Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051559.t1 | XP_003588929.2 | 98.2 | 395 | 7 | 0 | 1 | 395 | 26 | 420 | 1.30E-220 | 775.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051559.t1 | Q9SYU4 | 67.3 | 388 | 119 | 3 | 8 | 395 | 2 | 381 | 1.8e-143 | 510.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051559.t1 | G7I910 | 98.2 | 395 | 7 | 0 | 1 | 395 | 26 | 420 | 9.1e-221 | 775.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051559 | MS.gene56255 | PPI |
| MS.gene051559 | MS.gene51626 | PPI |
| MS.gene75306 | MS.gene051559 | PPI |
| MS.gene051559 | MS.gene009457 | PPI |
| MS.gene40316 | MS.gene051559 | PPI |
| MS.gene051559 | MS.gene014659 | PPI |
| MS.gene051559 | MS.gene63513 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051559.t1 | MTR_1g015390 | 98.228 | 395 | 7 | 0 | 1 | 395 | 26 | 420 | 0.0 | 809 |
| MS.gene051559.t1 | MTR_2g090325 | 48.148 | 54 | 25 | 1 | 341 | 391 | 20 | 73 | 1.42e-11 | 63.5 |
| MS.gene051559.t1 | MTR_2g090330 | 44.068 | 59 | 26 | 1 | 340 | 391 | 31 | 89 | 1.69e-11 | 62.8 |
| MS.gene051559.t1 | MTR_2g090330 | 44.068 | 59 | 26 | 1 | 340 | 391 | 34 | 92 | 1.81e-11 | 62.8 |
| MS.gene051559.t1 | MTR_8g465910 | 36.000 | 75 | 36 | 2 | 328 | 391 | 34 | 107 | 5.20e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051559.t1 | AT2G26350 | 67.268 | 388 | 119 | 3 | 8 | 395 | 2 | 381 | 0.0 | 538 |
| MS.gene051559.t1 | AT2G26350 | 67.823 | 317 | 94 | 3 | 79 | 395 | 2 | 310 | 1.96e-158 | 448 |
| MS.gene051559.t1 | AT2G26350 | 65.123 | 324 | 107 | 3 | 8 | 330 | 2 | 320 | 4.35e-150 | 427 |
| MS.gene051559.t1 | AT2G26350 | 65.123 | 324 | 107 | 3 | 8 | 330 | 2 | 320 | 4.35e-150 | 427 |
| MS.gene051559.t1 | AT2G26350 | 65.123 | 324 | 107 | 3 | 8 | 330 | 2 | 320 | 5.34e-150 | 427 |
Find 105 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTCCTTTGTCAGCTTC+TGG | 0.184069 | 1.3:-6646580 | None:intergenic |
| ACTAAACTTGAGTGTGTTAT+AGG | 0.214789 | 1.3:-6647730 | None:intergenic |
| TCTAAATGAAGAAGGTAATT+TGG | 0.233910 | 1.3:+6646552 | MS.gene051559:CDS |
| TCAGCAGCTCGCATCATTTC+CGG | 0.255932 | 1.3:-6641537 | None:intergenic |
| TTGCAGCATCATGCAACTAA+TGG | 0.269595 | 1.3:+6647467 | MS.gene051559:intron |
| AGCATAAACTCGGAGGATTT+TGG | 0.272554 | 1.3:+6643175 | MS.gene051559:CDS |
| CTGATTCGTTCTGCAATATA+TGG | 0.283807 | 1.3:-6642893 | None:intergenic |
| TATTAGGTTGCAGGACCTTA+TGG | 0.304425 | 1.3:+6642815 | MS.gene051559:intron |
| CTAAACTTGAGTGTGTTATA+GGG | 0.307358 | 1.3:-6647729 | None:intergenic |
| TGCAGCATCATGCAACTAAT+GGG | 0.331130 | 1.3:+6647468 | MS.gene051559:intron |
| TGCAATAACTCGCGAACAAA+AGG | 0.335279 | 1.3:-6643530 | None:intergenic |
| CATATATTGCAGAACGAATC+AGG | 0.335799 | 1.3:+6642894 | MS.gene051559:CDS |
| TGACTGGTTTATTAGGTTGC+AGG | 0.340656 | 1.3:+6642806 | MS.gene051559:intron |
| GTTTCCTCCGGCTGCTCAAC+CGG | 0.353165 | 1.3:+6641518 | MS.gene051559:CDS |
| TATGAGTCTGCTGAGATTTA+CGG | 0.359212 | 1.3:+6643060 | MS.gene051559:CDS |
| GGCATTCGTTATGTGTTCAT+TGG | 0.367428 | 1.3:+6643708 | MS.gene051559:CDS |
| ACGAATGCCTGCAGCACGTT+TGG | 0.370694 | 1.3:-6643694 | None:intergenic |
| GACAAAGGAAGTTGGGTCTC+TGG | 0.380016 | 1.3:+6646589 | MS.gene051559:CDS |
| CCGTGACTCCGGCGCCGTGC+TGG | 0.403519 | 1.3:-6641493 | None:intergenic |
| CTTTACTACGTTCTCACAAC+AGG | 0.407094 | 1.3:+6642118 | MS.gene051559:CDS |
| TCCGGCGCCGTGCTGGTGCT+CGG | 0.411464 | 1.3:-6641486 | None:intergenic |
| TTACCTTCTTCATTTAGAAC+AGG | 0.417974 | 1.3:-6646547 | None:intergenic |
| GTTTGGATATATGATAATAT+AGG | 0.425104 | 1.3:-6643677 | None:intergenic |
| TCTGTGCAGATATCAAATAC+TGG | 0.437156 | 1.3:+6645905 | MS.gene051559:intron |
| GACGCTTTCCGCCATCTCTT+CGG | 0.437459 | 1.3:+6641603 | MS.gene051559:CDS |
| ATCATTTCCGGTTGAGCAGC+CGG | 0.437774 | 1.3:-6641525 | None:intergenic |
| TCCATGGGGTGGGGTCATCT+TGG | 0.441439 | 1.3:+6641423 | None:intergenic |
| GATCGCTGCTTCAGTTCATC+AGG | 0.444011 | 1.3:+6645995 | MS.gene051559:CDS |
| CCCATGGGAGTAGTAGTTCT+CGG | 0.450693 | 1.3:+6643091 | MS.gene051559:CDS |
| ATTTCTCCTGCATCTGCCTC+AGG | 0.457600 | 1.3:+6643123 | MS.gene051559:CDS |
| AGAAGCTGACAAAGGAAGTT+GGG | 0.461591 | 1.3:+6646582 | MS.gene051559:CDS |
| TGGGGTCATCTTGGAAGAAA+TGG | 0.462918 | 1.3:+6641432 | MS.gene051559:CDS |
| CAGAAGCTGACAAAGGAAGT+TGG | 0.468737 | 1.3:+6646581 | MS.gene051559:CDS |
| TACAATGAACAAAGCACGCC+TGG | 0.482560 | 1.3:-6642855 | None:intergenic |
| TCCGAGCACCAGCACGGCGC+CGG | 0.484197 | 1.3:+6641485 | MS.gene051559:CDS |
| GGTTGCATTTGGTTCAGAGA+TGG | 0.485195 | 1.3:+6643196 | MS.gene051559:CDS |
| CATATATCCAAACGTGCTGC+AGG | 0.487117 | 1.3:+6643687 | MS.gene051559:CDS |
| ATCGGCGTCGGTAACGGAAT+CGG | 0.491416 | 1.3:-6641457 | None:intergenic |
| GACTGTCCTGAGGCAGATGC+AGG | 0.492991 | 1.3:-6643129 | None:intergenic |
| TACGTTCTCACAACAGGCTC+AGG | 0.499099 | 1.3:+6642124 | MS.gene051559:CDS |
| CCATGGGAGTAGTAGTTCTC+GGG | 0.500116 | 1.3:+6643092 | MS.gene051559:CDS |
| TATAACCTGCTGATGTATGG+TGG | 0.501231 | 1.3:-6646031 | None:intergenic |
| AGCTGCATCGGCGTCGGTAA+CGG | 0.502527 | 1.3:-6641463 | None:intergenic |
| GCACGCCTGGCTGGTGTAGG+AGG | 0.506200 | 1.3:-6642842 | None:intergenic |
| TTGCCTGTTCTAAATGAAGA+AGG | 0.507663 | 1.3:+6646544 | MS.gene051559:CDS |
| GTGCGGCAAAGAGGGCACTC+TGG | 0.517608 | 1.3:-6647706 | None:intergenic |
| GTCAGAAAGGATAATGCCTC+GGG | 0.523818 | 1.3:-6643037 | None:intergenic |
| CAGCAGACTCATAGTCAGAA+AGG | 0.526542 | 1.3:-6643050 | None:intergenic |
| ATGAACAAAGCACGCCTGGC+TGG | 0.528351 | 1.3:-6642851 | None:intergenic |
| GGAGTCACGGAGGTTTCCTC+CGG | 0.528902 | 1.3:+6641506 | MS.gene051559:CDS |
| CGGTGTAGGTACTAGAGTTG+CGG | 0.532284 | 1.3:+6641697 | MS.gene051559:intron |
| GCAACCCACCATACATCAGC+AGG | 0.534137 | 1.3:+6646026 | MS.gene051559:CDS |
| CTGTGCAGATATCAAATACT+GGG | 0.539646 | 1.3:+6645906 | MS.gene051559:intron |
| ATAACCTGCTGATGTATGGT+GGG | 0.540377 | 1.3:-6646030 | None:intergenic |
| GGTGTAGGAGGAAGTCCATA+AGG | 0.541970 | 1.3:-6642830 | None:intergenic |
| GGAGGAAACCTCCGTGACTC+CGG | 0.542438 | 1.3:-6641504 | None:intergenic |
| CTCTGGATCCTCATCTTCTG+AGG | 0.543345 | 1.3:+6646606 | MS.gene051559:CDS |
| CCAGCACGGCGCCGGAGTCA+CGG | 0.544488 | 1.3:+6641493 | MS.gene051559:CDS |
| GACTTCCTCCTACACCAGCC+AGG | 0.546777 | 1.3:+6642837 | MS.gene051559:CDS |
| GCTGGTGCTCGGAGCTGCAT+CGG | 0.548149 | 1.3:-6641475 | None:intergenic |
| GCTCGGAGCTGCATCGGCGT+CGG | 0.548595 | 1.3:-6641469 | None:intergenic |
| CTTTGTGTAATAGCTGCTGA+AGG | 0.552377 | 1.3:+6645948 | MS.gene051559:CDS |
| AAAGAGAGATACCGAAGAGA+TGG | 0.552475 | 1.3:-6641614 | None:intergenic |
| CCCGAGAACTACTACTCCCA+TGG | 0.556299 | 1.3:-6643092 | None:intergenic |
| GGCCACAGGAAGTAGCTGTT+GGG | 0.561730 | 1.3:-6647529 | None:intergenic |
| GCAATAACTCGCGAACAAAA+GGG | 0.562909 | 1.3:-6643529 | None:intergenic |
| TGGCCACAGGAAGTAGCTGT+TGG | 0.563044 | 1.3:-6647530 | None:intergenic |
| AAAGCACGCCTGGCTGGTGT+AGG | 0.564320 | 1.3:-6642845 | None:intergenic |
| ATGGCGGAAAGCGTCACGAC+AGG | 0.565466 | 1.3:-6641595 | None:intergenic |
| TTATAGGGGTGCGGCAAAGA+GGG | 0.566042 | 1.3:-6647714 | None:intergenic |
| TCCAAGATGACCCCACCCCA+TGG | 0.568967 | 1.3:-6641424 | None:intergenic |
| AGTCAGAAAGGATAATGCCT+CGG | 0.572669 | 1.3:-6643038 | None:intergenic |
| TGCAGCTCCGAGCACCAGCA+CGG | 0.576609 | 1.3:+6641479 | MS.gene051559:CDS |
| TTGAGTGTGTTATAGGGGTG+CGG | 0.582869 | 1.3:-6647723 | None:intergenic |
| TTGGGTGTTGACGATTACTC+AGG | 0.582995 | 1.3:-6647511 | None:intergenic |
| GTTATAGGGGTGCGGCAAAG+AGG | 0.589231 | 1.3:-6647715 | None:intergenic |
| ACAGGCTTCGTAAACAAAAG+AGG | 0.589901 | 1.3:-6641577 | None:intergenic |
| TAAACTTGAGTGTGTTATAG+GGG | 0.592716 | 1.3:-6647728 | None:intergenic |
| GACAATACCAGCAAAATACA+TGG | 0.598702 | 1.3:-6647550 | None:intergenic |
| TGATGTATGGTGGGTTGCAA+AGG | 0.599675 | 1.3:-6646021 | None:intergenic |
| TTTGGTTCAGAGATGGCCTA+CGG | 0.600488 | 1.3:+6643203 | MS.gene051559:CDS |
| CCGAGAACTACTACTCCCAT+GGG | 0.600505 | 1.3:-6643091 | None:intergenic |
| GGCTCAGGACAACAGACACT+TGG | 0.601616 | 1.3:+6642139 | MS.gene051559:CDS |
| TAATTGAACCTCAGAAGATG+AGG | 0.609240 | 1.3:-6646614 | None:intergenic |
| CCAGCAAAATACATGGCCAC+AGG | 0.617665 | 1.3:-6647543 | None:intergenic |
| CTTCAAAATAAAACAACATG+AGG | 0.619531 | 1.3:-6643571 | None:intergenic |
| ATTTACGGTGAAAATGCCCA+TGG | 0.620174 | 1.3:+6643075 | MS.gene051559:CDS |
| GAGAGATACCGAAGAGATGG+CGG | 0.627069 | 1.3:-6641611 | None:intergenic |
| CACCCAACAGCTACTTCCTG+TGG | 0.636061 | 1.3:+6647527 | MS.gene051559:CDS |
| GGAATACTGTGATATCACTC+AGG | 0.645012 | 1.3:+6642165 | MS.gene051559:CDS |
| AGTTCTAGAATTGCTTCCCG+AGG | 0.650200 | 1.3:+6643021 | MS.gene051559:intron |
| GCAGCATCATGCAACTAATG+GGG | 0.650993 | 1.3:+6647469 | MS.gene051559:intron |
| AAGCATCAAATCAAAGACCC+AGG | 0.652810 | 1.3:+6643733 | MS.gene051559:CDS |
| GCATCTCCAGAAGCTGACAA+AGG | 0.655470 | 1.3:+6646574 | MS.gene051559:CDS |
| GTAGGAACTGTATCACAGAA+TGG | 0.657715 | 1.3:+6647671 | MS.gene051559:intron |
| TGTAGGTACTAGAGTTGCGG+TGG | 0.658050 | 1.3:+6641700 | MS.gene051559:intron |
| ACGATGTTGAAGCATAAACT+CGG | 0.664346 | 1.3:+6643165 | MS.gene051559:CDS |
| TTTGTGTAATAGCTGCTGAA+GGG | 0.673194 | 1.3:+6645949 | MS.gene051559:CDS |
| ATTTCCGGTTGAGCAGCCGG+AGG | 0.675055 | 1.3:-6641522 | None:intergenic |
| TTTACGGTGAAAATGCCCAT+GGG | 0.696988 | 1.3:+6643076 | MS.gene051559:CDS |
| AGTTGATGTAGACTGTCCTG+AGG | 0.710443 | 1.3:-6643139 | None:intergenic |
| AGGACAACAGACACTTGGTG+AGG | 0.712504 | 1.3:+6642144 | MS.gene051559:CDS |
| TGCGGTGGCTTATCAAAACG+AGG | 0.712918 | 1.3:+6641715 | MS.gene051559:CDS |
| ATGTTGAAGCATAAACTCGG+AGG | 0.744627 | 1.3:+6643168 | MS.gene051559:CDS |
| GCACGGCGCCGGAGTCACGG+AGG | 0.752678 | 1.3:+6641496 | MS.gene051559:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAATAACAGTATA+TGG | - | chr1.3:6643327-6643346 | None:intergenic | 10.0% |
| !! | TTAAAGTTTAACTATTAAAA+AGG | + | chr1.3:6645591-6645610 | MS.gene051559:intron | 10.0% |
| !!! | AATATTTTTAAAAAGTATGA+TGG | + | chr1.3:6643779-6643798 | MS.gene051559:intron | 10.0% |
| !!! | ATATTTTTAAAAAGTATGAT+GGG | + | chr1.3:6643780-6643799 | MS.gene051559:intron | 10.0% |
| !!! | CAAATTAAAATCAATTTTAA+AGG | + | chr1.3:6641991-6642010 | MS.gene051559:intron | 10.0% |
| !!! | TTTTATTTTTGTCAATTATA+TGG | + | chr1.3:6643337-6643356 | MS.gene051559:intron | 10.0% |
| !! | AAGCAAAATTAATAAAATAG+AGG | + | chr1.3:6644027-6644046 | MS.gene051559:intron | 15.0% |
| !! | ATAAAAAGAAAACATCATTA+TGG | - | chr1.3:6645741-6645760 | None:intergenic | 15.0% |
| !! | TTATTCATGATAGAATATAA+TGG | + | chr1.3:6645643-6645662 | MS.gene051559:intron | 15.0% |
| !! | TTTAACTATTAAAAAGGATT+TGG | + | chr1.3:6645597-6645616 | MS.gene051559:intron | 15.0% |
| !!! | AATTATAATTTGTATGTTTC+TGG | + | chr1.3:6647137-6647156 | MS.gene051559:intron | 15.0% |
| !!! | ATTAAATGATGGAAAATAAT+GGG | + | chr1.3:6643984-6644003 | MS.gene051559:intron | 15.0% |
| !!! | ATTTTGTGATATAAAATTAC+CGG | + | chr1.3:6644061-6644080 | MS.gene051559:intron | 15.0% |
| !!! | GTTCTAATATATTGTTTTAT+TGG | + | chr1.3:6642263-6642282 | MS.gene051559:intron | 15.0% |
| !!! | GTTGTAATTTTAAATGATAT+TGG | + | chr1.3:6642346-6642365 | MS.gene051559:intron | 15.0% |
| !!! | TATTAAATGATGGAAAATAA+TGG | + | chr1.3:6643983-6644002 | MS.gene051559:intron | 15.0% |
| !!! | TCTTTTTGGATATAAAAATA+TGG | + | chr1.3:6646838-6646857 | MS.gene051559:intron | 15.0% |
| !!! | TTTATTTTAGATATTGCTTT+TGG | - | chr1.3:6644409-6644428 | None:intergenic | 15.0% |
| !!! | TTTTCCATCATTTAATATAA+AGG | - | chr1.3:6643980-6643999 | None:intergenic | 15.0% |
| !! | AAATTACGAATTTCAATTTG+CGG | + | chr1.3:6641650-6641669 | MS.gene051559:intron | 20.0% |
| !! | AATGATTAATTAAAAGAGAG+AGG | - | chr1.3:6642928-6642947 | None:intergenic | 20.0% |
| !! | AATGCAAAATTATACAAGTA+TGG | + | chr1.3:6641885-6641904 | MS.gene051559:intron | 20.0% |
| !! | AATTGTTAAAAAACTCTGTA+GGG | + | chr1.3:6646363-6646382 | MS.gene051559:intron | 20.0% |
| !! | AGGAATACAAAAATAATTCA+AGG | + | chr1.3:6646944-6646963 | MS.gene051559:intron | 20.0% |
| !! | ATACCTAATAAAATGAATGT+TGG | - | chr1.3:6646976-6646995 | None:intergenic | 20.0% |
| !! | ATTCCTAATAAAATGAATGT+TGG | - | chr1.3:6646930-6646949 | None:intergenic | 20.0% |
| !! | CAACTAAAATTTGTAGTAAT+AGG | + | chr1.3:6644381-6644400 | MS.gene051559:intron | 20.0% |
| !! | CTATATTTAATCAGTTTAGT+TGG | + | chr1.3:6643451-6643470 | MS.gene051559:intron | 20.0% |
| !! | GAATCAATTATTACTTAGAA+GGG | - | chr1.3:6644474-6644493 | None:intergenic | 20.0% |
| !! | GTTTGGATATATGATAATAT+AGG | - | chr1.3:6643680-6643699 | None:intergenic | 20.0% |
| !! | TAAAAAGGATTTGGATTAAA+TGG | + | chr1.3:6645606-6645625 | MS.gene051559:intron | 20.0% |
| !! | TAAGTTAAATGTTGTAAAGA+TGG | + | chr1.3:6644175-6644194 | MS.gene051559:intron | 20.0% |
| !! | TAATTGTTAAAAAACTCTGT+AGG | + | chr1.3:6646362-6646381 | MS.gene051559:intron | 20.0% |
| !! | TAGTTTATGATAGAACATTA+TGG | + | chr1.3:6642650-6642669 | MS.gene051559:intron | 20.0% |
| !! | TATAACAGAGCAATTTAATA+GGG | - | chr1.3:6645821-6645840 | None:intergenic | 20.0% |
| !! | TGAATCAATTATTACTTAGA+AGG | - | chr1.3:6644475-6644494 | None:intergenic | 20.0% |
| !! | TGTTTAATGTTTCCTTAAAT+GGG | - | chr1.3:6644768-6644787 | None:intergenic | 20.0% |
| !!! | ATACCAAGTCTAATAATTTT+TGG | - | chr1.3:6644960-6644979 | None:intergenic | 20.0% |
| !!! | ATTGATTTTAATTTGAAGCT+AGG | - | chr1.3:6641986-6642005 | None:intergenic | 20.0% |
| !!! | GGTTTATTCTAAAAACTAAA+TGG | - | chr1.3:6646167-6646186 | None:intergenic | 20.0% |
| !!! | GTAATGTTATGTGAAATTTT+CGG | + | chr1.3:6641677-6641696 | MS.gene051559:intron | 20.0% |
| !!! | GTAATTTTAAATGATATTGG+AGG | + | chr1.3:6642349-6642368 | MS.gene051559:intron | 20.0% |
| !!! | TAAGTTGGTACAAAAAAAAA+TGG | + | chr1.3:6646418-6646437 | MS.gene051559:intron | 20.0% |
| !!! | TAATAAAATACAGCTCTAAA+GGG | - | chr1.3:6643421-6643440 | None:intergenic | 20.0% |
| !!! | TCTTTCTTAATAGTTTTTCT+AGG | - | chr1.3:6642601-6642620 | None:intergenic | 20.0% |
| ! | AAAAATTCCTTAAGTTTGAC+CGG | - | chr1.3:6644083-6644102 | None:intergenic | 25.0% |
| ! | AAAATCAAATTCACCAAATC+AGG | - | chr1.3:6642303-6642322 | None:intergenic | 25.0% |
| ! | AAACAATTAACACTAAAGCA+CGG | - | chr1.3:6642071-6642090 | None:intergenic | 25.0% |
| ! | AAATAACCAAGTGATTACAA+AGG | - | chr1.3:6643286-6643305 | None:intergenic | 25.0% |
| ! | AACAAAACACACATTCAATT+AGG | - | chr1.3:6641790-6641809 | None:intergenic | 25.0% |
| ! | AACACTTATAGTAGAAAAGA+TGG | + | chr1.3:6642465-6642484 | MS.gene051559:intron | 25.0% |
| ! | AAGTTATTATACTGATAGAG+TGG | - | chr1.3:6643388-6643407 | None:intergenic | 25.0% |
| ! | AATTACCATGATATTGATGA+TGG | - | chr1.3:6644680-6644699 | None:intergenic | 25.0% |
| ! | AATTAGGAACACATAATCAA+GGG | - | chr1.3:6641774-6641793 | None:intergenic | 25.0% |
| ! | AGACACATAAATTAAGAAAC+AGG | - | chr1.3:6646116-6646135 | None:intergenic | 25.0% |
| ! | AGATATGATAGGATTAGAAA+CGG | + | chr1.3:6642427-6642446 | MS.gene051559:intron | 25.0% |
| ! | AGTGTAATAAGATGATATGA+CGG | - | chr1.3:6647420-6647439 | None:intergenic | 25.0% |
| ! | AGTTGAATTTATTCTCCTTA+TGG | - | chr1.3:6645343-6645362 | None:intergenic | 25.0% |
| ! | ATAGCTAAACACTTTAGATT+AGG | - | chr1.3:6644887-6644906 | None:intergenic | 25.0% |
| ! | ATCATGAATGTAGACTAAAA+TGG | - | chr1.3:6645430-6645449 | None:intergenic | 25.0% |
| ! | ATTGAATGCTAGATAGAAAA+CGG | + | chr1.3:6644141-6644160 | MS.gene051559:intron | 25.0% |
| ! | CACTTAATCAACATTCAAAT+AGG | + | chr1.3:6644516-6644535 | MS.gene051559:intron | 25.0% |
| ! | CATTAGAAAATCGGTAAAAA+GGG | + | chr1.3:6647047-6647066 | MS.gene051559:intron | 25.0% |
| ! | CTATAACAGAGCAATTTAAT+AGG | - | chr1.3:6645822-6645841 | None:intergenic | 25.0% |
| ! | CTCTTAAATACAAATCCATA+AGG | + | chr1.3:6645325-6645344 | MS.gene051559:intron | 25.0% |
| ! | CTTCAAAATAAAACAACATG+AGG | - | chr1.3:6643574-6643593 | None:intergenic | 25.0% |
| ! | GGATCCTTTATATTAAATGA+TGG | + | chr1.3:6643973-6643992 | MS.gene051559:intron | 25.0% |
| ! | GTATGTGTAGGAATTTAATT+AGG | - | chr1.3:6645390-6645409 | None:intergenic | 25.0% |
| ! | GTCATTTAAGTAGAATTACA+TGG | + | chr1.3:6643826-6643845 | MS.gene051559:intron | 25.0% |
| ! | GTGTTTAATGTTTCCTTAAA+TGG | - | chr1.3:6644769-6644788 | None:intergenic | 25.0% |
| ! | TAAAAAGCCTTAAGAGAATT+AGG | + | chr1.3:6647381-6647400 | MS.gene051559:intron | 25.0% |
| ! | TAATTGAATCCAATTCTCAT+AGG | - | chr1.3:6644291-6644310 | None:intergenic | 25.0% |
| ! | TAGAACACTCATTAGAAAAT+CGG | + | chr1.3:6647038-6647057 | MS.gene051559:intron | 25.0% |
| ! | TCATTAGAAAATCGGTAAAA+AGG | + | chr1.3:6647046-6647065 | MS.gene051559:intron | 25.0% |
| ! | TCTAAATGAAGAAGGTAATT+TGG | + | chr1.3:6646552-6646571 | MS.gene051559:CDS | 25.0% |
| !! | AGATATGTTTCTTGCAATTT+TGG | + | chr1.3:6647105-6647124 | MS.gene051559:intron | 25.0% |
| !! | AGTCCAACATTCATTTTATT+AGG | + | chr1.3:6646924-6646943 | MS.gene051559:intron | 25.0% |
| !! | ATTACCATGATATTGATGAT+GGG | - | chr1.3:6644679-6644698 | None:intergenic | 25.0% |
| !! | CTTTAAACTATAGTTTTCTG+TGG | - | chr1.3:6645577-6645596 | None:intergenic | 25.0% |
| !! | GTAATAAAATACAGCTCTAA+AGG | - | chr1.3:6643422-6643441 | None:intergenic | 25.0% |
| !!! | AACTTAAGGAATTTTTTTCC+TGG | + | chr1.3:6644087-6644106 | MS.gene051559:intron | 25.0% |
| !!! | AATAAAATACAGCTCTAAAG+GGG | - | chr1.3:6643420-6643439 | None:intergenic | 25.0% |
| !!! | ATTACAATAGATTTTAGCCA+AGG | + | chr1.3:6644851-6644870 | MS.gene051559:intron | 25.0% |
| !!! | CAAGTCTAATAATTTTTGGA+CGG | - | chr1.3:6644956-6644975 | None:intergenic | 25.0% |
| !!! | CTCATGTTGTTTTATTTTGA+AGG | + | chr1.3:6643572-6643591 | MS.gene051559:CDS | 25.0% |
| !!! | GCAAGTGATTTATTTTACAT+TGG | + | chr1.3:6642239-6642258 | MS.gene051559:intron | 25.0% |
| !!! | TTACAATAGATTTTAGCCAA+GGG | + | chr1.3:6644852-6644871 | MS.gene051559:intron | 25.0% |
| !!! | TTTTTTTCTTTCTACCAAGT+GGG | - | chr1.3:6645693-6645712 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTTTCTACCAAG+TGG | - | chr1.3:6645694-6645713 | None:intergenic | 25.0% |
| AAAAAAATGGACGACTAATG+TGG | + | chr1.3:6646431-6646450 | MS.gene051559:intron | 30.0% | |
| AAAATTACCGGTCAAACTTA+AGG | + | chr1.3:6644073-6644092 | MS.gene051559:intron | 30.0% | |
| AAACTGGATTTAGCAACAAA+CGG | - | chr1.3:6643488-6643507 | None:intergenic | 30.0% | |
| AAAGTGATGACACAAAATGA+TGG | - | chr1.3:6646293-6646312 | None:intergenic | 30.0% | |
| AACATTCAAATAGGTGAAGT+TGG | + | chr1.3:6644525-6644544 | MS.gene051559:intron | 30.0% | |
| ACATGAGCAATTAACAATGA+AGG | - | chr1.3:6642200-6642219 | None:intergenic | 30.0% | |
| ACCAAGATTTAGTACATGAA+AGG | - | chr1.3:6645790-6645809 | None:intergenic | 30.0% | |
| ACCTTTCATGTACTAAATCT+TGG | + | chr1.3:6645786-6645805 | MS.gene051559:intron | 30.0% | |
| ACTAAACTTGAGTGTGTTAT+AGG | - | chr1.3:6647733-6647752 | None:intergenic | 30.0% | |
| ACTTATAGTAGAAAAGATGG+CGG | + | chr1.3:6642468-6642487 | MS.gene051559:intron | 30.0% | |
| AGTGAATTGAACTGGAATTA+AGG | - | chr1.3:6644500-6644519 | None:intergenic | 30.0% | |
| AGTTAACAATTGCCTTAACA+AGG | - | chr1.3:6644618-6644637 | None:intergenic | 30.0% | |
| AGTTCTTAACCAGATTCAAA+GGG | - | chr1.3:6644578-6644597 | None:intergenic | 30.0% | |
| ATGATGACTGATGAATCATT+TGG | - | chr1.3:6646235-6646254 | None:intergenic | 30.0% | |
| ATGTTCTATGTTTACGTTTG+AGG | - | chr1.3:6643920-6643939 | None:intergenic | 30.0% | |
| ATTACTTAGAAGGGAAACTA+AGG | - | chr1.3:6644465-6644484 | None:intergenic | 30.0% | |
| CAATTAGGAACACATAATCA+AGG | - | chr1.3:6641775-6641794 | None:intergenic | 30.0% | |
| CAATTTCAAGATCCCATTTA+AGG | + | chr1.3:6644753-6644772 | MS.gene051559:intron | 30.0% | |
| CATGATGTAGATTTATCAAG+TGG | + | chr1.3:6645444-6645463 | MS.gene051559:intron | 30.0% | |
| CGTCCAAAAATTATTAGACT+TGG | + | chr1.3:6644954-6644973 | MS.gene051559:intron | 30.0% | |
| CTAAACTTGAGTGTGTTATA+GGG | - | chr1.3:6647732-6647751 | None:intergenic | 30.0% | |
| GTAGGAATTTAATTAGGACT+TGG | - | chr1.3:6645384-6645403 | None:intergenic | 30.0% | |
| GTGTTATAAAGAAATCAGAG+TGG | - | chr1.3:6645881-6645900 | None:intergenic | 30.0% | |
| GTTGATTAAGTGAATTGAAC+TGG | - | chr1.3:6644508-6644527 | None:intergenic | 30.0% | |
| TAAAACAATCCCTTTGAATC+TGG | + | chr1.3:6644566-6644585 | MS.gene051559:intron | 30.0% | |
| TAAACACTTTAGATTAGGCT+AGG | - | chr1.3:6644882-6644901 | None:intergenic | 30.0% | |
| TAAACTTGAGTGTGTTATAG+GGG | - | chr1.3:6647731-6647750 | None:intergenic | 30.0% | |
| TAAAGATGAGAATGTTGTGT+TGG | + | chr1.3:6642382-6642401 | MS.gene051559:intron | 30.0% | |
| TAAAGATGGAAATGTTACAG+TGG | + | chr1.3:6644189-6644208 | MS.gene051559:intron | 30.0% | |
| TAGGCCTACAAAAGAAATAA+TGG | - | chr1.3:6643661-6643680 | None:intergenic | 30.0% | |
| TCAACTCACTATTCATTTGA+AGG | - | chr1.3:6641914-6641933 | None:intergenic | 30.0% | |
| TCCTCATATTTCCAAAACAT+TGG | - | chr1.3:6646818-6646837 | None:intergenic | 30.0% | |
| TGACAATCATGTATCATTGA+GGG | - | chr1.3:6646264-6646283 | None:intergenic | 30.0% | |
| TTCAATTCCTACAAAAACTG+AGG | + | chr1.3:6645276-6645295 | MS.gene051559:intron | 30.0% | |
| TTCTTTACATCACCCAAAAT+GGG | - | chr1.3:6647264-6647283 | None:intergenic | 30.0% | |
| TTTCAATTTGAACTCGAGAA+TGG | + | chr1.3:6644329-6644348 | MS.gene051559:intron | 30.0% | |
| ! | AAATAAGGAGTGAGAAGTAT+TGG | + | chr1.3:6646898-6646917 | MS.gene051559:intron | 30.0% |
| ! | ATTGGCATTTTAAACCAGAA+CGG | - | chr1.3:6646800-6646819 | None:intergenic | 30.0% |
| ! | CTCATTCTAGTTATTAGACA+TGG | + | chr1.3:6643612-6643631 | MS.gene051559:intron | 30.0% |
| ! | GAAAATTTAAGATCAGCAGT+GGG | + | chr1.3:6646736-6646755 | MS.gene051559:intron | 30.0% |
| ! | GTTTTTGTAGGAATTGAACA+AGG | - | chr1.3:6645274-6645293 | None:intergenic | 30.0% |
| ! | TCAATATCATGGTAATTTGC+AGG | + | chr1.3:6644683-6644702 | MS.gene051559:intron | 30.0% |
| ! | TGGAAATATGAGGATCTTTT+TGG | + | chr1.3:6646824-6646843 | MS.gene051559:intron | 30.0% |
| ! | TTACCTTCTTCATTTAGAAC+AGG | - | chr1.3:6646550-6646569 | None:intergenic | 30.0% |
| ! | TTTCTTAATGAAGTGCCTTT+AGG | + | chr1.3:6646862-6646881 | MS.gene051559:intron | 30.0% |
| ! | TTTTATAACCTGCTGATGTA+TGG | - | chr1.3:6646037-6646056 | None:intergenic | 30.0% |
| !! | ATGGCTTTTGTTTAGTTAGA+TGG | + | chr1.3:6643845-6643864 | MS.gene051559:intron | 30.0% |
| !! | CTTGCCATTATTTCTTTTGT+AGG | + | chr1.3:6643654-6643673 | MS.gene051559:intron | 30.0% |
| !! | GCAAAAATTGCATTTGCTAT+GGG | - | chr1.3:6645130-6645149 | None:intergenic | 30.0% |
| !! | GGTTTAAAATGCCAATGTTT+TGG | + | chr1.3:6646804-6646823 | MS.gene051559:intron | 30.0% |
| !! | TAGTTGTTGACTGGTTTATT+AGG | + | chr1.3:6642799-6642818 | MS.gene051559:intron | 30.0% |
| !! | TCAAAGGGATTGTTTTACAA+GGG | - | chr1.3:6644563-6644582 | None:intergenic | 30.0% |
| !! | TTATGTGAAATTTTCGGTGT+AGG | + | chr1.3:6641683-6641702 | MS.gene051559:intron | 30.0% |
| !! | TTCAAAGGGATTGTTTTACA+AGG | - | chr1.3:6644564-6644583 | None:intergenic | 30.0% |
| !!! | TAAGGAATTTTTTTCCTGGT+TGG | + | chr1.3:6644091-6644110 | MS.gene051559:intron | 30.0% |
| !!! | TGATTTTTTCGTACCTGATT+TGG | + | chr1.3:6642287-6642306 | MS.gene051559:intron | 30.0% |
| AAAACTCTGTAGGGTCAATA+TGG | + | chr1.3:6646372-6646391 | MS.gene051559:intron | 35.0% | |
| AAACCACTAGACAAGTAAGT+CGG | + | chr1.3:6644236-6644255 | MS.gene051559:intron | 35.0% | |
| AAACCGTGTCCTATAATACA+TGG | - | chr1.3:6646526-6646545 | None:intergenic | 35.0% | |
| AAACTAGACTTAGGTGGTTT+AGG | + | chr1.3:6642491-6642510 | MS.gene051559:intron | 35.0% | |
| AAAGCCTTAAGAGAATTAGG+TGG | + | chr1.3:6647384-6647403 | MS.gene051559:intron | 35.0% | |
| AAATAAGCTTCACAGAAAGC+TGG | + | chr1.3:6647319-6647338 | MS.gene051559:intron | 35.0% | |
| AACATAACAGACTTAGTGGT+CGG | - | chr1.3:6645222-6645241 | None:intergenic | 35.0% | |
| AACATCTGATAGTTGTTGAC+TGG | + | chr1.3:6642790-6642809 | MS.gene051559:intron | 35.0% | |
| AAGCCTTAAGAGAATTAGGT+GGG | + | chr1.3:6647385-6647404 | MS.gene051559:intron | 35.0% | |
| AAGTTTCAAAACACGATACC+TGG | - | chr1.3:6643754-6643773 | None:intergenic | 35.0% | |
| AATGGATAAGAGGTTTGAGA+CGG | - | chr1.3:6647618-6647637 | None:intergenic | 35.0% | |
| ACCACTAAGTCTGTTATGTT+GGG | + | chr1.3:6645222-6645241 | MS.gene051559:intron | 35.0% | |
| ACGATGTTGAAGCATAAACT+CGG | + | chr1.3:6643165-6643184 | MS.gene051559:CDS | 35.0% | |
| ACTCCATTGCCATGTATTAT+AGG | + | chr1.3:6646514-6646533 | MS.gene051559:intron | 35.0% | |
| AGAATGTTGTGTTGGATGTT+TGG | + | chr1.3:6642390-6642409 | MS.gene051559:intron | 35.0% | |
| AGAGTGAAACCTATGAGAAT+TGG | + | chr1.3:6644279-6644298 | MS.gene051559:intron | 35.0% | |
| AGTAAAGAGAGTAGATCAGA+TGG | + | chr1.3:6642543-6642562 | MS.gene051559:intron | 35.0% | |
| AGTGTCATACATAAGTCACT+TGG | + | chr1.3:6646714-6646733 | MS.gene051559:intron | 35.0% | |
| AGTTTCAAAACACGATACCT+GGG | - | chr1.3:6643753-6643772 | None:intergenic | 35.0% | |
| ATAATACATGGCAATGGAGT+CGG | - | chr1.3:6646514-6646533 | None:intergenic | 35.0% | |
| ATGAGCAAGTATTTGTGCTT+TGG | + | chr1.3:6647222-6647241 | MS.gene051559:intron | 35.0% | |
| ATGCAATGTGAATGGATAAG+AGG | - | chr1.3:6647628-6647647 | None:intergenic | 35.0% | |
| ATGCTAGACAAGATAGGATT+TGG | + | chr1.3:6645469-6645488 | MS.gene051559:intron | 35.0% | |
| CAATGCATGCATTAAGAGTT+AGG | + | chr1.3:6644822-6644841 | MS.gene051559:intron | 35.0% | |
| CATATATTGCAGAACGAATC+AGG | + | chr1.3:6642894-6642913 | MS.gene051559:CDS | 35.0% | |
| CATTCTCCTTTGTAATCACT+TGG | + | chr1.3:6643277-6643296 | MS.gene051559:intron | 35.0% | |
| CCTTAACAAGGATCACTTAA+GGG | - | chr1.3:6644606-6644625 | None:intergenic | 35.0% | |
| CTAGAATGAGTGTTAAGCAA+AGG | - | chr1.3:6643602-6643621 | None:intergenic | 35.0% | |
| CTATCCCATCATCAATATCA+TGG | + | chr1.3:6644672-6644691 | MS.gene051559:intron | 35.0% | |
| CTGTGCAGATATCAAATACT+GGG | + | chr1.3:6645906-6645925 | MS.gene051559:intron | 35.0% | |
| CTGTTTGATGTGATACATGT+AGG | + | chr1.3:6647653-6647672 | MS.gene051559:intron | 35.0% | |
| GAATTACTTTGTTGAGCACT+GGG | + | chr1.3:6645074-6645093 | MS.gene051559:intron | 35.0% | |
| GACAATACCAGCAAAATACA+TGG | - | chr1.3:6647553-6647572 | None:intergenic | 35.0% | |
| GACAATCATGTATCATTGAG+GGG | - | chr1.3:6646263-6646282 | None:intergenic | 35.0% | |
| GACTAGACAGTAGATATGAT+AGG | + | chr1.3:6642416-6642435 | MS.gene051559:intron | 35.0% | |
| GAGTTCTTAACCAGATTCAA+AGG | - | chr1.3:6644579-6644598 | None:intergenic | 35.0% | |
| GTGACAATCATGTATCATTG+AGG | - | chr1.3:6646265-6646284 | None:intergenic | 35.0% | |
| GTTCTTTACATCACCCAAAA+TGG | - | chr1.3:6647265-6647284 | None:intergenic | 35.0% | |
| GTTGCTTAAAGCGATAGATT+TGG | + | chr1.3:6644434-6644453 | MS.gene051559:intron | 35.0% | |
| TAATTGAACCTCAGAAGATG+AGG | - | chr1.3:6646617-6646636 | None:intergenic | 35.0% | |
| TATGAGTCTGCTGAGATTTA+CGG | + | chr1.3:6643060-6643079 | MS.gene051559:CDS | 35.0% | |
| TCTGTGCAGATATCAAATAC+TGG | + | chr1.3:6645905-6645924 | MS.gene051559:intron | 35.0% | |
| TGAATTACTTTGTTGAGCAC+TGG | + | chr1.3:6645073-6645092 | MS.gene051559:intron | 35.0% | |
| TGTCCTATAATACATGGCAA+TGG | - | chr1.3:6646520-6646539 | None:intergenic | 35.0% | |
| TGTCTATCATTCAGACTTCT+AGG | + | chr1.3:6647756-6647775 | MS.gene051559:CDS | 35.0% | |
| TGTTGAAAAGCCACATTGAT+GGG | - | chr1.3:6645152-6645171 | None:intergenic | 35.0% | |
| TTCATACTTGATTGCTTAGC+TGG | - | chr1.3:6644731-6644750 | None:intergenic | 35.0% | |
| TTCGTGCTATAAAAATGCTG+AGG | + | chr1.3:6644906-6644925 | MS.gene051559:intron | 35.0% | |
| TTGCCATGTATTATAGGACA+CGG | + | chr1.3:6646520-6646539 | MS.gene051559:intron | 35.0% | |
| TTTATGTGTCTAGTATGCTC+TGG | + | chr1.3:6646125-6646144 | MS.gene051559:intron | 35.0% | |
| TTTGTGTAATAGCTGCTGAA+GGG | + | chr1.3:6645949-6645968 | MS.gene051559:CDS | 35.0% | |
| ! | ATGCTTTTCAGAGAAGAGTT+TGG | + | chr1.3:6646314-6646333 | MS.gene051559:intron | 35.0% |
| ! | CATGTACTAAATCTTGGTGT+AGG | + | chr1.3:6645792-6645811 | MS.gene051559:intron | 35.0% |
| ! | CTGATTCGTTCTGCAATATA+TGG | - | chr1.3:6642896-6642915 | None:intergenic | 35.0% |
| ! | CTTTGTACCTCAGTTTTTGT+AGG | - | chr1.3:6645286-6645305 | None:intergenic | 35.0% |
| ! | GGAAAATTTAAGATCAGCAG+TGG | + | chr1.3:6646735-6646754 | MS.gene051559:intron | 35.0% |
| ! | GGACGCTCTTTAAAGAAATA+AGG | + | chr1.3:6646883-6646902 | MS.gene051559:intron | 35.0% |
| ! | GGCAAAAATTGCATTTGCTA+TGG | - | chr1.3:6645131-6645150 | None:intergenic | 35.0% |
| ! | TTGCCTGTTCTAAATGAAGA+AGG | + | chr1.3:6646544-6646563 | MS.gene051559:CDS | 35.0% |
| ! | TTGTGCAGACGAAACTTTTA+GGG | + | chr1.3:6642089-6642108 | MS.gene051559:intron | 35.0% |
| ! | TTTGTGCAGACGAAACTTTT+AGG | + | chr1.3:6642088-6642107 | MS.gene051559:intron | 35.0% |
| ! | TTTTGCCATTGGATGCATAA+AGG | - | chr1.3:6645179-6645198 | None:intergenic | 35.0% |
| !! | ATGACACAAAATGATGGACT+TGG | - | chr1.3:6646287-6646306 | None:intergenic | 35.0% |
| !! | ATTGATGATGGGATAGGATA+TGG | - | chr1.3:6644668-6644687 | None:intergenic | 35.0% |
| !! | CATGATATTGATGATGGGAT+AGG | - | chr1.3:6644674-6644693 | None:intergenic | 35.0% |
| !! | TGATGATGGTGTATCTTTGA+GGG | + | chr1.3:6646337-6646356 | MS.gene051559:intron | 35.0% |
| !! | TTCTTTAAAGAGCGTCCTAA+AGG | - | chr1.3:6646880-6646899 | None:intergenic | 35.0% |
| !!! | GCCAATGTTTTGGAAATATG+AGG | + | chr1.3:6646814-6646833 | MS.gene051559:intron | 35.0% |
| AAAATGGACGACTAATGTGG+CGG | + | chr1.3:6646434-6646453 | MS.gene051559:intron | 40.0% | |
| AAAGAGAGATACCGAAGAGA+TGG | - | chr1.3:6641617-6641636 | None:intergenic | 40.0% | |
| AAAGAGAGTAGATCAGATGG+AGG | + | chr1.3:6642546-6642565 | MS.gene051559:intron | 40.0% | |
| AAGAGAGTAGATCAGATGGA+GGG | + | chr1.3:6642547-6642566 | MS.gene051559:intron | 40.0% | |
| AAGCATCAAATCAAAGACCC+AGG | + | chr1.3:6643733-6643752 | MS.gene051559:CDS | 40.0% | |
| AATCAGACCACTAGAGAAAG+AGG | + | chr1.3:6642571-6642590 | MS.gene051559:intron | 40.0% | |
| AATCTCGTGTTAGGTGGTTT+AGG | + | chr1.3:6645546-6645565 | MS.gene051559:intron | 40.0% | |
| ACAAGGATCACTTAAGGGAT+CGG | - | chr1.3:6644601-6644620 | None:intergenic | 40.0% | |
| ACAGGCTTCGTAAACAAAAG+AGG | - | chr1.3:6641580-6641599 | None:intergenic | 40.0% | |
| ACCCAACATAACAGACTTAG+TGG | - | chr1.3:6645226-6645245 | None:intergenic | 40.0% | |
| ACCTACCTTTATGCATCCAA+TGG | + | chr1.3:6645171-6645190 | MS.gene051559:intron | 40.0% | |
| AGAAGCTGACAAAGGAAGTT+GGG | + | chr1.3:6646582-6646601 | MS.gene051559:CDS | 40.0% | |
| AGATGGTAGAATCTCGTGTT+AGG | + | chr1.3:6645537-6645556 | MS.gene051559:intron | 40.0% | |
| AGTCAGAAAGGATAATGCCT+CGG | - | chr1.3:6643041-6643060 | None:intergenic | 40.0% | |
| AGTGGATGAGTGGTATAAGT+TGG | + | chr1.3:6644207-6644226 | MS.gene051559:intron | 40.0% | |
| ATAACCTGCTGATGTATGGT+GGG | - | chr1.3:6646033-6646052 | None:intergenic | 40.0% | |
| ATCCAAGATACTTCAACCGT+GGG | - | chr1.3:6643957-6643976 | None:intergenic | 40.0% | |
| ATCTTTGAGCGTCTAAGTTG+AGG | + | chr1.3:6646464-6646483 | MS.gene051559:intron | 40.0% | |
| ATGTTGAAGCATAAACTCGG+AGG | + | chr1.3:6643168-6643187 | MS.gene051559:CDS | 40.0% | |
| ATTTACGGTGAAAATGCCCA+TGG | + | chr1.3:6643075-6643094 | MS.gene051559:CDS | 40.0% | |
| CAGACAAGATGCAATGTGAA+TGG | - | chr1.3:6647636-6647655 | None:intergenic | 40.0% | |
| CAGGGTTAGAACTAAGCATT+TGG | - | chr1.3:6645028-6645047 | None:intergenic | 40.0% | |
| CATACAAGTTACAGACACGA+GGG | - | chr1.3:6647193-6647212 | None:intergenic | 40.0% | |
| CCCTTAAGTGATCCTTGTTA+AGG | + | chr1.3:6644603-6644622 | MS.gene051559:intron | 40.0% | |
| CTTTACTACGTTCTCACAAC+AGG | + | chr1.3:6642118-6642137 | MS.gene051559:CDS | 40.0% | |
| CTTTGTGTAATAGCTGCTGA+AGG | + | chr1.3:6645948-6645967 | MS.gene051559:CDS | 40.0% | |
| GAAATGTTACAGTGGATGAG+TGG | + | chr1.3:6644197-6644216 | MS.gene051559:intron | 40.0% | |
| GAATGTCTTGTATACCAACC+AGG | - | chr1.3:6644108-6644127 | None:intergenic | 40.0% | |
| GACCACTAAGTCTGTTATGT+TGG | + | chr1.3:6645221-6645240 | MS.gene051559:intron | 40.0% | |
| GCAATAACTCGCGAACAAAA+GGG | - | chr1.3:6643532-6643551 | None:intergenic | 40.0% | |
| GCACAAATACTTGCTCATAC+AGG | - | chr1.3:6647220-6647239 | None:intergenic | 40.0% | |
| GCCTTAACAAGGATCACTTA+AGG | - | chr1.3:6644607-6644626 | None:intergenic | 40.0% | |
| GGAATACTGTGATATCACTC+AGG | + | chr1.3:6642165-6642184 | MS.gene051559:CDS | 40.0% | |
| GGCATTCGTTATGTGTTCAT+TGG | + | chr1.3:6643708-6643727 | MS.gene051559:CDS | 40.0% | |
| GTAGGAACTGTATCACAGAA+TGG | + | chr1.3:6647671-6647690 | MS.gene051559:intron | 40.0% | |
| GTGTTGAAAAGCCACATTGA+TGG | - | chr1.3:6645153-6645172 | None:intergenic | 40.0% | |
| GTTGAATGAGAAACATCAGC+AGG | - | chr1.3:6643238-6643257 | None:intergenic | 40.0% | |
| TAATACATGGCAATGGAGTC+GGG | - | chr1.3:6646513-6646532 | None:intergenic | 40.0% | |
| TATAACCTGCTGATGTATGG+TGG | - | chr1.3:6646034-6646053 | None:intergenic | 40.0% | |
| TGCAATAACTCGCGAACAAA+AGG | - | chr1.3:6643533-6643552 | None:intergenic | 40.0% | |
| TGCAGCATCATGCAACTAAT+GGG | + | chr1.3:6647468-6647487 | MS.gene051559:intron | 40.0% | |
| TGTTGTGTTGGATGTTTGGT+AGG | + | chr1.3:6642394-6642413 | MS.gene051559:intron | 40.0% | |
| TTACATCACCCAAAATGGGA+GGG | - | chr1.3:6647260-6647279 | None:intergenic | 40.0% | |
| TTCTACCATCTACTCACAAC+TGG | - | chr1.3:6645528-6645547 | None:intergenic | 40.0% | |
| TTGCAGCATCATGCAACTAA+TGG | + | chr1.3:6647467-6647486 | MS.gene051559:intron | 40.0% | |
| TTTACATCACCCAAAATGGG+AGG | - | chr1.3:6647261-6647280 | None:intergenic | 40.0% | |
| TTTACGGTGAAAATGCCCAT+GGG | + | chr1.3:6643076-6643095 | MS.gene051559:CDS | 40.0% | |
| TTTGTGTAGTCAATCCCACT+TGG | + | chr1.3:6645676-6645695 | MS.gene051559:intron | 40.0% | |
| ! | AGCATAAACTCGGAGGATTT+TGG | + | chr1.3:6643175-6643194 | MS.gene051559:CDS | 40.0% |
| ! | CAATCTTTGAGGGACTAAGT+TGG | + | chr1.3:6646403-6646422 | MS.gene051559:intron | 40.0% |
| ! | CTCGTGTCTGTAACTTGTAT+GGG | + | chr1.3:6647192-6647211 | MS.gene051559:intron | 40.0% |
| ! | GCAATTTTTGCCCATCAATG+TGG | + | chr1.3:6645139-6645158 | MS.gene051559:intron | 40.0% |
| ! | GTATACAGGGATTTTGCCAT+TGG | - | chr1.3:6645190-6645209 | None:intergenic | 40.0% |
| ! | TAGATGGAGAAGAAAGCATG+TGG | + | chr1.3:6643861-6643880 | MS.gene051559:intron | 40.0% |
| ! | TATTAGGTTGCAGGACCTTA+TGG | + | chr1.3:6642815-6642834 | MS.gene051559:intron | 40.0% |
| ! | TCTTTGAGCGTCTAAGTTGA+GGG | + | chr1.3:6646465-6646484 | MS.gene051559:intron | 40.0% |
| ! | TTTGCTGTGAGTGTATGTGT+AGG | - | chr1.3:6645402-6645421 | None:intergenic | 40.0% |
| !! | AAGATGATATGACGGATGCT+TGG | - | chr1.3:6647412-6647431 | None:intergenic | 40.0% |
| !! | AATTTTTGGACGGTCTTTGC+AGG | - | chr1.3:6644946-6644965 | None:intergenic | 40.0% |
| !! | AGAGAAGAGTTTGGTGATGA+TGG | + | chr1.3:6646323-6646342 | MS.gene051559:intron | 40.0% |
| !! | ATTTTTGGACGGTCTTTGCA+GGG | - | chr1.3:6644945-6644964 | None:intergenic | 40.0% |
| !! | CAAATGCTTAGTTCTAACCC+TGG | + | chr1.3:6645026-6645045 | MS.gene051559:intron | 40.0% |
| !! | GTGATGATGGTGTATCTTTG+AGG | + | chr1.3:6646336-6646355 | MS.gene051559:intron | 40.0% |
| !! | TGACTGGTTTATTAGGTTGC+AGG | + | chr1.3:6642806-6642825 | MS.gene051559:intron | 40.0% |
| AAGTCTGTTATGTTGGGTGC+TGG | + | chr1.3:6645228-6645247 | MS.gene051559:intron | 45.0% | |
| AATCCAGTCCTCCAAAGGTT+CGG | + | chr1.3:6646190-6646209 | MS.gene051559:intron | 45.0% | |
| ACTCTGTAGGGTCAATATGG+TGG | + | chr1.3:6646375-6646394 | MS.gene051559:intron | 45.0% | |
| AGGTCTTCCTCTTTCTCTAG+TGG | - | chr1.3:6642581-6642600 | None:intergenic | 45.0% | |
| ATACCATGCCACATATCCCA+CGG | + | chr1.3:6643938-6643957 | MS.gene051559:intron | 45.0% | |
| CAACTTCCTTTGTCAGCTTC+TGG | - | chr1.3:6646583-6646602 | None:intergenic | 45.0% | |
| CAAGTAAGTCGGTTGCAACA+AGG | + | chr1.3:6644247-6644266 | MS.gene051559:intron | 45.0% | |
| CACTAAAGCACGGTTACACT+TGG | - | chr1.3:6642061-6642080 | None:intergenic | 45.0% | |
| CAGAAGCTGACAAAGGAAGT+TGG | + | chr1.3:6646581-6646600 | MS.gene051559:CDS | 45.0% | |
| CAGCAGACTCATAGTCAGAA+AGG | - | chr1.3:6643053-6643072 | None:intergenic | 45.0% | |
| CATATATCCAAACGTGCTGC+AGG | + | chr1.3:6643687-6643706 | MS.gene051559:CDS | 45.0% | |
| CCATACAAGTTACAGACACG+AGG | - | chr1.3:6647194-6647213 | None:intergenic | 45.0% | |
| CTTATCCCAGTAAGTGGGAT+CGG | - | chr1.3:6642695-6642714 | None:intergenic | 45.0% | |
| GACTGAGAAAATTCCCCAGT+TGG | - | chr1.3:6643809-6643828 | None:intergenic | 45.0% | |
| GATCCAAGATACTTCAACCG+TGG | - | chr1.3:6643958-6643977 | None:intergenic | 45.0% | |
| GCAGCATCATGCAACTAATG+GGG | + | chr1.3:6647469-6647488 | MS.gene051559:intron | 45.0% | |
| GCCATTGGATGCATAAAGGT+AGG | - | chr1.3:6645175-6645194 | None:intergenic | 45.0% | |
| GGACCCACCTAATTCTCTTA+AGG | - | chr1.3:6647391-6647410 | None:intergenic | 45.0% | |
| GGTGGCACTTCAATCTTTGA+GGG | + | chr1.3:6646393-6646412 | MS.gene051559:intron | 45.0% | |
| GTCAGAAAGGATAATGCCTC+GGG | - | chr1.3:6643040-6643059 | None:intergenic | 45.0% | |
| GTGGAGGATAAGTCAAGCAA+GGG | + | chr1.3:6643880-6643899 | MS.gene051559:intron | 45.0% | |
| GTGGTCATGCTAGACAAGAT+AGG | + | chr1.3:6645463-6645482 | MS.gene051559:intron | 45.0% | |
| TACAATGAACAAAGCACGCC+TGG | - | chr1.3:6642858-6642877 | None:intergenic | 45.0% | |
| TACTTCAACCGTGGGATATG+TGG | - | chr1.3:6643949-6643968 | None:intergenic | 45.0% | |
| TAGAAACGGCAAGAGAGTTG+AGG | + | chr1.3:6642441-6642460 | MS.gene051559:intron | 45.0% | |
| TAGCACCAGTTGTGAGTAGA+TGG | + | chr1.3:6645520-6645539 | MS.gene051559:intron | 45.0% | |
| TGAGAAAATTCCCCAGTTGG+CGG | - | chr1.3:6643806-6643825 | None:intergenic | 45.0% | |
| TGGAGGATAAGTCAAGCAAG+GGG | + | chr1.3:6643881-6643900 | MS.gene051559:intron | 45.0% | |
| TGGGGTCATCTTGGAAGAAA+TGG | + | chr1.3:6641432-6641451 | MS.gene051559:CDS | 45.0% | |
| TGGTAGAATCTCGTGTTAGG+TGG | + | chr1.3:6645540-6645559 | MS.gene051559:intron | 45.0% | |
| TGGTGGCACTTCAATCTTTG+AGG | + | chr1.3:6646392-6646411 | MS.gene051559:intron | 45.0% | |
| TGTGGAGGATAAGTCAAGCA+AGG | + | chr1.3:6643879-6643898 | MS.gene051559:intron | 45.0% | |
| TTGAGTGTGTTATAGGGGTG+CGG | - | chr1.3:6647726-6647745 | None:intergenic | 45.0% | |
| ! | ACAGTTGTGTTGATCCGTTC+TGG | + | chr1.3:6646783-6646802 | MS.gene051559:intron | 45.0% |
| ! | AGTTGATGTAGACTGTCCTG+AGG | - | chr1.3:6643142-6643161 | None:intergenic | 45.0% |
| ! | ATCCCACGGTTGAAGTATCT+TGG | + | chr1.3:6643952-6643971 | MS.gene051559:intron | 45.0% |
| ! | ATGGAGAAGAAAGCATGTGG+AGG | + | chr1.3:6643864-6643883 | MS.gene051559:intron | 45.0% |
| ! | CAACCGACTTACTTGTCTAG+TGG | - | chr1.3:6644242-6644261 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCAGTAAGT+GGG | - | chr1.3:6642700-6642719 | None:intergenic | 45.0% |
| ! | CCTCGTGTCTGTAACTTGTA+TGG | + | chr1.3:6647191-6647210 | MS.gene051559:intron | 45.0% |
| ! | GGTTGCATTTGGTTCAGAGA+TGG | + | chr1.3:6643196-6643215 | MS.gene051559:CDS | 45.0% |
| ! | GTTCCAAACCCTCCCATTTT+GGG | + | chr1.3:6647249-6647268 | MS.gene051559:intron | 45.0% |
| ! | GTTTGAGACGGACAAACAAG+CGG | - | chr1.3:6647606-6647625 | None:intergenic | 45.0% |
| ! | TGTTCCAAACCCTCCCATTT+TGG | + | chr1.3:6647248-6647267 | MS.gene051559:intron | 45.0% |
| ! | TTTGAGACGGACAAACAAGC+GGG | - | chr1.3:6647605-6647624 | None:intergenic | 45.0% |
| ! | TTTGGTTCAGAGATGGCCTA+CGG | + | chr1.3:6643203-6643222 | MS.gene051559:CDS | 45.0% |
| !! | AACAAAAGGGAGCATCTGGT+GGG | - | chr1.3:6643519-6643538 | None:intergenic | 45.0% |
| !! | AGATGGCGGAAACTAGACTT+AGG | + | chr1.3:6642482-6642501 | MS.gene051559:intron | 45.0% |
| !! | AGTTCTAGAATTGCTTCCCG+AGG | + | chr1.3:6643021-6643040 | MS.gene051559:intron | 45.0% |
| !! | CAGCACTGGTAGTTACATGT+TGG | - | chr1.3:6644994-6645013 | None:intergenic | 45.0% |
| !! | TCGGTCAGCATTGGTATACA+GGG | - | chr1.3:6645203-6645222 | None:intergenic | 45.0% |
| !! | TGATGTATGGTGGGTTGCAA+AGG | - | chr1.3:6646024-6646043 | None:intergenic | 45.0% |
| !! | TTGGGTGTTGACGATTACTC+AGG | - | chr1.3:6647514-6647533 | None:intergenic | 45.0% |
| !!! | CGGAGGATTTTGGTTGCATT+TGG | + | chr1.3:6643185-6643204 | MS.gene051559:CDS | 45.0% |
| ACTTAGTGGTCGGTCAGCAT+TGG | - | chr1.3:6645212-6645231 | None:intergenic | 50.0% | |
| AGTAAGTGGGATCGGCTACA+TGG | - | chr1.3:6642687-6642706 | None:intergenic | 50.0% | |
| ATCATTTCCGGTTGAGCAGC+CGG | - | chr1.3:6641528-6641547 | None:intergenic | 50.0% | |
| ATCCAGTCCTCCAAAGGTTC+GGG | + | chr1.3:6646191-6646210 | MS.gene051559:intron | 50.0% | |
| ATGTAGCCGATCCCACTTAC+TGG | + | chr1.3:6642686-6642705 | MS.gene051559:intron | 50.0% | |
| ATTTCTCCTGCATCTGCCTC+AGG | + | chr1.3:6643123-6643142 | MS.gene051559:CDS | 50.0% | |
| CAGCAGGAGTAATGTACCGT+AGG | - | chr1.3:6643222-6643241 | None:intergenic | 50.0% | |
| CCACTTACTGGGATAAGGCT+TGG | + | chr1.3:6642698-6642717 | MS.gene051559:intron | 50.0% | |
| CCAGCAAAATACATGGCCAC+AGG | - | chr1.3:6647546-6647565 | None:intergenic | 50.0% | |
| CCATGGGAGTAGTAGTTCTC+GGG | + | chr1.3:6643092-6643111 | MS.gene051559:CDS | 50.0% | |
| CCCATGGGAGTAGTAGTTCT+CGG | + | chr1.3:6643091-6643110 | MS.gene051559:CDS | 50.0% | |
| CCGAGAACTACTACTCCCAT+GGG | - | chr1.3:6643094-6643113 | None:intergenic | 50.0% | |
| CGATCCCACTTACTGGGATA+AGG | + | chr1.3:6642693-6642712 | MS.gene051559:intron | 50.0% | |
| CGGTGTAGGTACTAGAGTTG+CGG | + | chr1.3:6641697-6641716 | MS.gene051559:intron | 50.0% | |
| CTCTGGATCCTCATCTTCTG+AGG | + | chr1.3:6646606-6646625 | MS.gene051559:CDS | 50.0% | |
| GACAAAGGAAGTTGGGTCTC+TGG | + | chr1.3:6646589-6646608 | MS.gene051559:CDS | 50.0% | |
| GAGAGATACCGAAGAGATGG+CGG | - | chr1.3:6641614-6641633 | None:intergenic | 50.0% | |
| GATCGCTGCTTCAGTTCATC+AGG | + | chr1.3:6645995-6646014 | MS.gene051559:CDS | 50.0% | |
| GATTAGGCTAGGATGACCCT+TGG | - | chr1.3:6644871-6644890 | None:intergenic | 50.0% | |
| GCATCTCCAGAAGCTGACAA+AGG | + | chr1.3:6646574-6646593 | MS.gene051559:CDS | 50.0% | |
| GCATGTCGAGAGAAGACTTG+TGG | + | chr1.3:6642513-6642532 | MS.gene051559:intron | 50.0% | |
| GGGCACAGCTCACTAATGTT+AGG | + | chr1.3:6645094-6645113 | MS.gene051559:intron | 50.0% | |
| GGTCTTTGCAGGGAAGATCA+AGG | - | chr1.3:6644935-6644954 | None:intergenic | 50.0% | |
| GGTGTAGGAGGAAGTCCATA+AGG | - | chr1.3:6642833-6642852 | None:intergenic | 50.0% | |
| TACGTTCTCACAACAGGCTC+AGG | + | chr1.3:6642124-6642143 | MS.gene051559:CDS | 50.0% | |
| TCACCCAAAATGGGAGGGTT+TGG | - | chr1.3:6647255-6647274 | None:intergenic | 50.0% | |
| TCAGCAGCTCGCATCATTTC+CGG | - | chr1.3:6641540-6641559 | None:intergenic | 50.0% | |
| TGCGGTGGCTTATCAAAACG+AGG | + | chr1.3:6641715-6641734 | MS.gene051559:CDS | 50.0% | |
| TGGCGGAAACTAGACTTAGG+TGG | + | chr1.3:6642485-6642504 | MS.gene051559:intron | 50.0% | |
| TGTAGCCGATCCCACTTACT+GGG | + | chr1.3:6642687-6642706 | MS.gene051559:intron | 50.0% | |
| TGTAGGTACTAGAGTTGCGG+TGG | + | chr1.3:6641700-6641719 | MS.gene051559:intron | 50.0% | |
| TTGAGACGGACAAACAAGCG+GGG | - | chr1.3:6647604-6647623 | None:intergenic | 50.0% | |
| ! | ACCTTTGGAGGACTGGATTG+AGG | - | chr1.3:6646189-6646208 | None:intergenic | 50.0% |
| ! | AGGACAACAGACACTTGGTG+AGG | + | chr1.3:6642144-6642163 | MS.gene051559:CDS | 50.0% |
| ! | CCAAGCCTTATCCCAGTAAG+TGG | - | chr1.3:6642701-6642720 | None:intergenic | 50.0% |
| ! | CCTGTGGCCATGTATTTTGC+TGG | + | chr1.3:6647543-6647562 | MS.gene051559:CDS | 50.0% |
| ! | CCTTTGGAGGACTGGATTGA+GGG | - | chr1.3:6646188-6646207 | None:intergenic | 50.0% |
| ! | TGTGATAACGCCCGAACCTT+TGG | - | chr1.3:6646204-6646223 | None:intergenic | 50.0% |
| ! | TTATAGGGGTGCGGCAAAGA+GGG | - | chr1.3:6647717-6647736 | None:intergenic | 50.0% |
| !! | ACAAAAGGGAGCATCTGGTG+GGG | - | chr1.3:6643518-6643537 | None:intergenic | 50.0% |
| !! | GAACAAAAGGGAGCATCTGG+TGG | - | chr1.3:6643520-6643539 | None:intergenic | 50.0% |
| !! | GTCGGTCAGCATTGGTATAC+AGG | - | chr1.3:6645204-6645223 | None:intergenic | 50.0% |
| ACGAATGCCTGCAGCACGTT+TGG | - | chr1.3:6643697-6643716 | None:intergenic | 55.0% | |
| ATGAACAAAGCACGCCTGGC+TGG | - | chr1.3:6642854-6642873 | None:intergenic | 55.0% | |
| CAACCGTGGGATATGTGGCA+TGG | - | chr1.3:6643944-6643963 | None:intergenic | 55.0% | |
| CACCCAACAGCTACTTCCTG+TGG | + | chr1.3:6647527-6647546 | MS.gene051559:CDS | 55.0% | |
| CCCGAGAACTACTACTCCCA+TGG | - | chr1.3:6643095-6643114 | None:intergenic | 55.0% | |
| CCCTCAATCCAGTCCTCCAA+AGG | + | chr1.3:6646185-6646204 | MS.gene051559:intron | 55.0% | |
| GACGCTTTCCGCCATCTCTT+CGG | + | chr1.3:6641603-6641622 | MS.gene051559:CDS | 55.0% | |
| GATAACGCCCGAACCTTTGG+AGG | - | chr1.3:6646201-6646220 | None:intergenic | 55.0% | |
| GCAACCCACCATACATCAGC+AGG | + | chr1.3:6646026-6646045 | MS.gene051559:CDS | 55.0% | |
| GGCCACAGGAAGTAGCTGTT+GGG | - | chr1.3:6647532-6647551 | None:intergenic | 55.0% | |
| GGCTCAGGACAACAGACACT+TGG | + | chr1.3:6642139-6642158 | MS.gene051559:CDS | 55.0% | |
| TGGAAGTCAGCACTCAGCAC+TGG | - | chr1.3:6645008-6645027 | None:intergenic | 55.0% | |
| TGGCCACAGGAAGTAGCTGT+TGG | - | chr1.3:6647533-6647552 | None:intergenic | 55.0% | |
| TTGTCGCACATTCAGCGCCA+GGG | - | chr1.3:6645046-6645065 | None:intergenic | 55.0% | |
| ! | CTGGTGGGGAGCATAGAAAC+TGG | - | chr1.3:6643504-6643523 | None:intergenic | 55.0% |
| ! | GTTATAGGGGTGCGGCAAAG+AGG | - | chr1.3:6647718-6647737 | None:intergenic | 55.0% |
| !! | AAGTATGATGGGCCGCCAAC+TGG | + | chr1.3:6643791-6643810 | MS.gene051559:intron | 55.0% |
| !! | AGTATGATGGGCCGCCAACT+GGG | + | chr1.3:6643792-6643811 | MS.gene051559:intron | 55.0% |
| !! | ATCGGCGTCGGTAACGGAAT+CGG | - | chr1.3:6641460-6641479 | None:intergenic | 55.0% |
| !! | CGCGAACAAAAGGGAGCATC+TGG | - | chr1.3:6643523-6643542 | None:intergenic | 55.0% |
| AAAGCACGCCTGGCTGGTGT+AGG | - | chr1.3:6642848-6642867 | None:intergenic | 60.0% | |
| ATTTCCGGTTGAGCAGCCGG+AGG | - | chr1.3:6641525-6641544 | None:intergenic | 60.0% | |
| CTTGTCGCACATTCAGCGCC+AGG | - | chr1.3:6645047-6645066 | None:intergenic | 60.0% | |
| GACTGTCCTGAGGCAGATGC+AGG | - | chr1.3:6643132-6643151 | None:intergenic | 60.0% | |
| GACTTCCTCCTACACCAGCC+AGG | + | chr1.3:6642837-6642856 | MS.gene051559:CDS | 60.0% | |
| GGAGGAAACCTCCGTGACTC+CGG | - | chr1.3:6641507-6641526 | None:intergenic | 60.0% | |
| GGAGTCACGGAGGTTTCCTC+CGG | + | chr1.3:6641506-6641525 | MS.gene051559:CDS | 60.0% | |
| GTTTCCTCCGGCTGCTCAAC+CGG | + | chr1.3:6641518-6641537 | MS.gene051559:CDS | 60.0% | |
| !! | AGCTGCATCGGCGTCGGTAA+CGG | - | chr1.3:6641466-6641485 | None:intergenic | 60.0% |
| !! | ATGGCGGAAAGCGTCACGAC+AGG | - | chr1.3:6641598-6641617 | None:intergenic | 60.0% |
| !! | GTATGATGGGCCGCCAACTG+GGG | + | chr1.3:6643793-6643812 | MS.gene051559:intron | 60.0% |
| GCTGGTGCTCGGAGCTGCAT+CGG | - | chr1.3:6641478-6641497 | None:intergenic | 65.0% | |
| TGCAGCTCCGAGCACCAGCA+CGG | + | chr1.3:6641479-6641498 | MS.gene051559:CDS | 65.0% | |
| ! | CGCCCGAACCTTTGGAGGAC+TGG | - | chr1.3:6646196-6646215 | None:intergenic | 65.0% |
| !! | GTGCGGCAAAGAGGGCACTC+TGG | - | chr1.3:6647709-6647728 | None:intergenic | 65.0% |
| GCACGCCTGGCTGGTGTAGG+AGG | - | chr1.3:6642845-6642864 | None:intergenic | 70.0% | |
| ! | GCTCGGAGCTGCATCGGCGT+CGG | - | chr1.3:6641472-6641491 | None:intergenic | 70.0% |
| TCCGAGCACCAGCACGGCGC+CGG | + | chr1.3:6641485-6641504 | MS.gene051559:CDS | 75.0% | |
| ! | CCAGCACGGCGCCGGAGTCA+CGG | + | chr1.3:6641493-6641512 | MS.gene051559:CDS | 75.0% |
| ! | TCCGGCGCCGTGCTGGTGCT+CGG | - | chr1.3:6641489-6641508 | None:intergenic | 75.0% |
| ! | CCGTGACTCCGGCGCCGTGC+TGG | - | chr1.3:6641496-6641515 | None:intergenic | 80.0% |
| !! | GCACGGCGCCGGAGTCACGG+AGG | + | chr1.3:6641496-6641515 | MS.gene051559:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 6641426 | 6647777 | 6641426 | ID=MS.gene051559 |
| chr1.3 | mRNA | 6641426 | 6647777 | 6641426 | ID=MS.gene051559.t1;Parent=MS.gene051559 |
| chr1.3 | exon | 6641426 | 6641624 | 6641426 | ID=MS.gene051559.t1.exon1;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6641426 | 6641624 | 6641426 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6641705 | 6641736 | 6641705 | ID=MS.gene051559.t1.exon2;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6641705 | 6641736 | 6641705 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6642097 | 6642186 | 6642097 | ID=MS.gene051559.t1.exon3;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6642097 | 6642186 | 6642097 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6642821 | 6642915 | 6642821 | ID=MS.gene051559.t1.exon4;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6642821 | 6642915 | 6642821 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6643023 | 6643224 | 6643023 | ID=MS.gene051559.t1.exon5;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6643023 | 6643224 | 6643023 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6643524 | 6643593 | 6643524 | ID=MS.gene051559.t1.exon6;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6643524 | 6643593 | 6643524 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6643676 | 6643754 | 6643676 | ID=MS.gene051559.t1.exon7;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6643676 | 6643754 | 6643676 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6645914 | 6646047 | 6645914 | ID=MS.gene051559.t1.exon8;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6645914 | 6646047 | 6645914 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6646536 | 6646627 | 6646536 | ID=MS.gene051559.t1.exon9;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6646536 | 6646627 | 6646536 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6647473 | 6647564 | 6647473 | ID=MS.gene051559.t1.exon10;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6647473 | 6647564 | 6647473 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| chr1.3 | exon | 6647675 | 6647777 | 6647675 | ID=MS.gene051559.t1.exon11;Parent=MS.gene051559.t1 |
| chr1.3 | CDS | 6647675 | 6647777 | 6647675 | ID=cds.MS.gene051559.t1;Parent=MS.gene051559.t1 |
| Gene Sequence |
| Protein sequence |
