Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56272.t1 | XP_024635890.1 | 96.8 | 982 | 31 | 0 | 1 | 982 | 1 | 982 | 0.00E+00 | 1817.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56272.t1 | A0A072V440 | 96.8 | 982 | 31 | 0 | 1 | 982 | 1 | 982 | 0.0e+00 | 1817.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene56272 | 0.817016 | 4.10E-52 | -1.69E-46 |
| MS.gene052367 | MS.gene56272 | 0.812474 | 4.16E-51 | -1.69E-46 |
| MS.gene053348 | MS.gene56272 | 0.804042 | 2.61E-49 | -1.69E-46 |
| MS.gene053416 | MS.gene56272 | 0.815946 | 7.12E-52 | -1.69E-46 |
| MS.gene053417 | MS.gene56272 | 0.815577 | 8.61E-52 | -1.69E-46 |
| MS.gene056526 | MS.gene56272 | 0.829946 | 3.87E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene56272 | 0.815609 | 8.47E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene56272 | 0.827527 | 1.49E-54 | -1.69E-46 |
| MS.gene060565 | MS.gene56272 | 0.829935 | 3.90E-55 | -1.69E-46 |
| MS.gene06093 | MS.gene56272 | 0.814225 | 1.72E-51 | -1.69E-46 |
| MS.gene061260 | MS.gene56272 | 0.810641 | 1.04E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56272.t1 | MTR_3g009560 | 97.454 | 982 | 25 | 0 | 1 | 982 | 1 | 982 | 0.0 | 1994 |
| MS.gene56272.t1 | MTR_8g098575 | 36.977 | 860 | 476 | 18 | 161 | 982 | 150 | 981 | 1.67e-175 | 542 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56272.t1 | AT5G56220 | 63.883 | 958 | 312 | 19 | 34 | 982 | 34 | 966 | 0.0 | 1164 |
| MS.gene56272.t1 | AT5G56220 | 63.883 | 958 | 312 | 19 | 34 | 982 | 34 | 966 | 0.0 | 1164 |
| MS.gene56272.t1 | AT4G23440 | 34.828 | 959 | 533 | 20 | 73 | 982 | 34 | 949 | 0.0 | 556 |
| MS.gene56272.t1 | AT4G23440 | 34.828 | 959 | 533 | 20 | 73 | 982 | 34 | 949 | 0.0 | 556 |
Find 212 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTTGGAGGAACTGTTTC+AGG | 0.170120 | 3.1:+4985728 | None:intergenic |
| ATGCAATCTCGGATCATTTA+TGG | 0.181943 | 3.1:-4983675 | MS.gene56272:CDS |
| TCAATCCAAGCCTCTAAATT+TGG | 0.188009 | 3.1:+4984891 | None:intergenic |
| ATTTGCATTAGTGGAGTTTC+TGG | 0.211500 | 3.1:-4984771 | MS.gene56272:CDS |
| TGGAAGAGAGAAAGAGATTA+TGG | 0.238206 | 3.1:-4985093 | MS.gene56272:CDS |
| ATTGCGCCGGCGACGGAATA+TGG | 0.246812 | 3.1:+4982633 | None:intergenic |
| CAAGATGGAGAAAGCGAATA+AGG | 0.260081 | 3.1:+4982495 | None:intergenic |
| GACATCACAGCTTCCAAGTT+TGG | 0.261069 | 3.1:+4985637 | None:intergenic |
| GCTAACAAATTTGCTGAAAC+TGG | 0.289845 | 3.1:+4983976 | None:intergenic |
| TTTAGCAAATGTTTGTGTTA+TGG | 0.291425 | 3.1:+4983759 | None:intergenic |
| TTGGAGAAAACTAAAGAAAA+AGG | 0.309696 | 3.1:-4984051 | MS.gene56272:CDS |
| AATGAATTGTTTCCTATCAT+TGG | 0.319961 | 3.1:+4984864 | None:intergenic |
| CTGAACTTATCACGAAATTT+CGG | 0.319962 | 3.1:-4984642 | MS.gene56272:CDS |
| GTCATTTGCTCGGTTGCTTT+CGG | 0.329782 | 3.1:-4985470 | MS.gene56272:CDS |
| AGGTATATAAGCTTAGAGAT+AGG | 0.341566 | 3.1:-4984927 | MS.gene56272:CDS |
| GGAAATGAGAATGAAATTCT+TGG | 0.342118 | 3.1:+4985713 | None:intergenic |
| AAAATCATTGCATCAGATAA+TGG | 0.343592 | 3.1:+4984345 | None:intergenic |
| GTAGTAATAGTACTAGTAGT+AGG | 0.346349 | 3.1:+4985881 | None:intergenic |
| AGTAGTGTGATTTGCATTAG+TGG | 0.351595 | 3.1:-4984780 | MS.gene56272:CDS |
| TGGAATTGGAAAATCTGAAT+TGG | 0.355506 | 3.1:-4984751 | MS.gene56272:CDS |
| GCTGCGCTTCTCGTGAGGTT+TGG | 0.361916 | 3.1:-4983835 | MS.gene56272:CDS |
| GTGGCTCTTGGAGATATATA+TGG | 0.362538 | 3.1:+4985914 | None:intergenic |
| CATTCTCATTTCCAGTTCCT+AGG | 0.365652 | 3.1:-4985703 | MS.gene56272:CDS |
| ATTAGTGGAGTTTCTGGAAT+TGG | 0.377363 | 3.1:-4984765 | MS.gene56272:CDS |
| TACAATGATCTTGAACTTGT+TGG | 0.381076 | 3.1:+4985027 | None:intergenic |
| AAACTTGGTAGGTTGAGTTT+TGG | 0.381311 | 3.1:-4984255 | MS.gene56272:CDS |
| TGTTACTAGAGATTCCTATC+TGG | 0.384104 | 3.1:+4986098 | None:intergenic |
| AGTTTGGAGTTTGTGGTAGC+AGG | 0.385757 | 3.1:+4985653 | None:intergenic |
| CGAAATTTCGGTTTGGATGT+TGG | 0.386736 | 3.1:-4984630 | MS.gene56272:CDS |
| AAGAACCAAATTTAGAGGCT+TGG | 0.392658 | 3.1:-4984896 | MS.gene56272:CDS |
| AAGTAATGTTGCCTTCAATA+AGG | 0.392759 | 3.1:+4983357 | None:intergenic |
| ATACAAAACAACTCGATGTT+AGG | 0.394100 | 3.1:+4983890 | None:intergenic |
| TGGTCCTTCTGCACTCTTTG+AGG | 0.395893 | 3.1:-4984193 | MS.gene56272:CDS |
| ACAAAACCATCTTGTACCTT+TGG | 0.400647 | 3.1:+4984703 | None:intergenic |
| TTGTTATCAGAACTTGGAAT+TGG | 0.400764 | 3.1:-4984213 | MS.gene56272:CDS |
| AAAGAGATTATGGAGATTGA+AGG | 0.401871 | 3.1:-4985083 | MS.gene56272:CDS |
| TGCAATCTCGGATCATTTAT+GGG | 0.402028 | 3.1:-4983674 | MS.gene56272:CDS |
| GAACAAAGAACCAAATTTAG+AGG | 0.404321 | 3.1:-4984901 | MS.gene56272:CDS |
| AAATCTGAGCTTGAGCTTCA+AGG | 0.405691 | 3.1:-4985560 | MS.gene56272:CDS |
| CCAACAAAATATGCATTCCT+TGG | 0.406509 | 3.1:+4985113 | None:intergenic |
| GGTATATAAGCTTAGAGATA+GGG | 0.408584 | 3.1:-4984926 | MS.gene56272:CDS |
| TTGTAACTCAAATTCAAGAT+TGG | 0.408723 | 3.1:-4983456 | MS.gene56272:CDS |
| GAACTACTAGGAACATCTTC+TGG | 0.416102 | 3.1:+4985827 | None:intergenic |
| GGTAATGTATCAAAGAATAT+AGG | 0.420107 | 3.1:+4985362 | None:intergenic |
| CTTATCACGAAATTTCGGTT+TGG | 0.426037 | 3.1:-4984637 | MS.gene56272:CDS |
| GCTTCCAAGTTTGGAGTTTG+TGG | 0.428689 | 3.1:+4985646 | None:intergenic |
| TTCATAAGGTGATGATTCTA+TGG | 0.430881 | 3.1:+4985988 | None:intergenic |
| GCAAGAAACCGGTGAGAAAC+CGG | 0.433038 | 3.1:+4982599 | None:intergenic |
| TGAGGTTTGGACTAGCAAAA+AGG | 0.433042 | 3.1:-4983822 | MS.gene56272:CDS |
| TAGCTCCACAACCGGAGGTT+CGG | 0.435214 | 3.1:+4983621 | None:intergenic |
| GCTATAAGAATGCTTCTTGT+CGG | 0.442381 | 3.1:-4984018 | MS.gene56272:CDS |
| TGGATTGAACAACCAATGAT+AGG | 0.442657 | 3.1:-4984876 | MS.gene56272:CDS |
| TTGCTCGGTTGCTTTCGGTT+TGG | 0.442747 | 3.1:-4985465 | MS.gene56272:CDS |
| GCAAATGAAACCCTAGGAAC+TGG | 0.443583 | 3.1:+4985692 | None:intergenic |
| ACGTCGGAATGGCAAGAAAC+CGG | 0.446878 | 3.1:+4982588 | None:intergenic |
| TGATAAACTCTTTGCTGCAT+TGG | 0.447557 | 3.1:+4983954 | None:intergenic |
| GGTCTCACGACTCGATTTGT+TGG | 0.449150 | 3.1:-4983435 | MS.gene56272:CDS |
| TTCAACTTCTTCAAGTGCAT+TGG | 0.451587 | 3.1:+4983486 | None:intergenic |
| GGTTCATTGTTATCAGAACT+TGG | 0.453724 | 3.1:-4984219 | MS.gene56272:CDS |
| AAATATGCATTCCTTGGAAA+AGG | 0.455022 | 3.1:+4985119 | None:intergenic |
| TTCGCAAAGGCTGCAATTCA+AGG | 0.455666 | 3.1:-4983718 | MS.gene56272:CDS |
| TCACCTCTTCCATGCTTAAA+CGG | 0.458625 | 3.1:+4985414 | None:intergenic |
| GGTGAATAACGTCGAATAGT+AGG | 0.458746 | 3.1:+4982517 | None:intergenic |
| GCAGGATGTTACCTTATTGA+AGG | 0.463282 | 3.1:-4983368 | MS.gene56272:CDS |
| TAGGAAGAATGTTGGTCATA+AGG | 0.467246 | 3.1:-4985177 | MS.gene56272:CDS |
| CAAACATTTGCTAAAAGAAC+AGG | 0.467837 | 3.1:-4983751 | MS.gene56272:CDS |
| ATTCTCATTTCCAGTTCCTA+GGG | 0.468075 | 3.1:-4985702 | MS.gene56272:CDS |
| GTCGAATAGTAGGATGAGTA+AGG | 0.468732 | 3.1:+4982527 | None:intergenic |
| GTCGCCTTTAGCTCCACAAC+CGG | 0.470867 | 3.1:+4983613 | None:intergenic |
| AAACGGTGAAATTCTCGATC+TGG | 0.471991 | 3.1:+4982656 | None:intergenic |
| GGTATCATAGTTCTTTACCT+TGG | 0.472603 | 3.1:+4984386 | None:intergenic |
| TTGCAAAAGCGAATAAGATT+CGG | 0.475368 | 3.1:+4985590 | None:intergenic |
| CAATGTCTCTTGAGCAGCCA+AGG | 0.477439 | 3.1:+4983222 | None:intergenic |
| GTGCTGATTCCGAGATTGAA+AGG | 0.478758 | 3.1:-4984608 | MS.gene56272:CDS |
| CTCATGTTATTATTACTACA+AGG | 0.478892 | 3.1:-4984413 | MS.gene56272:CDS |
| ATAGTACTAGTAGTAGGGTT+TGG | 0.478901 | 3.1:+4985887 | None:intergenic |
| CAAATCCGAACCTCCGGTTG+TGG | 0.478906 | 3.1:-4983626 | MS.gene56272:CDS |
| GGGTTTGGAACTGTGGCTCT+TGG | 0.479845 | 3.1:+4985902 | None:intergenic |
| AATTCGACCCCTTTCAATCT+CGG | 0.480583 | 3.1:+4984599 | None:intergenic |
| AATTCGCAGCTTTGAAGAGC+AGG | 0.480994 | 3.1:-4984580 | MS.gene56272:CDS |
| CAAATGTTTGTGTTATGGAA+TGG | 0.482901 | 3.1:+4983764 | None:intergenic |
| TGGATTCAAATCCGAACCTC+CGG | 0.483206 | 3.1:-4983632 | MS.gene56272:CDS |
| AAGAATAAGAAGTCAAAGAG+TGG | 0.488074 | 3.1:-4984831 | MS.gene56272:CDS |
| CTTCCATGCTTAAACGGTTG+AGG | 0.488878 | 3.1:+4985420 | None:intergenic |
| GCTACCACAAACTCCAAACT+TGG | 0.490521 | 3.1:-4985650 | MS.gene56272:CDS |
| AAGATGGAGAAAGCGAATAA+GGG | 0.491183 | 3.1:+4982496 | None:intergenic |
| TTCACTCCGACGTAATTATC+CGG | 0.492987 | 3.1:-4982329 | MS.gene56272:CDS |
| AACAGTGAGAATAGCGGTGC+CGG | 0.493096 | 3.1:+4982447 | None:intergenic |
| GTGAAAATCATCTCAAGAAG+TGG | 0.494213 | 3.1:-4983927 | MS.gene56272:CDS |
| GTGGAAAGACGAAGAAGATT+CGG | 0.495716 | 3.1:-4983857 | MS.gene56272:CDS |
| CCGTTTCCATATTCCGTCGC+CGG | 0.497841 | 3.1:-4982639 | MS.gene56272:CDS |
| GTGTCATCAGAAAACTCATA+AGG | 0.500099 | 3.1:+4985785 | None:intergenic |
| AATGAACAACCATGCAATCT+CGG | 0.501849 | 3.1:-4983686 | MS.gene56272:CDS |
| AATCTGCATTGAGTGAAACT+TGG | 0.503323 | 3.1:+4984163 | None:intergenic |
| CCGGCGATGGATTTCTGAAT+CGG | 0.503991 | 3.1:+4982466 | None:intergenic |
| ACCTCCGGTTGTGGAGCTAA+AGG | 0.506079 | 3.1:-4983617 | MS.gene56272:CDS |
| TCAAGAGACATTGGCAAGGT+TGG | 0.506244 | 3.1:-4983212 | MS.gene56272:intron |
| TGGCAATGGAGGAAGGTGAA+TGG | 0.506398 | 3.1:+4984365 | None:intergenic |
| GAAACAAGAGGTGATTCATA+AGG | 0.507418 | 3.1:+4985974 | None:intergenic |
| TTATCAATTATCAACAAGTA+AGG | 0.507724 | 3.1:+4984510 | None:intergenic |
| GTTTGGAGTTTGTGGTAGCA+GGG | 0.508931 | 3.1:+4985654 | None:intergenic |
| GAGAATAGCGGTGCCGGCGA+TGG | 0.509296 | 3.1:+4982453 | None:intergenic |
| TGCTGATTCCGAGATTGAAA+GGG | 0.509315 | 3.1:-4984607 | MS.gene56272:CDS |
| TAGTAATAGTACTAGTAGTA+GGG | 0.509727 | 3.1:+4985882 | None:intergenic |
| GAATGCTTCTTGTCGGTGGT+TGG | 0.509859 | 3.1:-4984011 | MS.gene56272:CDS |
| AGGACTAATCTACATGATGA+TGG | 0.510441 | 3.1:-4983802 | MS.gene56272:CDS |
| GTGAAATTCTCGATCTGGAA+AGG | 0.511066 | 3.1:+4982661 | None:intergenic |
| AGTATTAGAACTGTGATGCT+TGG | 0.511221 | 3.1:-4983262 | MS.gene56272:CDS |
| CAAGGTGGTAGCAACCAGAT+AGG | 0.519220 | 3.1:-4986112 | MS.gene56272:CDS |
| AGTGAAACTACGGTTGGAAA+AGG | 0.522401 | 3.1:-4984960 | MS.gene56272:CDS |
| TTGGAAAAGGCGGTGGTGGA+AGG | 0.525518 | 3.1:-4984947 | MS.gene56272:CDS |
| TGAAATTCTCGATCTGGAAA+GGG | 0.528161 | 3.1:+4982662 | None:intergenic |
| TATTACTACAAGGCTTTCCA+AGG | 0.531584 | 3.1:-4984403 | MS.gene56272:CDS |
| CAAGATCATTGTAGAGCAAG+TGG | 0.533092 | 3.1:-4985017 | MS.gene56272:CDS |
| AAGGATAATCATAATATGCT+AGG | 0.535401 | 3.1:-4985158 | MS.gene56272:CDS |
| AGTGGATGAATATGTTTGGC+AGG | 0.537936 | 3.1:-4983386 | MS.gene56272:CDS |
| AATGAGAATGAAATTCTTGG+AGG | 0.543849 | 3.1:+4985716 | None:intergenic |
| ACGGTTGGAAAAGGCGGTGG+TGG | 0.544364 | 3.1:-4984951 | MS.gene56272:CDS |
| GAAGAAAGTGAAACTACGGT+TGG | 0.545153 | 3.1:-4984966 | MS.gene56272:CDS |
| CATTGTAGAGCAAGTGGCAG+CGG | 0.545405 | 3.1:-4985011 | MS.gene56272:CDS |
| AGTGATAGAGAGGAATATCA+AGG | 0.546866 | 3.1:-4986130 | MS.gene56272:CDS |
| GAAAACTCATAAGGATCAGA+AGG | 0.548314 | 3.1:+4985794 | None:intergenic |
| AATCTTGATTGCGCCGGCGA+CGG | 0.548323 | 3.1:+4982626 | None:intergenic |
| CTTGGCTGCTCAAGAGACAT+TGG | 0.548804 | 3.1:-4983221 | MS.gene56272:CDS |
| CGCTGAGAATCACGTCGGAA+TGG | 0.548886 | 3.1:+4982577 | None:intergenic |
| GATTCTCACCGGTTTCTCAC+CGG | 0.551519 | 3.1:-4982607 | MS.gene56272:CDS |
| GGAGTGAATAACGTCGGAGA+AGG | 0.552299 | 3.1:+4982344 | None:intergenic |
| ACATAACCATGCACAAACCT+TGG | 0.553305 | 3.1:-4983239 | MS.gene56272:CDS |
| CAACCGTTTAAGCATGGAAG+AGG | 0.556457 | 3.1:-4985417 | MS.gene56272:CDS |
| TAAAGAATGTAAAGAAGCGA+TGG | 0.557061 | 3.1:-4985300 | MS.gene56272:CDS |
| AGGATCAGAAGGAGGGGTGT+AGG | 0.557170 | 3.1:+4985805 | None:intergenic |
| TGACTCTATCAGCAATCTCA+TGG | 0.557417 | 3.1:+4985489 | None:intergenic |
| ATTCGGCTGCGCTTCTCGTG+AGG | 0.559569 | 3.1:-4983840 | MS.gene56272:CDS |
| CAGATAATGGCAATGGAGGA+AGG | 0.560683 | 3.1:+4984358 | None:intergenic |
| TGCTGATAGAGTCATTTGCT+CGG | 0.561389 | 3.1:-4985480 | MS.gene56272:CDS |
| AGGAGTGTCTTCATGAGGAA+AGG | 0.561790 | 3.1:+4984090 | None:intergenic |
| AAGCGTTCAAGAGAATAAAG+AGG | 0.564173 | 3.1:-4984551 | MS.gene56272:CDS |
| GGAACATCTTCTGGTGTGGA+AGG | 0.564570 | 3.1:+4985836 | None:intergenic |
| TGAGACTGAAGAGGAATGGT+GGG | 0.564823 | 3.1:-4984484 | MS.gene56272:CDS |
| GGAAGCTGTGATGTCTACAT+TGG | 0.564889 | 3.1:-4985629 | MS.gene56272:CDS |
| AAATTTGCTGAAACTGGAGC+AGG | 0.566382 | 3.1:+4983982 | None:intergenic |
| ATCTTGAGACTGAAGAGGAA+TGG | 0.566670 | 3.1:-4984488 | MS.gene56272:CDS |
| GATGTCTACATTGGATTCCA+TGG | 0.568511 | 3.1:-4985620 | MS.gene56272:CDS |
| AGAAGTGACAGAATCTCAGC+AGG | 0.568637 | 3.1:+4985341 | None:intergenic |
| GAATGTAAAGAAGCGATGGA+TGG | 0.569620 | 3.1:-4985296 | MS.gene56272:CDS |
| TAGGAAACAATTCATTGAAG+AGG | 0.571931 | 3.1:-4984857 | MS.gene56272:CDS |
| TTTCCTCAACCGTTTAAGCA+TGG | 0.573519 | 3.1:-4985423 | MS.gene56272:CDS |
| TTGAGACTGAAGAGGAATGG+TGG | 0.573938 | 3.1:-4984485 | MS.gene56272:CDS |
| CTGAATCGGAAGAATCAAGA+TGG | 0.577231 | 3.1:+4982480 | None:intergenic |
| ATCTACATGATGATGGATGT+TGG | 0.579983 | 3.1:-4983795 | MS.gene56272:CDS |
| ATCTTGAATTTGAGTTACAA+AGG | 0.582732 | 3.1:+4983459 | None:intergenic |
| TGATAATCTTGAGACTGAAG+AGG | 0.583315 | 3.1:-4984493 | MS.gene56272:CDS |
| CTCATAAGGATCAGAAGGAG+GGG | 0.584162 | 3.1:+4985799 | None:intergenic |
| ATAAGAATGCTTCTTGTCGG+TGG | 0.585028 | 3.1:-4984015 | MS.gene56272:CDS |
| GGAGGGGTGTAGGAACTACT+AGG | 0.585887 | 3.1:+4985815 | None:intergenic |
| ATAAATGATCCGAGATTGCA+TGG | 0.587209 | 3.1:+4983677 | None:intergenic |
| ACTGAAGAGGAATGGTGGGA+AGG | 0.587834 | 3.1:-4984480 | MS.gene56272:CDS |
| AGGATTTGTAGTGGTGAAGG+TGG | 0.587983 | 3.1:+4985856 | None:intergenic |
| AGTAGTAGGGTTTGGAACTG+TGG | 0.588099 | 3.1:+4985895 | None:intergenic |
| ATATTACCAAAGGTACAAGA+TGG | 0.588299 | 3.1:-4984709 | MS.gene56272:CDS |
| GCATCTCGAAAACGCAGTGA+AGG | 0.590532 | 3.1:+4983540 | None:intergenic |
| GGCGCAATCAAGATTCTCAC+CGG | 0.591786 | 3.1:-4982618 | MS.gene56272:CDS |
| GAGCAGCCAAGGTTTGTGCA+TGG | 0.592360 | 3.1:+4983233 | None:intergenic |
| AGATGAAGAAAGTGAAACTA+CGG | 0.592811 | 3.1:-4984970 | MS.gene56272:CDS |
| CCGGCGACGGAATATGGAAA+CGG | 0.593242 | 3.1:+4982639 | None:intergenic |
| ATTGCATCAGATAATGGCAA+TGG | 0.594014 | 3.1:+4984351 | None:intergenic |
| TTCTTTGCAAATGAAACCCT+AGG | 0.597268 | 3.1:+4985686 | None:intergenic |
| ATAGCCTCAAAGAGTGCAGA+AGG | 0.598750 | 3.1:+4984189 | None:intergenic |
| AATTCTATGAGAAACTTGGT+AGG | 0.599038 | 3.1:-4984266 | MS.gene56272:CDS |
| GCATCAGATAATGGCAATGG+AGG | 0.599792 | 3.1:+4984354 | None:intergenic |
| AAAAGAGTATTCAATTGATG+AGG | 0.599982 | 3.1:-4984304 | MS.gene56272:CDS |
| GCCTTTAGCTCCACAACCGG+AGG | 0.602709 | 3.1:+4983616 | None:intergenic |
| GGTGAGAATCTTGATTGCGC+CGG | 0.604398 | 3.1:+4982620 | None:intergenic |
| ACTCATAAGGATCAGAAGGA+GGG | 0.604976 | 3.1:+4985798 | None:intergenic |
| GGAAGGATTTGTAGTGGTGA+AGG | 0.606188 | 3.1:+4985853 | None:intergenic |
| AACTCATAAGGATCAGAAGG+AGG | 0.608649 | 3.1:+4985797 | None:intergenic |
| TTTGATGTATAAAACCATGT+CGG | 0.610935 | 3.1:+4983591 | None:intergenic |
| GCTGAAACAAATGCTGATGA+AGG | 0.612105 | 3.1:+4985947 | None:intergenic |
| AGTGGCAGCGGACAATCTGA+AGG | 0.612931 | 3.1:-4984999 | MS.gene56272:CDS |
| AGACTTGGTAGGAAGAATGT+TGG | 0.613159 | 3.1:-4985185 | MS.gene56272:CDS |
| AGCGTTCAAGAGAATAAAGA+GGG | 0.613855 | 3.1:-4984550 | MS.gene56272:CDS |
| ACTAGGAACATCTTCTGGTG+TGG | 0.614082 | 3.1:+4985832 | None:intergenic |
| ATTCATGGAAAGTGATAGAG+AGG | 0.616199 | 3.1:-4986140 | None:intergenic |
| ATATAAGCTTAGAGATAGGG+AGG | 0.616295 | 3.1:-4984923 | MS.gene56272:CDS |
| ACATTTGCTAAAAGAACAGG+TGG | 0.617095 | 3.1:-4983748 | MS.gene56272:CDS |
| TTTGGAGTTTGTGGTAGCAG+GGG | 0.619019 | 3.1:+4985655 | None:intergenic |
| CCGATTCAGAAATCCATCGC+CGG | 0.619230 | 3.1:-4982466 | MS.gene56272:CDS |
| AGGACATTTAGACAGTGGTA+AGG | 0.621592 | 3.1:-4983305 | MS.gene56272:CDS |
| GCTAAGCTGTTAGCTAGAGG+AGG | 0.624818 | 3.1:-4983325 | MS.gene56272:CDS |
| GAAACAAATGCTGATGAAGG+TGG | 0.627253 | 3.1:+4985950 | None:intergenic |
| ACTACGGTTGGAAAAGGCGG+TGG | 0.627416 | 3.1:-4984954 | MS.gene56272:CDS |
| GGAGCTAAAGGCGACCGACA+TGG | 0.628008 | 3.1:-4983605 | MS.gene56272:CDS |
| TCGAATAGTAGGATGAGTAA+GGG | 0.628323 | 3.1:+4982528 | None:intergenic |
| AGGTGGTTTGAAATTCGCAA+AGG | 0.633537 | 3.1:-4983731 | MS.gene56272:CDS |
| TTGCTCATAGATATTACCAA+AGG | 0.634011 | 3.1:-4984719 | MS.gene56272:CDS |
| TGGTGTGGAAGGATTTGTAG+TGG | 0.638361 | 3.1:+4985847 | None:intergenic |
| AGAGCTAAGCTGTTAGCTAG+AGG | 0.639904 | 3.1:-4983328 | MS.gene56272:CDS |
| CACGTCGGAGTGAATAATCA+CGG | 0.644858 | 3.1:+4982398 | None:intergenic |
| TCAGTATTGCACAAGAACAA+TGG | 0.648299 | 3.1:-4984125 | MS.gene56272:CDS |
| GAATTAAGAGAATAACTCGC+CGG | 0.657388 | 3.1:+4982310 | None:intergenic |
| AGAGGAGGACATTTAGACAG+TGG | 0.660776 | 3.1:-4983310 | MS.gene56272:CDS |
| GCTGATTCCGAGATTGAAAG+GGG | 0.663123 | 3.1:-4984606 | MS.gene56272:CDS |
| GATAGAGAGGAATATCAAGG+TGG | 0.665112 | 3.1:-4986127 | MS.gene56272:CDS |
| CTGCTCAAGAGACATTGGCA+AGG | 0.674178 | 3.1:-4983216 | MS.gene56272:CDS |
| GAAACTACGGTTGGAAAAGG+CGG | 0.688660 | 3.1:-4984957 | MS.gene56272:CDS |
| GTGAAGGCTTGAATCGCGAG+CGG | 0.703011 | 3.1:+4983556 | None:intergenic |
| AACTCGCCGGATAATTACGT+CGG | 0.704362 | 3.1:+4982323 | None:intergenic |
| TCGAGAAACAGTGAGAATAG+CGG | 0.716997 | 3.1:+4982441 | None:intergenic |
| TACGTCGGAGTGAATAACGT+CGG | 0.717479 | 3.1:+4982338 | None:intergenic |
| GATGAAGGTGGAGAAACAAG+AGG | 0.729329 | 3.1:+4985962 | None:intergenic |
| GAGAAAGATGAGAATCACGT+CGG | 0.735837 | 3.1:+4982383 | None:intergenic |
| AGCGACGCTGAGAATCACGT+CGG | 0.757775 | 3.1:+4982572 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATATTTCATAGTTAAGAA+AGG | - | chr3.1:4985518-4985537 | MS.gene56272:CDS | 20.0% |
| !! | TTATCAATTATCAACAAGTA+AGG | + | chr3.1:4983866-4983885 | None:intergenic | 20.0% |
| ! | AAAAAGTGGATGAATATGTT+TGG | - | chr3.1:4984983-4985002 | MS.gene56272:CDS | 25.0% |
| ! | AAAATCATTGCATCAGATAA+TGG | + | chr3.1:4984031-4984050 | None:intergenic | 25.0% |
| ! | AAGGATAATCATAATATGCT+AGG | - | chr3.1:4983215-4983234 | MS.gene56272:CDS | 25.0% |
| ! | AATGAATTGTTTCCTATCAT+TGG | + | chr3.1:4983512-4983531 | None:intergenic | 25.0% |
| ! | CCAAAGTTTCTAAACAAAAA+AGG | + | chr3.1:4984306-4984325 | None:intergenic | 25.0% |
| ! | CTCATGTTATTATTACTACA+AGG | - | chr3.1:4983960-4983979 | MS.gene56272:CDS | 25.0% |
| ! | GAAAAATTCTATGAGAAACT+TGG | - | chr3.1:4984103-4984122 | MS.gene56272:CDS | 25.0% |
| ! | GGTAATGTATCAAAGAATAT+AGG | + | chr3.1:4983014-4983033 | None:intergenic | 25.0% |
| ! | TAGTAATAGTACTAGTAGTA+GGG | + | chr3.1:4982494-4982513 | None:intergenic | 25.0% |
| ! | TTGGAGAAAACTAAAGAAAA+AGG | - | chr3.1:4984322-4984341 | MS.gene56272:CDS | 25.0% |
| ! | TTGTAACTCAAATTCAAGAT+TGG | - | chr3.1:4984917-4984936 | MS.gene56272:CDS | 25.0% |
| ! | TTTAGCAAATGTTTGTGTTA+TGG | + | chr3.1:4984617-4984636 | None:intergenic | 25.0% |
| ! | TTTGATGTATAAAACCATGT+CGG | + | chr3.1:4984785-4984804 | None:intergenic | 25.0% |
| !! | ATCTTGAATTTGAGTTACAA+AGG | + | chr3.1:4984917-4984936 | None:intergenic | 25.0% |
| !! | GTTTCTCATAGAATTTTTCA+AGG | + | chr3.1:4984102-4984121 | None:intergenic | 25.0% |
| !!! | AAAAGAGTATTCAATTGATG+AGG | - | chr3.1:4984069-4984088 | MS.gene56272:CDS | 25.0% |
| !!! | CCTTTTTTGTTTAGAAACTT+TGG | - | chr3.1:4984303-4984322 | MS.gene56272:CDS | 25.0% |
| AAAGAGATTATGGAGATTGA+AGG | - | chr3.1:4983290-4983309 | MS.gene56272:CDS | 30.0% | |
| AAATATGCATTCCTTGGAAA+AGG | + | chr3.1:4983257-4983276 | None:intergenic | 30.0% | |
| AACATCTGTCATTGATCTAA+TGG | + | chr3.1:4985599-4985618 | None:intergenic | 30.0% | |
| AAGAATAAGAAGTCAAAGAG+TGG | - | chr3.1:4983542-4983561 | MS.gene56272:CDS | 30.0% | |
| AAGTAATGTTGCCTTCAATA+AGG | + | chr3.1:4985019-4985038 | None:intergenic | 30.0% | |
| AATGAGAATGAAATTCTTGG+AGG | + | chr3.1:4982660-4982679 | None:intergenic | 30.0% | |
| AATTCTATGAGAAACTTGGT+AGG | - | chr3.1:4984107-4984126 | MS.gene56272:CDS | 30.0% | |
| AGATGAAGAAAGTGAAACTA+CGG | - | chr3.1:4983403-4983422 | MS.gene56272:CDS | 30.0% | |
| AGGTATATAAGCTTAGAGAT+AGG | - | chr3.1:4983446-4983465 | MS.gene56272:CDS | 30.0% | |
| ATACAAAACAACTCGATGTT+AGG | + | chr3.1:4984486-4984505 | None:intergenic | 30.0% | |
| ATGTAAATGCACAAGACAAA+TGG | + | chr3.1:4985241-4985260 | None:intergenic | 30.0% | |
| ATTGATCTAATGGTTCAGAT+TGG | + | chr3.1:4985589-4985608 | None:intergenic | 30.0% | |
| CAAATGTTTGTGTTATGGAA+TGG | + | chr3.1:4984612-4984631 | None:intergenic | 30.0% | |
| CAACTATGTAATAAGATGAG+TGG | + | chr3.1:4985491-4985510 | None:intergenic | 30.0% | |
| CTGAACTTATCACGAAATTT+CGG | - | chr3.1:4983731-4983750 | MS.gene56272:CDS | 30.0% | |
| GAACAAAGAACCAAATTTAG+AGG | - | chr3.1:4983472-4983491 | MS.gene56272:CDS | 30.0% | |
| GGAAATGAGAATGAAATTCT+TGG | + | chr3.1:4982663-4982682 | None:intergenic | 30.0% | |
| GGTATATAAGCTTAGAGATA+GGG | - | chr3.1:4983447-4983466 | MS.gene56272:CDS | 30.0% | |
| GTAGTAATAGTACTAGTAGT+AGG | + | chr3.1:4982495-4982514 | None:intergenic | 30.0% | |
| TAAAGAATGTAAAGAAGCGA+TGG | - | chr3.1:4983073-4983092 | MS.gene56272:intron | 30.0% | |
| TACAATGATCTTGAACTTGT+TGG | + | chr3.1:4983349-4983368 | None:intergenic | 30.0% | |
| TAGGAAACAATTCATTGAAG+AGG | - | chr3.1:4983516-4983535 | MS.gene56272:CDS | 30.0% | |
| TGGAATTGGAAAATCTGAAT+TGG | - | chr3.1:4983622-4983641 | MS.gene56272:CDS | 30.0% | |
| TTAGTTCGCTTTCAACAAAT+GGG | + | chr3.1:4985395-4985414 | None:intergenic | 30.0% | |
| TTCATAAGGTGATGATTCTA+TGG | + | chr3.1:4982388-4982407 | None:intergenic | 30.0% | |
| TTGCAAAAGCGAATAAGATT+CGG | + | chr3.1:4982786-4982805 | None:intergenic | 30.0% | |
| TTGCTCATAGATATTACCAA+AGG | - | chr3.1:4983654-4983673 | MS.gene56272:CDS | 30.0% | |
| TTGTTATCAGAACTTGGAAT+TGG | - | chr3.1:4984160-4984179 | MS.gene56272:CDS | 30.0% | |
| ! | AGAGTTTATTACCTTTTCCA+AGG | - | chr3.1:4983243-4983262 | MS.gene56272:CDS | 30.0% |
| ! | ATATTACCAAAGGTACAAGA+TGG | - | chr3.1:4983664-4983683 | MS.gene56272:CDS | 30.0% |
| ! | CAAACATTTGCTAAAAGAAC+AGG | - | chr3.1:4984622-4984641 | MS.gene56272:CDS | 30.0% |
| ! | TCTATGGAAGTTTTTGTGTT+TGG | + | chr3.1:4982372-4982391 | None:intergenic | 30.0% |
| ! | TTTAGTTCGCTTTCAACAAA+TGG | + | chr3.1:4985396-4985415 | None:intergenic | 30.0% |
| !! | ACTCGATTTGTTGGAAAAAA+AGG | - | chr3.1:4984947-4984966 | MS.gene56272:CDS | 30.0% |
| !! | AGTATTTTAAGAGCAAGACT+TGG | - | chr3.1:4983173-4983192 | MS.gene56272:intron | 30.0% |
| !! | GAGATTGAAGGTTTACTTTT+TGG | - | chr3.1:4983302-4983321 | MS.gene56272:CDS | 30.0% |
| !! | GATGCAATGATTTTGATAAG+AGG | - | chr3.1:4984037-4984056 | MS.gene56272:CDS | 30.0% |
| !! | TGGAAGTAGGAATTGTTTTA+TGG | - | chr3.1:4983322-4983341 | MS.gene56272:CDS | 30.0% |
| !!! | AAGGTTTACTTTTTGGAAGT+AGG | - | chr3.1:4983309-4983328 | MS.gene56272:CDS | 30.0% |
| !!! | AGTTTTGGTTTGATGATGAT+TGG | - | chr3.1:4984133-4984152 | MS.gene56272:CDS | 30.0% |
| !!! | GAATCAGCTTTTCTTGTTTT+TGG | - | chr3.1:4984721-4984740 | MS.gene56272:CDS | 30.0% |
| AAGAACCAAATTTAGAGGCT+TGG | - | chr3.1:4983477-4983496 | MS.gene56272:CDS | 35.0% | |
| AAGATGGAGAAAGCGAATAA+GGG | + | chr3.1:4985880-4985899 | None:intergenic | 35.0% | |
| AAGCGTTCAAGAGAATAAAG+AGG | - | chr3.1:4983822-4983841 | MS.gene56272:CDS | 35.0% | |
| AATCTGCATTGAGTGAAACT+TGG | + | chr3.1:4984213-4984232 | None:intergenic | 35.0% | |
| AATGAACAACCATGCAATCT+CGG | - | chr3.1:4984687-4984706 | MS.gene56272:CDS | 35.0% | |
| ACAAAACCATCTTGTACCTT+TGG | + | chr3.1:4983673-4983692 | None:intergenic | 35.0% | |
| AGCGTTCAAGAGAATAAAGA+GGG | - | chr3.1:4983823-4983842 | MS.gene56272:CDS | 35.0% | |
| AGGACTAATCTACATGATGA+TGG | - | chr3.1:4984571-4984590 | MS.gene56272:CDS | 35.0% | |
| AGTATTAGAACTGTGATGCT+TGG | - | chr3.1:4985111-4985130 | MS.gene56272:CDS | 35.0% | |
| AGTGATAGAGAGGAATATCA+AGG | - | chr3.1:4982243-4982262 | MS.gene56272:CDS | 35.0% | |
| ATAAATGATCCGAGATTGCA+TGG | + | chr3.1:4984699-4984718 | None:intergenic | 35.0% | |
| ATAGTACTAGTAGTAGGGTT+TGG | + | chr3.1:4982489-4982508 | None:intergenic | 35.0% | |
| ATATAAGCTTAGAGATAGGG+AGG | - | chr3.1:4983450-4983469 | MS.gene56272:CDS | 35.0% | |
| ATGCAATCTCGGATCATTTA+TGG | - | chr3.1:4984698-4984717 | MS.gene56272:CDS | 35.0% | |
| ATTCTCATTTCCAGTTCCTA+GGG | - | chr3.1:4982671-4982690 | MS.gene56272:CDS | 35.0% | |
| ATTTGCATTAGTGGAGTTTC+TGG | - | chr3.1:4983602-4983621 | MS.gene56272:CDS | 35.0% | |
| CCAACAAAATATGCATTCCT+TGG | + | chr3.1:4983263-4983282 | None:intergenic | 35.0% | |
| CCAACTAGCATCAAAAAACA+AGG | - | chr3.1:4982318-4982337 | MS.gene56272:CDS | 35.0% | |
| CCCAAATATATCATAACCGT+CGG | - | chr3.1:4985636-4985655 | MS.gene56272:CDS | 35.0% | |
| CCGACGGTTATGATATATTT+GGG | + | chr3.1:4985639-4985658 | None:intergenic | 35.0% | |
| CTTATCACGAAATTTCGGTT+TGG | - | chr3.1:4983736-4983755 | MS.gene56272:CDS | 35.0% | |
| GAAAACTCATAAGGATCAGA+AGG | + | chr3.1:4982582-4982601 | None:intergenic | 35.0% | |
| GAAACAAGAGGTGATTCATA+AGG | + | chr3.1:4982402-4982421 | None:intergenic | 35.0% | |
| GAATTAAGAGAATAACTCGC+CGG | + | chr3.1:4986066-4986085 | None:intergenic | 35.0% | |
| GCTATAAGAATGCTTCTTGT+CGG | - | chr3.1:4984355-4984374 | MS.gene56272:CDS | 35.0% | |
| GGCACAAGTTATTATGCATA+AGG | - | chr3.1:4985539-4985558 | MS.gene56272:CDS | 35.0% | |
| GGTATCATAGTTCTTTACCT+TGG | + | chr3.1:4983990-4984009 | None:intergenic | 35.0% | |
| GGTTCATTGTTATCAGAACT+TGG | - | chr3.1:4984154-4984173 | MS.gene56272:CDS | 35.0% | |
| GTGAAAATCATCTCAAGAAG+TGG | - | chr3.1:4984446-4984465 | MS.gene56272:CDS | 35.0% | |
| GTGGAGATGTAATGTTACTA+TGG | - | chr3.1:4985289-4985308 | MS.gene56272:CDS | 35.0% | |
| GTGTCATCAGAAAACTCATA+AGG | + | chr3.1:4982591-4982610 | None:intergenic | 35.0% | |
| TAGGAAGAATGTTGGTCATA+AGG | - | chr3.1:4983196-4983215 | MS.gene56272:intron | 35.0% | |
| TATTACTACAAGGCTTTCCA+AGG | - | chr3.1:4983970-4983989 | MS.gene56272:CDS | 35.0% | |
| TCAATCCAAGCCTCTAAATT+TGG | + | chr3.1:4983485-4983504 | None:intergenic | 35.0% | |
| TCAGTATTGCACAAGAACAA+TGG | - | chr3.1:4984248-4984267 | MS.gene56272:CDS | 35.0% | |
| TCCGACGGTTATGATATATT+TGG | + | chr3.1:4985640-4985659 | None:intergenic | 35.0% | |
| TCGAATAGTAGGATGAGTAA+GGG | + | chr3.1:4985848-4985867 | None:intergenic | 35.0% | |
| TGAAATTCTCGATCTGGAAA+GGG | + | chr3.1:4985714-4985733 | None:intergenic | 35.0% | |
| TGATAAACTCTTTGCTGCAT+TGG | + | chr3.1:4984422-4984441 | None:intergenic | 35.0% | |
| TGATAATCTTGAGACTGAAG+AGG | - | chr3.1:4983880-4983899 | MS.gene56272:CDS | 35.0% | |
| TGCAATCTCGGATCATTTAT+GGG | - | chr3.1:4984699-4984718 | MS.gene56272:CDS | 35.0% | |
| TGGAAGAGAGAAAGAGATTA+TGG | - | chr3.1:4983280-4983299 | MS.gene56272:CDS | 35.0% | |
| TGGATTGAACAACCAATGAT+AGG | - | chr3.1:4983497-4983516 | MS.gene56272:CDS | 35.0% | |
| TGTTACTAGAGATTCCTATC+TGG | + | chr3.1:4982278-4982297 | None:intergenic | 35.0% | |
| TTCAACTTCTTCAAGTGCAT+TGG | + | chr3.1:4984890-4984909 | None:intergenic | 35.0% | |
| TTCTTTGCAAATGAAACCCT+AGG | + | chr3.1:4982690-4982709 | None:intergenic | 35.0% | |
| TTGATACCGAAAAACAACAC+AGG | - | chr3.1:4983932-4983951 | MS.gene56272:CDS | 35.0% | |
| ! | ACATTTGCTAAAAGAACAGG+TGG | - | chr3.1:4984625-4984644 | MS.gene56272:CDS | 35.0% |
| ! | AGAATAAAGAGGGAGCTTTT+TGG | - | chr3.1:4983833-4983852 | MS.gene56272:CDS | 35.0% |
| ! | AGTAGTGTGATTTGCATTAG+TGG | - | chr3.1:4983593-4983612 | MS.gene56272:CDS | 35.0% |
| ! | ATTGCATCAGATAATGGCAA+TGG | + | chr3.1:4984025-4984044 | None:intergenic | 35.0% |
| ! | CCAAGGAATGCATATTTTGT+TGG | - | chr3.1:4983260-4983279 | MS.gene56272:CDS | 35.0% |
| ! | TAAGATTCGGATTTTGTCCA+TGG | + | chr3.1:4982773-4982792 | None:intergenic | 35.0% |
| ! | TTTTGTCTAGAGGCTAATGA+TGG | - | chr3.1:4983119-4983138 | MS.gene56272:intron | 35.0% |
| !! | AAAAAAGGAGTGTCTTCATG+AGG | + | chr3.1:4984291-4984310 | None:intergenic | 35.0% |
| !! | AAACTTGGTAGGTTGAGTTT+TGG | - | chr3.1:4984118-4984137 | MS.gene56272:CDS | 35.0% |
| !! | AAAGGTACAAGATGGTTTTG+TGG | - | chr3.1:4983672-4983691 | MS.gene56272:CDS | 35.0% |
| !! | ATCTACATGATGATGGATGT+TGG | - | chr3.1:4984578-4984597 | MS.gene56272:CDS | 35.0% |
| !! | ATCTTATTCGCTTTTGCAAG+TGG | - | chr3.1:4982787-4982806 | MS.gene56272:intron | 35.0% |
| !! | ATTAGTGGAGTTTCTGGAAT+TGG | - | chr3.1:4983608-4983627 | MS.gene56272:CDS | 35.0% |
| !! | GAAGTTTTTGTGTTTGGTGA+AGG | + | chr3.1:4982366-4982385 | None:intergenic | 35.0% |
| !! | GCTAACAAATTTGCTGAAAC+TGG | + | chr3.1:4984400-4984419 | None:intergenic | 35.0% |
| !! | TTTTAAGAGCAAGACTTGGT+AGG | - | chr3.1:4983177-4983196 | MS.gene56272:intron | 35.0% |
| !!! | CCTTGTTTTTTGATGCTAGT+TGG | + | chr3.1:4982321-4982340 | None:intergenic | 35.0% |
| !!! | TACAAGATGGTTTTGTGGAT+TGG | - | chr3.1:4983677-4983696 | MS.gene56272:CDS | 35.0% |
| AAACGGTGAAATTCTCGATC+TGG | + | chr3.1:4985720-4985739 | None:intergenic | 40.0% | |
| AAATCTGAGCTTGAGCTTCA+AGG | - | chr3.1:4982813-4982832 | MS.gene56272:intron | 40.0% | |
| AACACGTGTACAAAATCCGA+CGG | + | chr3.1:4985655-4985674 | None:intergenic | 40.0% | |
| AACTCATAAGGATCAGAAGG+AGG | + | chr3.1:4982579-4982598 | None:intergenic | 40.0% | |
| AATTCGACCCCTTTCAATCT+CGG | + | chr3.1:4983777-4983796 | None:intergenic | 40.0% | |
| ACATAACCATGCACAAACCT+TGG | - | chr3.1:4985134-4985153 | MS.gene56272:CDS | 40.0% | |
| ACTCATAAGGATCAGAAGGA+GGG | + | chr3.1:4982578-4982597 | None:intergenic | 40.0% | |
| AGGACATTTAGACAGTGGTA+AGG | - | chr3.1:4985068-4985087 | MS.gene56272:CDS | 40.0% | |
| AGTGAAACTACGGTTGGAAA+AGG | - | chr3.1:4983413-4983432 | MS.gene56272:CDS | 40.0% | |
| AGTGGATGAATATGTTTGGC+AGG | - | chr3.1:4984987-4985006 | MS.gene56272:CDS | 40.0% | |
| ATAAGAATGCTTCTTGTCGG+TGG | - | chr3.1:4984358-4984377 | MS.gene56272:CDS | 40.0% | |
| ATACATGACACCACTTGTAG+TGG | - | chr3.1:4985270-4985289 | MS.gene56272:CDS | 40.0% | |
| ATACCGAAAAACAACACAGG+AGG | - | chr3.1:4983935-4983954 | MS.gene56272:CDS | 40.0% | |
| ATCTTGAGACTGAAGAGGAA+TGG | - | chr3.1:4983885-4983904 | MS.gene56272:CDS | 40.0% | |
| ATTCTTGGAGGAACTGTTTC+AGG | + | chr3.1:4982648-4982667 | None:intergenic | 40.0% | |
| CAAGATCATTGTAGAGCAAG+TGG | - | chr3.1:4983356-4983375 | MS.gene56272:CDS | 40.0% | |
| CAAGATGGAGAAAGCGAATA+AGG | + | chr3.1:4985881-4985900 | None:intergenic | 40.0% | |
| CATTACATCTCCACTACAAG+TGG | + | chr3.1:4985283-4985302 | None:intergenic | 40.0% | |
| CATTCTCATTTCCAGTTCCT+AGG | - | chr3.1:4982670-4982689 | MS.gene56272:CDS | 40.0% | |
| CTGAATCGGAAGAATCAAGA+TGG | + | chr3.1:4985896-4985915 | None:intergenic | 40.0% | |
| GAAACAAATGCTGATGAAGG+TGG | + | chr3.1:4982426-4982445 | None:intergenic | 40.0% | |
| GAACTACTAGGAACATCTTC+TGG | + | chr3.1:4982549-4982568 | None:intergenic | 40.0% | |
| GAAGAAAGTGAAACTACGGT+TGG | - | chr3.1:4983407-4983426 | MS.gene56272:CDS | 40.0% | |
| GAATGTAAAGAAGCGATGGA+TGG | - | chr3.1:4983077-4983096 | MS.gene56272:intron | 40.0% | |
| GAGAAAGATGAGAATCACGT+CGG | + | chr3.1:4985993-4986012 | None:intergenic | 40.0% | |
| GATAGAGAGGAATATCAAGG+TGG | - | chr3.1:4982246-4982265 | MS.gene56272:CDS | 40.0% | |
| GATGTCTACATTGGATTCCA+TGG | - | chr3.1:4982753-4982772 | MS.gene56272:intron | 40.0% | |
| GCAGGATGTTACCTTATTGA+AGG | - | chr3.1:4985005-4985024 | MS.gene56272:CDS | 40.0% | |
| GCTGAAACAAATGCTGATGA+AGG | + | chr3.1:4982429-4982448 | None:intergenic | 40.0% | |
| GGTGAATAACGTCGAATAGT+AGG | + | chr3.1:4985859-4985878 | None:intergenic | 40.0% | |
| GTCGAATAGTAGGATGAGTA+AGG | + | chr3.1:4985849-4985868 | None:intergenic | 40.0% | |
| GTGAAATTCTCGATCTGGAA+AGG | + | chr3.1:4985715-4985734 | None:intergenic | 40.0% | |
| GTGGAAAGACGAAGAAGATT+CGG | - | chr3.1:4984516-4984535 | MS.gene56272:CDS | 40.0% | |
| GTGGCTCTTGGAGATATATA+TGG | + | chr3.1:4982462-4982481 | None:intergenic | 40.0% | |
| GTTGCAAAGACGACAAAAAG+TGG | - | chr3.1:4984969-4984988 | MS.gene56272:CDS | 40.0% | |
| TACCGAAAAACAACACAGGA+GGG | - | chr3.1:4983936-4983955 | MS.gene56272:CDS | 40.0% | |
| TCACCTCTTCCATGCTTAAA+CGG | + | chr3.1:4982962-4982981 | None:intergenic | 40.0% | |
| TCGAGAAACAGTGAGAATAG+CGG | + | chr3.1:4985935-4985954 | None:intergenic | 40.0% | |
| TGACTCTATCAGCAATCTCA+TGG | + | chr3.1:4982887-4982906 | None:intergenic | 40.0% | |
| TGCTGATAGAGTCATTTGCT+CGG | - | chr3.1:4982893-4982912 | MS.gene56272:intron | 40.0% | |
| TTCACTCCGACGTAATTATC+CGG | - | chr3.1:4986044-4986063 | MS.gene56272:CDS | 40.0% | |
| TTTCCTCAACCGTTTAAGCA+TGG | - | chr3.1:4982950-4982969 | MS.gene56272:intron | 40.0% | |
| ! | AGACTTGGTAGGAAGAATGT+TGG | - | chr3.1:4983188-4983207 | MS.gene56272:intron | 40.0% |
| ! | AGGTGGTTTGAAATTCGCAA+AGG | - | chr3.1:4984642-4984661 | MS.gene56272:CDS | 40.0% |
| !! | AAATTTGCTGAAACTGGAGC+AGG | + | chr3.1:4984394-4984413 | None:intergenic | 40.0% |
| !! | CGAAATTTCGGTTTGGATGT+TGG | - | chr3.1:4983743-4983762 | MS.gene56272:CDS | 40.0% |
| !! | GTGCAATGAGTTTTGTCTAG+AGG | - | chr3.1:4983109-4983128 | MS.gene56272:intron | 40.0% |
| !! | GTGCATTGGTGCAAACTTTT+AGG | + | chr3.1:4984876-4984895 | None:intergenic | 40.0% |
| !! | TGAGGTTTGGACTAGCAAAA+AGG | - | chr3.1:4984551-4984570 | MS.gene56272:CDS | 40.0% |
| !! | TGCTGATTCCGAGATTGAAA+GGG | - | chr3.1:4983766-4983785 | MS.gene56272:CDS | 40.0% |
| !!! | AAGATGGTTTTGTGGATTGG+TGG | - | chr3.1:4983680-4983699 | MS.gene56272:CDS | 40.0% |
| AACTCGCCGGATAATTACGT+CGG | + | chr3.1:4986053-4986072 | None:intergenic | 45.0% | |
| ACTAGGAACATCTTCTGGTG+TGG | + | chr3.1:4982544-4982563 | None:intergenic | 45.0% | |
| AGAAGTGACAGAATCTCAGC+AGG | + | chr3.1:4983035-4983054 | None:intergenic | 45.0% | |
| AGAGCTAAGCTGTTAGCTAG+AGG | - | chr3.1:4985045-4985064 | MS.gene56272:CDS | 45.0% | |
| AGAGGAGGACATTTAGACAG+TGG | - | chr3.1:4985063-4985082 | MS.gene56272:CDS | 45.0% | |
| AGGATTTGTAGTGGTGAAGG+TGG | + | chr3.1:4982520-4982539 | None:intergenic | 45.0% | |
| CAACCGTTTAAGCATGGAAG+AGG | - | chr3.1:4982956-4982975 | MS.gene56272:intron | 45.0% | |
| CACGTCGGAGTGAATAATCA+CGG | + | chr3.1:4985978-4985997 | None:intergenic | 45.0% | |
| CTCATAAGGATCAGAAGGAG+GGG | + | chr3.1:4982577-4982596 | None:intergenic | 45.0% | |
| CTTCCATGCTTAAACGGTTG+AGG | + | chr3.1:4982956-4982975 | None:intergenic | 45.0% | |
| GAAACTACGGTTGGAAAAGG+CGG | - | chr3.1:4983416-4983435 | MS.gene56272:CDS | 45.0% | |
| GACATCACAGCTTCCAAGTT+TGG | + | chr3.1:4982739-4982758 | None:intergenic | 45.0% | |
| GATGAAGGTGGAGAAACAAG+AGG | + | chr3.1:4982414-4982433 | None:intergenic | 45.0% | |
| GCAAATGAAACCCTAGGAAC+TGG | + | chr3.1:4982684-4982703 | None:intergenic | 45.0% | |
| GCTACCACAAACTCCAAACT+TGG | - | chr3.1:4982723-4982742 | MS.gene56272:intron | 45.0% | |
| GGAAGCTGTGATGTCTACAT+TGG | - | chr3.1:4982744-4982763 | MS.gene56272:intron | 45.0% | |
| GGAAGGATTTGTAGTGGTGA+AGG | + | chr3.1:4982523-4982542 | None:intergenic | 45.0% | |
| TACGTCGGAGTGAATAACGT+CGG | + | chr3.1:4986038-4986057 | None:intergenic | 45.0% | |
| TCAAGAGACATTGGCAAGGT+TGG | - | chr3.1:4985161-4985180 | MS.gene56272:CDS | 45.0% | |
| TGAGACTGAAGAGGAATGGT+GGG | - | chr3.1:4983889-4983908 | MS.gene56272:CDS | 45.0% | |
| TGGATTCAAATCCGAACCTC+CGG | - | chr3.1:4984741-4984760 | MS.gene56272:CDS | 45.0% | |
| TGGTGTGGAAGGATTTGTAG+TGG | + | chr3.1:4982529-4982548 | None:intergenic | 45.0% | |
| TTCGCAAAGGCTGCAATTCA+AGG | - | chr3.1:4984655-4984674 | MS.gene56272:CDS | 45.0% | |
| TTGAGACTGAAGAGGAATGG+TGG | - | chr3.1:4983888-4983907 | MS.gene56272:CDS | 45.0% | |
| ! | AGTAGTAGGGTTTGGAACTG+TGG | + | chr3.1:4982481-4982500 | None:intergenic | 45.0% |
| ! | AGTTTGGAGTTTGTGGTAGC+AGG | + | chr3.1:4982723-4982742 | None:intergenic | 45.0% |
| ! | ATAGCCTCAAAGAGTGCAGA+AGG | + | chr3.1:4984187-4984206 | None:intergenic | 45.0% |
| ! | CAGATAATGGCAATGGAGGA+AGG | + | chr3.1:4984018-4984037 | None:intergenic | 45.0% |
| ! | GCATCAGATAATGGCAATGG+AGG | + | chr3.1:4984022-4984041 | None:intergenic | 45.0% |
| ! | GCTGATTCCGAGATTGAAAG+GGG | - | chr3.1:4983767-4983786 | MS.gene56272:CDS | 45.0% |
| ! | GCTTCCAAGTTTGGAGTTTG+TGG | + | chr3.1:4982730-4982749 | None:intergenic | 45.0% |
| ! | GTCATTTGCTCGGTTGCTTT+CGG | - | chr3.1:4982903-4982922 | MS.gene56272:intron | 45.0% |
| ! | GTTTGGAGTTTGTGGTAGCA+GGG | + | chr3.1:4982722-4982741 | None:intergenic | 45.0% |
| ! | TTTGGAGTTTGTGGTAGCAG+GGG | + | chr3.1:4982721-4982740 | None:intergenic | 45.0% |
| !! | AATTCGCAGCTTTGAAGAGC+AGG | - | chr3.1:4983793-4983812 | MS.gene56272:CDS | 45.0% |
| !! | AGGAGTGTCTTCATGAGGAA+AGG | + | chr3.1:4984286-4984305 | None:intergenic | 45.0% |
| !! | CGAGTTGTTTTGTATCGTCG+CGG | - | chr3.1:4984491-4984510 | MS.gene56272:CDS | 45.0% |
| !! | GGTTCAGATTGGCTTATGCA+TGG | + | chr3.1:4985578-4985597 | None:intergenic | 45.0% |
| !! | GTGCTGATTCCGAGATTGAA+AGG | - | chr3.1:4983765-4983784 | MS.gene56272:CDS | 45.0% |
| !!! | GTCCCTCCTGTGTTGTTTTT+CGG | + | chr3.1:4983941-4983960 | None:intergenic | 45.0% |
| AACAGTGAGAATAGCGGTGC+CGG | + | chr3.1:4985929-4985948 | None:intergenic | 50.0% | |
| ACGTCGGAATGGCAAGAAAC+CGG | + | chr3.1:4985788-4985807 | None:intergenic | 50.0% | |
| CAAGGTGGTAGCAACCAGAT+AGG | - | chr3.1:4982261-4982280 | MS.gene56272:CDS | 50.0% | |
| CAATGTCTCTTGAGCAGCCA+AGG | + | chr3.1:4985154-4985173 | None:intergenic | 50.0% | |
| CATTGTAGAGCAAGTGGCAG+CGG | - | chr3.1:4983362-4983381 | MS.gene56272:CDS | 50.0% | |
| CCGATTCAGAAATCCATCGC+CGG | - | chr3.1:4985907-4985926 | MS.gene56272:CDS | 50.0% | |
| CTGCTCAAGAGACATTGGCA+AGG | - | chr3.1:4985157-4985176 | MS.gene56272:CDS | 50.0% | |
| CTTGGCTGCTCAAGAGACAT+TGG | - | chr3.1:4985152-4985171 | MS.gene56272:CDS | 50.0% | |
| GAATGCTTCTTGTCGGTGGT+TGG | - | chr3.1:4984362-4984381 | MS.gene56272:CDS | 50.0% | |
| GCAAGAAACCGGTGAGAAAC+CGG | + | chr3.1:4985777-4985796 | None:intergenic | 50.0% | |
| GCATCTCGAAAACGCAGTGA+AGG | + | chr3.1:4984836-4984855 | None:intergenic | 50.0% | |
| GCTAAGCTGTTAGCTAGAGG+AGG | - | chr3.1:4985048-4985067 | MS.gene56272:CDS | 50.0% | |
| GGAACATCTTCTGGTGTGGA+AGG | + | chr3.1:4982540-4982559 | None:intergenic | 50.0% | |
| GGAGTGAATAACGTCGGAGA+AGG | + | chr3.1:4986032-4986051 | None:intergenic | 50.0% | |
| GGCGCAATCAAGATTCTCAC+CGG | - | chr3.1:4985755-4985774 | MS.gene56272:CDS | 50.0% | |
| GGTGAGAATCTTGATTGCGC+CGG | + | chr3.1:4985756-4985775 | None:intergenic | 50.0% | |
| TGGCAATGGAGGAAGGTGAA+TGG | + | chr3.1:4984011-4984030 | None:intergenic | 50.0% | |
| TGGTCCTTCTGCACTCTTTG+AGG | - | chr3.1:4984180-4984199 | MS.gene56272:CDS | 50.0% | |
| ! | ACTGAAGAGGAATGGTGGGA+AGG | - | chr3.1:4983893-4983912 | MS.gene56272:CDS | 50.0% |
| ! | CCGGCGATGGATTTCTGAAT+CGG | + | chr3.1:4985910-4985929 | None:intergenic | 50.0% |
| ! | GGTCTCACGACTCGATTTGT+TGG | - | chr3.1:4984938-4984957 | MS.gene56272:CDS | 50.0% |
| ! | TTGCTCGGTTGCTTTCGGTT+TGG | - | chr3.1:4982908-4982927 | MS.gene56272:intron | 50.0% |
| !! | GATTCTCACCGGTTTCTCAC+CGG | - | chr3.1:4985766-4985785 | MS.gene56272:CDS | 50.0% |
| !! | TGGCAAGGTTGGTGAGAATG+AGG | - | chr3.1:4985172-4985191 | MS.gene56272:CDS | 50.0% |
| ACCTCCGGTTGTGGAGCTAA+AGG | - | chr3.1:4984756-4984775 | MS.gene56272:CDS | 55.0% | |
| ACTACGGTTGGAAAAGGCGG+TGG | - | chr3.1:4983419-4983438 | MS.gene56272:CDS | 55.0% | |
| AGCGACGCTGAGAATCACGT+CGG | + | chr3.1:4985804-4985823 | None:intergenic | 55.0% | |
| AGTGGCAGCGGACAATCTGA+AGG | - | chr3.1:4983374-4983393 | MS.gene56272:CDS | 55.0% | |
| CAAATCCGAACCTCCGGTTG+TGG | - | chr3.1:4984747-4984766 | MS.gene56272:CDS | 55.0% | |
| CCGGCGACGGAATATGGAAA+CGG | + | chr3.1:4985737-4985756 | None:intergenic | 55.0% | |
| CCGTTTCCATATTCCGTCGC+CGG | - | chr3.1:4985734-4985753 | MS.gene56272:CDS | 55.0% | |
| CGCTGAGAATCACGTCGGAA+TGG | + | chr3.1:4985799-4985818 | None:intergenic | 55.0% | |
| GAGCAGCCAAGGTTTGTGCA+TGG | + | chr3.1:4985143-4985162 | None:intergenic | 55.0% | |
| GTGAAGGCTTGAATCGCGAG+CGG | + | chr3.1:4984820-4984839 | None:intergenic | 55.0% | |
| TAGCTCCACAACCGGAGGTT+CGG | + | chr3.1:4984755-4984774 | None:intergenic | 55.0% | |
| ! | AATCTTGATTGCGCCGGCGA+CGG | + | chr3.1:4985750-4985769 | None:intergenic | 55.0% |
| ! | AGGATCAGAAGGAGGGGTGT+AGG | + | chr3.1:4982571-4982590 | None:intergenic | 55.0% |
| ! | GGAGGGGTGTAGGAACTACT+AGG | + | chr3.1:4982561-4982580 | None:intergenic | 55.0% |
| ! | GGGTTTGGAACTGTGGCTCT+TGG | + | chr3.1:4982474-4982493 | None:intergenic | 55.0% |
| ! | GTCGCCTTTAGCTCCACAAC+CGG | + | chr3.1:4984763-4984782 | None:intergenic | 55.0% |
| ! | GTTTTGTATCGTCGCGGACG+TGG | - | chr3.1:4984497-4984516 | MS.gene56272:CDS | 55.0% |
| !! | TTGGAAAAGGCGGTGGTGGA+AGG | - | chr3.1:4983426-4983445 | MS.gene56272:CDS | 55.0% |
| ACGGTTGGAAAAGGCGGTGG+TGG | - | chr3.1:4983422-4983441 | MS.gene56272:CDS | 60.0% | |
| ATTCGGCTGCGCTTCTCGTG+AGG | - | chr3.1:4984533-4984552 | MS.gene56272:CDS | 60.0% | |
| GCTGCGCTTCTCGTGAGGTT+TGG | - | chr3.1:4984538-4984557 | MS.gene56272:CDS | 60.0% | |
| GGAGCTAAAGGCGACCGACA+TGG | - | chr3.1:4984768-4984787 | MS.gene56272:CDS | 60.0% | |
| ! | ATTGCGCCGGCGACGGAATA+TGG | + | chr3.1:4985743-4985762 | None:intergenic | 60.0% |
| ! | GCCTTTAGCTCCACAACCGG+AGG | + | chr3.1:4984760-4984779 | None:intergenic | 60.0% |
| !! | GAGAATAGCGGTGCCGGCGA+TGG | + | chr3.1:4985923-4985942 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 4982237 | 4986158 | 4982237 | ID=MS.gene56272 |
| chr3.1 | mRNA | 4982237 | 4986158 | 4982237 | ID=MS.gene56272.t1;Parent=MS.gene56272 |
| chr3.1 | exon | 4983213 | 4986158 | 4983213 | ID=MS.gene56272.t1.exon1;Parent=MS.gene56272.t1 |
| chr3.1 | CDS | 4983213 | 4986158 | 4983213 | ID=cds.MS.gene56272.t1;Parent=MS.gene56272.t1 |
| chr3.1 | exon | 4982237 | 4982692 | 4982237 | ID=MS.gene56272.t1.exon2;Parent=MS.gene56272.t1 |
| chr3.1 | CDS | 4982237 | 4982692 | 4982237 | ID=cds.MS.gene56272.t1;Parent=MS.gene56272.t1 |
| Gene Sequence |
| Protein sequence |
