Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54918.t1 | XP_013442399.1 | 98.4 | 427 | 7 | 0 | 1 | 427 | 45 | 471 | 5.70E-259 | 902.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54918.t1 | Q09131 | 84.3 | 427 | 67 | 0 | 1 | 427 | 38 | 464 | 2.9e-227 | 788.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54918.t1 | A0A072TFW4 | 98.4 | 427 | 7 | 0 | 1 | 427 | 45 | 471 | 4.1e-259 | 902.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051594 | MS.gene54918 | 0.848087 | 7.66E-60 | -1.69E-46 |
| MS.gene053998 | MS.gene54918 | 0.806524 | 7.89E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene54918 | 0.83254 | 8.92E-56 | -1.69E-46 |
| MS.gene059584 | MS.gene54918 | 0.823117 | 1.65E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene54918 | MS.gene58221 | PPI |
| MS.gene54918 | MS.gene58198 | PPI |
| MS.gene54918 | MS.gene036701 | PPI |
| MS.gene54918 | MS.gene58017 | PPI |
| MS.gene54918 | MS.gene58016 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54918.t1 | MTR_0188s0020 | 98.361 | 427 | 7 | 0 | 1 | 427 | 45 | 471 | 0.0 | 878 |
| MS.gene54918.t1 | MTR_4g037105 | 87.354 | 427 | 54 | 0 | 1 | 427 | 39 | 465 | 0.0 | 793 |
| MS.gene54918.t1 | MTR_1g112630 | 85.047 | 428 | 63 | 1 | 1 | 427 | 40 | 467 | 0.0 | 769 |
| MS.gene54918.t1 | MTR_4g115670 | 62.019 | 416 | 155 | 2 | 1 | 415 | 39 | 452 | 0.0 | 543 |
| MS.gene54918.t1 | MTR_3g051240 | 44.810 | 395 | 190 | 10 | 17 | 410 | 43 | 410 | 2.24e-102 | 311 |
| MS.gene54918.t1 | MTR_5g092360 | 41.809 | 409 | 210 | 9 | 17 | 424 | 49 | 430 | 1.65e-100 | 306 |
| MS.gene54918.t1 | MTR_1g060360 | 41.772 | 395 | 203 | 8 | 17 | 410 | 46 | 414 | 6.39e-96 | 295 |
| MS.gene54918.t1 | MTR_7g104360 | 42.118 | 406 | 205 | 11 | 15 | 417 | 45 | 423 | 9.33e-96 | 294 |
| MS.gene54918.t1 | MTR_7g104330 | 41.266 | 395 | 205 | 8 | 17 | 410 | 54 | 422 | 4.52e-94 | 290 |
| MS.gene54918.t1 | MTR_3g083810 | 37.313 | 402 | 177 | 9 | 71 | 413 | 143 | 528 | 1.11e-75 | 246 |
| MS.gene54918.t1 | MTR_3g083820 | 36.816 | 402 | 179 | 8 | 71 | 413 | 143 | 528 | 9.12e-75 | 243 |
| MS.gene54918.t1 | MTR_7g056403 | 34.862 | 436 | 202 | 10 | 44 | 413 | 108 | 527 | 4.10e-74 | 241 |
| MS.gene54918.t1 | MTR_6g013050 | 32.704 | 477 | 227 | 13 | 28 | 426 | 90 | 550 | 4.67e-72 | 237 |
| MS.gene54918.t1 | MTR_6g013050 | 32.471 | 425 | 203 | 10 | 28 | 384 | 90 | 498 | 1.75e-64 | 216 |
| MS.gene54918.t1 | MTR_4g037670 | 27.604 | 384 | 213 | 16 | 17 | 353 | 216 | 581 | 2.40e-26 | 112 |
| MS.gene54918.t1 | MTR_1g052505 | 25.888 | 394 | 214 | 16 | 15 | 353 | 192 | 562 | 9.70e-26 | 110 |
| MS.gene54918.t1 | MTR_4g082930 | 25.225 | 444 | 263 | 14 | 16 | 402 | 143 | 574 | 3.61e-23 | 102 |
| MS.gene54918.t1 | MTR_3g074930 | 26.923 | 364 | 219 | 15 | 75 | 405 | 249 | 598 | 4.67e-23 | 102 |
| MS.gene54918.t1 | MTR_3g074930 | 26.923 | 364 | 219 | 15 | 75 | 405 | 256 | 605 | 4.77e-23 | 102 |
| MS.gene54918.t1 | MTR_4g103520 | 27.224 | 371 | 209 | 17 | 75 | 405 | 176 | 525 | 3.43e-22 | 99.4 |
| MS.gene54918.t1 | MTR_4g103520 | 27.224 | 371 | 209 | 17 | 75 | 405 | 253 | 602 | 4.51e-22 | 99.4 |
| MS.gene54918.t1 | MTR_5g045600 | 26.400 | 375 | 207 | 15 | 75 | 405 | 245 | 594 | 1.39e-21 | 97.8 |
| MS.gene54918.t1 | MTR_8g063080 | 25.683 | 366 | 221 | 14 | 75 | 405 | 238 | 587 | 4.21e-21 | 96.3 |
| MS.gene54918.t1 | MTR_4g082940 | 23.963 | 434 | 265 | 17 | 17 | 402 | 144 | 560 | 4.41e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54918.t1 | AT2G16430 | 79.097 | 421 | 88 | 0 | 1 | 421 | 43 | 463 | 0.0 | 710 |
| MS.gene54918.t1 | AT2G27190 | 72.771 | 415 | 113 | 0 | 1 | 415 | 44 | 458 | 0.0 | 657 |
| MS.gene54918.t1 | AT2G16430 | 81.009 | 337 | 64 | 0 | 85 | 421 | 7 | 343 | 0.0 | 586 |
| MS.gene54918.t1 | AT1G56360 | 64.789 | 426 | 143 | 3 | 1 | 420 | 34 | 458 | 0.0 | 585 |
| MS.gene54918.t1 | AT4G36350 | 63.593 | 423 | 148 | 3 | 3 | 420 | 37 | 458 | 0.0 | 576 |
| MS.gene54918.t1 | AT5G34850 | 60.817 | 416 | 160 | 2 | 1 | 415 | 38 | 451 | 0.0 | 540 |
| MS.gene54918.t1 | AT2G18130 | 58.057 | 422 | 153 | 4 | 3 | 421 | 40 | 440 | 4.18e-180 | 509 |
| MS.gene54918.t1 | AT3G46120 | 49.289 | 422 | 127 | 9 | 1 | 415 | 40 | 381 | 4.23e-132 | 385 |
| MS.gene54918.t1 | AT1G52940 | 60.494 | 243 | 91 | 4 | 3 | 242 | 1 | 241 | 7.42e-104 | 308 |
| MS.gene54918.t1 | AT3G20500 | 43.325 | 397 | 197 | 9 | 15 | 410 | 45 | 414 | 6.68e-99 | 302 |
| MS.gene54918.t1 | AT3G52820 | 41.919 | 396 | 201 | 8 | 17 | 410 | 47 | 415 | 5.27e-97 | 297 |
| MS.gene54918.t1 | AT3G52780 | 41.709 | 398 | 203 | 10 | 17 | 410 | 44 | 416 | 1.61e-90 | 281 |
| MS.gene54918.t1 | AT3G52810 | 41.667 | 396 | 202 | 8 | 17 | 410 | 51 | 419 | 2.53e-90 | 280 |
| MS.gene54918.t1 | AT3G07130 | 35.476 | 420 | 198 | 11 | 51 | 413 | 115 | 518 | 5.41e-73 | 238 |
| MS.gene54918.t1 | AT3G07130 | 32.892 | 453 | 198 | 12 | 51 | 413 | 115 | 551 | 5.81e-66 | 221 |
| MS.gene54918.t1 | AT2G32770 | 35.101 | 396 | 177 | 9 | 69 | 399 | 143 | 523 | 7.23e-66 | 220 |
| MS.gene54918.t1 | AT4G13700 | 36.559 | 372 | 177 | 11 | 34 | 362 | 80 | 435 | 6.40e-64 | 213 |
| MS.gene54918.t1 | AT3G52780 | 39.414 | 307 | 168 | 9 | 17 | 319 | 44 | 336 | 4.31e-58 | 194 |
| MS.gene54918.t1 | AT2G32770 | 33.508 | 382 | 174 | 9 | 69 | 385 | 62 | 428 | 6.42e-58 | 196 |
| MS.gene54918.t1 | AT2G32770 | 31.818 | 396 | 161 | 10 | 69 | 399 | 143 | 494 | 3.47e-52 | 183 |
| MS.gene54918.t1 | AT4G13700 | 35.583 | 326 | 162 | 10 | 34 | 316 | 80 | 400 | 7.08e-52 | 179 |
| MS.gene54918.t1 | AT5G50400 | 26.124 | 356 | 222 | 15 | 75 | 400 | 165 | 509 | 9.44e-22 | 98.2 |
| MS.gene54918.t1 | AT5G50400 | 26.124 | 356 | 222 | 15 | 75 | 400 | 237 | 581 | 9.69e-22 | 98.2 |
| MS.gene54918.t1 | AT1G13750 | 27.945 | 365 | 204 | 15 | 75 | 400 | 239 | 583 | 1.20e-21 | 97.8 |
| MS.gene54918.t1 | AT2G03450 | 25.828 | 453 | 249 | 18 | 15 | 402 | 141 | 571 | 6.57e-21 | 95.9 |
| MS.gene54918.t1 | AT1G13900 | 25.926 | 378 | 211 | 13 | 75 | 402 | 213 | 571 | 5.53e-20 | 92.8 |
| MS.gene54918.t1 | AT4G24890 | 25.275 | 364 | 225 | 15 | 75 | 405 | 241 | 590 | 3.93e-19 | 90.1 |
Find 90 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGGAAGCTTACAATTTC+TGG | 0.082605 | 4.4:-66430509 | None:intergenic |
| ATCTCCAATGTTTATGTATA+CGG | 0.202094 | 4.4:-66431693 | None:intergenic |
| TCCAACCTCATAATAATATT+TGG | 0.245668 | 4.4:-66429656 | None:intergenic |
| TTGCTTATCAACCTTGGATA+TGG | 0.250325 | 4.4:+66430456 | MS.gene54918:CDS |
| CACCTAACATTGTCATGATT+TGG | 0.267170 | 4.4:-66430401 | None:intergenic |
| GGTCGGATGCAGTGCGTTAC+TGG | 0.268473 | 4.4:+66429428 | MS.gene54918:CDS |
| GTACTTTGTGATGCTTTATA+AGG | 0.272518 | 4.4:-66430689 | None:intergenic |
| ATTGCATATAATATCGTAAA+TGG | 0.285493 | 4.4:+66431638 | MS.gene54918:CDS |
| TTATTCATCATGCCACTATA+AGG | 0.295631 | 4.4:+66429527 | MS.gene54918:CDS |
| CACAAAGTACTTCACCCTTT+TGG | 0.304317 | 4.4:+66430702 | MS.gene54918:CDS |
| AGAACACAACAAGGCAGTTT+TGG | 0.305509 | 4.4:+66429683 | MS.gene54918:CDS |
| GTGATGCTTTATAAGGAGTA+TGG | 0.325433 | 4.4:-66430682 | None:intergenic |
| CTGGAGCGAAATCAAGTTCA+TGG | 0.325613 | 4.4:-66430490 | None:intergenic |
| AAAGTTGATGTTGTGTTTGC+TGG | 0.344435 | 4.4:+66431453 | MS.gene54918:CDS |
| ACAATGTTAGGTGGGATACT+TGG | 0.352712 | 4.4:+66430411 | MS.gene54918:CDS |
| AAGAGCTACCGAGAGTTAAC+AGG | 0.373690 | 4.4:+66431313 | MS.gene54918:CDS |
| TCAATGGGAACCATGAGGTT+TGG | 0.378926 | 4.4:-66432260 | None:intergenic |
| TACCTTCAAATTCCTTATAG+TGG | 0.384082 | 4.4:-66429539 | None:intergenic |
| GTATGGTATCGGTGCGAAAA+AGG | 0.385639 | 4.4:-66430665 | None:intergenic |
| AGATACTTCAATTACTCATC+TGG | 0.391362 | 4.4:+66429502 | MS.gene54918:CDS |
| CCATACACATTTGGTCTCAT+AGG | 0.391563 | 4.4:+66429739 | MS.gene54918:CDS |
| TTTACAACTCCTCCTGCAAT+TGG | 0.394407 | 4.4:+66429706 | MS.gene54918:CDS |
| GCATTTAGAGAAGCCAGCTT+TGG | 0.397912 | 4.4:+66432109 | MS.gene54918:CDS |
| CTGTTAAGAGTGATTCCCTT+TGG | 0.403017 | 4.4:+66432203 | MS.gene54918:CDS |
| ATCCAAATCATGACAATGTT+AGG | 0.403565 | 4.4:+66430399 | MS.gene54918:CDS |
| CCAAATGTGTATGGCACATC+AGG | 0.405903 | 4.4:-66429730 | None:intergenic |
| CAATGTTAGGTGGGATACTT+GGG | 0.412473 | 4.4:+66430412 | MS.gene54918:CDS |
| CACATTGAGTATTCTTCAAT+GGG | 0.419089 | 4.4:-66432275 | None:intergenic |
| CCTGATGTGCCATACACATT+TGG | 0.422920 | 4.4:+66429730 | MS.gene54918:CDS |
| GGCACATCAGGACCAATTGC+AGG | 0.425315 | 4.4:-66429718 | None:intergenic |
| TGGTTATAATGCTCCTCAAC+AGG | 0.425812 | 4.4:+66428493 | MS.gene54918:CDS |
| TGAGGTTTGGAATCATCAAC+CGG | 0.433017 | 4.4:-66432247 | None:intergenic |
| TTGGCCTCATATTCAGCATA+TGG | 0.449605 | 4.4:+66430761 | MS.gene54918:CDS |
| ACCAAATATTATTATGAGGT+TGG | 0.454862 | 4.4:+66429655 | MS.gene54918:CDS |
| TTCAGCACACATCATTGTCT+TGG | 0.481429 | 4.4:+66430742 | MS.gene54918:CDS |
| AATACCATATGCTGAATATG+AGG | 0.494395 | 4.4:-66430765 | None:intergenic |
| TCTCTAAATGCTGAGTACTC+TGG | 0.496127 | 4.4:-66432097 | None:intergenic |
| AGCACAAGAAGCTAGCTAAA+GGG | 0.498611 | 4.4:+66429464 | MS.gene54918:CDS |
| CAATACCAAATATTATTATG+AGG | 0.502409 | 4.4:+66429651 | MS.gene54918:CDS |
| CCTATGAGACCAAATGTGTA+TGG | 0.507863 | 4.4:-66429739 | None:intergenic |
| CAACCTTGGATATGGACTGT+TGG | 0.510685 | 4.4:+66430464 | MS.gene54918:CDS |
| TCTCCAATGTTTATGTATAC+GGG | 0.514819 | 4.4:-66431692 | None:intergenic |
| GGACACATGCTTACTATAGC+TGG | 0.517434 | 4.4:+66432158 | MS.gene54918:CDS |
| TATCAATTGAATTCAACAAA+AGG | 0.519489 | 4.4:+66430332 | MS.gene54918:CDS |
| AAGCACAAGAAGCTAGCTAA+AGG | 0.523147 | 4.4:+66429463 | MS.gene54918:CDS |
| TGAGAGTAATGTTTGAGTCA+TGG | 0.529431 | 4.4:+66431418 | MS.gene54918:CDS |
| GGAGTGTTGCTTATCAACCT+TGG | 0.535303 | 4.4:+66430450 | MS.gene54918:CDS |
| TCTTCAAGCCACGCATATTG+TGG | 0.536931 | 4.4:-66431291 | None:intergenic |
| TGCCACTATAAGGAATTTGA+AGG | 0.549389 | 4.4:+66429537 | MS.gene54918:CDS |
| ATCTTTCGTAGGCATGTACA+TGG | 0.549448 | 4.4:-66431476 | None:intergenic |
| TACATAAACATTGGAGATGG+AGG | 0.553188 | 4.4:+66431698 | MS.gene54918:CDS |
| ACAGCTATCATTACATGGAA+GGG | 0.559696 | 4.4:+66431388 | MS.gene54918:CDS |
| AACAGCTATCATTACATGGA+AGG | 0.564929 | 4.4:+66431387 | MS.gene54918:CDS |
| TGGGTGACAGAGGATGAACC+AGG | 0.567319 | 4.4:+66429406 | MS.gene54918:CDS |
| AATGCTGAGTACTCTGGCTG+TGG | 0.569296 | 4.4:-66432091 | None:intergenic |
| CAAATCATGACAATGTTAGG+TGG | 0.571283 | 4.4:+66430402 | MS.gene54918:CDS |
| CTTTATAAGGAGTATGGTAT+CGG | 0.573117 | 4.4:-66430676 | None:intergenic |
| CAGCTATCATTACATGGAAG+GGG | 0.582038 | 4.4:+66431389 | MS.gene54918:CDS |
| TTGTTCTCATGCATTCACCT+TGG | 0.582761 | 4.4:+66431355 | MS.gene54918:CDS |
| GTTGATGATTCCAAACCTCA+TGG | 0.582800 | 4.4:+66432250 | MS.gene54918:CDS |
| TAGCAACAGCTATCATTACA+TGG | 0.590375 | 4.4:+66431383 | MS.gene54918:CDS |
| TAACGCACTGCATCCGACCC+TGG | 0.593203 | 4.4:-66429424 | None:intergenic |
| GTATACATAAACATTGGAGA+TGG | 0.598366 | 4.4:+66431695 | MS.gene54918:CDS |
| AAATCATGACAATGTTAGGT+GGG | 0.598863 | 4.4:+66430403 | MS.gene54918:CDS |
| GAAAGCAGTGATCGTATCGT+GGG | 0.600675 | 4.4:+66429387 | MS.gene54918:CDS |
| GACAGAGGATGAACCAGGGT+CGG | 0.603361 | 4.4:+66429411 | MS.gene54918:CDS |
| GATCGTATCGTGGGTGACAG+AGG | 0.610705 | 4.4:+66429396 | MS.gene54918:CDS |
| ATAACACAAGGTGATCATGT+GGG | 0.617402 | 4.4:+66429364 | MS.gene54918:CDS |
| TTTCCAACAGTCCATATCCA+AGG | 0.618073 | 4.4:-66430467 | None:intergenic |
| TATAACACAAGGTGATCATG+TGG | 0.618384 | 4.4:+66429363 | MS.gene54918:CDS |
| GGAAAGCAGTGATCGTATCG+TGG | 0.618795 | 4.4:+66429386 | MS.gene54918:CDS |
| TAACACAAGGTGATCATGTG+GGG | 0.622210 | 4.4:+66429365 | MS.gene54918:CDS |
| GCTCCCGTATACATAAACAT+TGG | 0.629958 | 4.4:+66431689 | MS.gene54918:CDS |
| AGTACTTACAGATCTTTCGT+AGG | 0.631526 | 4.4:-66431487 | None:intergenic |
| GGAGATGGAGGGAATATCGA+AGG | 0.632052 | 4.4:+66431710 | MS.gene54918:CDS |
| ACATAAACATTGGAGATGGA+GGG | 0.632691 | 4.4:+66431699 | MS.gene54918:CDS |
| AGCTGGCATAGAAATCAAGA+TGG | 0.638512 | 4.4:+66432175 | MS.gene54918:CDS |
| AATATACACCACAATATGCG+TGG | 0.647948 | 4.4:+66431283 | MS.gene54918:CDS |
| ATGTTAGGTGGGATACTTGG+GGG | 0.660542 | 4.4:+66430414 | MS.gene54918:CDS |
| TGTTGAGGAGCATTATAACC+AGG | 0.661090 | 4.4:-66428491 | None:intergenic |
| AATGTTAGGTGGGATACTTG+GGG | 0.667822 | 4.4:+66430413 | MS.gene54918:CDS |
| GAGGTTTGGAATCATCAACC+GGG | 0.673172 | 4.4:-66432246 | None:intergenic |
| ATTCTTCAATGGGAACCATG+AGG | 0.678851 | 4.4:-66432265 | None:intergenic |
| TGCATGAGAACAATCAACCA+AGG | 0.682000 | 4.4:-66431345 | None:intergenic |
| ACATCAGGACCAATTGCAGG+AGG | 0.687083 | 4.4:-66429715 | None:intergenic |
| ATGAAGGTTCATATAACACA+AGG | 0.696049 | 4.4:+66429352 | MS.gene54918:intron |
| TAGCTGTTGCTATTATACCA+AGG | 0.710700 | 4.4:-66431372 | None:intergenic |
| GGGTGACAGAGGATGAACCA+GGG | 0.727268 | 4.4:+66429407 | MS.gene54918:CDS |
| TTGGACTTAAGAACACAACA+AGG | 0.748770 | 4.4:+66429674 | MS.gene54918:CDS |
| TGAGGAGCATTATAACCAGG+AGG | 0.752719 | 4.4:-66428488 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATTGTAATAAAAATATT+GGG | + | chr4.4:66428816-66428835 | MS.gene54918:intron | 10.0% |
| !!! | AGTTTTAATGTTTTAATATA+TGG | + | chr4.4:66429320-66429339 | MS.gene54918:intron | 10.0% |
| !!! | TTATTTAATTTTTAACTTCA+GGG | - | chr4.4:66431086-66431105 | None:intergenic | 10.0% |
| !!! | TTTATTTAATTTTTAACTTC+AGG | - | chr4.4:66431087-66431106 | None:intergenic | 10.0% |
| !! | GAGAATTGTAATAAAAATAT+TGG | + | chr4.4:66428815-66428834 | MS.gene54918:intron | 15.0% |
| !!! | CAAATTAAATCGATTTATAT+TGG | - | chr4.4:66430529-66430548 | None:intergenic | 15.0% |
| !!! | CAATATAAATCGATTTAATT+TGG | + | chr4.4:66430527-66430546 | MS.gene54918:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAA+TGG | - | chr4.4:66429895-66429914 | None:intergenic | 15.0% |
| !!! | TTTCAAAATATTTTGTGAAA+AGG | - | chr4.4:66431535-66431554 | None:intergenic | 15.0% |
| !!! | TTTCTGTAATATTTTATTGA+AGG | + | chr4.4:66431932-66431951 | MS.gene54918:intron | 15.0% |
| !! | AAAATCTATTGAAAAACCAA+AGG | - | chr4.4:66432222-66432241 | None:intergenic | 20.0% |
| !! | AAACATTAAAACTTAAAGCA+AGG | - | chr4.4:66429313-66429332 | None:intergenic | 20.0% |
| !! | AAATCTATTGAAAAACCAAA+GGG | - | chr4.4:66432221-66432240 | None:intergenic | 20.0% |
| !! | AAATGTTTAGACTTTAGTTA+TGG | - | chr4.4:66430056-66430075 | None:intergenic | 20.0% |
| !! | AAATTATTACAAGGATTTAC+AGG | - | chr4.4:66431058-66431077 | None:intergenic | 20.0% |
| !! | AATATTACAGAAAGAGAAAT+CGG | - | chr4.4:66431925-66431944 | None:intergenic | 20.0% |
| !! | AATGATAGAGACAATTAAAA+AGG | + | chr4.4:66432018-66432037 | MS.gene54918:intron | 20.0% |
| !! | ACTCTCTTCAAAATTAAAAA+AGG | - | chr4.4:66429000-66429019 | None:intergenic | 20.0% |
| !! | ATTGCATATAATATCGTAAA+TGG | + | chr4.4:66431638-66431657 | MS.gene54918:CDS | 20.0% |
| !! | CAATACCAAATATTATTATG+AGG | + | chr4.4:66429651-66429670 | MS.gene54918:CDS | 20.0% |
| !! | TATCAATTGAATTCAACAAA+AGG | + | chr4.4:66430332-66430351 | MS.gene54918:CDS | 20.0% |
| !! | TTATTGTGTAAACTTGTAAA+GGG | + | chr4.4:66431186-66431205 | MS.gene54918:intron | 20.0% |
| !! | TTCAGTGTAATTATAAATGT+CGG | + | chr4.4:66429920-66429939 | MS.gene54918:intron | 20.0% |
| !!! | AGTCATTAAGTTTTCATTTA+TGG | - | chr4.4:66431755-66431774 | None:intergenic | 20.0% |
| !!! | ATATAATCTTCATTTTTCTC+AGG | + | chr4.4:66431258-66431277 | MS.gene54918:intron | 20.0% |
| !!! | ATCTAATAGTGGATTTTTAT+CGG | + | chr4.4:66430995-66431014 | MS.gene54918:intron | 20.0% |
| !!! | ATTTTAAACCATGATATTAC+AGG | + | chr4.4:66429176-66429195 | MS.gene54918:intron | 20.0% |
| !!! | GGATATATGTTTTTAAATCA+CGG | + | chr4.4:66428559-66428578 | MS.gene54918:intron | 20.0% |
| !!! | TAAAATTATGAGTTGAAAGA+TGG | - | chr4.4:66430152-66430171 | None:intergenic | 20.0% |
| !!! | TAGTTTGATTTGTATTATGA+AGG | + | chr4.4:66429049-66429068 | MS.gene54918:intron | 20.0% |
| !!! | TTTGGTTTTTCAATAGATTT+TGG | + | chr4.4:66432221-66432240 | MS.gene54918:CDS | 20.0% |
| ! | AAAAATTGCAGTTAAAATGC+AGG | + | chr4.4:66428616-66428635 | MS.gene54918:intron | 25.0% |
| ! | AAATAGAAAAATACCTGTTG+AGG | - | chr4.4:66428509-66428528 | None:intergenic | 25.0% |
| ! | AAATATCAAAACTTTGCATC+TGG | - | chr4.4:66429611-66429630 | None:intergenic | 25.0% |
| ! | AACTTATGATGATACATGTT+TGG | + | chr4.4:66429098-66429117 | MS.gene54918:intron | 25.0% |
| ! | ACCAAATATTATTATGAGGT+TGG | + | chr4.4:66429655-66429674 | MS.gene54918:CDS | 25.0% |
| ! | AGGTAAAGTATAATCTTTCA+TGG | + | chr4.4:66429759-66429778 | MS.gene54918:intron | 25.0% |
| ! | ATCTCCAATGTTTATGTATA+CGG | - | chr4.4:66431696-66431715 | None:intergenic | 25.0% |
| ! | ATTCTTGATGCTATAAAGAA+TGG | + | chr4.4:66428859-66428878 | MS.gene54918:intron | 25.0% |
| ! | CAATCATAGCTTATATAAAG+TGG | - | chr4.4:66429239-66429258 | None:intergenic | 25.0% |
| ! | CATGATATTACAGGTAAATT+AGG | + | chr4.4:66429185-66429204 | MS.gene54918:intron | 25.0% |
| ! | CTAATTTACCTGTAATATCA+TGG | - | chr4.4:66429187-66429206 | None:intergenic | 25.0% |
| ! | CTTATTGTGTAAACTTGTAA+AGG | + | chr4.4:66431185-66431204 | MS.gene54918:intron | 25.0% |
| ! | GAATGAACTAATGATTAACA+TGG | + | chr4.4:66430603-66430622 | MS.gene54918:intron | 25.0% |
| ! | GTTCATTCATTACCAAAATT+TGG | - | chr4.4:66430591-66430610 | None:intergenic | 25.0% |
| ! | TAAAAAAACCTTTACACTGA+TGG | + | chr4.4:66430110-66430129 | MS.gene54918:intron | 25.0% |
| ! | TAAAAATTTAACATGCCTTC+AGG | + | chr4.4:66431108-66431127 | MS.gene54918:intron | 25.0% |
| ! | TAGCTTATATAAAGTGGAAA+TGG | - | chr4.4:66429233-66429252 | None:intergenic | 25.0% |
| ! | TCAAACTACAAAATACAGAA+TGG | - | chr4.4:66429037-66429056 | None:intergenic | 25.0% |
| ! | TCCAACCTCATAATAATATT+TGG | - | chr4.4:66429659-66429678 | None:intergenic | 25.0% |
| ! | TCTCAAATTATTAATGGTGT+TGG | - | chr4.4:66429889-66429908 | None:intergenic | 25.0% |
| ! | TGAAGAGAGTAATAATTACA+AGG | + | chr4.4:66429010-66429029 | MS.gene54918:intron | 25.0% |
| ! | TGCAAATAAAATTGATCCAT+TGG | - | chr4.4:66430860-66430879 | None:intergenic | 25.0% |
| !! | ACATAAATATTTCCTTTTGC+AGG | + | chr4.4:66429959-66429978 | MS.gene54918:intron | 25.0% |
| !! | CAATTTTTGACATAAAGAAC+AGG | + | chr4.4:66432137-66432156 | MS.gene54918:CDS | 25.0% |
| !! | CTTTTGATAGAATACCAAAA+GGG | - | chr4.4:66430719-66430738 | None:intergenic | 25.0% |
| !! | TCTTTTGATAGAATACCAAA+AGG | - | chr4.4:66430720-66430739 | None:intergenic | 25.0% |
| !! | TGTTTTACAATAACAGTTTG+TGG | - | chr4.4:66430898-66430917 | None:intergenic | 25.0% |
| !! | TTGATATTTGTGCTTCTTTT+TGG | + | chr4.4:66429622-66429641 | MS.gene54918:intron | 25.0% |
| !!! | CGTTGCAATTTTTTATACTA+CGG | + | chr4.4:66428793-66428812 | MS.gene54918:intron | 25.0% |
| !!! | TTTTTTGAGTTGTCGTTTTA+AGG | + | chr4.4:66431797-66431816 | MS.gene54918:intron | 25.0% |
| AAATCATGACAATGTTAGGT+GGG | + | chr4.4:66430403-66430422 | MS.gene54918:CDS | 30.0% | |
| AATACCATATGCTGAATATG+AGG | - | chr4.4:66430768-66430787 | None:intergenic | 30.0% | |
| AATGGAGGTAAATATACAAC+AGG | + | chr4.4:66428877-66428896 | MS.gene54918:intron | 30.0% | |
| ACCACAATGATATCTCATAA+AGG | - | chr4.4:66429793-66429812 | None:intergenic | 30.0% | |
| ACCATGAATCAACTCAAAAT+TGG | - | chr4.4:66428534-66428553 | None:intergenic | 30.0% | |
| ACTATTCAGTCTTTACAACA+TGG | + | chr4.4:66430186-66430205 | MS.gene54918:intron | 30.0% | |
| AGAAACAACATACATGACAA+GGG | - | chr4.4:66429583-66429602 | None:intergenic | 30.0% | |
| AGAAATATATGTCCTGCAAA+AGG | - | chr4.4:66429974-66429993 | None:intergenic | 30.0% | |
| AGAATGAAAAGTTTCTCGAA+TGG | - | chr4.4:66430559-66430578 | None:intergenic | 30.0% | |
| AGATACTTCAATTACTCATC+TGG | + | chr4.4:66429502-66429521 | MS.gene54918:CDS | 30.0% | |
| AGGGACGTAAAATTATTACA+AGG | - | chr4.4:66431067-66431086 | None:intergenic | 30.0% | |
| ATCCAAATCATGACAATGTT+AGG | + | chr4.4:66430399-66430418 | MS.gene54918:CDS | 30.0% | |
| ATGAACATGATTTGAATTGC+AGG | + | chr4.4:66432059-66432078 | MS.gene54918:intron | 30.0% | |
| ATGAAGGTTCATATAACACA+AGG | + | chr4.4:66429352-66429371 | MS.gene54918:intron | 30.0% | |
| ATTAAAAAAGGTTTGCGACT+AGG | - | chr4.4:66428988-66429007 | None:intergenic | 30.0% | |
| GATTCAATATACAAGAGAGT+TGG | + | chr4.4:66428920-66428939 | MS.gene54918:intron | 30.0% | |
| GTAATTATAAATGTCGGTGT+CGG | + | chr4.4:66429926-66429945 | MS.gene54918:intron | 30.0% | |
| GTACTTTGTGATGCTTTATA+AGG | - | chr4.4:66430692-66430711 | None:intergenic | 30.0% | |
| GTATACATAAACATTGGAGA+TGG | + | chr4.4:66431695-66431714 | MS.gene54918:CDS | 30.0% | |
| GTGTTATATGAACCTTCATT+AGG | - | chr4.4:66429351-66429370 | None:intergenic | 30.0% | |
| TACCTTCAAATTCCTTATAG+TGG | - | chr4.4:66429542-66429561 | None:intergenic | 30.0% | |
| TAGAAATTAGTACTGTGACA+TGG | - | chr4.4:66430958-66430977 | None:intergenic | 30.0% | |
| TATATGGTTGATCCTAATGA+AGG | + | chr4.4:66429336-66429355 | MS.gene54918:intron | 30.0% | |
| TATTGGAAGCTTACAATTTC+TGG | - | chr4.4:66430512-66430531 | None:intergenic | 30.0% | |
| TCATTACCAAAATTTGGACT+TGG | - | chr4.4:66430585-66430604 | None:intergenic | 30.0% | |
| TCTCCAATGTTTATGTATAC+GGG | - | chr4.4:66431695-66431714 | None:intergenic | 30.0% | |
| TGATAAGACATTGAAGAAGA+GGG | + | chr4.4:66429257-66429276 | MS.gene54918:intron | 30.0% | |
| TTAAAATGCGGTCAAAATCA+TGG | + | chr4.4:66428945-66428964 | MS.gene54918:intron | 30.0% | |
| TTAACAGGAAAAAAACTCCT+TGG | + | chr4.4:66431328-66431347 | MS.gene54918:CDS | 30.0% | |
| TTATTCATCATGCCACTATA+AGG | + | chr4.4:66429527-66429546 | MS.gene54918:CDS | 30.0% | |
| TTGATAAGACATTGAAGAAG+AGG | + | chr4.4:66429256-66429275 | MS.gene54918:intron | 30.0% | |
| TTTCATTTATGGAGCTTACT+CGG | - | chr4.4:66431744-66431763 | None:intergenic | 30.0% | |
| ! | ACTGATTCTATGATTTCCAA+TGG | + | chr4.4:66430841-66430860 | MS.gene54918:intron | 30.0% |
| ! | CTTTATAAGGAGTATGGTAT+CGG | - | chr4.4:66430679-66430698 | None:intergenic | 30.0% |
| ! | TAATTATAAATGTCGGTGTC+GGG | + | chr4.4:66429927-66429946 | MS.gene54918:intron | 30.0% |
| ! | TCTTTTCCAAGTCCAAATTT+TGG | + | chr4.4:66430576-66430595 | MS.gene54918:intron | 30.0% |
| !!! | ACTTGATAGCGATGTTTTTA+GGG | + | chr4.4:66428463-66428482 | MS.gene54918:CDS | 30.0% |
| !!! | GTTTTTTTCCTGTTAACTCT+CGG | - | chr4.4:66431324-66431343 | None:intergenic | 30.0% |
| !!! | TCCAATTTTGAGTTGATTCA+TGG | + | chr4.4:66428530-66428549 | MS.gene54918:intron | 30.0% |
| !!! | TTTCAATAGATTTTGGAACC+CGG | + | chr4.4:66432228-66432247 | MS.gene54918:CDS | 30.0% |
| AAAAATTGCATGTCCAAAGC+TGG | - | chr4.4:66432125-66432144 | None:intergenic | 35.0% | |
| AACAGCTATCATTACATGGA+AGG | + | chr4.4:66431387-66431406 | MS.gene54918:CDS | 35.0% | |
| AAGCGATATATGTTTGTGTC+AGG | + | chr4.4:66431601-66431620 | MS.gene54918:intron | 35.0% | |
| AATATACACCACAATATGCG+TGG | + | chr4.4:66431283-66431302 | MS.gene54918:CDS | 35.0% | |
| AATTTGACCTTGTAACCTGA+AGG | - | chr4.4:66431126-66431145 | None:intergenic | 35.0% | |
| ACAGCTATCATTACATGGAA+GGG | + | chr4.4:66431388-66431407 | MS.gene54918:CDS | 35.0% | |
| ACATAAACATTGGAGATGGA+GGG | + | chr4.4:66431699-66431718 | MS.gene54918:CDS | 35.0% | |
| ACCATACATACATGCATATG+TGG | + | chr4.4:66430806-66430825 | MS.gene54918:intron | 35.0% | |
| AGAGAGTTGGAGTTAAAATG+CGG | + | chr4.4:66428933-66428952 | MS.gene54918:intron | 35.0% | |
| AGTACTTACAGATCTTTCGT+AGG | - | chr4.4:66431490-66431509 | None:intergenic | 35.0% | |
| ATAACACAAGGTGATCATGT+GGG | + | chr4.4:66429364-66429383 | MS.gene54918:CDS | 35.0% | |
| ATTACAGAAAGAGAAATCGG+TGG | - | chr4.4:66431922-66431941 | None:intergenic | 35.0% | |
| CAAATCATGACAATGTTAGG+TGG | + | chr4.4:66430402-66430421 | MS.gene54918:CDS | 35.0% | |
| CACCTAACATTGTCATGATT+TGG | - | chr4.4:66430404-66430423 | None:intergenic | 35.0% | |
| CACTATTAGATGTTAGTGCA+AGG | - | chr4.4:66430986-66431005 | None:intergenic | 35.0% | |
| CATATACACCATCAGTGTAA+AGG | - | chr4.4:66430121-66430140 | None:intergenic | 35.0% | |
| CTAAAAACATCGCTATCAAG+TGG | - | chr4.4:66428464-66428483 | None:intergenic | 35.0% | |
| CTTGATGCTATAAAGAATGG+AGG | + | chr4.4:66428862-66428881 | MS.gene54918:intron | 35.0% | |
| CTTGCACTAACATCTAATAG+TGG | + | chr4.4:66430984-66431003 | MS.gene54918:intron | 35.0% | |
| GAGAAACAACATACATGACA+AGG | - | chr4.4:66429584-66429603 | None:intergenic | 35.0% | |
| GCCTTTATGAGATATCATTG+TGG | + | chr4.4:66429789-66429808 | MS.gene54918:intron | 35.0% | |
| GTGATGCTTTATAAGGAGTA+TGG | - | chr4.4:66430685-66430704 | None:intergenic | 35.0% | |
| TACATAAACATTGGAGATGG+AGG | + | chr4.4:66431698-66431717 | MS.gene54918:CDS | 35.0% | |
| TAGCAACAGCTATCATTACA+TGG | + | chr4.4:66431383-66431402 | MS.gene54918:CDS | 35.0% | |
| TATAACACAAGGTGATCATG+TGG | + | chr4.4:66429363-66429382 | MS.gene54918:CDS | 35.0% | |
| TCACATGAATCAGTACTCTT+TGG | - | chr4.4:66431580-66431599 | None:intergenic | 35.0% | |
| TCCACATATGCATGTATGTA+TGG | - | chr4.4:66430810-66430829 | None:intergenic | 35.0% | |
| TGAGAGTAATGTTTGAGTCA+TGG | + | chr4.4:66431418-66431437 | MS.gene54918:CDS | 35.0% | |
| TGATCAGTTTCAATGAAGCA+CGG | + | chr4.4:66429829-66429848 | MS.gene54918:intron | 35.0% | |
| TGCCACTATAAGGAATTTGA+AGG | + | chr4.4:66429537-66429556 | MS.gene54918:CDS | 35.0% | |
| TGGATTGACGATTATTTGCA+GGG | + | chr4.4:66430623-66430642 | MS.gene54918:intron | 35.0% | |
| TTGCTTATCAACCTTGGATA+TGG | + | chr4.4:66430456-66430475 | MS.gene54918:CDS | 35.0% | |
| TTGGACTTAAGAACACAACA+AGG | + | chr4.4:66429674-66429693 | MS.gene54918:CDS | 35.0% | |
| ! | ATGGATTGACGATTATTTGC+AGG | + | chr4.4:66430622-66430641 | MS.gene54918:intron | 35.0% |
| ! | TAGCTGTTGCTATTATACCA+AGG | - | chr4.4:66431375-66431394 | None:intergenic | 35.0% |
| !! | AAAGTTGATGTTGTGTTTGC+TGG | + | chr4.4:66431453-66431472 | MS.gene54918:CDS | 35.0% |
| !! | AGTGGAAATGGACTATGATA+AGG | - | chr4.4:66429221-66429240 | None:intergenic | 35.0% |
| !! | GTCAGACTTTTGATTCAAAC+AGG | + | chr4.4:66430297-66430316 | MS.gene54918:CDS | 35.0% |
| !! | TGAGTTGATTCATGGTAGAA+GGG | + | chr4.4:66428538-66428557 | MS.gene54918:intron | 35.0% |
| !! | TTGAGTTGATTCATGGTAGA+AGG | + | chr4.4:66428537-66428556 | MS.gene54918:intron | 35.0% |
| !!! | CACTTGATAGCGATGTTTTT+AGG | + | chr4.4:66428462-66428481 | MS.gene54918:CDS | 35.0% |
| !!! | GGACAAACAGTTTTGTTTGT+TGG | + | chr4.4:66430353-66430372 | MS.gene54918:CDS | 35.0% |
| AAGACATTGAAGAAGAGGGA+GGG | + | chr4.4:66429261-66429280 | MS.gene54918:intron | 40.0% | |
| AAGCACAAGAAGCTAGCTAA+AGG | + | chr4.4:66429463-66429482 | MS.gene54918:CDS | 40.0% | |
| AAGCATGCTACATCAGTTAG+TGG | - | chr4.4:66430263-66430282 | None:intergenic | 40.0% | |
| AATGTTAGGTGGGATACTTG+GGG | + | chr4.4:66430413-66430432 | MS.gene54918:CDS | 40.0% | |
| ACAATGTTAGGTGGGATACT+TGG | + | chr4.4:66430411-66430430 | MS.gene54918:CDS | 40.0% | |
| AGCACAAGAAGCTAGCTAAA+GGG | + | chr4.4:66429464-66429483 | MS.gene54918:CDS | 40.0% | |
| AGCTGGCATAGAAATCAAGA+TGG | + | chr4.4:66432175-66432194 | MS.gene54918:CDS | 40.0% | |
| AGTACTGTGACATGGAAACA+TGG | - | chr4.4:66430950-66430969 | None:intergenic | 40.0% | |
| ATCTTTCGTAGGCATGTACA+TGG | - | chr4.4:66431479-66431498 | None:intergenic | 40.0% | |
| CAATGTTAGGTGGGATACTT+GGG | + | chr4.4:66430412-66430431 | MS.gene54918:CDS | 40.0% | |
| CAGCTATCATTACATGGAAG+GGG | + | chr4.4:66431389-66431408 | MS.gene54918:CDS | 40.0% | |
| CATACATGACAAGGGAGTAA+TGG | - | chr4.4:66429575-66429594 | None:intergenic | 40.0% | |
| CATTCCTACATGCATTGTTG+TGG | + | chr4.4:66429132-66429151 | MS.gene54918:intron | 40.0% | |
| CCATACACATTTGGTCTCAT+AGG | + | chr4.4:66429739-66429758 | MS.gene54918:CDS | 40.0% | |
| CCTATGAGACCAAATGTGTA+TGG | - | chr4.4:66429742-66429761 | None:intergenic | 40.0% | |
| CTGTTAAGAGTGATTCCCTT+TGG | + | chr4.4:66432203-66432222 | MS.gene54918:CDS | 40.0% | |
| GATGATACATGTTTGGTCTC+TGG | + | chr4.4:66429105-66429124 | MS.gene54918:intron | 40.0% | |
| GATTCCACAACAATGCATGT+AGG | - | chr4.4:66429139-66429158 | None:intergenic | 40.0% | |
| GCTCCCGTATACATAAACAT+TGG | + | chr4.4:66431689-66431708 | MS.gene54918:CDS | 40.0% | |
| GTTTCAATGAAGCACGGATA+CGG | + | chr4.4:66429835-66429854 | MS.gene54918:intron | 40.0% | |
| TAACACAAGGTGATCATGTG+GGG | + | chr4.4:66429365-66429384 | MS.gene54918:CDS | 40.0% | |
| TAAGACATTGAAGAAGAGGG+AGG | + | chr4.4:66429260-66429279 | MS.gene54918:intron | 40.0% | |
| TCTCTAAATGCTGAGTACTC+TGG | - | chr4.4:66432100-66432119 | None:intergenic | 40.0% | |
| TGCATGAGAACAATCAACCA+AGG | - | chr4.4:66431348-66431367 | None:intergenic | 40.0% | |
| TGGTTATAATGCTCCTCAAC+AGG | + | chr4.4:66428493-66428512 | MS.gene54918:CDS | 40.0% | |
| TTCAGCACACATCATTGTCT+TGG | + | chr4.4:66430742-66430761 | MS.gene54918:CDS | 40.0% | |
| TTGCGATGAAAATACACTCG+TGG | + | chr4.4:66428755-66428774 | MS.gene54918:intron | 40.0% | |
| TTGGCCTCATATTCAGCATA+TGG | + | chr4.4:66430761-66430780 | MS.gene54918:CDS | 40.0% | |
| TTGTTCTCATGCATTCACCT+TGG | + | chr4.4:66431355-66431374 | MS.gene54918:CDS | 40.0% | |
| TTTACAACTCCTCCTGCAAT+TGG | + | chr4.4:66429706-66429725 | MS.gene54918:CDS | 40.0% | |
| TTTCCAACAGTCCATATCCA+AGG | - | chr4.4:66430470-66430489 | None:intergenic | 40.0% | |
| ! | ACTGATGTAGCATGCTTTTC+AGG | + | chr4.4:66430266-66430285 | MS.gene54918:intron | 40.0% |
| ! | AGAACACAACAAGGCAGTTT+TGG | + | chr4.4:66429683-66429702 | MS.gene54918:CDS | 40.0% |
| ! | GGAGCTGATAGATCTTTTAC+GGG | - | chr4.4:66431674-66431693 | None:intergenic | 40.0% |
| ! | GGGAGCTGATAGATCTTTTA+CGG | - | chr4.4:66431675-66431694 | None:intergenic | 40.0% |
| ! | TAACATGCCTTCAGGTTACA+AGG | + | chr4.4:66431116-66431135 | MS.gene54918:intron | 40.0% |
| ! | TGAGGTTTGGAATCATCAAC+CGG | - | chr4.4:66432250-66432269 | None:intergenic | 40.0% |
| ! | TTGTTGCGTTGATGTTGCAT+AGG | + | chr4.4:66428647-66428666 | MS.gene54918:intron | 40.0% |
| !! | CACAAAGTACTTCACCCTTT+TGG | + | chr4.4:66430702-66430721 | MS.gene54918:CDS | 40.0% |
| !! | GTTGATGATTCCAAACCTCA+TGG | + | chr4.4:66432250-66432269 | MS.gene54918:CDS | 40.0% |
| !! | TGTTGAGGAGCATTATAACC+AGG | - | chr4.4:66428494-66428513 | None:intergenic | 40.0% |
| AAGAGCTACCGAGAGTTAAC+AGG | + | chr4.4:66431313-66431332 | MS.gene54918:CDS | 45.0% | |
| AGACATTGAAGAAGAGGGAG+GGG | + | chr4.4:66429262-66429281 | MS.gene54918:intron | 45.0% | |
| AGAGAGATCATTTGTCCACG+TGG | - | chr4.4:66431167-66431186 | None:intergenic | 45.0% | |
| ATACGGAAATGGACACGACA+CGG | + | chr4.4:66429852-66429871 | MS.gene54918:intron | 45.0% | |
| ATGAAGCACGGATACGGAAA+TGG | + | chr4.4:66429841-66429860 | MS.gene54918:intron | 45.0% | |
| ATGCGACTAAAATGCACTCG+TGG | + | chr4.4:66428691-66428710 | MS.gene54918:intron | 45.0% | |
| ATGTTAGGTGGGATACTTGG+GGG | + | chr4.4:66430414-66430433 | MS.gene54918:CDS | 45.0% | |
| CCAAATGTGTATGGCACATC+AGG | - | chr4.4:66429733-66429752 | None:intergenic | 45.0% | |
| CCTGATGTGCCATACACATT+TGG | + | chr4.4:66429730-66429749 | MS.gene54918:CDS | 45.0% | |
| CTGGAGCGAAATCAAGTTCA+TGG | - | chr4.4:66430493-66430512 | None:intergenic | 45.0% | |
| GAAAGCAGTGATCGTATCGT+GGG | + | chr4.4:66429387-66429406 | MS.gene54918:CDS | 45.0% | |
| GCATTTAGAGAAGCCAGCTT+TGG | + | chr4.4:66432109-66432128 | MS.gene54918:CDS | 45.0% | |
| GGACACATGCTTACTATAGC+TGG | + | chr4.4:66432158-66432177 | MS.gene54918:CDS | 45.0% | |
| TCAATGGGAACCATGAGGTT+TGG | - | chr4.4:66432263-66432282 | None:intergenic | 45.0% | |
| TCTTCAAGCCACGCATATTG+TGG | - | chr4.4:66431294-66431313 | None:intergenic | 45.0% | |
| ! | CAACCTTGGATATGGACTGT+TGG | + | chr4.4:66430464-66430483 | MS.gene54918:CDS | 45.0% |
| ! | GAGGTTTGGAATCATCAACC+GGG | - | chr4.4:66432249-66432268 | None:intergenic | 45.0% |
| !! | GGAGTGTTGCTTATCAACCT+TGG | + | chr4.4:66430450-66430469 | MS.gene54918:CDS | 45.0% |
| !! | GTATGGTATCGGTGCGAAAA+AGG | - | chr4.4:66430668-66430687 | None:intergenic | 45.0% |
| !! | TGAGGAGCATTATAACCAGG+AGG | - | chr4.4:66428491-66428510 | None:intergenic | 45.0% |
| !!! | GATGTTTTTAGGGTTCCTCC+TGG | + | chr4.4:66428473-66428492 | MS.gene54918:CDS | 45.0% |
| !!! | GCATGCTTTTCAGGTGATCT+TGG | + | chr4.4:66430275-66430294 | MS.gene54918:intron | 45.0% |
| AATGCTGAGTACTCTGGCTG+TGG | - | chr4.4:66432094-66432113 | None:intergenic | 50.0% | |
| ACATCAGGACCAATTGCAGG+AGG | - | chr4.4:66429718-66429737 | None:intergenic | 50.0% | |
| ACCTCTATGCTAACACCACG+TGG | + | chr4.4:66431149-66431168 | MS.gene54918:intron | 50.0% | |
| ATCATGGTCACCCGTTGTCA+CGG | + | chr4.4:66428961-66428980 | MS.gene54918:intron | 50.0% | |
| CGGTGCGAAAAAGGCTTGAA+TGG | - | chr4.4:66430659-66430678 | None:intergenic | 50.0% | |
| GACATTGAAGAAGAGGGAGG+GGG | + | chr4.4:66429263-66429282 | MS.gene54918:intron | 50.0% | |
| GGAAAGCAGTGATCGTATCG+TGG | + | chr4.4:66429386-66429405 | MS.gene54918:CDS | 50.0% | |
| GGAGATGGAGGGAATATCGA+AGG | + | chr4.4:66431710-66431729 | MS.gene54918:CDS | 50.0% | |
| ! | TCCACGTGGTGTTAGCATAG+AGG | - | chr4.4:66431153-66431172 | None:intergenic | 50.0% |
| AGAAGAGGGAGGGGGTTTCT+TGG | + | chr4.4:66429271-66429290 | MS.gene54918:intron | 55.0% | |
| GACAGAGGATGAACCAGGGT+CGG | + | chr4.4:66429411-66429430 | MS.gene54918:CDS | 55.0% | |
| GATCGTATCGTGGGTGACAG+AGG | + | chr4.4:66429396-66429415 | MS.gene54918:CDS | 55.0% | |
| GGCACATCAGGACCAATTGC+AGG | - | chr4.4:66429721-66429740 | None:intergenic | 55.0% | |
| GGGTGACAGAGGATGAACCA+GGG | + | chr4.4:66429407-66429426 | MS.gene54918:CDS | 55.0% | |
| TGCGACTAGGACCGTGACAA+CGG | - | chr4.4:66428975-66428994 | None:intergenic | 55.0% | |
| TGGGTGACAGAGGATGAACC+AGG | + | chr4.4:66429406-66429425 | MS.gene54918:CDS | 55.0% | |
| TTAGGTGGGATACTTGGGGG+AGG | + | chr4.4:66430417-66430436 | MS.gene54918:CDS | 55.0% | |
| CTTGGGGGAGGTTTGCAGAG+AGG | + | chr4.4:66430429-66430448 | MS.gene54918:CDS | 60.0% | |
| GCGACTAGGACCGTGACAAC+GGG | - | chr4.4:66428974-66428993 | None:intergenic | 60.0% | |
| GGTCGGATGCAGTGCGTTAC+TGG | + | chr4.4:66429428-66429447 | MS.gene54918:CDS | 60.0% | |
| TAACGCACTGCATCCGACCC+TGG | - | chr4.4:66429427-66429446 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 66428458 | 66432282 | 66428458 | ID=MS.gene54918 |
| chr4.4 | mRNA | 66428458 | 66432282 | 66428458 | ID=MS.gene54918.t1;Parent=MS.gene54918 |
| chr4.4 | exon | 66428458 | 66428514 | 66428458 | ID=MS.gene54918.t1.exon1;Parent=MS.gene54918.t1 |
| chr4.4 | CDS | 66428458 | 66428514 | 66428458 | ID=cds.MS.gene54918.t1;Parent=MS.gene54918.t1 |
| chr4.4 | exon | 66429358 | 66429558 | 66429358 | ID=MS.gene54918.t1.exon2;Parent=MS.gene54918.t1 |
| chr4.4 | CDS | 66429358 | 66429558 | 66429358 | ID=cds.MS.gene54918.t1;Parent=MS.gene54918.t1 |
| chr4.4 | exon | 66429649 | 66429760 | 66429649 | ID=MS.gene54918.t1.exon3;Parent=MS.gene54918.t1 |
| chr4.4 | CDS | 66429649 | 66429760 | 66429649 | ID=cds.MS.gene54918.t1;Parent=MS.gene54918.t1 |
| chr4.4 | exon | 66430288 | 66430517 | 66430288 | ID=MS.gene54918.t1.exon4;Parent=MS.gene54918.t1 |
| chr4.4 | CDS | 66430288 | 66430517 | 66430288 | ID=cds.MS.gene54918.t1;Parent=MS.gene54918.t1 |
| chr4.4 | exon | 66430644 | 66430782 | 66430644 | ID=MS.gene54918.t1.exon5;Parent=MS.gene54918.t1 |
| chr4.4 | CDS | 66430644 | 66430782 | 66430644 | ID=cds.MS.gene54918.t1;Parent=MS.gene54918.t1 |
| chr4.4 | exon | 66431280 | 66431500 | 66431280 | ID=MS.gene54918.t1.exon6;Parent=MS.gene54918.t1 |
| chr4.4 | CDS | 66431280 | 66431500 | 66431280 | ID=cds.MS.gene54918.t1;Parent=MS.gene54918.t1 |
| chr4.4 | exon | 66431623 | 66431744 | 66431623 | ID=MS.gene54918.t1.exon7;Parent=MS.gene54918.t1 |
| chr4.4 | CDS | 66431623 | 66431744 | 66431623 | ID=cds.MS.gene54918.t1;Parent=MS.gene54918.t1 |
| chr4.4 | exon | 66432081 | 66432282 | 66432081 | ID=MS.gene54918.t1.exon8;Parent=MS.gene54918.t1 |
| chr4.4 | CDS | 66432081 | 66432282 | 66432081 | ID=cds.MS.gene54918.t1;Parent=MS.gene54918.t1 |
| Gene Sequence |
| Protein sequence |
