Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54476.t1 | XP_013447468.1 | 96.7 | 424 | 14 | 0 | 1 | 424 | 1 | 424 | 5.90E-240 | 839.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54476.t1 | Q9M884 | 59.9 | 411 | 163 | 2 | 10 | 420 | 20 | 428 | 5.7e-143 | 508.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54476.t1 | A0A072TVL2 | 96.7 | 424 | 14 | 0 | 1 | 424 | 1 | 424 | 4.2e-240 | 839.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050085 | MS.gene54476 | 0.809104 | 2.23E-50 | -1.69E-46 |
| MS.gene050277 | MS.gene54476 | 0.800577 | 1.35E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene54476 | 0.827378 | 1.62E-54 | -1.69E-46 |
| MS.gene05134 | MS.gene54476 | 0.820187 | 7.83E-53 | -1.69E-46 |
| MS.gene052302 | MS.gene54476 | 0.805701 | 1.18E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene54476 | 0.810349 | 1.20E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene54476 | 0.805967 | 1.03E-49 | -1.69E-46 |
| MS.gene053630 | MS.gene54476 | 0.801668 | 8.08E-49 | -1.69E-46 |
| MS.gene056580 | MS.gene54476 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene056760 | MS.gene54476 | 0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene057234 | MS.gene54476 | 0.806484 | 8.04E-50 | -1.69E-46 |
| MS.gene057694 | MS.gene54476 | 0.803209 | 3.89E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene54476 | 0.805141 | 1.54E-49 | -1.69E-46 |
| MS.gene058055 | MS.gene54476 | 0.813044 | 3.12E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene54476 | 0.815092 | 1.10E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54476.t1 | MTR_7g007320 | 96.698 | 424 | 14 | 0 | 1 | 424 | 1 | 424 | 0.0 | 852 |
| MS.gene54476.t1 | MTR_8g446690 | 71.186 | 59 | 16 | 1 | 161 | 218 | 206 | 264 | 1.16e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54476.t1 | AT3G02570 | 59.951 | 407 | 161 | 2 | 15 | 421 | 25 | 429 | 0.0 | 511 |
| MS.gene54476.t1 | AT1G67070 | 59.005 | 422 | 160 | 6 | 10 | 422 | 22 | 439 | 1.00e-177 | 503 |
| MS.gene54476.t1 | AT1G67070 | 59.005 | 422 | 160 | 6 | 10 | 422 | 22 | 439 | 1.00e-177 | 503 |
| MS.gene54476.t1 | AT1G67070 | 60.568 | 317 | 114 | 4 | 10 | 318 | 22 | 335 | 7.75e-131 | 380 |
Find 104 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCTACCTTTCTTGTTTA+AGG | 0.068324 | 7.4:+92236599 | MS.gene54476:CDS |
| AAGCTTTCTGAGCTTAATTC+TGG | 0.161202 | 7.4:+92236405 | MS.gene54476:CDS |
| GAACCACATGCTTATTTATC+TGG | 0.172307 | 7.4:+92239621 | MS.gene54476:CDS |
| AACACCACTGTTTCTCCTTT+TGG | 0.181112 | 7.4:-92240516 | None:intergenic |
| AGTCGGCACATCTATGAATT+TGG | 0.213240 | 7.4:-92239700 | None:intergenic |
| ATCCTAGCCAACTCCTTATC+TGG | 0.231811 | 7.4:-92237378 | None:intergenic |
| TGGATTGGTACCCATGATTC+TGG | 0.276246 | 7.4:+92236465 | MS.gene54476:CDS |
| GTGGTGTTCCCGGCTGTTCC+AGG | 0.310385 | 7.4:+92240531 | MS.gene54476:CDS |
| GTCATAAAGTTGTTAACAAA+TGG | 0.315743 | 7.4:+92236571 | MS.gene54476:CDS |
| TTCGGTGATTTCATAAACTT+TGG | 0.326384 | 7.4:-92240607 | None:intergenic |
| AATCAATATCCATCCGATAT+TGG | 0.343564 | 7.4:+92239528 | MS.gene54476:CDS |
| TTGTGGATTTATCACTCTTA+AGG | 0.363037 | 7.4:+92237485 | MS.gene54476:CDS |
| TTCTGTTAAGAATTACGATT+GGG | 0.363164 | 7.4:+92236353 | MS.gene54476:CDS |
| CATCTATGAATTTGGGAGTT+AGG | 0.363872 | 7.4:-92239692 | None:intergenic |
| AAAGGGTTAGTCTTAAAGAT+TGG | 0.368646 | 7.4:+92236520 | MS.gene54476:CDS |
| GATAACCCTGATTTGTTGCT+TGG | 0.381000 | 7.4:+92236549 | MS.gene54476:CDS |
| AGGAGAAACAGTGGTGTTCC+CGG | 0.381979 | 7.4:+92240521 | MS.gene54476:CDS |
| TTATGACCAAGCAACAAATC+AGG | 0.382854 | 7.4:-92236555 | None:intergenic |
| TTTCTTGTTTCTGATGATGA+TGG | 0.384063 | 7.4:+92236495 | MS.gene54476:CDS |
| GGGATATATTTATTTACATA+TGG | 0.387920 | 7.4:-92240456 | None:intergenic |
| AGCTGCAATCACACCAATAT+CGG | 0.389579 | 7.4:-92239541 | None:intergenic |
| CCGGAAGTTGTCGACCTAGT+TGG | 0.397551 | 7.4:+92238666 | MS.gene54476:CDS |
| TCATAAAGTTGTTAACAAAT+GGG | 0.397679 | 7.4:+92236572 | MS.gene54476:CDS |
| CCAACTAGGTCGACAACTTC+CGG | 0.398018 | 7.4:-92238666 | None:intergenic |
| GTCGGCACATCTATGAATTT+GGG | 0.403266 | 7.4:-92239699 | None:intergenic |
| AGCTGTGATTCATACCGTTC+CGG | 0.413271 | 7.4:+92238647 | MS.gene54476:CDS |
| TAAATAAGCATGTGGTTCAT+TGG | 0.413389 | 7.4:-92239616 | None:intergenic |
| AGCTTTCTGAGCTTAATTCT+GGG | 0.415899 | 7.4:+92236406 | MS.gene54476:CDS |
| TGAAGCCTTATGCTGAACTT+TGG | 0.417829 | 7.4:+92236445 | MS.gene54476:CDS |
| CTGGTGAAGCATTGTTCCTC+GGG | 0.421661 | 7.4:+92239592 | MS.gene54476:CDS |
| TAAATATATCCCGCCATTTG+AGG | 0.424847 | 7.4:+92240467 | MS.gene54476:CDS |
| GTGAACACTGCCTGTAGAAC+AGG | 0.432988 | 7.4:-92238747 | None:intergenic |
| GAGTTGCATCTGTATAGAAC+AGG | 0.435698 | 7.4:+92240684 | MS.gene54476:CDS |
| AACCACATGCTTATTTATCT+GGG | 0.445476 | 7.4:+92239622 | MS.gene54476:CDS |
| GAAAAGAAGGACCAGAATCA+TGG | 0.454156 | 7.4:-92236476 | None:intergenic |
| TCGGTGATTTCATAAACTTT+GGG | 0.454996 | 7.4:-92240606 | None:intergenic |
| TTCCCATCTTTATACACATC+AGG | 0.456949 | 7.4:-92237417 | None:intergenic |
| TGGTGTTACAAATGCGAATC+TGG | 0.458387 | 7.4:+92238686 | MS.gene54476:CDS |
| CCTTATGCTGAACTTTGGAT+TGG | 0.462431 | 7.4:+92236450 | MS.gene54476:CDS |
| CATGTATTAGGTGCTATCTG+TGG | 0.466843 | 7.4:+92237329 | MS.gene54476:intron |
| GACACTCCTCGCAGAATCTC+CGG | 0.467539 | 7.4:-92240426 | None:intergenic |
| ATGGACGGACCTGGAACAGC+CGG | 0.468574 | 7.4:-92240540 | None:intergenic |
| ATGTATTAGGTGCTATCTGT+GGG | 0.477009 | 7.4:+92237330 | MS.gene54476:intron |
| CATCCTGATGTGTATAAAGA+TGG | 0.480890 | 7.4:+92237414 | MS.gene54476:CDS |
| GTCATTGCAAGAGCCATCTC+AGG | 0.487041 | 7.4:-92237447 | None:intergenic |
| TATGAATTTGGGAGTTAGGC+CGG | 0.490147 | 7.4:-92239688 | None:intergenic |
| AATTACGATTGGGGTTTACC+TGG | 0.492223 | 7.4:+92236363 | MS.gene54476:CDS |
| CCTGGTGAAGCATTGTTCCT+CGG | 0.492483 | 7.4:+92239591 | MS.gene54476:CDS |
| CAAGGTTAAACCTGTTCTAC+AGG | 0.497471 | 7.4:+92238737 | MS.gene54476:CDS |
| TCCTAGCCAACTCCTTATCT+GGG | 0.501884 | 7.4:-92237377 | None:intergenic |
| TTGATCTCGAATTCCTCAAA+TGG | 0.502838 | 7.4:-92240480 | None:intergenic |
| TTTACCTGGTCAATTGTCAC+AGG | 0.505143 | 7.4:+92236377 | MS.gene54476:CDS |
| CCAATCCAAAGTTCAGCATA+AGG | 0.505779 | 7.4:-92236450 | None:intergenic |
| AATCGTTGTATTCTCCCAAA+AGG | 0.518187 | 7.4:+92240501 | MS.gene54476:CDS |
| ACGCTAATCTCTGTGTAAGC+AGG | 0.520732 | 7.4:-92240648 | None:intergenic |
| GTTCTGTTAAGAATTACGAT+TGG | 0.521470 | 7.4:+92236352 | MS.gene54476:CDS |
| TCACATACCTTAAACAAGAA+AGG | 0.521871 | 7.4:-92236606 | None:intergenic |
| TCATCAGAAACAAGAAAAGA+AGG | 0.521989 | 7.4:-92236489 | None:intergenic |
| AGCGAAAAGAGCATCACCTT+CGG | 0.522693 | 7.4:-92240625 | None:intergenic |
| AAGTTTCTGAAGTGAATTGT+TGG | 0.529398 | 7.4:-92236325 | None:intergenic |
| TTCTGATGATGATGGACAAA+GGG | 0.529434 | 7.4:+92236503 | MS.gene54476:CDS |
| AGTTTCTGAAGTGAATTGTT+GGG | 0.530318 | 7.4:-92236324 | None:intergenic |
| AACCACGTCAAACTCAATCC+TGG | 0.537535 | 7.4:+92239573 | MS.gene54476:CDS |
| TTCCATGCTCACATACAAGC+AGG | 0.540703 | 7.4:+92239728 | MS.gene54476:CDS |
| CACCAGGATTGAGTTTGACG+TGG | 0.544937 | 7.4:-92239575 | None:intergenic |
| CCGAGGAACAATGCTTCACC+AGG | 0.545757 | 7.4:-92239591 | None:intergenic |
| TGTGTTCATCGATCCTTCCC+CGG | 0.546008 | 7.4:-92240577 | None:intergenic |
| TATACAAGCTCACCCAGATA+AGG | 0.548295 | 7.4:+92237365 | MS.gene54476:CDS |
| TATCAATCTGTTCACAGCAT+CGG | 0.551763 | 7.4:-92238802 | None:intergenic |
| TTAGGTGCTATCTGTGGGGA+AGG | 0.554929 | 7.4:+92237335 | MS.gene54476:intron |
| TGGGAATCATAAACCTGAGA+TGG | 0.555786 | 7.4:+92237434 | MS.gene54476:CDS |
| AGAGCTGTTGGTGCTGCGGT+TGG | 0.560413 | 7.4:+92239503 | MS.gene54476:CDS |
| CATAAAGTTGTTAACAAATG+GGG | 0.561333 | 7.4:+92236573 | MS.gene54476:CDS |
| TATGACCAAGCAACAAATCA+GGG | 0.561583 | 7.4:-92236554 | None:intergenic |
| AAAAGAAGGACCAGAATCAT+GGG | 0.564262 | 7.4:-92236475 | None:intergenic |
| TCGCATTTGTAACACCAACT+AGG | 0.564979 | 7.4:-92238680 | None:intergenic |
| TCTCGAATTCCTCAAATGGC+GGG | 0.568028 | 7.4:-92240476 | None:intergenic |
| ACCCAGATAAGGAGTTGGCT+AGG | 0.574603 | 7.4:+92237376 | MS.gene54476:CDS |
| TACCTGCTTGTATGTGAGCA+TGG | 0.575867 | 7.4:-92239730 | None:intergenic |
| TCTGACAATGTTGTACGAGC+CGG | 0.581071 | 7.4:+92239669 | MS.gene54476:CDS |
| ATCTCGAATTCCTCAAATGG+CGG | 0.587651 | 7.4:-92240477 | None:intergenic |
| ATTGATAAATCGACTGCATG+AGG | 0.598903 | 7.4:+92238818 | MS.gene54476:CDS |
| TGGACGGACCTGGAACAGCC+GGG | 0.599936 | 7.4:-92240539 | None:intergenic |
| AGCTCACCCAGATAAGGAGT+TGG | 0.600443 | 7.4:+92237371 | MS.gene54476:CDS |
| GCAACCTGTGACAATTGACC+AGG | 0.605256 | 7.4:-92236381 | None:intergenic |
| GCAATCACACCAATATCGGA+TGG | 0.607190 | 7.4:-92239537 | None:intergenic |
| TGTTCTATACAGATGCAACT+CGG | 0.623473 | 7.4:-92240682 | None:intergenic |
| TGGGGAGTGTATTGAATGCA+TGG | 0.626613 | 7.4:+92239641 | MS.gene54476:CDS |
| TCGACTGCATGAGGAAAGTG+AGG | 0.627796 | 7.4:+92238827 | MS.gene54476:CDS |
| ACCACATGCTTATTTATCTG+GGG | 0.636694 | 7.4:+92239623 | MS.gene54476:CDS |
| TTTCTGATGATGATGGACAA+AGG | 0.639421 | 7.4:+92236502 | MS.gene54476:CDS |
| AAAGTTTATGAAATCACCGA+AGG | 0.643879 | 7.4:+92240609 | MS.gene54476:CDS |
| CATGTGGTTCATTGGCCCCG+AGG | 0.655973 | 7.4:-92239608 | None:intergenic |
| GTGAGCATGGAACAAAGAGT+CGG | 0.664307 | 7.4:-92239717 | None:intergenic |
| GGGGAAGGATCGATGAACAC+AGG | 0.664529 | 7.4:+92240579 | MS.gene54476:CDS |
| ATCCTGATGTGTATAAAGAT+GGG | 0.669111 | 7.4:+92237415 | MS.gene54476:CDS |
| TAGTGATCAGAATGAAGACA+AGG | 0.669229 | 7.4:+92238719 | MS.gene54476:CDS |
| TCCCCAGATAAATAAGCATG+TGG | 0.674499 | 7.4:-92239624 | None:intergenic |
| TAGGTCGACAACTTCCGGAA+CGG | 0.679265 | 7.4:-92238661 | None:intergenic |
| TCTGTTAAGAATTACGATTG+GGG | 0.690814 | 7.4:+92236354 | MS.gene54476:CDS |
| AGTTGCATCTGTATAGAACA+GGG | 0.692491 | 7.4:+92240685 | MS.gene54476:CDS |
| TCTCCCAAAAGGAGAAACAG+TGG | 0.695109 | 7.4:+92240512 | MS.gene54476:CDS |
| TGGTGAAGCATTGTTCCTCG+GGG | 0.705943 | 7.4:+92239593 | MS.gene54476:CDS |
| TGTATTAGGTGCTATCTGTG+GGG | 0.728182 | 7.4:+92237331 | MS.gene54476:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTCTAATAATTTAACTTT+AGG | - | chr7.4:92240029-92240048 | None:intergenic | 10.0% |
| !!! | ATTCTAATAATTTAACTTTA+GGG | - | chr7.4:92240028-92240047 | None:intergenic | 10.0% |
| !!! | TATTTTTAATGTTTTTTTGT+TGG | + | chr7.4:92236648-92236667 | MS.gene54476:intron | 10.0% |
| !! | AAATTATTAGAATTTACCAT+TGG | + | chr7.4:92240035-92240054 | MS.gene54476:intron | 15.0% |
| !! | TTGTTATAAAGTAAAATATG+TGG | + | chr7.4:92238075-92238094 | MS.gene54476:intron | 15.0% |
| !!! | CTAATTTTCAACTTATAATA+AGG | - | chr7.4:92237694-92237713 | None:intergenic | 15.0% |
| !!! | CTTATTATAAGTTGAAAATT+AGG | + | chr7.4:92237692-92237711 | MS.gene54476:intron | 15.0% |
| !!! | TTTTCTGTTTTTTTCTATTT+AGG | + | chr7.4:92238617-92238636 | MS.gene54476:intron | 15.0% |
| !! | AAAATCTTACTTGTAGAATA+AGG | + | chr7.4:92238517-92238536 | MS.gene54476:intron | 20.0% |
| !! | ATAAGCACTTATATGATAAA+CGG | - | chr7.4:92239117-92239136 | None:intergenic | 20.0% |
| !! | ATAATATCCAACTAACTTAA+TGG | - | chr7.4:92238971-92238990 | None:intergenic | 20.0% |
| !! | ATTTAAACAAAGAAATCCAA+GGG | - | chr7.4:92237033-92237052 | None:intergenic | 20.0% |
| !! | ATTTAGTTAACTCAAAAGTT+TGG | + | chr7.4:92238297-92238316 | MS.gene54476:intron | 20.0% |
| !! | GGGATATATTTATTTACATA+TGG | - | chr7.4:92240459-92240478 | None:intergenic | 20.0% |
| !! | GTTGTATATAGTTTATGAAA+AGG | + | chr7.4:92237285-92237304 | MS.gene54476:intron | 20.0% |
| !! | TACAATAAATCAGTAAAAGA+TGG | - | chr7.4:92238569-92238588 | None:intergenic | 20.0% |
| !! | TATATAGTTTATGAAAAGGT+TGG | + | chr7.4:92237289-92237308 | MS.gene54476:intron | 20.0% |
| !! | TATTGTAATGTTATTCTCTT+GGG | + | chr7.4:92238582-92238601 | MS.gene54476:intron | 20.0% |
| !! | TCATAAAGTTGTTAACAAAT+GGG | + | chr7.4:92236572-92236591 | MS.gene54476:CDS | 20.0% |
| !! | TTATTGTAATGTTATTCTCT+TGG | + | chr7.4:92238581-92238600 | MS.gene54476:intron | 20.0% |
| !!! | ACTTTTATAACATACATCAA+TGG | + | chr7.4:92239784-92239803 | MS.gene54476:intron | 20.0% |
| !!! | ATTATAAGTTGAAAATTAGG+TGG | + | chr7.4:92237695-92237714 | MS.gene54476:intron | 20.0% |
| !!! | GTTGTTTAGTTTTTATGAAA+AGG | + | chr7.4:92236797-92236816 | MS.gene54476:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+AGG | - | chr7.4:92239810-92239829 | None:intergenic | 20.0% |
| !!! | TTATTACAGATCTTTTTGTT+TGG | + | chr7.4:92238113-92238132 | MS.gene54476:intron | 20.0% |
| !!! | TTATTCTACAAGTAAGATTT+TGG | - | chr7.4:92238518-92238537 | None:intergenic | 20.0% |
| !!! | TTGATGTGTATTTTTTGAAA+CGG | + | chr7.4:92238167-92238186 | MS.gene54476:intron | 20.0% |
| !!! | TTGGATTTCTTTGTTTAAAT+GGG | + | chr7.4:92237033-92237052 | MS.gene54476:intron | 20.0% |
| ! | AAATTCAAATGATAACCCTT+TGG | + | chr7.4:92238032-92238051 | MS.gene54476:intron | 25.0% |
| ! | AACTAACTTAATGGAACAAA+CGG | - | chr7.4:92238962-92238981 | None:intergenic | 25.0% |
| ! | AATTGGTGTGAAATATTCAT+TGG | + | chr7.4:92236680-92236699 | MS.gene54476:intron | 25.0% |
| ! | ATGCAAAAAAACAGAACAAA+AGG | - | chr7.4:92240167-92240186 | None:intergenic | 25.0% |
| ! | ATGGATCAAAAAATTTGTAG+AGG | + | chr7.4:92239027-92239046 | MS.gene54476:intron | 25.0% |
| ! | ATTGTTAGTTAGAATATCAC+AGG | - | chr7.4:92237994-92238013 | None:intergenic | 25.0% |
| ! | CATAAAGTTGTTAACAAATG+GGG | + | chr7.4:92236573-92236592 | MS.gene54476:CDS | 25.0% |
| ! | CATTTAAACAAAGAAATCCA+AGG | - | chr7.4:92237034-92237053 | None:intergenic | 25.0% |
| ! | GATGTATGTTATAAAAGTTG+CGG | - | chr7.4:92239782-92239801 | None:intergenic | 25.0% |
| ! | GATTCATCTTTATTGAGATT+TGG | + | chr7.4:92240139-92240158 | MS.gene54476:intron | 25.0% |
| ! | GGTAGTATTTAATTATTCTG+TGG | + | chr7.4:92237506-92237525 | MS.gene54476:intron | 25.0% |
| ! | GTCATAAAGTTGTTAACAAA+TGG | + | chr7.4:92236571-92236590 | MS.gene54476:CDS | 25.0% |
| ! | TACACTTGATTACTATTCTA+AGG | + | chr7.4:92240073-92240092 | MS.gene54476:intron | 25.0% |
| ! | TATTATGAGAATAACTGAAC+TGG | + | chr7.4:92237562-92237581 | MS.gene54476:intron | 25.0% |
| ! | TGTGATATTAACTCAATTGT+AGG | + | chr7.4:92240247-92240266 | MS.gene54476:intron | 25.0% |
| ! | TTCTGTTAAGAATTACGATT+GGG | + | chr7.4:92236353-92236372 | MS.gene54476:CDS | 25.0% |
| !! | AGTTGATTAGTTAATCTGTT+TGG | + | chr7.4:92238852-92238871 | MS.gene54476:intron | 25.0% |
| !! | CTTGGATTTCTTTGTTTAAA+TGG | + | chr7.4:92237032-92237051 | MS.gene54476:intron | 25.0% |
| !! | TAACTCAAAAGTTTGGATTT+TGG | + | chr7.4:92238304-92238323 | MS.gene54476:intron | 25.0% |
| !! | TTTGTTGGTTACTATGTAAT+TGG | + | chr7.4:92236663-92236682 | MS.gene54476:intron | 25.0% |
| !!! | TATGTGATTTTGATTACTAG+TGG | + | chr7.4:92236622-92236641 | MS.gene54476:intron | 25.0% |
| !!! | TATTGTCTTATTTTCTCACA+GGG | + | chr7.4:92240399-92240418 | MS.gene54476:intron | 25.0% |
| !!! | TCTGTTGTTTTTCATGTATT+AGG | + | chr7.4:92237317-92237336 | MS.gene54476:intron | 25.0% |
| !!! | TGATGTGTATTTTTTGAAAC+GGG | + | chr7.4:92238168-92238187 | MS.gene54476:intron | 25.0% |
| !!! | TTATTGTCTTATTTTCTCAC+AGG | + | chr7.4:92240398-92240417 | MS.gene54476:intron | 25.0% |
| AAAGTTTATGAAATCACCGA+AGG | + | chr7.4:92240609-92240628 | MS.gene54476:CDS | 30.0% | |
| AACCACATGCTTATTTATCT+GGG | + | chr7.4:92239622-92239641 | MS.gene54476:CDS | 30.0% | |
| AACGGGAATAAATAGAACAT+AGG | + | chr7.4:92238185-92238204 | MS.gene54476:intron | 30.0% | |
| AAGACTGAAATAAGATCCAA+TGG | - | chr7.4:92240054-92240073 | None:intergenic | 30.0% | |
| AAGATGGTTGAATATACCAA+AGG | - | chr7.4:92238553-92238572 | None:intergenic | 30.0% | |
| AAGGAATTATACCTAACAGA+TGG | - | chr7.4:92237865-92237884 | None:intergenic | 30.0% | |
| AATCAATATCCATCCGATAT+TGG | + | chr7.4:92239528-92239547 | MS.gene54476:CDS | 30.0% | |
| ACGGGAATAAATAGAACATA+GGG | + | chr7.4:92238186-92238205 | MS.gene54476:intron | 30.0% | |
| ATCCTGATGTGTATAAAGAT+GGG | + | chr7.4:92237415-92237434 | MS.gene54476:CDS | 30.0% | |
| ATGACCAATATGAAATTCAG+AGG | - | chr7.4:92240118-92240137 | None:intergenic | 30.0% | |
| ATGCATAACCATATACTAGT+TGG | + | chr7.4:92240277-92240296 | MS.gene54476:intron | 30.0% | |
| CATGACGTGTCTTTATTAAA+AGG | + | chr7.4:92238233-92238252 | MS.gene54476:intron | 30.0% | |
| GATGCAAGATAAGAATATCA+AGG | - | chr7.4:92239461-92239480 | None:intergenic | 30.0% | |
| GATTTGATATATGTGGTCTT+AGG | + | chr7.4:92239049-92239068 | MS.gene54476:intron | 30.0% | |
| GGTTGTATTGTATCAGAAAA+AGG | - | chr7.4:92237973-92237992 | None:intergenic | 30.0% | |
| GTTCTGTTAAGAATTACGAT+TGG | + | chr7.4:92236352-92236371 | MS.gene54476:CDS | 30.0% | |
| GTTTGTTCCATTAAGTTAGT+TGG | + | chr7.4:92238961-92238980 | MS.gene54476:intron | 30.0% | |
| TAAATAAGCATGTGGTTCAT+TGG | - | chr7.4:92239619-92239638 | None:intergenic | 30.0% | |
| TCAATACAAACATAGACATC+AGG | - | chr7.4:92237218-92237237 | None:intergenic | 30.0% | |
| TCACATACCTTAAACAAGAA+AGG | - | chr7.4:92236609-92236628 | None:intergenic | 30.0% | |
| TCATCAGAAACAAGAAAAGA+AGG | - | chr7.4:92236492-92236511 | None:intergenic | 30.0% | |
| TCGGTGATTTCATAAACTTT+GGG | - | chr7.4:92240609-92240628 | None:intergenic | 30.0% | |
| TCTGAATTTCATATTGGTCA+TGG | + | chr7.4:92240117-92240136 | MS.gene54476:intron | 30.0% | |
| TCTGTTAAGAATTACGATTG+GGG | + | chr7.4:92236354-92236373 | MS.gene54476:CDS | 30.0% | |
| TCTTCCTCTGAATTTCATAT+TGG | + | chr7.4:92240111-92240130 | MS.gene54476:intron | 30.0% | |
| TGACCCTAAGAACATATTTA+GGG | - | chr7.4:92239328-92239347 | None:intergenic | 30.0% | |
| TGTAGAGGATTTGATATATG+TGG | + | chr7.4:92239042-92239061 | MS.gene54476:intron | 30.0% | |
| TTAAGTCGTTTAACCAAACA+AGG | - | chr7.4:92239075-92239094 | None:intergenic | 30.0% | |
| TTAGGGTCACATGATATTTA+TGG | + | chr7.4:92239339-92239358 | MS.gene54476:intron | 30.0% | |
| TTCACTCAGTCATATCATTA+AGG | - | chr7.4:92237884-92237903 | None:intergenic | 30.0% | |
| TTCGGTGATTTCATAAACTT+TGG | - | chr7.4:92240610-92240629 | None:intergenic | 30.0% | |
| TTGTGGATTTATCACTCTTA+AGG | + | chr7.4:92237485-92237504 | MS.gene54476:CDS | 30.0% | |
| ! | CATGGTTTCGAAATTTTGAA+CGG | + | chr7.4:92240315-92240334 | MS.gene54476:intron | 30.0% |
| ! | TGATCTACCTTTCTTGTTTA+AGG | + | chr7.4:92236599-92236618 | MS.gene54476:CDS | 30.0% |
| ! | TGTTTGTATTGATGCTTCAT+AGG | + | chr7.4:92237226-92237245 | MS.gene54476:intron | 30.0% |
| !! | AAAGGGTTAGTCTTAAAGAT+TGG | + | chr7.4:92236520-92236539 | MS.gene54476:CDS | 30.0% |
| !! | AAGTTTCTGAAGTGAATTGT+TGG | - | chr7.4:92236328-92236347 | None:intergenic | 30.0% |
| !! | AGTTTCTGAAGTGAATTGTT+GGG | - | chr7.4:92236327-92236346 | None:intergenic | 30.0% |
| !! | TGTTGATAACTAATCTGTGT+CGG | + | chr7.4:92236706-92236725 | MS.gene54476:intron | 30.0% |
| !! | TTTCTTGTTTCTGATGATGA+TGG | + | chr7.4:92236495-92236514 | MS.gene54476:CDS | 30.0% |
| !!! | GGTGTTTAGTTTTACGAAAA+AGG | + | chr7.4:92237054-92237073 | MS.gene54476:intron | 30.0% |
| AAAAGAAGGACCAGAATCAT+GGG | - | chr7.4:92236478-92236497 | None:intergenic | 35.0% | |
| AAGCTTTCTGAGCTTAATTC+TGG | + | chr7.4:92236405-92236424 | MS.gene54476:CDS | 35.0% | |
| AATCGTTGTATTCTCCCAAA+AGG | + | chr7.4:92240501-92240520 | MS.gene54476:CDS | 35.0% | |
| ACCACATGCTTATTTATCTG+GGG | + | chr7.4:92239623-92239642 | MS.gene54476:CDS | 35.0% | |
| AGAATGACAGAAATGAACCA+TGG | - | chr7.4:92238336-92238355 | None:intergenic | 35.0% | |
| AGCTTTCTGAGCTTAATTCT+GGG | + | chr7.4:92236406-92236425 | MS.gene54476:CDS | 35.0% | |
| AGGCCCTAAATATGTTCTTA+GGG | + | chr7.4:92239322-92239341 | MS.gene54476:intron | 35.0% | |
| AGTTGCATCTGTATAGAACA+GGG | + | chr7.4:92240685-92240704 | MS.gene54476:CDS | 35.0% | |
| AGTTGCTTCATTAACACCAA+AGG | - | chr7.4:92238051-92238070 | None:intergenic | 35.0% | |
| ATAAGGTTAGAGCTTACCTT+TGG | + | chr7.4:92238534-92238553 | MS.gene54476:intron | 35.0% | |
| ATTGATAAATCGACTGCATG+AGG | + | chr7.4:92238818-92238837 | MS.gene54476:CDS | 35.0% | |
| ATTTCTGTCATTCTCCAAGA+CGG | + | chr7.4:92238342-92238361 | MS.gene54476:intron | 35.0% | |
| CATCCTGATGTGTATAAAGA+TGG | + | chr7.4:92237414-92237433 | MS.gene54476:CDS | 35.0% | |
| CATCTATGAATTTGGGAGTT+AGG | - | chr7.4:92239695-92239714 | None:intergenic | 35.0% | |
| GAACCACATGCTTATTTATC+TGG | + | chr7.4:92239621-92239640 | MS.gene54476:CDS | 35.0% | |
| GATGTAACCAAAAAGATGGA+CGG | - | chr7.4:92240558-92240577 | None:intergenic | 35.0% | |
| GTGACCCTAAGAACATATTT+AGG | - | chr7.4:92239329-92239348 | None:intergenic | 35.0% | |
| GTTGCTTCATTAACACCAAA+GGG | - | chr7.4:92238050-92238069 | None:intergenic | 35.0% | |
| TAAATATATCCCGCCATTTG+AGG | + | chr7.4:92240467-92240486 | MS.gene54476:CDS | 35.0% | |
| TAGTGATCAGAATGAAGACA+AGG | + | chr7.4:92238719-92238738 | MS.gene54476:CDS | 35.0% | |
| TATCAATCTGTTCACAGCAT+CGG | - | chr7.4:92238805-92238824 | None:intergenic | 35.0% | |
| TATGACCAAGCAACAAATCA+GGG | - | chr7.4:92236557-92236576 | None:intergenic | 35.0% | |
| TCAATACTCATGAGTGTGAT+TGG | + | chr7.4:92237833-92237852 | MS.gene54476:intron | 35.0% | |
| TCAGATAAGCCAATATGAAC+AGG | + | chr7.4:92239302-92239321 | MS.gene54476:intron | 35.0% | |
| TCGACCAAAAAAGACTGTTT+AGG | - | chr7.4:92238448-92238467 | None:intergenic | 35.0% | |
| TGTTATTCTCTTGGGAGTAA+TGG | + | chr7.4:92238590-92238609 | MS.gene54476:intron | 35.0% | |
| TGTTCTATACAGATGCAACT+CGG | - | chr7.4:92240685-92240704 | None:intergenic | 35.0% | |
| TTATACACTCATTGCGAACA+TGG | + | chr7.4:92238987-92239006 | MS.gene54476:intron | 35.0% | |
| TTATGACCAAGCAACAAATC+AGG | - | chr7.4:92236558-92236577 | None:intergenic | 35.0% | |
| TTCCCATCTTTATACACATC+AGG | - | chr7.4:92237420-92237439 | None:intergenic | 35.0% | |
| TTGATCTCGAATTCCTCAAA+TGG | - | chr7.4:92240483-92240502 | None:intergenic | 35.0% | |
| TTTGACTGAAAAAGAGCTGT+TGG | + | chr7.4:92239491-92239510 | MS.gene54476:CDS | 35.0% | |
| ! | ACATTGGTCTGAGCAAAATT+GGG | - | chr7.4:92236740-92236759 | None:intergenic | 35.0% |
| ! | ATGTATTAGGTGCTATCTGT+GGG | + | chr7.4:92237330-92237349 | MS.gene54476:intron | 35.0% |
| ! | GAAATTTTGAACGGAATACG+CGG | + | chr7.4:92240324-92240343 | MS.gene54476:intron | 35.0% |
| ! | TATTTAGGGCCTGTTCATAT+TGG | - | chr7.4:92239314-92239333 | None:intergenic | 35.0% |
| ! | TATTTTCTCACAGGGTTTTC+CGG | + | chr7.4:92240407-92240426 | MS.gene54476:intron | 35.0% |
| ! | TCTTGCAATGACAGATTTTG+AGG | + | chr7.4:92237458-92237477 | MS.gene54476:CDS | 35.0% |
| ! | TTGATAACTAATCTGTGTCG+GGG | + | chr7.4:92236708-92236727 | MS.gene54476:intron | 35.0% |
| !! | CATACATCAATGGCCTTATT+TGG | + | chr7.4:92239794-92239813 | MS.gene54476:intron | 35.0% |
| !! | GTTGATAACTAATCTGTGTC+GGG | + | chr7.4:92236707-92236726 | MS.gene54476:intron | 35.0% |
| !! | TTCTGATGATGATGGACAAA+GGG | + | chr7.4:92236503-92236522 | MS.gene54476:CDS | 35.0% |
| !! | TTTCTGATGATGATGGACAA+AGG | + | chr7.4:92236502-92236521 | MS.gene54476:CDS | 35.0% |
| !!! | CTGTTTGGTTTTGAAGAGTT+TGG | + | chr7.4:92238867-92238886 | MS.gene54476:intron | 35.0% |
| !!! | GTTGCCTAAACAGTCTTTTT+TGG | + | chr7.4:92238441-92238460 | MS.gene54476:intron | 35.0% |
| !!! | TCCATCTTTTTGGTTACATC+CGG | + | chr7.4:92240558-92240577 | MS.gene54476:CDS | 35.0% |
| AAAGCAGCCGAACTTCAATT+TGG | - | chr7.4:92238144-92238163 | None:intergenic | 40.0% | |
| AACCAACCAAGCAATCTATG+TGG | - | chr7.4:92240206-92240225 | None:intergenic | 40.0% | |
| AACGGTATCCAACATCACAT+TGG | - | chr7.4:92236756-92236775 | None:intergenic | 40.0% | |
| AATTACGATTGGGGTTTACC+TGG | + | chr7.4:92236363-92236382 | MS.gene54476:CDS | 40.0% | |
| ACACCTTCAACCTCAAATGT+CGG | - | chr7.4:92236853-92236872 | None:intergenic | 40.0% | |
| ACATAGATTGCTTGGTTGGT+TGG | + | chr7.4:92240205-92240224 | MS.gene54476:intron | 40.0% | |
| AGCTGCAATCACACCAATAT+CGG | - | chr7.4:92239544-92239563 | None:intergenic | 40.0% | |
| AGTCGGCACATCTATGAATT+TGG | - | chr7.4:92239703-92239722 | None:intergenic | 40.0% | |
| ATCTCGAATTCCTCAAATGG+CGG | - | chr7.4:92240480-92240499 | None:intergenic | 40.0% | |
| ATTGGAACTGTCCATCTGTT+AGG | + | chr7.4:92237851-92237870 | MS.gene54476:intron | 40.0% | |
| CAAGGTTAAACCTGTTCTAC+AGG | + | chr7.4:92238737-92238756 | MS.gene54476:CDS | 40.0% | |
| CAGGCCCTAAATATGTTCTT+AGG | + | chr7.4:92239321-92239340 | MS.gene54476:intron | 40.0% | |
| CATGTCAATCTCATTCTCTC+TGG | + | chr7.4:92237934-92237953 | MS.gene54476:intron | 40.0% | |
| CCAATCCAAAGTTCAGCATA+AGG | - | chr7.4:92236453-92236472 | None:intergenic | 40.0% | |
| CCTTATGCTGAACTTTGGAT+TGG | + | chr7.4:92236450-92236469 | MS.gene54476:CDS | 40.0% | |
| GAAAAGAAGGACCAGAATCA+TGG | - | chr7.4:92236479-92236498 | None:intergenic | 40.0% | |
| GAGTTGCATCTGTATAGAAC+AGG | + | chr7.4:92240684-92240703 | MS.gene54476:CDS | 40.0% | |
| GCAGTATTAAAATCCCGTCT+TGG | - | chr7.4:92238359-92238378 | None:intergenic | 40.0% | |
| GGAACTGCCAAATTGAAGTT+CGG | + | chr7.4:92238134-92238153 | MS.gene54476:intron | 40.0% | |
| GTATCCGTGCTTCTTATGAT+GGG | + | chr7.4:92237002-92237021 | MS.gene54476:intron | 40.0% | |
| GTCGGCACATCTATGAATTT+GGG | - | chr7.4:92239702-92239721 | None:intergenic | 40.0% | |
| GTGTCTAACACAGTCATTGT+TGG | + | chr7.4:92236891-92236910 | MS.gene54476:intron | 40.0% | |
| GTTCTTGTCTAACAAGACAC+TGG | + | chr7.4:92237133-92237152 | MS.gene54476:intron | 40.0% | |
| TAAAGACACGTCATGTAGAG+AGG | - | chr7.4:92238228-92238247 | None:intergenic | 40.0% | |
| TATACAAGCTCACCCAGATA+AGG | + | chr7.4:92237365-92237384 | MS.gene54476:CDS | 40.0% | |
| TATCCGTGCTTCTTATGATG+GGG | + | chr7.4:92237003-92237022 | MS.gene54476:intron | 40.0% | |
| TATGAATTTGGGAGTTAGGC+CGG | - | chr7.4:92239691-92239710 | None:intergenic | 40.0% | |
| TCCCCAGATAAATAAGCATG+TGG | - | chr7.4:92239627-92239646 | None:intergenic | 40.0% | |
| TCGCATTTGTAACACCAACT+AGG | - | chr7.4:92238683-92238702 | None:intergenic | 40.0% | |
| TGAGACTGACATGTCAATAC+TGG | - | chr7.4:92239918-92239937 | None:intergenic | 40.0% | |
| TGATAACTAATCTGTGTCGG+GGG | + | chr7.4:92236709-92236728 | MS.gene54476:intron | 40.0% | |
| TGGGAATCATAAACCTGAGA+TGG | + | chr7.4:92237434-92237453 | MS.gene54476:CDS | 40.0% | |
| TGTATCCGTGCTTCTTATGA+TGG | + | chr7.4:92237001-92237020 | MS.gene54476:intron | 40.0% | |
| TGTGCATGCCAACTAGTATA+TGG | - | chr7.4:92240288-92240307 | None:intergenic | 40.0% | |
| TTCTTATCTTGCATCAGACG+AGG | + | chr7.4:92239466-92239485 | MS.gene54476:intron | 40.0% | |
| TTTACCTGGTCAATTGTCAC+AGG | + | chr7.4:92236377-92236396 | MS.gene54476:CDS | 40.0% | |
| TTTCTGTCATTCTCCAAGAC+GGG | + | chr7.4:92238343-92238362 | MS.gene54476:intron | 40.0% | |
| ! | CACATTGGTCTGAGCAAAAT+TGG | - | chr7.4:92236741-92236760 | None:intergenic | 40.0% |
| ! | CATGTATTAGGTGCTATCTG+TGG | + | chr7.4:92237329-92237348 | MS.gene54476:intron | 40.0% |
| ! | TGAAGCCTTATGCTGAACTT+TGG | + | chr7.4:92236445-92236464 | MS.gene54476:CDS | 40.0% |
| ! | TGTATTAGGTGCTATCTGTG+GGG | + | chr7.4:92237331-92237350 | MS.gene54476:intron | 40.0% |
| !! | AACACCACTGTTTCTCCTTT+TGG | - | chr7.4:92240519-92240538 | None:intergenic | 40.0% |
| !! | ACACCACTGTTTCTCCTTTT+GGG | - | chr7.4:92240518-92240537 | None:intergenic | 40.0% |
| !! | GATAACCCTGATTTGTTGCT+TGG | + | chr7.4:92236549-92236568 | MS.gene54476:CDS | 40.0% |
| !! | TGGTGTTACAAATGCGAATC+TGG | + | chr7.4:92238686-92238705 | MS.gene54476:CDS | 40.0% |
| !!! | ACAGATTTTGAGGCTCTTTG+TGG | + | chr7.4:92237468-92237487 | MS.gene54476:CDS | 40.0% |
| !!! | CATCTTTTTGGTTACATCCG+GGG | + | chr7.4:92240560-92240579 | MS.gene54476:CDS | 40.0% |
| !!! | CCATCTTTTTGGTTACATCC+GGG | + | chr7.4:92240559-92240578 | MS.gene54476:CDS | 40.0% |
| !!! | TTGGATTTTGGTCTTGTCCA+TGG | + | chr7.4:92238316-92238335 | MS.gene54476:intron | 40.0% |
| AACCACGTCAAACTCAATCC+TGG | + | chr7.4:92239573-92239592 | MS.gene54476:CDS | 45.0% | |
| ACGCTAATCTCTGTGTAAGC+AGG | - | chr7.4:92240651-92240670 | None:intergenic | 45.0% | |
| AGACTGCTTACGAGAGTTCA+TGG | - | chr7.4:92239255-92239274 | None:intergenic | 45.0% | |
| AGCGTTGCATACGTGAAACT+CGG | + | chr7.4:92240359-92240378 | MS.gene54476:intron | 45.0% | |
| AGCTGTGATTCATACCGTTC+CGG | + | chr7.4:92238647-92238666 | MS.gene54476:CDS | 45.0% | |
| ATCCTAGCCAACTCCTTATC+TGG | - | chr7.4:92237381-92237400 | None:intergenic | 45.0% | |
| CCCGGATGTAACCAAAAAGA+TGG | - | chr7.4:92240562-92240581 | None:intergenic | 45.0% | |
| CGTAAGCTAAAAGCAGCTGA+TGG | + | chr7.4:92239211-92239230 | MS.gene54476:intron | 45.0% | |
| CTCATGCCACATAGATTGCT+TGG | + | chr7.4:92240197-92240216 | MS.gene54476:intron | 45.0% | |
| GCAATCACACCAATATCGGA+TGG | - | chr7.4:92239540-92239559 | None:intergenic | 45.0% | |
| GTGAGCATGGAACAAAGAGT+CGG | - | chr7.4:92239720-92239739 | None:intergenic | 45.0% | |
| TACCTGCTTGTATGTGAGCA+TGG | - | chr7.4:92239733-92239752 | None:intergenic | 45.0% | |
| TCCTAGCCAACTCCTTATCT+GGG | - | chr7.4:92237380-92237399 | None:intergenic | 45.0% | |
| TCTCCCAAAAGGAGAAACAG+TGG | + | chr7.4:92240512-92240531 | MS.gene54476:CDS | 45.0% | |
| TCTCGAATTCCTCAAATGGC+GGG | - | chr7.4:92240479-92240498 | None:intergenic | 45.0% | |
| TCTGACAATGTTGTACGAGC+CGG | + | chr7.4:92239669-92239688 | MS.gene54476:CDS | 45.0% | |
| TGCCACATAGATTGCTTGGT+TGG | + | chr7.4:92240201-92240220 | MS.gene54476:intron | 45.0% | |
| TGCTCAGACCAATGTGATGT+TGG | + | chr7.4:92236745-92236764 | MS.gene54476:intron | 45.0% | |
| TTCCATGCTCACATACAAGC+AGG | + | chr7.4:92239728-92239747 | MS.gene54476:CDS | 45.0% | |
| ! | TGAAGGTGTGTGTGAATGTC+TGG | + | chr7.4:92236864-92236883 | MS.gene54476:intron | 45.0% |
| ! | TGGGGAGTGTATTGAATGCA+TGG | + | chr7.4:92239641-92239660 | MS.gene54476:CDS | 45.0% |
| !! | AAAAAGAGCTGTTGGTGCTG+CGG | + | chr7.4:92239499-92239518 | MS.gene54476:CDS | 45.0% |
| !! | AGCGAAAAGAGCATCACCTT+CGG | - | chr7.4:92240628-92240647 | None:intergenic | 45.0% |
| !! | ATGTGGTCTTAGGCCTTGTT+TGG | + | chr7.4:92239059-92239078 | MS.gene54476:intron | 45.0% |
| !! | CTATGTAGCACCGACATTTG+AGG | + | chr7.4:92236840-92236859 | MS.gene54476:intron | 45.0% |
| !! | TGGATTGGTACCCATGATTC+TGG | + | chr7.4:92236465-92236484 | MS.gene54476:CDS | 45.0% |
| !! | TTCTCTCTGGTTGAGTTGAG+AGG | + | chr7.4:92237947-92237966 | MS.gene54476:intron | 45.0% |
| !!! | TTTTTGGTTACATCCGGGGA+AGG | + | chr7.4:92240564-92240583 | MS.gene54476:CDS | 45.0% |
| !! | AAACAAAATAAAAATAAAAA+GGG | - | chr7.4:92237260-92237279 | None:intergenic | 5.0% |
| !! | TAAACAAAATAAAAATAAAA+AGG | - | chr7.4:92237261-92237280 | None:intergenic | 5.0% |
| !! | TTAAACAAAAAATAAATAAA+CGG | - | chr7.4:92236774-92236793 | None:intergenic | 5.0% |
| !!! | TTATTTATTTTTTGTTTAAA+TGG | + | chr7.4:92236775-92236794 | MS.gene54476:intron | 5.0% |
| !!! | TTATTTTTATTTTGTTTAAA+AGG | + | chr7.4:92237263-92237282 | MS.gene54476:intron | 5.0% |
| ACACTCATTGCGAACATGGC+AGG | + | chr7.4:92238991-92239010 | MS.gene54476:intron | 50.0% | |
| ACCAAAAAGATGGACGGACC+TGG | - | chr7.4:92240552-92240571 | None:intergenic | 50.0% | |
| ACCCAGATAAGGAGTTGGCT+AGG | + | chr7.4:92237376-92237395 | MS.gene54476:CDS | 50.0% | |
| AGCTCACCCAGATAAGGAGT+TGG | + | chr7.4:92237371-92237390 | MS.gene54476:CDS | 50.0% | |
| AGGAGAAACAGTGGTGTTCC+CGG | + | chr7.4:92240521-92240540 | MS.gene54476:CDS | 50.0% | |
| CACCAGGATTGAGTTTGACG+TGG | - | chr7.4:92239578-92239597 | None:intergenic | 50.0% | |
| CCAACTAGGTCGACAACTTC+CGG | - | chr7.4:92238669-92238688 | None:intergenic | 50.0% | |
| GCAACCTGTGACAATTGACC+AGG | - | chr7.4:92236384-92236403 | None:intergenic | 50.0% | |
| GCACCCCATCATAAGAAGCA+CGG | - | chr7.4:92237009-92237028 | None:intergenic | 50.0% | |
| GGCAGGAACTCATCAAGAGA+TGG | + | chr7.4:92239008-92239027 | MS.gene54476:intron | 50.0% | |
| GTCATTGCAAGAGCCATCTC+AGG | - | chr7.4:92237450-92237469 | None:intergenic | 50.0% | |
| GTGAACACTGCCTGTAGAAC+AGG | - | chr7.4:92238750-92238769 | None:intergenic | 50.0% | |
| TAGGTCGACAACTTCCGGAA+CGG | - | chr7.4:92238664-92238683 | None:intergenic | 50.0% | |
| TCGACTGCATGAGGAAAGTG+AGG | + | chr7.4:92238827-92238846 | MS.gene54476:CDS | 50.0% | |
| TGTGTTCATCGATCCTTCCC+CGG | - | chr7.4:92240580-92240599 | None:intergenic | 50.0% | |
| ! | GCACCGACATTTGAGGTTGA+AGG | + | chr7.4:92236847-92236866 | MS.gene54476:intron | 50.0% |
| ! | TCCAGGTCCGTCCATCTTTT+TGG | + | chr7.4:92240548-92240567 | MS.gene54476:CDS | 50.0% |
| ! | TTAGGTGCTATCTGTGGGGA+AGG | + | chr7.4:92237335-92237354 | MS.gene54476:intron | 50.0% |
| !! | CCTGGTGAAGCATTGTTCCT+CGG | + | chr7.4:92239591-92239610 | MS.gene54476:CDS | 50.0% |
| !! | CTGGTGAAGCATTGTTCCTC+GGG | + | chr7.4:92239592-92239611 | MS.gene54476:CDS | 50.0% |
| !! | TGGTGAAGCATTGTTCCTCG+GGG | + | chr7.4:92239593-92239612 | MS.gene54476:CDS | 50.0% |
| ACACGTCATGTAGAGAGGCG+TGG | - | chr7.4:92238223-92238242 | None:intergenic | 55.0% | |
| CCGAGGAACAATGCTTCACC+AGG | - | chr7.4:92239594-92239613 | None:intergenic | 55.0% | |
| CCGGAAGTTGTCGACCTAGT+TGG | + | chr7.4:92238666-92238685 | MS.gene54476:CDS | 55.0% | |
| GACACTCCTCGCAGAATCTC+CGG | - | chr7.4:92240429-92240448 | None:intergenic | 55.0% | |
| GGGGAAGGATCGATGAACAC+AGG | + | chr7.4:92240579-92240598 | MS.gene54476:CDS | 55.0% | |
| ! | CTTATGATGGGGTGCTCCCT+TGG | + | chr7.4:92237014-92237033 | MS.gene54476:intron | 55.0% |
| ! | GGTTTTCCGGAGATTCTGCG+AGG | + | chr7.4:92240420-92240439 | MS.gene54476:CDS | 55.0% |
| ATGGACGGACCTGGAACAGC+CGG | - | chr7.4:92240543-92240562 | None:intergenic | 60.0% | |
| CATGTGGTTCATTGGCCCCG+AGG | - | chr7.4:92239611-92239630 | None:intergenic | 60.0% | |
| !! | AGAGCTGTTGGTGCTGCGGT+TGG | + | chr7.4:92239503-92239522 | MS.gene54476:CDS | 60.0% |
| GTGGTGTTCCCGGCTGTTCC+AGG | + | chr7.4:92240531-92240550 | MS.gene54476:CDS | 65.0% | |
| TGGACGGACCTGGAACAGCC+GGG | - | chr7.4:92240542-92240561 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 92236309 | 92240737 | 92236309 | ID=MS.gene54476 |
| chr7.4 | mRNA | 92236309 | 92240737 | 92236309 | ID=MS.gene54476.t1;Parent=MS.gene54476 |
| chr7.4 | exon | 92236309 | 92236620 | 92236309 | ID=MS.gene54476.t1.exon1;Parent=MS.gene54476.t1 |
| chr7.4 | CDS | 92236309 | 92236620 | 92236309 | ID=cds.MS.gene54476.t1;Parent=MS.gene54476.t1 |
| chr7.4 | exon | 92237339 | 92237506 | 92237339 | ID=MS.gene54476.t1.exon2;Parent=MS.gene54476.t1 |
| chr7.4 | CDS | 92237339 | 92237506 | 92237339 | ID=cds.MS.gene54476.t1;Parent=MS.gene54476.t1 |
| chr7.4 | exon | 92238639 | 92238848 | 92238639 | ID=MS.gene54476.t1.exon3;Parent=MS.gene54476.t1 |
| chr7.4 | CDS | 92238639 | 92238848 | 92238639 | ID=cds.MS.gene54476.t1;Parent=MS.gene54476.t1 |
| chr7.4 | exon | 92239483 | 92239749 | 92239483 | ID=MS.gene54476.t1.exon4;Parent=MS.gene54476.t1 |
| chr7.4 | CDS | 92239483 | 92239749 | 92239483 | ID=cds.MS.gene54476.t1;Parent=MS.gene54476.t1 |
| chr7.4 | exon | 92240420 | 92240737 | 92240420 | ID=MS.gene54476.t1.exon5;Parent=MS.gene54476.t1 |
| chr7.4 | CDS | 92240420 | 92240737 | 92240420 | ID=cds.MS.gene54476.t1;Parent=MS.gene54476.t1 |
| Gene Sequence |
| Protein sequence |
