Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56255.t1 | XP_003598272.2 | 98.5 | 746 | 9 | 2 | 1 | 746 | 1 | 744 | 0.00E+00 | 1142.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56255.t1 | Q9FMA3 | 67.0 | 752 | 217 | 7 | 1 | 745 | 1 | 728 | 3.1e-200 | 699.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56255.t1 | G7J0B8 | 98.5 | 746 | 9 | 2 | 1 | 746 | 1 | 744 | 0.0e+00 | 1142.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051559 | MS.gene56255 | PPI |
| MS.gene56255 | MS.gene030781 | PPI |
| MS.gene56255 | MS.gene52445 | PPI |
| MS.gene28100 | MS.gene56255 | PPI |
| MS.gene56255 | MS.gene33044 | PPI |
| MS.gene56255 | MS.gene57427 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56255.t1 | MTR_3g009230 | 98.525 | 746 | 9 | 2 | 1 | 746 | 1 | 744 | 0.0 | 1509 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56255.t1 | AT5G56290 | 68.892 | 749 | 208 | 10 | 1 | 745 | 1 | 728 | 0.0 | 1026 |
Find 189 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGCTCCCTGTGTCTTTC+AGG | 0.148049 | 3.1:+4694879 | None:intergenic |
| GGGGCAATCGTTCCATATTT+TGG | 0.165220 | 3.1:+4690002 | None:intergenic |
| TAAGAGGTTGAGAGTAAAAT+TGG | 0.171322 | 3.1:+4696604 | None:intergenic |
| TGCCATGCATTCTCTGCTTT+TGG | 0.180441 | 3.1:+4685839 | None:intergenic |
| GCTGCTTTGAAGTATCTATT+TGG | 0.188621 | 3.1:-4690041 | MS.gene56255:CDS |
| AATGGGTGAACCTGAAATTT+AGG | 0.204896 | 3.1:+4693665 | None:intergenic |
| GGGAAGGCTCTTCGGATAAT+TGG | 0.210063 | 3.1:-4691979 | MS.gene56255:CDS |
| GAAATTTAGGGTCAGCATTC+TGG | 0.213774 | 3.1:+4693678 | None:intergenic |
| GAATGCTGACCCTAAATTTC+AGG | 0.215296 | 3.1:-4693675 | MS.gene56255:intron |
| TTACCGAATTCAGTCAAAAT+AGG | 0.221138 | 3.1:-4694794 | MS.gene56255:CDS |
| CCTGCCCCTCTTCCAGTATT+GGG | 0.251133 | 3.1:-4695229 | MS.gene56255:CDS |
| ACAGGGAGCTTGAAGATTAT+TGG | 0.274781 | 3.1:-4694869 | MS.gene56255:CDS |
| CTACAGAATCACCCAAAATA+TGG | 0.295481 | 3.1:-4690014 | MS.gene56255:CDS |
| TCCTGCCCCTCTTCCAGTAT+TGG | 0.302538 | 3.1:-4695230 | MS.gene56255:CDS |
| ACTGTAGAGGGAACTCCTTC+TGG | 0.318192 | 3.1:+4685606 | None:intergenic |
| AAGCATGAGCACCCTGTATC+AGG | 0.323226 | 3.1:+4694829 | None:intergenic |
| TGGTGAATTCTTAAATAATA+AGG | 0.327549 | 3.1:-4692650 | MS.gene56255:intron |
| GCAGATGTTCACATAGTTCT+TGG | 0.334364 | 3.1:-4688635 | MS.gene56255:CDS |
| CAGATTGGTGAAGGAGCCTT+TGG | 0.341807 | 3.1:-4692001 | MS.gene56255:CDS |
| AAGAAGGCCAAGATCTGTTT+AGG | 0.345797 | 3.1:-4691219 | MS.gene56255:CDS |
| GCCCTTTCCTAAACAGATCT+TGG | 0.365099 | 3.1:+4691212 | None:intergenic |
| GCAACAGAAAGACAACAAAA+TGG | 0.369453 | 3.1:-4692097 | MS.gene56255:CDS |
| CATTACCTGCACCTGGAGAT+TGG | 0.376459 | 3.1:-4692717 | MS.gene56255:CDS |
| AGCTTCCAACATGTCATTCC+TGG | 0.376542 | 3.1:+4685655 | None:intergenic |
| AAATTTAGGGTCAGCATTCT+GGG | 0.380235 | 3.1:+4693679 | None:intergenic |
| GCCCAAGCACGAACATAATT+AGG | 0.380296 | 3.1:+4686734 | None:intergenic |
| AATTCATTCGCCCACAGTTC+AGG | 0.386982 | 3.1:+4692121 | None:intergenic |
| TAGATTTAGGTCTGCGGGTG+TGG | 0.389130 | 3.1:-4695799 | MS.gene56255:CDS |
| TTGGAGGTGCTTCTTGCTCT+TGG | 0.391890 | 3.1:-4690435 | MS.gene56255:CDS |
| CAGATGTTCACATAGTTCTT+GGG | 0.395395 | 3.1:-4688634 | MS.gene56255:CDS |
| GCCTAATTATGTTCGTGCTT+GGG | 0.397467 | 3.1:-4686735 | MS.gene56255:CDS |
| GGAAGGCTCTTCGGATAATT+GGG | 0.397858 | 3.1:-4691978 | MS.gene56255:CDS |
| GTCAAGAAATGAGTGCAAAA+AGG | 0.399032 | 3.1:+4695279 | None:intergenic |
| GATGATGAAGCAGAAGGGTC+AGG | 0.405325 | 3.1:+4696882 | None:intergenic |
| AATGACTGGGCTGAGGAATT+CGG | 0.406128 | 3.1:-4692028 | MS.gene56255:CDS |
| CCATCAGATAAACCCAATAC+TGG | 0.406385 | 3.1:+4695217 | None:intergenic |
| TGTTCACAATACCACGCATT+TGG | 0.408423 | 3.1:+4693753 | None:intergenic |
| AGCCTAATTATGTTCGTGCT+TGG | 0.409800 | 3.1:-4686736 | MS.gene56255:CDS |
| ATGGGTGAACCTGAAATTTA+GGG | 0.419265 | 3.1:+4693666 | None:intergenic |
| TACCGAATTCAGTCAAAATA+GGG | 0.427648 | 3.1:-4694793 | MS.gene56255:CDS |
| AGCCTTTGGGGAAGGCTCTT+CGG | 0.429856 | 3.1:-4691987 | MS.gene56255:CDS |
| CAAAGTTGCATGTTAATGAC+TGG | 0.437634 | 3.1:-4692042 | MS.gene56255:CDS |
| GATAAACCCAATACTGGAAG+AGG | 0.446588 | 3.1:+4695223 | None:intergenic |
| TGCAATAGCGGCTTATCAAC+AGG | 0.447194 | 3.1:-4688477 | MS.gene56255:intron |
| TTTAGGTCTGCGGGTGTGGG+TGG | 0.448867 | 3.1:-4695795 | MS.gene56255:CDS |
| ATTACCTGCACCTGGAGATT+GGG | 0.455041 | 3.1:-4692716 | MS.gene56255:CDS |
| AGCCACAAGATTACTCTCTC+TGG | 0.457405 | 3.1:-4688544 | MS.gene56255:CDS |
| AGATTGGTGAAGGAGCCTTT+GGG | 0.458135 | 3.1:-4692000 | MS.gene56255:CDS |
| AACAACATGGTGCAAATGGT+TGG | 0.459971 | 3.1:-4694728 | MS.gene56255:CDS |
| ACGCGACCGTAGCAGCATAA+TGG | 0.461267 | 3.1:-4695179 | MS.gene56255:CDS |
| TATTCTGTTGCCCAATCTCC+AGG | 0.464052 | 3.1:+4692706 | None:intergenic |
| GCCAAGATCTGTTTAGGAAA+GGG | 0.464498 | 3.1:-4691213 | MS.gene56255:CDS |
| AGAAAATGACGATGATCAAC+AGG | 0.466750 | 3.1:-4691098 | MS.gene56255:intron |
| CCAGTATTGGGTTTATCTGA+TGG | 0.468008 | 3.1:-4695217 | MS.gene56255:CDS |
| GAACCAGGTAGCTGAGTAAG+AGG | 0.468445 | 3.1:+4696588 | None:intergenic |
| TCCGAGTAGTCTCCATCCTT+CGG | 0.469842 | 3.1:+4691132 | None:intergenic |
| GACAGCAATGTCCGTGGGAA+GGG | 0.472439 | 3.1:-4694909 | MS.gene56255:CDS |
| AGAAGCACCTCCAAGTTTGT+TGG | 0.472918 | 3.1:+4690444 | None:intergenic |
| GTCTCAAGGAAACCTGATAC+AGG | 0.475756 | 3.1:-4694841 | MS.gene56255:CDS |
| TGGGTGGGTTTGACGAAACA+TGG | 0.478911 | 3.1:-4695779 | MS.gene56255:CDS |
| CCCAATACTGGAAGAGGGGC+AGG | 0.480583 | 3.1:+4695229 | None:intergenic |
| GGATTTGGATGACCAACATA+AGG | 0.481106 | 3.1:+4691247 | None:intergenic |
| ACCCTGAAAATTCCGAAGGA+TGG | 0.481367 | 3.1:-4691144 | MS.gene56255:CDS |
| ATGTGAACATCTGCATCATC+AGG | 0.485344 | 3.1:+4688644 | None:intergenic |
| TTAGGTCTGCGGGTGTGGGT+GGG | 0.490354 | 3.1:-4695794 | MS.gene56255:CDS |
| CACCGTGATTATACTGCTGC+TGG | 0.493129 | 3.1:+4692683 | None:intergenic |
| TGTTCGTGCTTGGGCAAACA+TGG | 0.493494 | 3.1:-4686726 | MS.gene56255:CDS |
| AGTATAATCACGGTGATGCA+TGG | 0.494739 | 3.1:-4692675 | MS.gene56255:CDS |
| ACAACATGGTGCAAATGGTT+GGG | 0.498482 | 3.1:-4694727 | MS.gene56255:CDS |
| AGCAGCGGTCAGATAGTTCA+AGG | 0.500097 | 3.1:-4691297 | MS.gene56255:CDS |
| AAGAGGTTGAGAGTAAAATT+GGG | 0.500352 | 3.1:+4696605 | None:intergenic |
| TGAATTTCCTTACTTGAGCA+TGG | 0.502258 | 3.1:+4695119 | None:intergenic |
| TACTCTCTCTGGAACAAGCT+TGG | 0.503008 | 3.1:-4688533 | MS.gene56255:CDS |
| AACTCCGGCTCTATGATGGC+AGG | 0.507391 | 3.1:-4695731 | MS.gene56255:CDS |
| GAGCAACAACATGGTGCAAA+TGG | 0.509139 | 3.1:-4694732 | MS.gene56255:CDS |
| AGTCAACTCCGGCTCTATGA+TGG | 0.510156 | 3.1:-4695735 | MS.gene56255:CDS |
| ATTCTCTTGATAAGTTGTAC+AGG | 0.510273 | 3.1:+4688609 | None:intergenic |
| GCGATGCGTGATCTTATAAC+GGG | 0.510381 | 3.1:-4696918 | MS.gene56255:CDS |
| CTTTGAAGTATCTATTTGGA+TGG | 0.512648 | 3.1:-4690037 | MS.gene56255:CDS |
| GAGGAATTCGGTCAGCAGAT+TGG | 0.513609 | 3.1:-4692016 | MS.gene56255:CDS |
| GGAAGAGGGGCAGGATGAAA+AGG | 0.514676 | 3.1:+4695238 | None:intergenic |
| TGAGAATTAGCATCGAGAAA+AGG | 0.514885 | 3.1:+4696552 | None:intergenic |
| TCATCTTTGATACAAATTGA+AGG | 0.516310 | 3.1:+4692785 | None:intergenic |
| GGCGATGCGTGATCTTATAA+CGG | 0.516570 | 3.1:-4696919 | MS.gene56255:CDS |
| TCAGATTTAAATCCTTATGT+TGG | 0.516785 | 3.1:-4691259 | MS.gene56255:CDS |
| TGAACTATCTGACCGCTGCT+TGG | 0.519477 | 3.1:+4691300 | None:intergenic |
| TTGAATAGATTTAGGTCTGC+GGG | 0.519545 | 3.1:-4695804 | MS.gene56255:CDS |
| AATGAGTTAGCCCATGCATC+GGG | 0.521792 | 3.1:+4694756 | None:intergenic |
| CTCTTCGGATAATTGGGCTC+AGG | 0.525195 | 3.1:-4691972 | MS.gene56255:CDS |
| CTGCTCCACAGTAGCAATGT+TGG | 0.529086 | 3.1:+4693727 | None:intergenic |
| TTGAAGGCTTATCCTAGAGC+TGG | 0.529807 | 3.1:-4692145 | MS.gene56255:intron |
| GATATGATAATCCCGATGCA+TGG | 0.532117 | 3.1:-4694767 | MS.gene56255:CDS |
| CTTGGTGTCAGTCATACAAA+TGG | 0.532297 | 3.1:-4690417 | MS.gene56255:intron |
| TATATTATAGGAGAGGTTGA+AGG | 0.533082 | 3.1:-4696661 | MS.gene56255:intron |
| GGCTGATCCAACAAACTTGG+AGG | 0.533543 | 3.1:-4690451 | MS.gene56255:CDS |
| AGATTTAGGTCTGCGGGTGT+GGG | 0.534515 | 3.1:-4695798 | MS.gene56255:CDS |
| AGAGGCTGATCCAACAAACT+TGG | 0.535292 | 3.1:-4690454 | MS.gene56255:CDS |
| GGTGAAGGAGCCTTTGGGGA+AGG | 0.535807 | 3.1:-4691995 | MS.gene56255:CDS |
| GTGCTCATGCTTCAGACGGA+TGG | 0.538207 | 3.1:-4694818 | MS.gene56255:CDS |
| TGCCTGTTCAAAAGCTGCAA+TGG | 0.538654 | 3.1:+4688577 | None:intergenic |
| GTTGCCCAATCTCCAGGTGC+AGG | 0.539172 | 3.1:+4692712 | None:intergenic |
| GTCCCCTGCCATCATAGAGC+CGG | 0.540658 | 3.1:+4695727 | None:intergenic |
| GCCTAGCCATTATGCTGCTA+CGG | 0.544332 | 3.1:+4695173 | None:intergenic |
| CACAGTTCAGGTCCAGCTCT+AGG | 0.544577 | 3.1:+4692133 | None:intergenic |
| TTCCAGAGAGAGTAATCTTG+TGG | 0.546481 | 3.1:+4688542 | None:intergenic |
| TTCGGTCAGCAGATTGGTGA+AGG | 0.546573 | 3.1:-4692010 | MS.gene56255:CDS |
| TACAAAGAATCAGACATCTC+AGG | 0.547263 | 3.1:+4689978 | None:intergenic |
| GAGTCTGCATTACCTGCACC+TGG | 0.547559 | 3.1:-4692724 | MS.gene56255:CDS |
| ATCCAAAAGCAGAGAATGCA+TGG | 0.548861 | 3.1:-4685841 | MS.gene56255:CDS |
| CATCCAAATCCACTAAAAGA+AGG | 0.550824 | 3.1:-4691235 | MS.gene56255:CDS |
| CAACCTCTTACTCAGCTACC+TGG | 0.551358 | 3.1:-4696591 | MS.gene56255:CDS |
| AATATTTGAGAATTTCATTG+AGG | 0.551469 | 3.1:-4685817 | MS.gene56255:intron |
| AGCACAAAACTTACTGTAGA+GGG | 0.556620 | 3.1:+4685594 | None:intergenic |
| GGCCAAGATCTGTTTAGGAA+AGG | 0.559478 | 3.1:-4691214 | MS.gene56255:CDS |
| TAATTTAGACCTTCTCCAGA+AGG | 0.559522 | 3.1:-4685621 | MS.gene56255:CDS |
| GAGGGAACTCCTTCTGGAGA+AGG | 0.560805 | 3.1:+4685612 | None:intergenic |
| AGCAAGTTGCTGCCAAGCAG+CGG | 0.561910 | 3.1:-4691312 | MS.gene56255:CDS |
| ATATGATAATCCCGATGCAT+GGG | 0.561935 | 3.1:-4694766 | MS.gene56255:CDS |
| TGACAGCAATGTCCGTGGGA+AGG | 0.563726 | 3.1:-4694910 | MS.gene56255:CDS |
| GTATAATCACGGTGATGCAT+GGG | 0.565968 | 3.1:-4692674 | MS.gene56255:CDS |
| AAATGAGTTAGCCCATGCAT+CGG | 0.570079 | 3.1:+4694755 | None:intergenic |
| TCCGAAGGATGGAGACTACT+CGG | 0.572229 | 3.1:-4691133 | MS.gene56255:CDS |
| TCTTCCTCTCAAAACCCTCT+CGG | 0.575386 | 3.1:-4696861 | MS.gene56255:CDS |
| GAAGGAGTAGATGTTGATGT+AGG | 0.576029 | 3.1:+4696633 | None:intergenic |
| GAGGAAGATGATGAAGCAGA+AGG | 0.578801 | 3.1:+4696876 | None:intergenic |
| AGCGATGATGCGTGCACAAG+AGG | 0.579422 | 3.1:-4690472 | MS.gene56255:CDS |
| AAGGTAGATAGAACTCTTTG+CGG | 0.580763 | 3.1:+4695298 | None:intergenic |
| TCATTTCTTGACAGCAGTCG+CGG | 0.584376 | 3.1:-4695268 | MS.gene56255:CDS |
| ATGATGAAGCAGAAGGGTCA+GGG | 0.585681 | 3.1:+4696883 | None:intergenic |
| GTCCTATGCCTGAAAGACAC+AGG | 0.592065 | 3.1:-4694887 | MS.gene56255:CDS |
| TAGCACAAAACTTACTGTAG+AGG | 0.592602 | 3.1:+4685593 | None:intergenic |
| ACTCCGGCTCTATGATGGCA+GGG | 0.593041 | 3.1:-4695730 | MS.gene56255:CDS |
| CTTCATCAACCTACACTGGA+TGG | 0.593302 | 3.1:-4695690 | MS.gene56255:intron |
| ACAGCTTCATCAACCTACAC+TGG | 0.593849 | 3.1:-4695694 | MS.gene56255:CDS |
| AGGAAGATGATGAAGCAGAA+GGG | 0.596421 | 3.1:+4696877 | None:intergenic |
| TCCCTGTGTCTTTCAGGCAT+AGG | 0.599055 | 3.1:+4694885 | None:intergenic |
| AGATGTTCACATAGTTCTTG+GGG | 0.599275 | 3.1:-4688633 | MS.gene56255:CDS |
| TGCTTCCAGGAATGACATGT+TGG | 0.600419 | 3.1:-4685660 | MS.gene56255:CDS |
| TTGAGAATTCATCAACCCAC+TGG | 0.600819 | 3.1:+4692062 | None:intergenic |
| ATAAACCCAATACTGGAAGA+GGG | 0.600904 | 3.1:+4695224 | None:intergenic |
| TCTCTCGCTAATGCTCTCCT+CGG | 0.601744 | 3.1:-4696837 | MS.gene56255:CDS |
| CTCCGGCTCTATGATGGCAG+GGG | 0.603309 | 3.1:-4695729 | MS.gene56255:CDS |
| GTTCGTGCTTGGGCAAACAT+GGG | 0.608630 | 3.1:-4686725 | MS.gene56255:CDS |
| TAGAGCTGGACCTGAACTGT+GGG | 0.615883 | 3.1:-4692131 | MS.gene56255:CDS |
| GGGTATCAGTTATGCAAACC+AGG | 0.616162 | 3.1:-4686705 | MS.gene56255:intron |
| AGCGCGATGGAAGTCAACTC+CGG | 0.619745 | 3.1:-4695746 | MS.gene56255:CDS |
| ATCCGAAGAGCCTTCCCCAA+AGG | 0.620364 | 3.1:+4691985 | None:intergenic |
| CAGGGTGCTCATGCTTCAGA+CGG | 0.622096 | 3.1:-4694822 | MS.gene56255:CDS |
| CATGTCCAACATTGCTACTG+TGG | 0.622268 | 3.1:-4693732 | MS.gene56255:CDS |
| ATGGAGCAGCTGATGACCAG+TGG | 0.622843 | 3.1:-4692078 | MS.gene56255:CDS |
| AAAGAATCAGACATCTCAGG+TGG | 0.623681 | 3.1:+4689981 | None:intergenic |
| CAGGCATAGGACCCTTCCCA+CGG | 0.623753 | 3.1:+4694898 | None:intergenic |
| TTGAGAGTAAAATTGGGATG+CGG | 0.624124 | 3.1:+4696611 | None:intergenic |
| AATCACGGTGATGCATGGGC+TGG | 0.625438 | 3.1:-4692670 | MS.gene56255:CDS |
| TTGAAATTACCATCCAGTGT+AGG | 0.626623 | 3.1:+4695681 | None:intergenic |
| CATTAGCGAGAGAACCGAGA+GGG | 0.626860 | 3.1:+4696847 | None:intergenic |
| GCAGCGGTCAGATAGTTCAA+GGG | 0.629171 | 3.1:-4691296 | MS.gene56255:CDS |
| AACTCATTTGAGCAACAACA+TGG | 0.630190 | 3.1:-4694741 | MS.gene56255:CDS |
| TTTGAATAGATTTAGGTCTG+CGG | 0.630946 | 3.1:-4695805 | MS.gene56255:CDS |
| ACCGTAGCAGCATAATGGCT+AGG | 0.631322 | 3.1:-4695174 | MS.gene56255:CDS |
| GATATTGACAGCAATGTCCG+TGG | 0.631785 | 3.1:-4694915 | MS.gene56255:CDS |
| GATTATTGGAATGAGTCTCA+AGG | 0.633092 | 3.1:-4694855 | MS.gene56255:CDS |
| AGAATCAGACATCTCAGGTG+GGG | 0.634275 | 3.1:+4689983 | None:intergenic |
| GAGTAAAATTGGGATGCGGA+AGG | 0.637020 | 3.1:+4696615 | None:intergenic |
| GTAGGTTGATGAAGCTGTGG+TGG | 0.637473 | 3.1:+4695699 | None:intergenic |
| AAAGTTGCATGTTAATGACT+GGG | 0.637762 | 3.1:-4692041 | MS.gene56255:CDS |
| AAGAATCAGACATCTCAGGT+GGG | 0.639797 | 3.1:+4689982 | None:intergenic |
| TACCAGCAGCAGTATAATCA+CGG | 0.640293 | 3.1:-4692685 | MS.gene56255:CDS |
| GATTGGTGAAGGAGCCTTTG+GGG | 0.640785 | 3.1:-4691999 | MS.gene56255:CDS |
| GGTTTATCGAATTCAGAACC+AGG | 0.641270 | 3.1:+4696573 | None:intergenic |
| GGGTGGGTTTGACGAAACAT+GGG | 0.643024 | 3.1:-4695778 | MS.gene56255:CDS |
| CAGCGGTCAGATAGTTCAAG+GGG | 0.645860 | 3.1:-4691295 | MS.gene56255:CDS |
| ATTGCTGTCAATATCTAGAG+AGG | 0.646477 | 3.1:+4694923 | None:intergenic |
| TTTCTTGACAGCAGTCGCGG+TGG | 0.646862 | 3.1:-4695265 | MS.gene56255:CDS |
| TCAAAGTGCTGATGCAATAG+CGG | 0.646885 | 3.1:-4688489 | MS.gene56255:CDS |
| TCCTATGCCTGAAAGACACA+GGG | 0.656552 | 3.1:-4694886 | MS.gene56255:CDS |
| CTAGAGCTGGACCTGAACTG+TGG | 0.658476 | 3.1:-4692132 | MS.gene56255:CDS |
| TGGGATGAGATACAGCGCGA+TGG | 0.659918 | 3.1:-4695759 | MS.gene56255:CDS |
| GCATGTTAATGACTGGGCTG+AGG | 0.661649 | 3.1:-4692035 | MS.gene56255:CDS |
| TAAACCCAATACTGGAAGAG+GGG | 0.662913 | 3.1:+4695225 | None:intergenic |
| TTTGTATCAAAGATGAGCCG+TGG | 0.670028 | 3.1:-4692778 | MS.gene56255:CDS |
| TCTCAAGGAAACCTGATACA+GGG | 0.670691 | 3.1:-4694840 | MS.gene56255:CDS |
| TGGAGCAGCTGATGACCAGT+GGG | 0.676941 | 3.1:-4692077 | MS.gene56255:CDS |
| AGTGTAGGTTGATGAAGCTG+TGG | 0.679169 | 3.1:+4695696 | None:intergenic |
| ATATTGACAGCAATGTCCGT+GGG | 0.692432 | 3.1:-4694914 | MS.gene56255:CDS |
| TCGTATGCTTGCAAATACGT+TGG | 0.700626 | 3.1:-4693702 | MS.gene56255:CDS |
| CATCGATAATCAACTCACCA+CGG | 0.709656 | 3.1:+4692761 | None:intergenic |
| TCATCAGTAGACCAAATGCG+TGG | 0.715426 | 3.1:-4693764 | MS.gene56255:CDS |
| GCATTAGCGAGAGAACCGAG+AGG | 0.740575 | 3.1:+4696846 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 4685604 | 4696943 | 4685604 | ID=MS.gene56255 |
| chr3.1 | mRNA | 4685604 | 4696943 | 4685604 | ID=MS.gene56255.t1;Parent=MS.gene56255 |
| chr3.1 | exon | 4696818 | 4696943 | 4696818 | ID=MS.gene56255.t1.exon1;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4696818 | 4696943 | 4696818 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4696551 | 4696673 | 4696551 | ID=MS.gene56255.t1.exon2;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4696551 | 4696673 | 4696551 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4695691 | 4695838 | 4695691 | ID=MS.gene56255.t1.exon3;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4695691 | 4695838 | 4695691 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4695132 | 4695325 | 4695132 | ID=MS.gene56255.t1.exon4;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4695132 | 4695325 | 4695132 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4694710 | 4694961 | 4694710 | ID=MS.gene56255.t1.exon5;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4694710 | 4694961 | 4694710 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4693676 | 4693795 | 4693676 | ID=MS.gene56255.t1.exon6;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4693676 | 4693795 | 4693676 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4692651 | 4692818 | 4692651 | ID=MS.gene56255.t1.exon7;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4692651 | 4692818 | 4692651 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4691962 | 4692161 | 4691962 | ID=MS.gene56255.t1.exon8;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4691962 | 4692161 | 4691962 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4691099 | 4691345 | 4691099 | ID=MS.gene56255.t1.exon9;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4691099 | 4691345 | 4691099 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4690418 | 4690502 | 4690418 | ID=MS.gene56255.t1.exon10;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4690418 | 4690502 | 4690418 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4689968 | 4690077 | 4689968 | ID=MS.gene56255.t1.exon11;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4689968 | 4690077 | 4689968 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4688478 | 4688702 | 4688478 | ID=MS.gene56255.t1.exon12;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4688478 | 4688702 | 4688478 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4686706 | 4686771 | 4686706 | ID=MS.gene56255.t1.exon13;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4686706 | 4686771 | 4686706 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4685818 | 4685912 | 4685818 | ID=MS.gene56255.t1.exon14;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4685818 | 4685912 | 4685818 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| chr3.1 | exon | 4685604 | 4685685 | 4685604 | ID=MS.gene56255.t1.exon15;Parent=MS.gene56255.t1 |
| chr3.1 | CDS | 4685604 | 4685685 | 4685604 | ID=cds.MS.gene56255.t1;Parent=MS.gene56255.t1 |
| Gene Sequence |
| Protein sequence |
