AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56025

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56025.t1 MTR_2g034810 95.016 923 26 1 1 903 1 923 0.0 1791
MS.gene56025.t1 MTR_7g112030 33.298 952 534 26 6 901 2 908 7.00e-118 381
MS.gene56025.t1 MTR_1g083850 30.262 879 442 36 60 900 2 747 3.26e-70 248
MS.gene56025.t1 MTR_7g082220 25.858 437 223 14 510 903 559 937 3.63e-18 90.5
MS.gene56025.t1 MTR_6g018770 25.634 355 216 12 569 901 550 878 3.34e-14 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56025.t1 AT3G58650 31.813 921 476 31 12 901 11 810 9.56e-99 328
MS.gene56025.t1 AT5G26910 30.719 918 518 28 6 901 5 826 6.66e-90 304
MS.gene56025.t1 AT5G26910 30.719 918 518 28 6 901 5 826 6.66e-90 304
MS.gene56025.t1 AT5G26910 30.610 918 518 28 6 901 5 825 9.91e-90 304
MS.gene56025.t1 AT5G26910 32.779 601 314 20 6 590 5 531 1.32e-51 192
MS.gene56025.t1 AT3G05750 38.365 159 92 2 744 901 637 790 1.03e-22 104
MS.gene56025.t1 AT3G05750 38.365 159 92 2 744 901 542 695 1.03e-22 104
MS.gene56025.t1 AT3G05750 38.365 159 92 2 744 901 542 695 1.03e-22 104
MS.gene56025.t1 AT3G05750 38.365 159 92 2 744 901 645 798 1.24e-22 104
MS.gene56025.t1 AT1G67040 31.466 232 123 12 12 222 28 244 2.10e-11 68.6
MS.gene56025.t1 AT1G67040 31.466 232 123 12 12 222 28 244 2.27e-11 68.2

Find 184 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATTGATCTTGCCGATTT+TGG 0.126247 2.3:-56054641 None:intergenic
CCCTCAACTTCTGTTCTAAA+AGG 0.206450 2.3:-56055864 None:intergenic
GATTCTCAGTTTCTATATTC+TGG 0.225407 2.3:+56054512 MS.gene56025:CDS
ACAAAACCGGGATTCTTAAT+AGG 0.234211 2.3:-56054689 None:intergenic
TGATCAAATATTTAATTCTT+TGG 0.234441 2.3:+56057134 MS.gene56025:CDS
TAATAGGGGACAAAAGTTTA+TGG 0.239442 2.3:-56054673 None:intergenic
GATTCTTCTTTGAATAATAA+AGG 0.253439 2.3:+56055076 MS.gene56025:CDS
GAGGTTGATGCTTATGAATT+TGG 0.255705 2.3:+56057099 MS.gene56025:CDS
GGATTGCTGCTCCTTGTTAA+TGG 0.259788 2.3:-56055700 None:intergenic
CAATGTTGAGTTAATGTATA+TGG 0.277411 2.3:+56056741 MS.gene56025:CDS
TAATGTAGTTGCAAGGCTTA+TGG 0.290220 2.3:+56054415 MS.gene56025:CDS
TTATGTTTCAATGATGATTC+TGG 0.299384 2.3:-56056036 None:intergenic
CCAATTACATTGTATCCTAT+TGG 0.304963 2.3:-56055823 None:intergenic
CCAATAGGATACAATGTAAT+TGG 0.307017 2.3:+56055823 MS.gene56025:CDS
CAACAATCCTGCTTATATAA+TGG 0.326959 2.3:+56054718 MS.gene56025:CDS
CAATGATGATTCTGGAAGAT+TGG 0.328218 2.3:-56056028 None:intergenic
AATCCAACCACTTTCCATAT+TGG 0.332576 2.3:-56057074 None:intergenic
TGAGAACATTAGAAGAATTC+TGG 0.343239 2.3:-56055267 None:intergenic
AATGTAGTTGCAAGGCTTAT+GGG 0.343622 2.3:+56054416 MS.gene56025:CDS
TCTAAAGTTAACCTCAATCT+AGG 0.348348 2.3:+56055925 MS.gene56025:CDS
CTCCCTTTCGGCTTTCCAAC+TGG 0.349402 2.3:-56056813 None:intergenic
CAAAACCGGGATTCTTAATA+GGG 0.350999 2.3:-56054688 None:intergenic
AGCAAAGGCTAAAGCGCATT+TGG 0.352932 2.3:+56054778 MS.gene56025:CDS
AAAAGTTTATGGTGTGTAAC+AGG 0.355362 2.3:-56054662 None:intergenic
TTTGCCTCCTTCCGGTTTCT+CGG 0.358423 2.3:+56054448 MS.gene56025:CDS
GGGATCTTCTAGCAATTTCA+TGG 0.358544 2.3:+56054556 MS.gene56025:CDS
TTAGATTCTTTGCCTCCTTC+CGG 0.359642 2.3:+56054440 MS.gene56025:CDS
GGCAATGAGGCATCCCTATC+TGG 0.361323 2.3:+56054191 MS.gene56025:CDS
ACGACTGGAGATTCCTCTTA+TGG 0.366120 2.3:+56055385 MS.gene56025:CDS
AGATCAAGATATGTCGTTTA+CGG 0.368642 2.3:+56055963 MS.gene56025:CDS
AAGGATATGAGTAGCCAATA+TGG 0.377746 2.3:+56057060 MS.gene56025:CDS
GACCGGTGGCAGAAATTTGA+TGG 0.381328 2.3:+56055162 MS.gene56025:CDS
ATAAGCCTTGCAACTACATT+AGG 0.385722 2.3:-56054413 None:intergenic
AATTTGCATAGGAAATCTTC+TGG 0.387773 2.3:+56055244 MS.gene56025:CDS
GGAGACTTAACAGATGTTTC+CGG 0.393264 2.3:-56055037 None:intergenic
CGCTCTTGAAACCTCCCTTT+CGG 0.395032 2.3:-56056825 None:intergenic
GAATGCTGTGAAGTGTTTAC+AGG 0.396936 2.3:+56054982 MS.gene56025:CDS
ATTCTTCTTTGAATAATAAA+GGG 0.413579 2.3:+56055077 MS.gene56025:CDS
GATTGATATTGCTACCAGAT+AGG 0.414071 2.3:-56054205 None:intergenic
ATAGAAACTGAGAATCTTGA+AGG 0.414969 2.3:-56054505 None:intergenic
CTAGTGAGTAATAAACAATA+TGG 0.417569 2.3:+56055619 MS.gene56025:CDS
TGTCATTATTATCAATTGAA+TGG 0.417904 2.3:-56055312 None:intergenic
ATTTGCCTTAGGTGGTTGAT+TGG 0.419546 2.3:-56055212 None:intergenic
TTGGAAACCAATGGCTTAGA+TGG 0.421919 2.3:-56055343 None:intergenic
TAATTTCTTACGCGATTTCG+AGG 0.425164 2.3:-56053996 None:intergenic
AGAAGTATTGCCTCCAAAAT+CGG 0.425187 2.3:+56054628 MS.gene56025:CDS
GTTAACTTTAGAAACATCAT+TGG 0.426304 2.3:-56055914 None:intergenic
GACAATCTTTGAACAAAAGC+TGG 0.430363 2.3:+56055005 MS.gene56025:CDS
GGATACAAAATGTGGACAAA+AGG 0.432659 2.3:+56056934 MS.gene56025:CDS
CATCATTGAAACATAAATCA+TGG 0.434027 2.3:+56056043 MS.gene56025:CDS
ATATGCAGAGTCATTGAAAC+AGG 0.439142 2.3:+56054146 MS.gene56025:intron
GCTTCTATGCCGTCCATAAG+AGG 0.439709 2.3:-56055398 None:intergenic
ATTGTTGGATGGAACAAAAC+CGG 0.440286 2.3:-56054702 None:intergenic
ATGAAGACGAAAATGGTGTT+GGG 0.440544 2.3:+56054318 MS.gene56025:CDS
GAAAGGGATGAGAGATTCAA+TGG 0.441206 2.3:+56057020 MS.gene56025:CDS
TCTAGGAAAATTATTTGTCC+TGG 0.441310 2.3:-56055509 None:intergenic
CGCTTTAGCCTTTGCTTGCG+AGG 0.443828 2.3:-56054771 None:intergenic
CCGCAAGAATTCTTGAACCT+GGG 0.445062 2.3:+56054747 MS.gene56025:CDS
ACTGAAGATGTCGCAATAAG+AGG 0.450581 2.3:-56054866 None:intergenic
AGAATTCTTCTAATGTTCTC+AGG 0.451320 2.3:+56055269 MS.gene56025:CDS
GTTTCTATATTCTGGAAAGT+TGG 0.452052 2.3:+56054520 MS.gene56025:CDS
CTCTCATCTGTTCAACCAGT+TGG 0.456145 2.3:+56056798 MS.gene56025:CDS
GCCCATCAAATTTCTGCCAC+CGG 0.457784 2.3:-56055164 None:intergenic
GGTTGATGAGCTTGTGGATA+AGG 0.459758 2.3:+56057041 MS.gene56025:CDS
CATGGAGTCAAAGCCTCAAA+AGG 0.460709 2.3:+56054574 MS.gene56025:CDS
GTAATTGGCGGCGATGCCTT+AGG 0.460790 2.3:+56055838 MS.gene56025:CDS
CTCACTAGATTTGACTTCGC+TGG 0.460882 2.3:-56055604 None:intergenic
CCTCATTGCCACATTGTGGT+TGG 0.464011 2.3:-56054178 None:intergenic
GAAGGCTCAAGAACTGAGAT+TGG 0.465982 2.3:-56056354 None:intergenic
GACAATACAAGGTCTCCAAT+AGG 0.471049 2.3:+56055808 MS.gene56025:CDS
TTGAGATGTAGAAGTTATGT+TGG 0.471928 2.3:+56056907 MS.gene56025:CDS
TTCTGAGCATTTGCCTTAGG+TGG 0.472013 2.3:-56055220 None:intergenic
TGATTGTGTGAGCGAATGTA+TGG 0.472443 2.3:+56056882 MS.gene56025:CDS
TGTCGAGGTGTCACAGAACC+TGG 0.473644 2.3:-56055721 None:intergenic
TGGAAAGTGGTTGGATTATG+AGG 0.473906 2.3:+56057080 MS.gene56025:CDS
AAATGGTGAAAAGAAAAGAT+TGG 0.475344 2.3:+56056962 MS.gene56025:CDS
TCAAGAACTGAGATTGGACT+TGG 0.479255 2.3:-56056348 None:intergenic
GCCGCAAGAATTCTTGAACC+TGG 0.480122 2.3:+56054746 MS.gene56025:CDS
ACGATGAATCGAGGTTAGAA+AGG 0.482334 2.3:+56056848 MS.gene56025:CDS
CATTATATAAGCAGGATTGT+TGG 0.482949 2.3:-56054717 None:intergenic
CATCATCGACGGTCTCACTA+AGG 0.485114 2.3:+56054801 MS.gene56025:CDS
CAAAAGTGAATGTTCAAAGA+AGG 0.486529 2.3:+56055125 MS.gene56025:CDS
TCCATTGTAAAATCTAAAGT+TGG 0.489151 2.3:+56055433 MS.gene56025:CDS
CAGGTCGATGAAGACGAAAA+TGG 0.491401 2.3:+56054311 MS.gene56025:intron
CGAGTAGGGATCCGAGAAAC+CGG 0.493083 2.3:-56054459 None:intergenic
CTGAGATTGGACTTGGTTGT+CGG 0.498616 2.3:-56056341 None:intergenic
TTGTCCCCTATTAAGAATCC+CGG 0.498971 2.3:+56054683 MS.gene56025:CDS
TTTAGAAACATCATTGGAAG+AGG 0.499066 2.3:-56055908 None:intergenic
GATACAAAATGTGGACAAAA+GGG 0.500320 2.3:+56056935 MS.gene56025:CDS
CAACCTCGCGAGATCGGCCG+AGG 0.502849 2.3:-56056771 None:intergenic
GGTTAAAGATCTTAGAGATA+AGG 0.502958 2.3:+56054823 MS.gene56025:CDS
TTGGTAGATCATCGACTACA+TGG 0.505047 2.3:+56056689 MS.gene56025:CDS
GAATACTAATGATCTTTCGT+TGG 0.507943 2.3:+56055753 MS.gene56025:CDS
ATTGATATTGCTACCAGATA+GGG 0.509200 2.3:-56054204 None:intergenic
ATCAGTACCATCTAAGCCAT+TGG 0.511226 2.3:+56055336 MS.gene56025:CDS
GGTGAAAAGAAAAGATTGGT+TGG 0.512637 2.3:+56056966 MS.gene56025:CDS
TAAAGATCTTAGAGATAAGG+TGG 0.516276 2.3:+56054826 MS.gene56025:CDS
AGATGTAGAAGTTATGTTGG+TGG 0.518076 2.3:+56056910 MS.gene56025:CDS
TTAACAAGGAGCAGCAATCC+AGG 0.521935 2.3:+56055703 MS.gene56025:CDS
GGTGTTGGGGAATATGTTAG+AGG 0.527966 2.3:+56054332 MS.gene56025:CDS
AGTTTACAACCTCGCGAGAT+CGG 0.529804 2.3:-56056777 None:intergenic
AAAGGTCTACAGACAAGGAC+TGG 0.530185 2.3:+56055536 MS.gene56025:CDS
AGGGAAGGTTTGAGTTCGAC+CGG 0.531361 2.3:+56055145 MS.gene56025:CDS
GTGGACAAAAGGGTTTGAAA+TGG 0.534070 2.3:+56056945 MS.gene56025:CDS
CAGCTTCTTCAACATCAACT+AGG 0.535267 2.3:+56056623 MS.gene56025:CDS
TCTTTGAACAAAAGCTGGAA+TGG 0.535359 2.3:+56055010 MS.gene56025:CDS
TGTAGAAGTTATGTTGGTGG+AGG 0.536172 2.3:+56056913 MS.gene56025:CDS
CAAAAGCTGGAATGGAGCAC+CGG 0.536269 2.3:+56055018 MS.gene56025:CDS
GCAGCCTCCATTATATAAGC+AGG 0.537047 2.3:-56054725 None:intergenic
GATGAAGACGAAAATGGTGT+TGG 0.540397 2.3:+56054317 MS.gene56025:CDS
AGCGCATTTGGCATCATCGA+CGG 0.545183 2.3:+56054790 MS.gene56025:CDS
TCTGTTGCAATCCTAGATTG+AGG 0.548612 2.3:-56055936 None:intergenic
GTGAATGTTCAAAGAAGGGA+AGG 0.551174 2.3:+56055130 MS.gene56025:CDS
GCCTTTGCTTGCGAGGACCC+AGG 0.551658 2.3:-56054764 None:intergenic
AAAAGTGAATGTTCAAAGAA+GGG 0.552284 2.3:+56055126 MS.gene56025:CDS
TTGTTGGATGGAACAAAACC+GGG 0.552886 2.3:-56054701 None:intergenic
ATCATTGAAACATAAATCAT+GGG 0.554865 2.3:+56056044 MS.gene56025:CDS
CAAGGTAGAAAAGTTACGAC+TGG 0.558357 2.3:+56055370 MS.gene56025:CDS
ATTCAATCTCAAGAAATCCA+TGG 0.560466 2.3:+56056544 MS.gene56025:CDS
TTCAATGGTTGATGAGCTTG+TGG 0.560544 2.3:+56057035 MS.gene56025:CDS
GCATCAAAGTCAGATTTACC+AGG 0.565084 2.3:+56054022 MS.gene56025:CDS
AACCAGTTGGAAAGCCGAAA+GGG 0.565232 2.3:+56056811 MS.gene56025:CDS
GAAATCCAATCAACCACCTA+AGG 0.567150 2.3:+56055207 MS.gene56025:CDS
ACCTGGGTCCTCGCAAGCAA+AGG 0.567806 2.3:+56054763 MS.gene56025:CDS
TTCCCTCGGCCGATCTCGCG+AGG 0.570693 2.3:+56056768 MS.gene56025:CDS
ACCGGTGGCAGAAATTTGAT+GGG 0.573900 2.3:+56055163 MS.gene56025:CDS
CAACCAGTTGGAAAGCCGAA+AGG 0.574265 2.3:+56056810 MS.gene56025:CDS
TAGCCAATATGGAAAGTGGT+TGG 0.575562 2.3:+56057071 MS.gene56025:CDS
CCCAGGTTCAAGAATTCTTG+CGG 0.576295 2.3:-56054747 None:intergenic
AAGGTGGATTCTTCGCAGAA+AGG 0.577846 2.3:+56054842 MS.gene56025:CDS
ATATAAGCAGGATTGTTGGA+TGG 0.580763 2.3:-56054713 None:intergenic
TGCTTGATACAGACAATACA+AGG 0.581399 2.3:+56055797 MS.gene56025:CDS
TGAGTAATAAACAATATGGT+GGG 0.582248 2.3:+56055623 MS.gene56025:CDS
TGAGTAGCCAATATGGAAAG+TGG 0.584195 2.3:+56057067 MS.gene56025:CDS
ATAGGATACAATGTAATTGG+CGG 0.584996 2.3:+56055826 MS.gene56025:CDS
ATGTTTGCAGGGTGATGAGA+TGG 0.589624 2.3:+56056299 MS.gene56025:intron
GAATCTTCTTCTGCGTGTGT+AGG 0.589839 2.3:-56055058 None:intergenic
TGATGTTGAAGAAGCTGAGT+CGG 0.591186 2.3:-56056617 None:intergenic
GTGAGTAATAAACAATATGG+TGG 0.591690 2.3:+56055622 MS.gene56025:CDS
GTTGGCAAAAGATGTGTACA+AGG 0.591952 2.3:+56056984 MS.gene56025:CDS
ATCATCGACGGTCTCACTAA+GGG 0.595032 2.3:+56054802 MS.gene56025:CDS
CCATTGGTTTCCAACTCGCA+AGG 0.595241 2.3:+56055352 MS.gene56025:CDS
CAATCCTGCTTATATAATGG+AGG 0.595285 2.3:+56054721 MS.gene56025:CDS
TCGAGGTCCAATCAAACAAG+TGG 0.595809 2.3:-56053979 None:intergenic
GTATTCTTTCCACCTTGTCG+AGG 0.598057 2.3:-56055736 None:intergenic
GCGGATGTTATCAGTACAGA+AGG 0.607854 2.3:+56056411 MS.gene56025:CDS
CATTCACTACACCATTAACA+AGG 0.608076 2.3:+56055689 MS.gene56025:CDS
CTGTTCTAAAAGGATACCTA+AGG 0.611780 2.3:-56055854 None:intergenic
TCTCATCAGAATCTACTCAA+AGG 0.615246 2.3:+56054948 MS.gene56025:CDS
GATGCCTCATTGCCACATTG+TGG 0.615333 2.3:-56054182 None:intergenic
CCAACCACAATGTGGCAATG+AGG 0.619928 2.3:+56054178 MS.gene56025:CDS
CCTTGCGAGTTGGAAACCAA+TGG 0.620891 2.3:-56055352 None:intergenic
ACTATGATAAAGAAGCAGAC+AGG 0.622027 2.3:+56056646 MS.gene56025:CDS
TAGAAACTGAGAATCTTGAA+GGG 0.623762 2.3:-56054504 None:intergenic
GGACGGCATAGAAGCTCAAG+TGG 0.631619 2.3:+56055406 MS.gene56025:CDS
AATTTCTCAAAGAAGAAGCA+AGG 0.634224 2.3:+56054925 MS.gene56025:CDS
ACACTTCACAGCATTCGACT+CGG 0.634714 2.3:-56054975 None:intergenic
CTGGAGATTCCTCTTATGGA+CGG 0.637212 2.3:+56055389 MS.gene56025:CDS
TAGGGATCCGAGAAACCGGA+AGG 0.638892 2.3:-56054455 None:intergenic
GACAGTTTAAACAGTAGCTG+TGG 0.639820 2.3:+56055985 MS.gene56025:CDS
CAGTTGGAAAGCCGAAAGGG+AGG 0.641527 2.3:+56056814 MS.gene56025:CDS
GAGCTCCTAATGTAGTTGCA+AGG 0.641567 2.3:+56054408 MS.gene56025:CDS
AACTCTGCATCAGATTCAGT+AGG 0.641798 2.3:-56056592 None:intergenic
AAAGAAAAGGTCTACAGACA+AGG 0.643351 2.3:+56055531 MS.gene56025:CDS
AATGCTGTGAAGTGTTTACA+GGG 0.647568 2.3:+56054983 MS.gene56025:CDS
TGAAGACGAAAATGGTGTTG+GGG 0.648206 2.3:+56054319 MS.gene56025:CDS
TGGTAGATCATCGACTACAT+GGG 0.651366 2.3:+56056690 MS.gene56025:CDS
CTGTGAATCCTCGATGAGCG+CGG 0.653212 2.3:+56056392 MS.gene56025:CDS
GAAGGTTTGAGTTCGACCGG+TGG 0.655900 2.3:+56055148 MS.gene56025:CDS
GATAACATCCGCGCTCATCG+AGG 0.659096 2.3:-56056400 None:intergenic
AAAATGAAATTCTATACACC+AGG 0.659647 2.3:+56055491 MS.gene56025:CDS
TCAAGAGCGACGATGAATCG+AGG 0.661200 2.3:+56056839 MS.gene56025:CDS
AAGAAAATCCAACCACAATG+TGG 0.662792 2.3:+56054170 MS.gene56025:CDS
CAGCTTTCAACCGAAAACGA+AGG 0.668426 2.3:-56056372 None:intergenic
TGATTCTGGAAGATTGGTCA+AGG 0.670057 2.3:-56056022 None:intergenic
AAGTTGAGGGAATTGACAAG+TGG 0.671342 2.3:+56055877 MS.gene56025:CDS
GGTTCTGTGACACCTCGACA+AGG 0.671483 2.3:+56055724 MS.gene56025:CDS
GGATCCGAGAAACCGGAAGG+AGG 0.677160 2.3:-56054452 None:intergenic
AACCTCGCGAGATCGGCCGA+GGG 0.686140 2.3:-56056770 None:intergenic
AAAACCGGGATTCTTAATAG+GGG 0.690424 2.3:-56054687 None:intergenic
TTGGTGGAGGATACAAAATG+TGG 0.699477 2.3:+56056926 MS.gene56025:CDS
TCTGTGACACCTCGACAAGG+TGG 0.707322 2.3:+56055727 MS.gene56025:CDS
TGTCGGCAATTGAATGACAG+TGG 0.709419 2.3:-56056324 None:intergenic
TCTGTTACAAGTGATGACTG+TGG 0.759389 2.3:+56054380 MS.gene56025:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAATAATCACTTAAATA+TGG - chr2.3:56056085-56056104 None:intergenic 15.0%
!! ATTCTTCTTTGAATAATAAA+GGG + chr2.3:56055077-56055096 MS.gene56025:CDS 15.0%
!! TGATCAAATATTTAATTCTT+TGG + chr2.3:56057134-56057153 MS.gene56025:CDS 15.0%
!!! AGTGATTATTCAATAATTTT+TGG - chr2.3:56056215-56056234 None:intergenic 15.0%
!!! ATAATCACTCTTTTATTAAT+TGG + chr2.3:56056226-56056245 MS.gene56025:intron 15.0%
!!! TTAATTTCATCTTTTGTTAT+TGG + chr2.3:56054104-56054123 MS.gene56025:intron 15.0%
!!! TTTTACTGTATATATTTTTC+AGG + chr2.3:56056502-56056521 MS.gene56025:intron 15.0%
!! AAAACCATAAACAAAAAGTT+AGG + chr2.3:56056152-56056171 MS.gene56025:intron 20.0%
!! ATCATTGAAACATAAATCAT+GGG + chr2.3:56056044-56056063 MS.gene56025:CDS 20.0%
!! ATTATATGTTTAATTGTTCC+AGG + chr2.3:56054292-56054311 MS.gene56025:intron 20.0%
!! GATTCTTCTTTGAATAATAA+AGG + chr2.3:56055076-56055095 MS.gene56025:CDS 20.0%
!! TGTCATTATTATCAATTGAA+TGG - chr2.3:56055315-56055334 None:intergenic 20.0%
!!! ATAATTTTCCTAGAAAGAAA+AGG + chr2.3:56055518-56055537 MS.gene56025:CDS 20.0%
!!! GCTAAATTTATACTTTTTGA+TGG + chr2.3:56056178-56056197 MS.gene56025:intron 20.0%
! AAAAGTGAATGTTCAAAGAA+GGG + chr2.3:56055126-56055145 MS.gene56025:CDS 25.0%
! AAAATGAAATTCTATACACC+AGG + chr2.3:56055491-56055510 MS.gene56025:CDS 25.0%
! AAATGGTGAAAAGAAAAGAT+TGG + chr2.3:56056962-56056981 MS.gene56025:CDS 25.0%
! CAATGTTGAGTTAATGTATA+TGG + chr2.3:56056741-56056760 MS.gene56025:CDS 25.0%
! CATCATTGAAACATAAATCA+TGG + chr2.3:56056043-56056062 MS.gene56025:CDS 25.0%
! CTAGTGAGTAATAAACAATA+TGG + chr2.3:56055619-56055638 MS.gene56025:CDS 25.0%
! CTTAAAAAGTTACTGTAGTT+TGG + chr2.3:56056443-56056462 MS.gene56025:intron 25.0%
! GTATAATGTCATCAGTTTAA+TGG + chr2.3:56056127-56056146 MS.gene56025:intron 25.0%
! TCCTTGAAAAATTAAATCCA+TGG - chr2.3:56056564-56056583 None:intergenic 25.0%
! TGAGTAATAAACAATATGGT+GGG + chr2.3:56055623-56055642 MS.gene56025:CDS 25.0%
! TGAGTTAATGACTTACTTAA+TGG - chr2.3:56056276-56056295 None:intergenic 25.0%
! TTAATTTAATGACACATGAG+TGG + chr2.3:56056473-56056492 MS.gene56025:intron 25.0%
! TTATGTTTCAATGATGATTC+TGG - chr2.3:56056039-56056058 None:intergenic 25.0%
!! ACATTTTCTATGATGAAGTT+TGG + chr2.3:56056670-56056689 MS.gene56025:CDS 25.0%
!! ATCACTCTTTTATTAATTGG+TGG + chr2.3:56056229-56056248 MS.gene56025:intron 25.0%
!! GTTAACTTTAGAAACATCAT+TGG - chr2.3:56055917-56055936 None:intergenic 25.0%
!! TAGAATTTCATTTTCGCTAT+CGG - chr2.3:56055485-56055504 None:intergenic 25.0%
!! TCCAACTTTAGATTTTACAA+TGG - chr2.3:56055437-56055456 None:intergenic 25.0%
!! TCCATTGTAAAATCTAAAGT+TGG + chr2.3:56055433-56055452 MS.gene56025:CDS 25.0%
!!! AAGGAAATTTTGAGTTTGAA+AGG + chr2.3:56057003-56057022 MS.gene56025:CDS 25.0%
!!! AGGAAATTTTGAGTTTGAAA+GGG + chr2.3:56057004-56057023 MS.gene56025:CDS 25.0%
!!! TCCATGGATTTAATTTTTCA+AGG + chr2.3:56056560-56056579 MS.gene56025:CDS 25.0%
!!! TCTCTTTGAAACTTTTCAAT+TGG - chr2.3:56054611-56054630 None:intergenic 25.0%
AAAAGTTTATGGTGTGTAAC+AGG - chr2.3:56054665-56054684 None:intergenic 30.0%
AATACAATTGACAACTGACA+AGG - chr2.3:56054072-56054091 None:intergenic 30.0%
AATTTCTCAAAGAAGAAGCA+AGG + chr2.3:56054925-56054944 MS.gene56025:CDS 30.0%
AATTTGCATAGGAAATCTTC+TGG + chr2.3:56055244-56055263 MS.gene56025:CDS 30.0%
AGAAGTGAAAAAGAAAGACA+TGG + chr2.3:56055651-56055670 MS.gene56025:CDS 30.0%
AGAATTCTTCTAATGTTCTC+AGG + chr2.3:56055269-56055288 MS.gene56025:CDS 30.0%
ATACAATTGACAACTGACAA+GGG - chr2.3:56054071-56054090 None:intergenic 30.0%
ATAGAAACTGAGAATCTTGA+AGG - chr2.3:56054508-56054527 None:intergenic 30.0%
ATAGGATACAATGTAATTGG+CGG + chr2.3:56055826-56055845 MS.gene56025:CDS 30.0%
ATGCTCAGAAAAATTTGCAT+AGG + chr2.3:56055233-56055252 MS.gene56025:CDS 30.0%
ATTAACTCAAAGATGTTTGC+AGG + chr2.3:56056287-56056306 MS.gene56025:intron 30.0%
ATTCAATCTCAAGAAATCCA+TGG + chr2.3:56056544-56056563 MS.gene56025:CDS 30.0%
ATTGATATTGCTACCAGATA+GGG - chr2.3:56054207-56054226 None:intergenic 30.0%
CAAAAGTGAATGTTCAAAGA+AGG + chr2.3:56055125-56055144 MS.gene56025:CDS 30.0%
CAACAATCCTGCTTATATAA+TGG + chr2.3:56054718-56054737 MS.gene56025:CDS 30.0%
CATTATATAAGCAGGATTGT+TGG - chr2.3:56054720-56054739 None:intergenic 30.0%
CCAATAGGATACAATGTAAT+TGG + chr2.3:56055823-56055842 MS.gene56025:CDS 30.0%
CCAATTACATTGTATCCTAT+TGG - chr2.3:56055826-56055845 None:intergenic 30.0%
GAAAAAGAAGGGACTAAAAA+TGG + chr2.3:56053944-56053963 MS.gene56025:CDS 30.0%
GAATACTAATGATCTTTCGT+TGG + chr2.3:56055753-56055772 MS.gene56025:CDS 30.0%
GATACAAAATGTGGACAAAA+GGG + chr2.3:56056935-56056954 MS.gene56025:CDS 30.0%
GATTCTCAGTTTCTATATTC+TGG + chr2.3:56054512-56054531 MS.gene56025:CDS 30.0%
GGTTAAAGATCTTAGAGATA+AGG + chr2.3:56054823-56054842 MS.gene56025:CDS 30.0%
GTGAGTAATAAACAATATGG+TGG + chr2.3:56055622-56055641 MS.gene56025:CDS 30.0%
TAAAGATCTTAGAGATAAGG+TGG + chr2.3:56054826-56054845 MS.gene56025:CDS 30.0%
TAATAGGGGACAAAAGTTTA+TGG - chr2.3:56054676-56054695 None:intergenic 30.0%
TAGAAACTGAGAATCTTGAA+GGG - chr2.3:56054507-56054526 None:intergenic 30.0%
TCTAGGAAAATTATTTGTCC+TGG - chr2.3:56055512-56055531 None:intergenic 30.0%
TGAGAACATTAGAAGAATTC+TGG - chr2.3:56055270-56055289 None:intergenic 30.0%
TTAACTCAAAGATGTTTGCA+GGG + chr2.3:56056288-56056307 MS.gene56025:intron 30.0%
TTGAGATGTAGAAGTTATGT+TGG + chr2.3:56056907-56056926 MS.gene56025:CDS 30.0%
TTTAGAAACATCATTGGAAG+AGG - chr2.3:56055911-56055930 None:intergenic 30.0%
! AAAGTTGGTTGAAAAAGTTG+AGG + chr2.3:56054535-56054554 MS.gene56025:CDS 30.0%
! AAGTTGGTTGAAAAAGTTGA+GGG + chr2.3:56054536-56054555 MS.gene56025:CDS 30.0%
! AGATCAAGATATGTCGTTTA+CGG + chr2.3:56055963-56055982 MS.gene56025:CDS 30.0%
! ATGTATATGGATTTTTCCCT+CGG + chr2.3:56056754-56056773 MS.gene56025:CDS 30.0%
! GTTTCTATATTCTGGAAAGT+TGG + chr2.3:56054520-56054539 MS.gene56025:CDS 30.0%
! TCTAAAGTTAACCTCAATCT+AGG + chr2.3:56055925-56055944 MS.gene56025:CDS 30.0%
!! AAAACACTATTGCTTTTACC+TGG - chr2.3:56054043-56054062 None:intergenic 30.0%
!! CAGACCTAACTTTTTGTTTA+TGG - chr2.3:56056159-56056178 None:intergenic 30.0%
!! TTTGAACATTCACTTTTGCT+TGG - chr2.3:56055123-56055142 None:intergenic 30.0%
!!! GTTTTTTCCACTTGTTTGAT+TGG + chr2.3:56053972-56053991 MS.gene56025:CDS 30.0%
AAAACCGGGATTCTTAATAG+GGG - chr2.3:56054690-56054709 None:intergenic 35.0%
AAAGAAAAGGTCTACAGACA+AGG + chr2.3:56055531-56055550 MS.gene56025:CDS 35.0%
AAAGAAGGGACTAAAAATGG+AGG + chr2.3:56053947-56053966 MS.gene56025:CDS 35.0%
AAGAAAATCCAACCACAATG+TGG + chr2.3:56054170-56054189 MS.gene56025:CDS 35.0%
AAGGATATGAGTAGCCAATA+TGG + chr2.3:56057060-56057079 MS.gene56025:CDS 35.0%
AATCCAACCACTTTCCATAT+TGG - chr2.3:56057077-56057096 None:intergenic 35.0%
AATGTAGTTGCAAGGCTTAT+GGG + chr2.3:56054416-56054435 MS.gene56025:CDS 35.0%
ACAAAACCGGGATTCTTAAT+AGG - chr2.3:56054692-56054711 None:intergenic 35.0%
ACTATGATAAAGAAGCAGAC+AGG + chr2.3:56056646-56056665 MS.gene56025:CDS 35.0%
AGATGTAGAAGTTATGTTGG+TGG + chr2.3:56056910-56056929 MS.gene56025:CDS 35.0%
AGGGATCGTGTATCAAAAAA+TGG - chr2.3:56054488-56054507 None:intergenic 35.0%
ATAAGCCTTGCAACTACATT+AGG - chr2.3:56054416-56054435 None:intergenic 35.0%
ATATAAGCAGGATTGTTGGA+TGG - chr2.3:56054716-56054735 None:intergenic 35.0%
ATATGCAGAGTCATTGAAAC+AGG + chr2.3:56054146-56054165 MS.gene56025:intron 35.0%
ATGAAGACGAAAATGGTGTT+GGG + chr2.3:56054318-56054337 MS.gene56025:CDS 35.0%
ATTGTTGGATGGAACAAAAC+CGG - chr2.3:56054705-56054724 None:intergenic 35.0%
CAAAACCGGGATTCTTAATA+GGG - chr2.3:56054691-56054710 None:intergenic 35.0%
CAATCCTGCTTATATAATGG+AGG + chr2.3:56054721-56054740 MS.gene56025:CDS 35.0%
CATTCACTACACCATTAACA+AGG + chr2.3:56055689-56055708 MS.gene56025:CDS 35.0%
GACAATCTTTGAACAAAAGC+TGG + chr2.3:56055005-56055024 MS.gene56025:CDS 35.0%
GATTGATATTGCTACCAGAT+AGG - chr2.3:56054208-56054227 None:intergenic 35.0%
GGATACAAAATGTGGACAAA+AGG + chr2.3:56056934-56056953 MS.gene56025:CDS 35.0%
GGTGAAAAGAAAAGATTGGT+TGG + chr2.3:56056966-56056985 MS.gene56025:CDS 35.0%
TAATGTAGTTGCAAGGCTTA+TGG + chr2.3:56054415-56054434 MS.gene56025:CDS 35.0%
TAATTTCTTACGCGATTTCG+AGG - chr2.3:56053999-56054018 None:intergenic 35.0%
TCTCATCAGAATCTACTCAA+AGG + chr2.3:56054948-56054967 MS.gene56025:CDS 35.0%
TCTTTGAACAAAAGCTGGAA+TGG + chr2.3:56055010-56055029 MS.gene56025:CDS 35.0%
TGCTTGATACAGACAATACA+AGG + chr2.3:56055797-56055816 MS.gene56025:CDS 35.0%
! AATGCTGTGAAGTGTTTACA+GGG + chr2.3:56054983-56055002 MS.gene56025:CDS 35.0%
! CAATGATGATTCTGGAAGAT+TGG - chr2.3:56056031-56056050 None:intergenic 35.0%
! GGTCTAGTAATAACCTTTTG+AGG - chr2.3:56054590-56054609 None:intergenic 35.0%
! TCTGTAGACCTTTTCTTTCT+AGG - chr2.3:56055529-56055548 None:intergenic 35.0%
! TTTTTCTGAGCATTTGCCTT+AGG - chr2.3:56055226-56055245 None:intergenic 35.0%
!! AGAAGTATTGCCTCCAAAAT+CGG + chr2.3:56054628-56054647 MS.gene56025:CDS 35.0%
!! CTGTTCTAAAAGGATACCTA+AGG - chr2.3:56055857-56055876 None:intergenic 35.0%
!! GAGGTTGATGCTTATGAATT+TGG + chr2.3:56057099-56057118 MS.gene56025:CDS 35.0%
!!! CCTTTTAGAACAGAAGTTGA+GGG + chr2.3:56055864-56055883 MS.gene56025:CDS 35.0%
!!! TCCTTTTAGAACAGAAGTTG+AGG + chr2.3:56055863-56055882 MS.gene56025:CDS 35.0%
AACTCTGCATCAGATTCAGT+AGG - chr2.3:56056595-56056614 None:intergenic 40.0%
AAGTTGAGGGAATTGACAAG+TGG + chr2.3:56055877-56055896 MS.gene56025:CDS 40.0%
ACGATGAATCGAGGTTAGAA+AGG + chr2.3:56056848-56056867 MS.gene56025:CDS 40.0%
ACTGAAGATGTCGCAATAAG+AGG - chr2.3:56054869-56054888 None:intergenic 40.0%
ATCAGTACCATCTAAGCCAT+TGG + chr2.3:56055336-56055355 MS.gene56025:CDS 40.0%
ATTTGCCTTAGGTGGTTGAT+TGG - chr2.3:56055215-56055234 None:intergenic 40.0%
CAAGGTAGAAAAGTTACGAC+TGG + chr2.3:56055370-56055389 MS.gene56025:CDS 40.0%
CAGCTTCTTCAACATCAACT+AGG + chr2.3:56056623-56056642 MS.gene56025:CDS 40.0%
GAAAGGGATGAGAGATTCAA+TGG + chr2.3:56057020-56057039 MS.gene56025:CDS 40.0%
GAAATCCAATCAACCACCTA+AGG + chr2.3:56055207-56055226 MS.gene56025:CDS 40.0%
GACAATACAAGGTCTCCAAT+AGG + chr2.3:56055808-56055827 MS.gene56025:CDS 40.0%
GACAGTTTAAACAGTAGCTG+TGG + chr2.3:56055985-56056004 MS.gene56025:CDS 40.0%
GATGAAGACGAAAATGGTGT+TGG + chr2.3:56054317-56054336 MS.gene56025:CDS 40.0%
GCATCAAAGTCAGATTTACC+AGG + chr2.3:56054022-56054041 MS.gene56025:CDS 40.0%
GGAGACTTAACAGATGTTTC+CGG - chr2.3:56055040-56055059 None:intergenic 40.0%
GGGATCTTCTAGCAATTTCA+TGG + chr2.3:56054556-56054575 MS.gene56025:CDS 40.0%
GTGAATGTTCAAAGAAGGGA+AGG + chr2.3:56055130-56055149 MS.gene56025:CDS 40.0%
GTGGACAAAAGGGTTTGAAA+TGG + chr2.3:56056945-56056964 MS.gene56025:CDS 40.0%
GTTGGCAAAAGATGTGTACA+AGG + chr2.3:56056984-56057003 MS.gene56025:CDS 40.0%
TAGCCAATATGGAAAGTGGT+TGG + chr2.3:56057071-56057090 MS.gene56025:CDS 40.0%
TCAAGAACTGAGATTGGACT+TGG - chr2.3:56056351-56056370 None:intergenic 40.0%
TCTGTTACAAGTGATGACTG+TGG + chr2.3:56054380-56054399 MS.gene56025:CDS 40.0%
TCTGTTGCAATCCTAGATTG+AGG - chr2.3:56055939-56055958 None:intergenic 40.0%
TGAGTAGCCAATATGGAAAG+TGG + chr2.3:56057067-56057086 MS.gene56025:CDS 40.0%
TGATGTTGAAGAAGCTGAGT+CGG - chr2.3:56056620-56056639 None:intergenic 40.0%
TGATTGTGTGAGCGAATGTA+TGG + chr2.3:56056882-56056901 MS.gene56025:CDS 40.0%
TGGAAAGTGGTTGGATTATG+AGG + chr2.3:56057080-56057099 MS.gene56025:CDS 40.0%
TTAGATTCTTTGCCTCCTTC+CGG + chr2.3:56054440-56054459 MS.gene56025:CDS 40.0%
TTGGAAACCAATGGCTTAGA+TGG - chr2.3:56055346-56055365 None:intergenic 40.0%
TTGGTGGAGGATACAAAATG+TGG + chr2.3:56056926-56056945 MS.gene56025:CDS 40.0%
TTGTCCCCTATTAAGAATCC+CGG + chr2.3:56054683-56054702 MS.gene56025:CDS 40.0%
TTGTTGGATGGAACAAAACC+GGG - chr2.3:56054704-56054723 None:intergenic 40.0%
! AACTTTTCTACCTTGCGAGT+TGG - chr2.3:56055365-56055384 None:intergenic 40.0%
! AGTTCTTGAGCCTTCGTTTT+CGG + chr2.3:56056362-56056381 MS.gene56025:CDS 40.0%
! ATCAAAAAATGGCGTCGAGT+AGG - chr2.3:56054477-56054496 None:intergenic 40.0%
! CCCTCAACTTCTGTTCTAAA+AGG - chr2.3:56055867-56055886 None:intergenic 40.0%
! CGACATCTTCAGTAGCTTTT+AGG + chr2.3:56054876-56054895 MS.gene56025:CDS 40.0%
! GAATGCTGTGAAGTGTTTAC+AGG + chr2.3:56054982-56055001 MS.gene56025:CDS 40.0%
! TCAAAAAATGGCGTCGAGTA+GGG - chr2.3:56054476-56054495 None:intergenic 40.0%
! TCATGTCGAGATGCTCTTTT+TGG - chr2.3:56055189-56055208 None:intergenic 40.0%
! TGAAGACGAAAATGGTGTTG+GGG + chr2.3:56054319-56054338 MS.gene56025:CDS 40.0%
! TGATTCTGGAAGATTGGTCA+AGG - chr2.3:56056025-56056044 None:intergenic 40.0%
! TGGTAGATCATCGACTACAT+GGG + chr2.3:56056690-56056709 MS.gene56025:CDS 40.0%
! TGTAGAAGTTATGTTGGTGG+AGG + chr2.3:56056913-56056932 MS.gene56025:CDS 40.0%
! TTGGTAGATCATCGACTACA+TGG + chr2.3:56056689-56056708 MS.gene56025:CDS 40.0%
!! TTCAATGGTTGATGAGCTTG+TGG + chr2.3:56057035-56057054 MS.gene56025:CDS 40.0%
!!! ATTGATCTTGCCGATTTTGG+AGG - chr2.3:56054641-56054660 None:intergenic 40.0%
!!! CTTCAGTAGCTTTTAGGACT+CGG + chr2.3:56054882-56054901 MS.gene56025:CDS 40.0%
!!! GGAATTGATCTTGCCGATTT+TGG - chr2.3:56054644-56054663 None:intergenic 40.0%
!!! TTCAGTAGCTTTTAGGACTC+GGG + chr2.3:56054883-56054902 MS.gene56025:CDS 40.0%
AAAGGTCTACAGACAAGGAC+TGG + chr2.3:56055536-56055555 MS.gene56025:CDS 45.0%
AACCAGTTGGAAAGCCGAAA+GGG + chr2.3:56056811-56056830 MS.gene56025:CDS 45.0%
ACACTTCACAGCATTCGACT+CGG - chr2.3:56054978-56054997 None:intergenic 45.0%
ACCGGTGGCAGAAATTTGAT+GGG + chr2.3:56055163-56055182 MS.gene56025:CDS 45.0%
ACGACTGGAGATTCCTCTTA+TGG + chr2.3:56055385-56055404 MS.gene56025:CDS 45.0%
AGCAAAGGCTAAAGCGCATT+TGG + chr2.3:56054778-56054797 MS.gene56025:CDS 45.0%
AGTTTACAACCTCGCGAGAT+CGG - chr2.3:56056780-56056799 None:intergenic 45.0%
ATCATCGACGGTCTCACTAA+GGG + chr2.3:56054802-56054821 MS.gene56025:CDS 45.0%
ATCGAAAAAGTCAGCTGTGG+AGG + chr2.3:56055456-56055475 MS.gene56025:CDS 45.0%
ATGTTTGCAGGGTGATGAGA+TGG + chr2.3:56056299-56056318 MS.gene56025:intron 45.0%
CAGCTTTCAACCGAAAACGA+AGG - chr2.3:56056375-56056394 None:intergenic 45.0%
CAGGTCGATGAAGACGAAAA+TGG + chr2.3:56054311-56054330 MS.gene56025:intron 45.0%
CATGGAGTCAAAGCCTCAAA+AGG + chr2.3:56054574-56054593 MS.gene56025:CDS 45.0%
CCCAGGTTCAAGAATTCTTG+CGG - chr2.3:56054750-56054769 None:intergenic 45.0%
CCGCAAGAATTCTTGAACCT+GGG + chr2.3:56054747-56054766 MS.gene56025:CDS 45.0%
CTCTCATCTGTTCAACCAGT+TGG + chr2.3:56056798-56056817 MS.gene56025:CDS 45.0%
CTGGAGATTCCTCTTATGGA+CGG + chr2.3:56055389-56055408 MS.gene56025:CDS 45.0%
GAAGGCTCAAGAACTGAGAT+TGG - chr2.3:56056357-56056376 None:intergenic 45.0%
GAATCTTCTTCTGCGTGTGT+AGG - chr2.3:56055061-56055080 None:intergenic 45.0%
GAGCTCCTAATGTAGTTGCA+AGG + chr2.3:56054408-56054427 MS.gene56025:CDS 45.0%
GCAGCCTCCATTATATAAGC+AGG - chr2.3:56054728-56054747 None:intergenic 45.0%
GCGGATGTTATCAGTACAGA+AGG + chr2.3:56056411-56056430 MS.gene56025:CDS 45.0%
GGATTGCTGCTCCTTGTTAA+TGG - chr2.3:56055703-56055722 None:intergenic 45.0%
GTATTCTTTCCACCTTGTCG+AGG - chr2.3:56055739-56055758 None:intergenic 45.0%
TCGAGGTCCAATCAAACAAG+TGG - chr2.3:56053982-56054001 None:intergenic 45.0%
TGGATCGAAAAAGTCAGCTG+TGG + chr2.3:56055453-56055472 MS.gene56025:CDS 45.0%
TGTCGGCAATTGAATGACAG+TGG - chr2.3:56056327-56056346 None:intergenic 45.0%
TTAACAAGGAGCAGCAATCC+AGG + chr2.3:56055703-56055722 MS.gene56025:CDS 45.0%
TTCTGAGCATTTGCCTTAGG+TGG - chr2.3:56055223-56055242 None:intergenic 45.0%
! AAGGTGGATTCTTCGCAGAA+AGG + chr2.3:56054842-56054861 MS.gene56025:CDS 45.0%
! CATTTTCGTCTTCATCGACC+TGG - chr2.3:56054313-56054332 None:intergenic 45.0%
! CTCACTAGATTTGACTTCGC+TGG - chr2.3:56055607-56055626 None:intergenic 45.0%
! CTGAGATTGGACTTGGTTGT+CGG - chr2.3:56056344-56056363 None:intergenic 45.0%
! GGTGTTGGGGAATATGTTAG+AGG + chr2.3:56054332-56054351 MS.gene56025:CDS 45.0%
!! GGTTGATGAGCTTGTGGATA+AGG + chr2.3:56057041-56057060 MS.gene56025:CDS 45.0%
AGCGCATTTGGCATCATCGA+CGG + chr2.3:56054790-56054809 MS.gene56025:CDS 50.0%
CAAAAGCTGGAATGGAGCAC+CGG + chr2.3:56055018-56055037 MS.gene56025:CDS 50.0%
CAACCAGTTGGAAAGCCGAA+AGG + chr2.3:56056810-56056829 MS.gene56025:CDS 50.0%
CATCATCGACGGTCTCACTA+AGG + chr2.3:56054801-56054820 MS.gene56025:CDS 50.0%
CCAACCACAATGTGGCAATG+AGG + chr2.3:56054178-56054197 MS.gene56025:CDS 50.0%
CCTCATTGCCACATTGTGGT+TGG - chr2.3:56054181-56054200 None:intergenic 50.0%
CGCTCTTGAAACCTCCCTTT+CGG - chr2.3:56056828-56056847 None:intergenic 50.0%
GACCGGTGGCAGAAATTTGA+TGG + chr2.3:56055162-56055181 MS.gene56025:CDS 50.0%
GATGCCTCATTGCCACATTG+TGG - chr2.3:56054185-56054204 None:intergenic 50.0%
GCCCATCAAATTTCTGCCAC+CGG - chr2.3:56055167-56055186 None:intergenic 50.0%
GCCGCAAGAATTCTTGAACC+TGG + chr2.3:56054746-56054765 MS.gene56025:CDS 50.0%
GCTTCTATGCCGTCCATAAG+AGG - chr2.3:56055401-56055420 None:intergenic 50.0%
TCAAGAGCGACGATGAATCG+AGG + chr2.3:56056839-56056858 MS.gene56025:CDS 50.0%
TTTGCCTCCTTCCGGTTTCT+CGG + chr2.3:56054448-56054467 MS.gene56025:CDS 50.0%
! AGGGAAGGTTTGAGTTCGAC+CGG + chr2.3:56055145-56055164 MS.gene56025:CDS 50.0%
! CCTTGCGAGTTGGAAACCAA+TGG - chr2.3:56055355-56055374 None:intergenic 50.0%
!! CCATTGGTTTCCAACTCGCA+AGG + chr2.3:56055352-56055371 MS.gene56025:CDS 50.0%
CAGTTGGAAAGCCGAAAGGG+AGG + chr2.3:56056814-56056833 MS.gene56025:CDS 55.0%
CGAGTAGGGATCCGAGAAAC+CGG - chr2.3:56054462-56054481 None:intergenic 55.0%
CTCCCTTTCGGCTTTCCAAC+TGG - chr2.3:56056816-56056835 None:intergenic 55.0%
CTGTGAATCCTCGATGAGCG+CGG + chr2.3:56056392-56056411 MS.gene56025:CDS 55.0%
GATAACATCCGCGCTCATCG+AGG - chr2.3:56056403-56056422 None:intergenic 55.0%
GGACGGCATAGAAGCTCAAG+TGG + chr2.3:56055406-56055425 MS.gene56025:CDS 55.0%
GGTTCTGTGACACCTCGACA+AGG + chr2.3:56055724-56055743 MS.gene56025:CDS 55.0%
GTAATTGGCGGCGATGCCTT+AGG + chr2.3:56055838-56055857 MS.gene56025:CDS 55.0%
TAGGGATCCGAGAAACCGGA+AGG - chr2.3:56054458-56054477 None:intergenic 55.0%
TCTGTGACACCTCGACAAGG+TGG + chr2.3:56055727-56055746 MS.gene56025:CDS 55.0%
! CGCTTTAGCCTTTGCTTGCG+AGG - chr2.3:56054774-56054793 None:intergenic 55.0%
! GAAGGTTTGAGTTCGACCGG+TGG + chr2.3:56055148-56055167 MS.gene56025:CDS 55.0%
! GGCAATGAGGCATCCCTATC+TGG + chr2.3:56054191-56054210 MS.gene56025:CDS 55.0%
! TGTCGAGGTGTCACAGAACC+TGG - chr2.3:56055724-56055743 None:intergenic 55.0%
ACCTGGGTCCTCGCAAGCAA+AGG + chr2.3:56054763-56054782 MS.gene56025:CDS 60.0%
GGATCCGAGAAACCGGAAGG+AGG - chr2.3:56054455-56054474 None:intergenic 60.0%
AACCTCGCGAGATCGGCCGA+GGG - chr2.3:56056773-56056792 None:intergenic 65.0%
GCCTTTGCTTGCGAGGACCC+AGG - chr2.3:56054767-56054786 None:intergenic 65.0%
CAACCTCGCGAGATCGGCCG+AGG - chr2.3:56056774-56056793 None:intergenic 70.0%
TTCCCTCGGCCGATCTCGCG+AGG + chr2.3:56056768-56056787 MS.gene56025:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 56053935 56057191 56053935 ID=MS.gene56025
chr2.3 mRNA 56053935 56057191 56053935 ID=MS.gene56025.t1;Parent=MS.gene56025
chr2.3 exon 56053935 56054043 56053935 ID=MS.gene56025.t1.exon1;Parent=MS.gene56025.t1
chr2.3 CDS 56053935 56054043 56053935 ID=cds.MS.gene56025.t1;Parent=MS.gene56025.t1
chr2.3 exon 56054154 56054212 56054154 ID=MS.gene56025.t1.exon2;Parent=MS.gene56025.t1
chr2.3 CDS 56054154 56054212 56054154 ID=cds.MS.gene56025.t1;Parent=MS.gene56025.t1
chr2.3 exon 56054314 56056065 56054314 ID=MS.gene56025.t1.exon3;Parent=MS.gene56025.t1
chr2.3 CDS 56054314 56056065 56054314 ID=cds.MS.gene56025.t1;Parent=MS.gene56025.t1
chr2.3 exon 56056309 56056432 56056309 ID=MS.gene56025.t1.exon4;Parent=MS.gene56025.t1
chr2.3 CDS 56056309 56056432 56056309 ID=cds.MS.gene56025.t1;Parent=MS.gene56025.t1
chr2.3 exon 56056524 56057191 56056524 ID=MS.gene56025.t1.exon5;Parent=MS.gene56025.t1
chr2.3 CDS 56056524 56057191 56056524 ID=cds.MS.gene56025.t1;Parent=MS.gene56025.t1
Gene Sequence

>MS.gene56025

ATGGGAGTTGAAAAAGAAGGGACTAAAAATGGAGGAAGTTTTTTCCACTTGTTTGATTGGACCTCGAAATCGCGTAAGAAATTATTTGCATCAAAGTCAGATTTACCAGGTAAAAGCAATAGTGTTTTTACATCCCTTGTCAGTTGTCAATTGTATTTTTATTGTTCAGTTAATTTCATCTTTTGTTATTGGTAAATTTTTCTTCATTATCATATGCAGAGTCATTGAAACAGGAAAGAAAATCCAACCACAATGTGGCAATGAGGCATCCCTATCTGGTAGCAATATCAATCACTATATCTTCAATTTTATGTGTTACTTATACATAATTTTTTGTTATGAAATTAGCTAATTATTATTATATGTTTAATTGTTCCAGGTCGATGAAGACGAAAATGGTGTTGGGGAATATGTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAAGTGATGACTGTGGAACAAGAGCTCCTAATGTAGTTGCAAGGCTTATGGGATTAGATTCTTTGCCTCCTTCCGGTTTCTCGGATCCCTACTCGACGCCATTTTTTGATACACGATCCCTTCAAGATTCTCAGTTTCTATATTCTGGAAAGTTGGTTGAAAAAGTTGAGGGATCTTCTAGCAATTTCATGGAGTCAAAGCCTCAAAAGGTTATTACTAGACCAATTGAAAAGTTTCAAAGAGAAGTATTGCCTCCAAAATCGGCAAGATCAATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAATCCCGGTTTTGTTCCATCCAACAATCCTGCTTATATAATGGAGGCTGCCGCAAGAATTCTTGAACCTGGGTCCTCGCAAGCAAAGGCTAAAGCGCATTTGGCATCATCGACGGTCTCACTAAGGGTTAAAGATCTTAGAGATAAGGTGGATTCTTCGCAGAAAGGACCTCTTATTGCGACATCTTCAGTAGCTTTTAGGACTCGGGAGCTAAAAGAAAAAAGAGAAATTTCTCAAAGAAGAAGCAAGGTCTCATCAGAATCTACTCAAAGGTCAGCCGAGTCGAATGCTGTGAAGTGTTTACAGGGACAATCTTTGAACAAAAGCTGGAATGGAGCACCGGAAACATCTGTTAAGTCTCCTACACACGCAGAAGAAGATTCTTCTTTGAATAATAAAGGGAAGTCTGTTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTCGACCGGTGGCAGAAATTTGATGGGCCAAAAAGAGCATCTCGACATGAAATCCAATCAACCACCTAAGGCAAATGCTCAGAAAAATTTGCATAGGAAATCTTCTGGCCAGAATTCTTCTAATGTTCTCAGGCAGAATAATCTGAAACAGAACCATTCAATTGATAATAATGACAAATCAGTACCATCTAAGCCATTGGTTTCCAACTCGCAAGGTAGAAAAGTTACGACTGGAGATTCCTCTTATGGACGGCATAGAAGCTCAAGTGGTAAATCCATTGTAAAATCTAAAGTTGGATCGAAAAAGTCAGCTGTGGAGGTAACCGATAGCGAAAATGAAATTCTATACACCAGGACAAATAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGACTGGAACGATAGAGTTGTTGATAATTTGTTCATTGACAAAACTCAGAAGCCAGCGAAGTCAAATCTAGTGAGTAATAAACAATATGGTGGGACTGAAGAAGTGAAAAAGAAAGACATGGATGTAGTTTCTTTCACATTCACTACACCATTAACAAGGAGCAGCAATCCAGGTTCTGTGACACCTCGACAAGGTGGAAAGAATACTAATGATCTTTCGTTGGATCAACGCATTAAAAGAGTGTTGCTTGATACAGACAATACAAGGTCTCCAATAGGATACAATGTAATTGGCGGCGATGCCTTAGGTATCCTTTTAGAACAGAAGTTGAGGGAATTGACAAGTGGAGTTGAAACCTCTTCCAATGATGTTTCTAAAGTTAACCTCAATCTAGGATTGCAACAGAAGAAAGATCAAGATATGTCGTTTACGGACAGTTTAAACAGTAGCTGTGGTTCTAACATATCATCCTTGACCAATCTTCCAGAATCATCATTGAAACATAAATCATGGGTACGTCACAATCTCACCATATTTAAGTGATTATTATCTCTTAAGCATGTCAATATGAGTAGTATAATGTCATCAGTTTAATGGCTAAAACCATAAACAAAAAGTTAGGTCTGCTAAATTTATACTTTTTGATGGCATTGAAAATACCAAAAATTATTGAATAATCACTCTTTTATTAATTGGTGGCATTTTCGCTATGCTTTTCTTCCATTAAGTAAGTCATTAACTCAAAGATGTTTGCAGGGTGATGAGATGGAACCACTGTCATTCAATTGCCGACAACCAAGTCCAATCTCAGTTCTTGAGCCTTCGTTTTCGGTTGAAAGCTGTGAATCCTCGATGAGCGCGGATGTTATCAGTACAGAAGGTAAGTCATGCTTAAAAAGTTACTGTAGTTTGGTAGTTATTTAATTTAATGACACATGAGTGGTAATTTTTTTACTGTATATATTTTTCAGGAAGCAAGATGTTTTCATCTATTCAATCTCAAGAAATCCATGGATTTAATTTTTCAAGGAAGTTCTATCCTACTGAATCTGATGCAGAGTTATCCGACTCAGCTTCTTCAACATCAACTAGGACTATGATAAAGAAGCAGACAGGTACATTTTCTATGATGAAGTTTGGTAGATCATCGACTACATGGGAGCTAGACTATGTGAAAGAGATACTGTGCAATGTTGAGTTAATGTATATGGATTTTTCCCTCGGCCGATCTCGCGAGGTTGTAAACTCTCATCTGTTCAACCAGTTGGAAAGCCGAAAGGGAGGTTTCAAGAGCGACGATGAATCGAGGTTAGAAAGGAAAGTTATATTTGATTGTGTGAGCGAATGTATGGATTTGAGATGTAGAAGTTATGTTGGTGGAGGATACAAAATGTGGACAAAAGGGTTTGAAATGGTGAAAAGAAAAGATTGGTTGGCAAAAGATGTGTACAAGGAAATTTTGAGTTTGAAAGGGATGAGAGATTCAATGGTTGATGAGCTTGTGGATAAGGATATGAGTAGCCAATATGGAAAGTGGTTGGATTATGAGGTTGATGCTTATGAATTTGGAGAAGAAGTTGTTGATCAAATATTTAATTCTTTGGTTGATGATGTTGTCTATGAAATGTTGCAATTTTAA
Protein sequence

>MS.gene56025.t1

MGVEKEGTKNGGSFFHLFDWTSKSRKKLFASKSDLPESLKQERKSNHNVAMRHPYLVDEDENGVGEYVRGSCDHSYASSVTSDDCGTRAPNVVARLMGLDSLPPSGFSDPYSTPFFDTRSLQDSQFLYSGKLVEKVEGSSSNFMESKPQKVITRPIEKFQREVLPPKSARSIPVTHHKLLSPIKNPGFVPSNNPAYIMEAAARILEPGSSQAKAKAHLASSTVSLRVKDLRDKVDSSQKGPLIATSSVAFRTRELKEKREISQRRSKVSSESTQRSAESNAVKCLQGQSLNKSWNGAPETSVKSPTHAEEDSSLNNKGKSVSLAIQAKVNVQRREGLSSTGGRNLMGQKEHLDMKSNQPPKANAQKNLHRKSSGQNSSNVLRQNNLKQNHSIDNNDKSVPSKPLVSNSQGRKVTTGDSSYGRHRSSSGKSIVKSKVGSKKSAVEVTDSENEILYTRTNNFPRKKRSTDKDWNDRVVDNLFIDKTQKPAKSNLVSNKQYGGTEEVKKKDMDVVSFTFTTPLTRSSNPGSVTPRQGGKNTNDLSLDQRIKRVLLDTDNTRSPIGYNVIGGDALGILLEQKLRELTSGVETSSNDVSKVNLNLGLQQKKDQDMSFTDSLNSSCGSNISSLTNLPESSLKHKSWGDEMEPLSFNCRQPSPISVLEPSFSVESCESSMSADVISTEGSKMFSSIQSQEIHGFNFSRKFYPTESDAELSDSASSTSTRTMIKKQTGTFSMMKFGRSSTTWELDYVKEILCNVELMYMDFSLGRSREVVNSHLFNQLESRKGGFKSDDESRLERKVIFDCVSECMDLRCRSYVGGGYKMWTKGFEMVKRKDWLAKDVYKEILSLKGMRDSMVDELVDKDMSSQYGKWLDYEVDAYEFGEEVVDQIFNSLVDDVVYEMLQF