.351 | 77 | 31 | 3 | 4 | 73 | 9 | 84 | 4.16e-12 | 64.7 |
| MS.gene54043.t1 | AT1G02840 | 49.351 | 77 | 31 | 3 | 4 | 73 | 9 | 84 | 4.16e-12 | 64.7 |
| MS.gene54043.t1 | AT1G02840 | 49.351 | 77 | 31 | 3 | 4 | 73 | 9 | 84 | 8.20e-12 | 63.9 |
| MS.gene54043.t1 | AT4G02430 | 45.455 | 77 | 34 | 3 | 4 | 73 | 9 | 84 | 2.41e-11 | 61.2 |
| MS.gene54043.t1 | AT2G37340 | 39.450 | 109 | 59 | 3 | 2 | 108 | 11 | 114 | 2.83e-11 | 62.4 |
| MS.gene54043.t1 | AT4G02430 | 45.455 | 77 | 34 | 3 | 4 | 73 | 9 | 84 | 9.47e-11 | 60.8 |
Find 81 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCTGCATATACATTATT+TGG | 0.105018 | 1.2:-10669803 | None:intergenic |
| TTGAGGGAATAGTGAGATTT+TGG | 0.237194 | 1.2:+10669885 | MS.gene54043:CDS |
| GGTGGTGGCGGCGGCGGTGG+TGG | 0.290525 | 1.2:+10668710 | MS.gene54043:CDS |
| AGGTGACACGCTGCGGCGCC+TGG | 0.293523 | 1.2:-10669285 | None:intergenic |
| GGTGGCGGCGGCGGTGGTGG+AGG | 0.354991 | 1.2:+10668713 | MS.gene54043:CDS |
| AGTGGTGGTGGCGGCGGCGG+TGG | 0.365151 | 1.2:+10668707 | MS.gene54043:CDS |
| GTATATGCAGAAATGGCATT+AGG | 0.366155 | 1.2:+10669812 | MS.gene54043:CDS |
| TCGTGTGTACGTGGGTAATC+TGG | 0.366370 | 1.2:+10666288 | MS.gene54043:CDS |
| TGCGACATTCACGAGCAAAA+TGG | 0.370957 | 1.2:-10668793 | None:intergenic |
| TTCAAAATTAACTTCTGCTT+CGG | 0.370967 | 1.2:-10669843 | None:intergenic |
| AAATAATGTATATGCAGAAA+TGG | 0.395375 | 1.2:+10669805 | MS.gene54043:CDS |
| GAGGAGGTGCCATATGCTAA+TGG | 0.408138 | 1.2:+10669353 | MS.gene54043:CDS |
| TTCGCAGGAGTCCAAGTTAT+GGG | 0.409234 | 1.2:+10668867 | MS.gene54043:CDS |
| AGAAGTGGTGGTGGCGGCGG+CGG | 0.411462 | 1.2:+10668704 | MS.gene54043:CDS |
| ATGTTGTGTTTGCAGTGTTT+GGG | 0.412023 | 1.2:+10667225 | MS.gene54043:intron |
| TCTAACCTTCGCCCATAACT+TGG | 0.420005 | 1.2:-10668878 | None:intergenic |
| GGAGGTCGTGGTCGTGGCGG+CGG | 0.422133 | 1.2:+10668731 | MS.gene54043:CDS |
| TATATGCAGAAATGGCATTA+GGG | 0.429730 | 1.2:+10669813 | MS.gene54043:CDS |
| ATCGAGGTGGACTGCGGCTA+CGG | 0.452274 | 1.2:-10668844 | None:intergenic |
| GGTCGTGGTCGTGGCGGCGG+CGG | 0.452453 | 1.2:+10668734 | MS.gene54043:CDS |
| GGTGACACGCTGCGGCGCCT+GGG | 0.452893 | 1.2:-10669284 | None:intergenic |
| GGCGGCGGTGGTGGAGGTCG+TGG | 0.460146 | 1.2:+10668719 | MS.gene54043:CDS |
| GTGACACGCTGCGGCGCCTG+GGG | 0.468230 | 1.2:-10669283 | None:intergenic |
| TCTAGAAGTGGTGGTGGCGG+CGG | 0.468832 | 1.2:+10668701 | MS.gene54043:CDS |
| GGTGGTGGAGGTCGTGGTCG+TGG | 0.472836 | 1.2:+10668725 | MS.gene54043:CDS |
| TTTCGCAGGAGTCCAAGTTA+TGG | 0.489373 | 1.2:+10668866 | MS.gene54043:CDS |
| AGGAGGTGCCATATGCTAAT+GGG | 0.493730 | 1.2:+10669354 | MS.gene54043:CDS |
| ATAACTAACCCATTAGCATA+TGG | 0.508636 | 1.2:-10669362 | None:intergenic |
| GATGCTATACGCGATCTAGA+TGG | 0.514035 | 1.2:+10667307 | MS.gene54043:CDS |
| TGTTATGAGTGTGGTGAACC+TGG | 0.515250 | 1.2:+10668770 | MS.gene54043:CDS |
| ACCTCCTCACGCCCACGGTA+AGG | 0.515427 | 1.2:-10669338 | None:intergenic |
| AACGATGTCTCGTGTGTACG+TGG | 0.515828 | 1.2:+10666279 | None:intergenic |
| ATTAACTTCTGCTTCGGCGT+CGG | 0.515869 | 1.2:-10669837 | None:intergenic |
| GTCAGTGAGAGCAATTATTG+AGG | 0.526754 | 1.2:+10669868 | MS.gene54043:CDS |
| TGTCGCAATCGTGGTGGTGG+TGG | 0.529392 | 1.2:+10668809 | MS.gene54043:CDS |
| AATTCTAGAAGTGGTGGTGG+CGG | 0.541335 | 1.2:+10668698 | MS.gene54043:CDS |
| TGATGACCGCAGAGATGCAC+AGG | 0.545051 | 1.2:+10667285 | MS.gene54043:CDS |
| TCCTTACCGTGGGCGTGAGG+AGG | 0.547639 | 1.2:+10669337 | MS.gene54043:CDS |
| TGGGTTGCTCGAAGACCACC+TGG | 0.550517 | 1.2:+10667244 | MS.gene54043:CDS |
| CACAATTCTAGAAGTGGTGG+TGG | 0.553562 | 1.2:+10668695 | MS.gene54043:CDS |
| TCACGCCCACGGTAAGGAGG+TGG | 0.554871 | 1.2:-10669332 | None:intergenic |
| TCAGTGAGAGCAATTATTGA+GGG | 0.555148 | 1.2:+10669869 | MS.gene54043:CDS |
| CATTCACGAGCAAAATGGCC+AGG | 0.561096 | 1.2:-10668788 | None:intergenic |
| GAATGTCGCAATCGTGGTGG+TGG | 0.564770 | 1.2:+10668806 | MS.gene54043:CDS |
| GCAGTCCACCTCGATTTCGC+AGG | 0.566410 | 1.2:+10668852 | MS.gene54043:CDS |
| AGTCTCAGAGAGGGACCTTG+AGG | 0.566930 | 1.2:+10666318 | MS.gene54043:CDS |
| CTTTCTCACAATTCTAGAAG+TGG | 0.567201 | 1.2:+10668689 | MS.gene54043:CDS |
| ACCTCCTTACCGTGGGCGTG+AGG | 0.571158 | 1.2:+10669334 | MS.gene54043:CDS |
| CTCGTGGACGTAGCTACAGC+AGG | 0.573406 | 1.2:+10669306 | MS.gene54043:CDS |
| TTGTGTGTAACAGGCAAGAA+TGG | 0.578579 | 1.2:+10668653 | MS.gene54043:intron |
| AAGTCAATAAAAGCATAGCC+AGG | 0.586577 | 1.2:-10667262 | None:intergenic |
| GGAGTCCAAGTTATGGGCGA+AGG | 0.589847 | 1.2:+10668873 | MS.gene54043:CDS |
| CGCCGCAGCGTGTCACCTCG+TGG | 0.590625 | 1.2:+10669290 | MS.gene54043:CDS |
| CTTGGACTCCTGCGAAATCG+AGG | 0.595739 | 1.2:-10668860 | None:intergenic |
| GATTTGAAGTGTTATGAGTG+TGG | 0.598609 | 1.2:+10668761 | MS.gene54043:CDS |
| TCTCACAATTCTAGAAGTGG+TGG | 0.600012 | 1.2:+10668692 | MS.gene54043:CDS |
| AGGTCACCACCTCCTTACCG+TGG | 0.601922 | 1.2:+10669326 | MS.gene54043:CDS |
| TAACAGGCAAGAATGGTTGG+AGG | 0.608447 | 1.2:+10668660 | MS.gene54043:intron |
| GTGTAACAGGCAAGAATGGT+TGG | 0.609465 | 1.2:+10668657 | MS.gene54043:intron |
| GCTCGTGAATGTCGCAATCG+TGG | 0.611165 | 1.2:+10668800 | MS.gene54043:CDS |
| CCAATACAACAGTAAAACTC+AGG | 0.612424 | 1.2:-10669955 | None:intergenic |
| GGTGGAGGTCGTGGTCGTGG+CGG | 0.619805 | 1.2:+10668728 | MS.gene54043:CDS |
| TCCTCACGCCCACGGTAAGG+AGG | 0.623016 | 1.2:-10669335 | None:intergenic |
| CCAGGAGTTACAGTCCTCGT+GGG | 0.630414 | 1.2:+10669255 | MS.gene54043:intron |
| ACCAGGAGTTACAGTCCTCG+TGG | 0.630825 | 1.2:+10669254 | MS.gene54043:intron |
| GGTCACCACCTCCTTACCGT+GGG | 0.634356 | 1.2:+10669327 | MS.gene54043:CDS |
| ATGGCACCTCCTCACGCCCA+CGG | 0.635291 | 1.2:-10669343 | None:intergenic |
| AAACACGAAATTCATCCTCA+AGG | 0.640455 | 1.2:-10666333 | None:intergenic |
| GGAGTTACAGTCCTCGTGGG+CGG | 0.645283 | 1.2:+10669258 | MS.gene54043:intron |
| ACGATGTCTCGTGTGTACGT+GGG | 0.656849 | 1.2:+10666280 | None:intergenic |
| GGATTCTAGAGTCTCAGAGA+GGG | 0.661005 | 1.2:+10666309 | MS.gene54043:CDS |
| AACAGGCAAGAATGGTTGGA+GGG | 0.663974 | 1.2:+10668661 | MS.gene54043:intron |
| GTCCACGAGGTGACACGCTG+CGG | 0.671063 | 1.2:-10669292 | None:intergenic |
| GGACTCCTGCGAAATCGAGG+TGG | 0.673792 | 1.2:-10668857 | None:intergenic |
| TGACACGCTGCGGCGCCTGG+GGG | 0.679479 | 1.2:-10669282 | None:intergenic |
| TGCGAAATCGAGGTGGACTG+CGG | 0.679589 | 1.2:-10668850 | None:intergenic |
| CTGCTGTAGCTACGTCCACG+AGG | 0.684355 | 1.2:-10669305 | None:intergenic |
| CGTGAATGTCGCAATCGTGG+TGG | 0.699969 | 1.2:+10668803 | MS.gene54043:CDS |
| TGGATTCTAGAGTCTCAGAG+AGG | 0.702659 | 1.2:+10666308 | MS.gene54043:CDS |
| TCAATAAAAGCATAGCCAGG+TGG | 0.704252 | 1.2:-10667259 | None:intergenic |
| TAGCATCCTGTGCATCTCTG+CGG | 0.708826 | 1.2:-10667291 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGAAGAAAAAAAAATA+TGG | + | chr1.2:10666574-10666593 | MS.gene54043:intron | 10.0% |
| !!! | ATAAAAATTATGTTTTTGTT+TGG | + | chr1.2:10667107-10667126 | MS.gene54043:intron | 10.0% |
| !!! | TAAAAATTATGTTTTTGTTT+GGG | + | chr1.2:10667108-10667127 | MS.gene54043:intron | 10.0% |
| !! | ACAAATAAACATTATATAGT+TGG | + | chr1.2:10669699-10669718 | MS.gene54043:intron | 15.0% |
| !! | AGAAAAAAAAATATGGAAAT+AGG | + | chr1.2:10666581-10666600 | MS.gene54043:intron | 15.0% |
| !! | GAAAAAAAAATATGGAAATA+GGG | + | chr1.2:10666582-10666601 | MS.gene54043:intron | 15.0% |
| !!! | AATTATGATTAATCTTGTTT+TGG | + | chr1.2:10667183-10667202 | MS.gene54043:intron | 15.0% |
| !!! | ATAATTTTTAACCTTGAAAA+AGG | - | chr1.2:10668524-10668543 | None:intergenic | 15.0% |
| !! | AAAATACCACAATAAAACAT+TGG | - | chr1.2:10668950-10668969 | None:intergenic | 20.0% |
| !! | AAAATATCACCAAGTTAAAA+TGG | + | chr1.2:10669552-10669571 | MS.gene54043:intron | 20.0% |
| !! | AAACACAAATAAACTATTGT+TGG | + | chr1.2:10667050-10667069 | MS.gene54043:intron | 20.0% |
| !! | AAATAATGTATATGCAGAAA+TGG | + | chr1.2:10669805-10669824 | MS.gene54043:CDS | 20.0% |
| !! | AAATATCACCAAGTTAAAAT+GGG | + | chr1.2:10669553-10669572 | MS.gene54043:intron | 20.0% |
| !! | AAATTAACATAAATCACATG+CGG | - | chr1.2:10669728-10669747 | None:intergenic | 20.0% |
| !! | AATAAACATTATATAGTTGG+AGG | + | chr1.2:10669702-10669721 | MS.gene54043:intron | 20.0% |
| !! | AATAACTTCGGAAAATATTA+TGG | + | chr1.2:10667868-10667887 | MS.gene54043:intron | 20.0% |
| !! | AATATATCTGCAACATTAAA+CGG | - | chr1.2:10668356-10668375 | None:intergenic | 20.0% |
| !! | ATTTCTGCATATACATTATT+TGG | - | chr1.2:10669806-10669825 | None:intergenic | 20.0% |
| !! | CTAATATACAGACATAATAA+AGG | - | chr1.2:10669670-10669689 | None:intergenic | 20.0% |
| !! | GCTTAGTATGAAAAATTTAA+AGG | - | chr1.2:10669393-10669412 | None:intergenic | 20.0% |
| !! | GTAAATATGCTTATTAAGTA+CGG | - | chr1.2:10669648-10669667 | None:intergenic | 20.0% |
| !! | TAAATTGAATTCTCAAAAGT+TGG | - | chr1.2:10666881-10666900 | None:intergenic | 20.0% |
| !! | TAGCAAAAAGATTATCATAT+TGG | - | chr1.2:10668495-10668514 | None:intergenic | 20.0% |
| !! | TAGTTATTATTGTCACTATT+TGG | + | chr1.2:10669414-10669433 | MS.gene54043:intron | 20.0% |
| !! | TGGCACTTTAATAATATATA+TGG | - | chr1.2:10667368-10667387 | None:intergenic | 20.0% |
| !! | TTAATTGAATATAAACGTGT+CGG | + | chr1.2:10668173-10668192 | MS.gene54043:intron | 20.0% |
| !!! | AAAGCATTATTACAAAAAGT+AGG | - | chr1.2:10669007-10669026 | None:intergenic | 20.0% |
| !!! | AATATGAATCTGTTTTGTTT+GGG | + | chr1.2:10669926-10669945 | MS.gene54043:CDS | 20.0% |
| !!! | ATTCTAAGGTATAAAATAGT+AGG | - | chr1.2:10669105-10669124 | None:intergenic | 20.0% |
| !!! | ATTTTTCTTAATGATCATGT+AGG | + | chr1.2:10668965-10668984 | MS.gene54043:intron | 20.0% |
| !!! | TAACTTGATTTTTCATGTAA+AGG | + | chr1.2:10666473-10666492 | MS.gene54043:intron | 20.0% |
| !!! | TGCTTAATTTTCTTGAAATT+TGG | + | chr1.2:10667976-10667995 | MS.gene54043:intron | 20.0% |
| !!! | TTTTTCTTAATGATCATGTA+GGG | + | chr1.2:10668966-10668985 | MS.gene54043:intron | 20.0% |
| !!! | TTTTTGTAATAATGCTTTTG+TGG | + | chr1.2:10669009-10669028 | MS.gene54043:intron | 20.0% |
| ! | AAGTATGTTCATAAGAAACT+TGG | - | chr1.2:10669624-10669643 | None:intergenic | 25.0% |
| ! | AGTATGTTCATAAGAAACTT+GGG | - | chr1.2:10669623-10669642 | None:intergenic | 25.0% |
| ! | ATATATCTGCAACATTAAAC+GGG | - | chr1.2:10668355-10668374 | None:intergenic | 25.0% |
| ! | ATTATTCATAAAGCTTGTCA+AGG | - | chr1.2:10666774-10666793 | None:intergenic | 25.0% |
| ! | ATTTATTGAAATCACAGACA+TGG | - | chr1.2:10667020-10667039 | None:intergenic | 25.0% |
| ! | GAACTCTTCATATTGAAATA+AGG | + | chr1.2:10668044-10668063 | MS.gene54043:intron | 25.0% |
| ! | GGTATTAAACAGGTAAATAT+TGG | - | chr1.2:10668452-10668471 | None:intergenic | 25.0% |
| ! | TAATGTCATAGTAATATGCA+TGG | - | chr1.2:10667388-10667407 | None:intergenic | 25.0% |
| ! | TATGTAAGTATTTATCTCAG+AGG | + | chr1.2:10668233-10668252 | MS.gene54043:intron | 25.0% |
| ! | TCAAAAATAAGTCAATCCAA+AGG | + | chr1.2:10666835-10666854 | MS.gene54043:intron | 25.0% |
| ! | TTCAAAATTAACTTCTGCTT+CGG | - | chr1.2:10669846-10669865 | None:intergenic | 25.0% |
| !! | AAGATTATCATATTGGTGTT+AGG | - | chr1.2:10668488-10668507 | None:intergenic | 25.0% |
| !!! | AATAAACTATTGTTGGTTTC+TGG | + | chr1.2:10667057-10667076 | MS.gene54043:intron | 25.0% |
| !!! | CTGTGTTGATTATTTTTCAT+GGG | + | chr1.2:10667131-10667150 | MS.gene54043:intron | 25.0% |
| !!! | GAATATGAATCTGTTTTGTT+TGG | + | chr1.2:10669925-10669944 | MS.gene54043:CDS | 25.0% |
| !!! | GTTGTGTTGATTATTTTTCA+TGG | + | chr1.2:10666984-10667003 | MS.gene54043:intron | 25.0% |
| !!! | TAAAATGGGTAATTTGCTTT+GGG | + | chr1.2:10669567-10669586 | MS.gene54043:intron | 25.0% |
| !!! | TTAAAATGGGTAATTTGCTT+TGG | + | chr1.2:10669566-10669585 | MS.gene54043:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+AGG | - | chr1.2:10666650-10666669 | None:intergenic | 30.0% | |
| AAAAATATGGAAATAGGGTC+TGG | + | chr1.2:10666587-10666606 | MS.gene54043:intron | 30.0% | |
| AAAATGTTCCTTGAAAAACC+AGG | - | chr1.2:10669445-10669464 | None:intergenic | 30.0% | |
| AAATGTTCCTTGAAAAACCA+GGG | - | chr1.2:10669444-10669463 | None:intergenic | 30.0% | |
| ACAATTAACAATGTGAACTG+AGG | + | chr1.2:10667604-10667623 | MS.gene54043:intron | 30.0% | |
| ATAACTAACCCATTAGCATA+TGG | - | chr1.2:10669365-10669384 | None:intergenic | 30.0% | |
| CAAGGCTCAAATGAAAATAA+AGG | - | chr1.2:10668910-10668929 | None:intergenic | 30.0% | |
| CAGAGATAAGCATAATTCTA+AGG | - | chr1.2:10669119-10669138 | None:intergenic | 30.0% | |
| GACTTAAATATGAAGAGTTG+AGG | - | chr1.2:10667476-10667495 | None:intergenic | 30.0% | |
| GTATGTTCATAAGAAACTTG+GGG | - | chr1.2:10669622-10669641 | None:intergenic | 30.0% | |
| TACATGAATCAAACATCACA+AGG | - | chr1.2:10668023-10668042 | None:intergenic | 30.0% | |
| TATATGCAGAAATGGCATTA+GGG | + | chr1.2:10669813-10669832 | MS.gene54043:CDS | 30.0% | |
| TCATTTCTCTTATGGTTGTT+AGG | + | chr1.2:10669156-10669175 | MS.gene54043:intron | 30.0% | |
| TCATTTGTATTGTGTGTAAC+AGG | + | chr1.2:10668644-10668663 | MS.gene54043:intron | 30.0% | |
| TTCTCATAAATCTAGTCACA+TGG | + | chr1.2:10668580-10668599 | MS.gene54043:intron | 30.0% | |
| TTGGAATCTTCAATTTCTCA+TGG | + | chr1.2:10667202-10667221 | MS.gene54043:intron | 30.0% | |
| ! | GATTGGTGGTTAAATAACTT+CGG | + | chr1.2:10667856-10667875 | MS.gene54043:intron | 30.0% |
| ! | TATCCATGTCATTTCTCTTA+TGG | + | chr1.2:10669148-10669167 | MS.gene54043:intron | 30.0% |
| !! | AGTTGGCATCTTTAAGATTA+AGG | - | chr1.2:10666864-10666883 | None:intergenic | 30.0% |
| !! | GTTGGCATCTTTAAGATTAA+GGG | - | chr1.2:10666863-10666882 | None:intergenic | 30.0% |
| !!! | CTTTATTTTCATTTGAGCCT+TGG | + | chr1.2:10668908-10668927 | MS.gene54043:intron | 30.0% |
| !!! | GCAAATTACCCATTTTAACT+TGG | - | chr1.2:10669564-10669583 | None:intergenic | 30.0% |
| !!! | GCTGTGTTGATTATTTTTCA+TGG | + | chr1.2:10667130-10667149 | MS.gene54043:intron | 30.0% |
| !!! | TCATTTTTTCAAAGTATCGC+CGG | - | chr1.2:10668152-10668171 | None:intergenic | 30.0% |
| AAAACATCCACACCATCAAA+AGG | - | chr1.2:10666615-10666634 | None:intergenic | 35.0% | |
| AAACACGAAATTCATCCTCA+AGG | - | chr1.2:10666336-10666355 | None:intergenic | 35.0% | |
| AACATCACAAGGCTATATCA+AGG | - | chr1.2:10668012-10668031 | None:intergenic | 35.0% | |
| AACGGGTAACAAAAAAGCTT+TGG | - | chr1.2:10668338-10668357 | None:intergenic | 35.0% | |
| ACATACTGTCTTCAAACTGA+AGG | - | chr1.2:10668403-10668422 | None:intergenic | 35.0% | |
| ATGTTGTGTTTGCAGTGTTT+GGG | + | chr1.2:10667225-10667244 | MS.gene54043:intron | 35.0% | |
| CAACCATAAGAGAAATGACA+TGG | - | chr1.2:10669154-10669173 | None:intergenic | 35.0% | |
| CCAATACAACAGTAAAACTC+AGG | - | chr1.2:10669958-10669977 | None:intergenic | 35.0% | |
| GAAAACGTCAGTATCAAACA+CGG | + | chr1.2:10668545-10668564 | MS.gene54043:intron | 35.0% | |
| GTATATGCAGAAATGGCATT+AGG | + | chr1.2:10669812-10669831 | MS.gene54043:CDS | 35.0% | |
| TCAGTGAGAGCAATTATTGA+GGG | + | chr1.2:10669869-10669888 | MS.gene54043:CDS | 35.0% | |
| TGTCTCTACATGAAGTCAAA+GGG | - | chr1.2:10667587-10667606 | None:intergenic | 35.0% | |
| TTCTCTTATGGTTGTTAGGT+TGG | + | chr1.2:10669160-10669179 | MS.gene54043:intron | 35.0% | |
| TTGAAGACAGTATGTTTGCA+GGG | + | chr1.2:10668408-10668427 | MS.gene54043:intron | 35.0% | |
| TTGTCTCTACATGAAGTCAA+AGG | - | chr1.2:10667588-10667607 | None:intergenic | 35.0% | |
| TTTGAAGACAGTATGTTTGC+AGG | + | chr1.2:10668407-10668426 | MS.gene54043:intron | 35.0% | |
| ! | AAGTCAATAAAAGCATAGCC+AGG | - | chr1.2:10667265-10667284 | None:intergenic | 35.0% |
| ! | CCTGAGTTTTACTGTTGTAT+TGG | + | chr1.2:10669955-10669974 | MS.gene54043:CDS | 35.0% |
| ! | CTTTCTCACAATTCTAGAAG+TGG | + | chr1.2:10668689-10668708 | MS.gene54043:CDS | 35.0% |
| ! | GAGGATGAATTTCGTGTTTT+TGG | + | chr1.2:10666337-10666356 | MS.gene54043:CDS | 35.0% |
| ! | GATTTGAAGTGTTATGAGTG+TGG | + | chr1.2:10668761-10668780 | MS.gene54043:CDS | 35.0% |
| ! | TCTGATAAGTTTTCGATTGG+TGG | + | chr1.2:10667842-10667861 | MS.gene54043:intron | 35.0% |
| ! | TGCTCTGATAAGTTTTCGAT+TGG | + | chr1.2:10667839-10667858 | MS.gene54043:intron | 35.0% |
| ! | TTGAGGGAATAGTGAGATTT+TGG | + | chr1.2:10669885-10669904 | MS.gene54043:CDS | 35.0% |
| ! | TTTGTTTCTTAGTGCCTGTT+TGG | + | chr1.2:10666633-10666652 | MS.gene54043:intron | 35.0% |
| !! | GTGAGATTTTGGTCATTTAG+TGG | + | chr1.2:10669896-10669915 | MS.gene54043:CDS | 35.0% |
| !! | TACTTACATACTCTGAAGCA+CGG | - | chr1.2:10668223-10668242 | None:intergenic | 35.0% |
| !! | TCTGAGAGTTTTATGAGAAG+CGG | + | chr1.2:10666923-10666942 | MS.gene54043:intron | 35.0% |
| !! | TGCTAGATGTTCCTTTTTCA+AGG | + | chr1.2:10668510-10668529 | MS.gene54043:intron | 35.0% |
| !! | TTGGCACCAATGTTTTATTG+TGG | + | chr1.2:10668941-10668960 | MS.gene54043:intron | 35.0% |
| !!! | GTGTTTTTGGTGTAATTCGA+AGG | + | chr1.2:10666350-10666369 | MS.gene54043:CDS | 35.0% |
| !!! | TTGTTTTTTCACCCCTTTTC+CGG | + | chr1.2:10667430-10667449 | MS.gene54043:intron | 35.0% |
| ACAGTATGTTTGCAGGGTTA+TGG | + | chr1.2:10668414-10668433 | MS.gene54043:intron | 40.0% | |
| GACACAGCTAGGTATTAAAC+AGG | - | chr1.2:10668462-10668481 | None:intergenic | 40.0% | |
| GATGTTGTGTTTGCAGTGTT+TGG | + | chr1.2:10667224-10667243 | MS.gene54043:intron | 40.0% | |
| GCTACACTTCTCTTGCATAA+CGG | + | chr1.2:10667658-10667677 | MS.gene54043:intron | 40.0% | |
| GGGACATATATACAGAACAC+AGG | - | chr1.2:10667806-10667825 | None:intergenic | 40.0% | |
| GTCAGTGAGAGCAATTATTG+AGG | + | chr1.2:10669868-10669887 | MS.gene54043:CDS | 40.0% | |
| TCATAAGAAACTTGGGGTCT+TGG | - | chr1.2:10669616-10669635 | None:intergenic | 40.0% | |
| TGAACATATCGACCGGAAAA+GGG | - | chr1.2:10667445-10667464 | None:intergenic | 40.0% | |
| TGATATGGATATGTCGACAC+CGG | + | chr1.2:10668130-10668149 | MS.gene54043:intron | 40.0% | |
| TGCTACTGCAATTAACCTGT+CGG | + | chr1.2:10667766-10667785 | MS.gene54043:intron | 40.0% | |
| TGTCTTCAAACTGAAGGTCT+CGG | - | chr1.2:10668397-10668416 | None:intergenic | 40.0% | |
| TTCTTAGTGCCTGTTTGGAT+TGG | + | chr1.2:10666638-10666657 | MS.gene54043:intron | 40.0% | |
| TTGTGTGTAACAGGCAAGAA+TGG | + | chr1.2:10668653-10668672 | MS.gene54043:intron | 40.0% | |
| ! | AATATAAACGTGTCGGTGTC+GGG | + | chr1.2:10668180-10668199 | MS.gene54043:intron | 40.0% |
| ! | GAATATAAACGTGTCGGTGT+CGG | + | chr1.2:10668179-10668198 | MS.gene54043:intron | 40.0% |
| ! | GTCTTTCTTTTGTATGCACC+AGG | + | chr1.2:10669237-10669256 | MS.gene54043:intron | 40.0% |
| ! | TATCTTCTGCCGCTATCTTT+TGG | + | chr1.2:10669590-10669609 | MS.gene54043:intron | 40.0% |
| ! | TCAATAAAAGCATAGCCAGG+TGG | - | chr1.2:10667262-10667281 | None:intergenic | 40.0% |
| ! | TCTCACAATTCTAGAAGTGG+TGG | + | chr1.2:10668692-10668711 | MS.gene54043:CDS | 40.0% |
| ! | TTTTCCGGTCGATATGTTCA+CGG | + | chr1.2:10667445-10667464 | MS.gene54043:intron | 40.0% |
| !! | CTGAGAGTTTTATGAGAAGC+GGG | + | chr1.2:10666924-10666943 | MS.gene54043:intron | 40.0% |
| !! | TTTAAGATTAAGGGCGCCTT+TGG | - | chr1.2:10666854-10666873 | None:intergenic | 40.0% |
| AAAGCCGTGAACATATCGAC+CGG | - | chr1.2:10667452-10667471 | None:intergenic | 45.0% | |
| AACAGGCAAGAATGGTTGGA+GGG | + | chr1.2:10668661-10668680 | MS.gene54043:intron | 45.0% | |
| ACTGAGGATTTGCACTGCTT+TGG | + | chr1.2:10667620-10667639 | MS.gene54043:intron | 45.0% | |
| ATTAACTTCTGCTTCGGCGT+CGG | - | chr1.2:10669840-10669859 | None:intergenic | 45.0% | |
| CACTGGACACAACACTGATA+TGG | + | chr1.2:10668115-10668134 | MS.gene54043:intron | 45.0% | |
| CTGAGGATTTGCACTGCTTT+GGG | + | chr1.2:10667621-10667640 | MS.gene54043:intron | 45.0% | |
| GAACATATCGACCGGAAAAG+GGG | - | chr1.2:10667444-10667463 | None:intergenic | 45.0% | |
| GATGCTATACGCGATCTAGA+TGG | + | chr1.2:10667307-10667326 | MS.gene54043:CDS | 45.0% | |
| GTGAACATATCGACCGGAAA+AGG | - | chr1.2:10667446-10667465 | None:intergenic | 45.0% | |
| GTGCCAATACAATTGCACCA+AGG | - | chr1.2:10668928-10668947 | None:intergenic | 45.0% | |
| GTGTAACAGGCAAGAATGGT+TGG | + | chr1.2:10668657-10668676 | MS.gene54043:intron | 45.0% | |
| GTGTTAGGTTTGACACAGCT+AGG | - | chr1.2:10668473-10668492 | None:intergenic | 45.0% | |
| GTTATGGGCGAAGGTTAGAT+TGG | + | chr1.2:10668882-10668901 | MS.gene54043:intron | 45.0% | |
| TAACAGGCAAGAATGGTTGG+AGG | + | chr1.2:10668660-10668679 | MS.gene54043:intron | 45.0% | |
| TCTAACCTTCGCCCATAACT+TGG | - | chr1.2:10668881-10668900 | None:intergenic | 45.0% | |
| TGAGGATTTGCACTGCTTTG+GGG | + | chr1.2:10667622-10667641 | MS.gene54043:intron | 45.0% | |
| TGCGACATTCACGAGCAAAA+TGG | - | chr1.2:10668796-10668815 | None:intergenic | 45.0% | |
| TGTTATGAGTGTGGTGAACC+TGG | + | chr1.2:10668770-10668789 | MS.gene54043:CDS | 45.0% | |
| TTCGCAGGAGTCCAAGTTAT+GGG | + | chr1.2:10668867-10668886 | MS.gene54043:CDS | 45.0% | |
| TTTCGCAGGAGTCCAAGTTA+TGG | + | chr1.2:10668866-10668885 | MS.gene54043:CDS | 45.0% | |
| ! | CACAATTCTAGAAGTGGTGG+TGG | + | chr1.2:10668695-10668714 | MS.gene54043:CDS | 45.0% |
| ! | CAGAGCACAATTTGCTCAGA+GGG | - | chr1.2:10667826-10667845 | None:intergenic | 45.0% |
| ! | GAGCCTTGGTGCAATTGTAT+TGG | + | chr1.2:10668922-10668941 | MS.gene54043:intron | 45.0% |
| ! | TCAGAGCACAATTTGCTCAG+AGG | - | chr1.2:10667827-10667846 | None:intergenic | 45.0% |
| !! | AATTCTAGAAGTGGTGGTGG+CGG | + | chr1.2:10668698-10668717 | MS.gene54043:CDS | 45.0% |
| !! | AGGAGGTGCCATATGCTAAT+GGG | + | chr1.2:10669354-10669373 | MS.gene54043:CDS | 45.0% |
| !! | GGATTCTAGAGTCTCAGAGA+GGG | + | chr1.2:10666309-10666328 | MS.gene54043:CDS | 45.0% |
| !! | TGGATTCTAGAGTCTCAGAG+AGG | + | chr1.2:10666308-10666327 | MS.gene54043:CDS | 45.0% |
| CATTCACGAGCAAAATGGCC+AGG | - | chr1.2:10668791-10668810 | None:intergenic | 50.0% | |
| GGGTCTTGGCCAAAAGATAG+CGG | - | chr1.2:10669602-10669621 | None:intergenic | 50.0% | |
| GTGTAAGCTGTTCGCAGACA+TGG | + | chr1.2:10668091-10668110 | MS.gene54043:intron | 50.0% | |
| TAGCATCCTGTGCATCTCTG+CGG | - | chr1.2:10667294-10667313 | None:intergenic | 50.0% | |
| TCGTGTGTACGTGGGTAATC+TGG | + | chr1.2:10666288-10666307 | MS.gene54043:CDS | 50.0% | |
| TGCTACTGCAATTAACCCGC+CGG | + | chr1.2:10667700-10667719 | MS.gene54043:intron | 50.0% | |
| TGTCACTATTTGGACAGCCC+TGG | + | chr1.2:10669424-10669443 | MS.gene54043:intron | 50.0% | |
| ! | ATGCAAGAGAAGTGTAGCGC+CGG | - | chr1.2:10667722-10667741 | None:intergenic | 50.0% |
| ! | TAGGGTCTGGTGCCTTTTGA+TGG | + | chr1.2:10666600-10666619 | MS.gene54043:intron | 50.0% |
| !! | ATGAGAAGCGGGTTAGTGAG+TGG | + | chr1.2:10666935-10666954 | MS.gene54043:intron | 50.0% |
| !! | GAGGAGGTGCCATATGCTAA+TGG | + | chr1.2:10669353-10669372 | MS.gene54043:CDS | 50.0% |
| !! | TGAGAAGCGGGTTAGTGAGT+GGG | + | chr1.2:10666936-10666955 | MS.gene54043:intron | 50.0% |
| !! | TGGACAGCCCTGGTTTTTCA+AGG | + | chr1.2:10669434-10669453 | MS.gene54043:intron | 50.0% |
| !!! | TCTGGTGCCTTTTGATGGTG+TGG | + | chr1.2:10666605-10666624 | MS.gene54043:intron | 50.0% |
| ACCAGGAGTTACAGTCCTCG+TGG | + | chr1.2:10669254-10669273 | MS.gene54043:intron | 55.0% | |
| AGTCTCAGAGAGGGACCTTG+AGG | + | chr1.2:10666318-10666337 | MS.gene54043:CDS | 55.0% | |
| CCAGGAGTTACAGTCCTCGT+GGG | + | chr1.2:10669255-10669274 | MS.gene54043:intron | 55.0% | |
| CGTGAATGTCGCAATCGTGG+TGG | + | chr1.2:10668803-10668822 | MS.gene54043:CDS | 55.0% | |
| CTGTTCGCAGACATGGACAC+TGG | + | chr1.2:10668098-10668117 | MS.gene54043:intron | 55.0% | |
| CTTGGACTCCTGCGAAATCG+AGG | - | chr1.2:10668863-10668882 | None:intergenic | 55.0% | |
| GAACACAGGCAGCACTCACA+TGG | - | chr1.2:10667792-10667811 | None:intergenic | 55.0% | |
| GAATGTCGCAATCGTGGTGG+TGG | + | chr1.2:10668806-10668825 | MS.gene54043:CDS | 55.0% | |
| GCTCGTGAATGTCGCAATCG+TGG | + | chr1.2:10668800-10668819 | MS.gene54043:CDS | 55.0% | |
| GGAGTCCAAGTTATGGGCGA+AGG | + | chr1.2:10668873-10668892 | MS.gene54043:CDS | 55.0% | |
| TGATGACCGCAGAGATGCAC+AGG | + | chr1.2:10667285-10667304 | MS.gene54043:CDS | 55.0% | |
| TGCAAGCAGCTCTGCAGTAG+TGG | + | chr1.2:10667523-10667542 | MS.gene54043:intron | 55.0% | |
| ! | GCACGGACACCTCTAGGAAT+AGG | - | chr1.2:10668206-10668225 | None:intergenic | 55.0% |
| ! | TCTGAAGCACGGACACCTCT+AGG | - | chr1.2:10668212-10668231 | None:intergenic | 55.0% |
| !! | TGCGAAATCGAGGTGGACTG+CGG | - | chr1.2:10668853-10668872 | None:intergenic | 55.0% |
| AGGTCACCACCTCCTTACCG+TGG | + | chr1.2:10669326-10669345 | MS.gene54043:CDS | 60.0% | |
| CCCACGAGGACTGTAACTCC+TGG | - | chr1.2:10669258-10669277 | None:intergenic | 60.0% | |
| CTCGTGGACGTAGCTACAGC+AGG | + | chr1.2:10669306-10669325 | MS.gene54043:CDS | 60.0% | |
| CTGCTGTAGCTACGTCCACG+AGG | - | chr1.2:10669308-10669327 | None:intergenic | 60.0% | |
| GCAGTCCACCTCGATTTCGC+AGG | + | chr1.2:10668852-10668871 | MS.gene54043:CDS | 60.0% | |
| GGACTCCTGCGAAATCGAGG+TGG | - | chr1.2:10668860-10668879 | None:intergenic | 60.0% | |
| GGAGTTACAGTCCTCGTGGG+CGG | + | chr1.2:10669258-10669277 | MS.gene54043:intron | 60.0% | |
| GGTCACCACCTCCTTACCGT+GGG | + | chr1.2:10669327-10669346 | MS.gene54043:CDS | 60.0% | |
| TGGGTTGCTCGAAGACCACC+TGG | + | chr1.2:10667244-10667263 | MS.gene54043:CDS | 60.0% | |
| ! | CAAGAGAAGTGTAGCGCCGG+CGG | - | chr1.2:10667719-10667738 | None:intergenic | 60.0% |
| ! | GGTGTCGGGCCTATTCCTAG+AGG | + | chr1.2:10668194-10668213 | MS.gene54043:intron | 60.0% |
| !! | AAGAGAAGTGTAGCGCCGGC+GGG | - | chr1.2:10667718-10667737 | None:intergenic | 60.0% |
| !! | AATCGTGGTGGTGGTGGTGC+AGG | + | chr1.2:10668815-10668834 | MS.gene54043:CDS | 60.0% |
| !! | ATCGAGGTGGACTGCGGCTA+CGG | - | chr1.2:10668847-10668866 | None:intergenic | 60.0% |
| !! | TCTAGAAGTGGTGGTGGCGG+CGG | + | chr1.2:10668701-10668720 | MS.gene54043:CDS | 60.0% |
| !! | TGTCGCAATCGTGGTGGTGG+TGG | + | chr1.2:10668809-10668828 | MS.gene54043:CDS | 60.0% |
| ACCTCCTCACGCCCACGGTA+AGG | - | chr1.2:10669341-10669360 | None:intergenic | 65.0% | |
| ACCTCCTTACCGTGGGCGTG+AGG | + | chr1.2:10669334-10669353 | MS.gene54043:CDS | 65.0% | |
| ATGGCACCTCCTCACGCCCA+CGG | - | chr1.2:10669346-10669365 | None:intergenic | 65.0% | |
| GCAGCACTCACATGGCCGAC+AGG | - | chr1.2:10667784-10667803 | None:intergenic | 65.0% | |
| GTCCACGAGGTGACACGCTG+CGG | - | chr1.2:10669295-10669314 | None:intergenic | 65.0% | |
| TCACGCCCACGGTAAGGAGG+TGG | - | chr1.2:10669335-10669354 | None:intergenic | 65.0% | |
| TCCTCACGCCCACGGTAAGG+AGG | - | chr1.2:10669338-10669357 | None:intergenic | 65.0% | |
| TCCTTACCGTGGGCGTGAGG+AGG | + | chr1.2:10669337-10669356 | MS.gene54043:CDS | 65.0% | |
| GGTGGAGGTCGTGGTCGTGG+CGG | + | chr1.2:10668728-10668747 | MS.gene54043:CDS | 70.0% | |
| !! | AGAAGTGGTGGTGGCGGCGG+CGG | + | chr1.2:10668704-10668723 | MS.gene54043:CDS | 70.0% |
| !! | GGTGGTGGAGGTCGTGGTCG+TGG | + | chr1.2:10668725-10668744 | MS.gene54043:CDS | 70.0% |
| AGGTGACACGCTGCGGCGCC+TGG | - | chr1.2:10669288-10669307 | None:intergenic | 75.0% | |
| CGCCGCAGCGTGTCACCTCG+TGG | + | chr1.2:10669290-10669309 | MS.gene54043:CDS | 75.0% | |
| GGAGGTCGTGGTCGTGGCGG+CGG | + | chr1.2:10668731-10668750 | MS.gene54043:CDS | 75.0% | |
| GGTGACACGCTGCGGCGCCT+GGG | - | chr1.2:10669287-10669306 | None:intergenic | 75.0% | |
| GTGACACGCTGCGGCGCCTG+GGG | - | chr1.2:10669286-10669305 | None:intergenic | 75.0% | |
| TGACACGCTGCGGCGCCTGG+GGG | - | chr1.2:10669285-10669304 | None:intergenic | 75.0% | |
| ! | GGTCGTGGTCGTGGCGGCGG+CGG | + | chr1.2:10668734-10668753 | MS.gene54043:CDS | 80.0% |
| ! | GTCCTCGTGGGCGGTCCCCC+AGG | + | chr1.2:10669267-10669286 | MS.gene54043:CDS | 80.0% |
| !!! | AGTGGTGGTGGCGGCGGCGG+TGG | + | chr1.2:10668707-10668726 | MS.gene54043:CDS | 80.0% |
| !!! | GGCGGCGGTGGTGGAGGTCG+TGG | + | chr1.2:10668719-10668738 | MS.gene54043:CDS | 80.0% |
| ! | CGCCTGGGGGACCGCCCACG+AGG | - | chr1.2:10669272-10669291 | None:intergenic | 85.0% |
| !! | GGTGGCGGCGGCGGTGGTGG+AGG | + | chr1.2:10668713-10668732 | MS.gene54043:CDS | 85.0% |
| !!! | GGTGGTGGCGGCGGCGGTGG+TGG | + | chr1.2:10668710-10668729 | MS.gene54043:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 10666283 | 10669994 | 10666283 | ID=MS.gene54043 |
| chr1.2 | mRNA | 10666283 | 10669994 | 10666283 | ID=MS.gene54043.t1;Parent=MS.gene54043 |
| chr1.2 | exon | 10666283 | 10666371 | 10666283 | ID=MS.gene54043.t1.exon1;Parent=MS.gene54043.t1 |
| chr1.2 | CDS | 10666283 | 10666371 | 10666283 | ID=cds.MS.gene54043.t1;Parent=MS.gene54043.t1 |
| chr1.2 | exon | 10667240 | 10667328 | 10667240 | ID=MS.gene54043.t1.exon2;Parent=MS.gene54043.t1 |
| chr1.2 | CDS | 10667240 | 10667328 | 10667240 | ID=cds.MS.gene54043.t1;Parent=MS.gene54043.t1 |
| chr1.2 | exon | 10668666 | 10668894 | 10668666 | ID=MS.gene54043.t1.exon3;Parent=MS.gene54043.t1 |
| chr1.2 | CDS | 10668666 | 10668894 | 10668666 | ID=cds.MS.gene54043.t1;Parent=MS.gene54043.t1 |
| chr1.2 | exon | 10669259 | 10669375 | 10669259 | ID=MS.gene54043.t1.exon4;Parent=MS.gene54043.t1 |
| chr1.2 | CDS | 10669259 | 10669375 | 10669259 | ID=cds.MS.gene54043.t1;Parent=MS.gene54043.t1 |
| chr1.2 | exon | 10669781 | 10669994 | 10669781 | ID=MS.gene54043.t1.exon5;Parent=MS.gene54043.t1 |
| chr1.2 | CDS | 10669781 | 10669994 | 10669781 | ID=cds.MS.gene54043.t1;Parent=MS.gene54043.t1 |
| Gene Sequence |
| Protein sequence |
