Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56721.t1 | XP_003588461.2 | 97.8 | 269 | 6 | 0 | 1 | 269 | 110 | 378 | 5.30E-144 | 520.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56721.t1 | Q1H5E9 | 79.9 | 273 | 51 | 1 | 1 | 269 | 112 | 384 | 1.6e-117 | 423.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56721.t1 | G7I294 | 97.8 | 269 | 6 | 0 | 1 | 269 | 110 | 378 | 3.8e-144 | 520.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051171 | MS.gene56721 | 0.812958 | 3.26E-51 | -1.69E-46 |
| MS.gene053330 | MS.gene56721 | 0.801851 | 7.41E-49 | -1.69E-46 |
| MS.gene053971 | MS.gene56721 | 0.829373 | 5.34E-55 | -1.69E-46 |
| MS.gene055370 | MS.gene56721 | 0.849625 | 2.87E-60 | -1.69E-46 |
| MS.gene056633 | MS.gene56721 | 0.812536 | 4.03E-51 | -1.69E-46 |
| MS.gene058276 | MS.gene56721 | 0.817394 | 3.37E-52 | -1.69E-46 |
| MS.gene058746 | MS.gene56721 | 0.813795 | 2.14E-51 | -1.69E-46 |
| MS.gene059492 | MS.gene56721 | 0.825791 | 3.87E-54 | -1.69E-46 |
| MS.gene059494 | MS.gene56721 | 0.883817 | 3.25E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56721.t1 | MTR_1g007490 | 97.048 | 271 | 8 | 0 | 1 | 271 | 110 | 380 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56721.t1 | AT5G48470 | 79.273 | 275 | 53 | 1 | 1 | 271 | 112 | 386 | 1.32e-157 | 445 |
Find 0 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGCATAAAATTAGAAAT+AGG | - | 10764:7629-7648 | None:intergenic | 15.0% |
| !! | AATCTATTACAATCTACATT+TGG | + | 10764:5775-5794 | MS.gene56721:intron | 20.0% |
| !! | AGATTGTAATAGATTATAGT+TGG | - | 10764:5770-5789 | None:intergenic | 20.0% |
| !! | ATATTTATCACTCAATTGAA+AGG | - | 10764:6510-6529 | None:intergenic | 20.0% |
| !! | CCATATAATTGTAAAATACT+TGG | + | 10764:7294-7313 | MS.gene56721:intron | 20.0% |
| !! | GTTATCAAAATAAAACAGTT+TGG | - | 10764:7350-7369 | None:intergenic | 20.0% |
| !!! | AAAAATAGAAAAGTATCAAC+TGG | - | 10764:7464-7483 | None:intergenic | 20.0% |
| !!! | CCAAGTATTTTACAATTATA+TGG | - | 10764:7297-7316 | None:intergenic | 20.0% |
| !!! | TGTGTAGATTTAAAACTAAA+TGG | + | 10764:6837-6856 | MS.gene56721:intron | 20.0% |
| ! | AATAGAAACATTTGTGGATT+TGG | - | 10764:7572-7591 | None:intergenic | 25.0% |
| ! | ACCATTCATCATAAAAACTA+TGG | - | 10764:7246-7265 | None:intergenic | 25.0% |
| ! | AGTTGAAAATTTCACTCTAT+TGG | + | 10764:7320-7339 | MS.gene56721:intron | 25.0% |
| ! | ATATATCAAGAACTGAGTAT+GGG | - | 10764:7378-7397 | None:intergenic | 25.0% |
| ! | GATTAATTGTTTACAGACAA+TGG | + | 10764:6583-6602 | MS.gene56721:intron | 25.0% |
| ! | GTTGAAAATTTCACTCTATT+GGG | + | 10764:7321-7340 | MS.gene56721:intron | 25.0% |
| ! | TACAATTATATGGAATTCTC+AGG | - | 10764:7287-7306 | None:intergenic | 25.0% |
| ! | TAGAAATAGGTATTTATGAC+AGG | - | 10764:7616-7635 | None:intergenic | 25.0% |
| ! | TATATATCAAGAACTGAGTA+TGG | - | 10764:7379-7398 | None:intergenic | 25.0% |
| ! | TGTATGATAGAGTAATAATC+AGG | - | 10764:7403-7422 | None:intergenic | 25.0% |
| ! | TTAAACAACTGTATGAATGA+AGG | - | 10764:6280-6299 | None:intergenic | 25.0% |
| ! | TTCGAATGAAAAACAAAGTT+TGG | + | 10764:7905-7924 | MS.gene56721:intron | 25.0% |
| ! | TTGAAAATTTCACTCTATTG+GGG | + | 10764:7322-7341 | MS.gene56721:intron | 25.0% |
| ! | TTTGGAAATAGAAACATTTG+TGG | - | 10764:7578-7597 | None:intergenic | 25.0% |
| !!! | ATCTTTTAGGTTCAAGTAAT+TGG | + | 10764:6057-6076 | MS.gene56721:intron | 25.0% |
| !!! | ATTTTGTCGTTTGTGTTAAA+AGG | + | 10764:6792-6811 | MS.gene56721:intron | 25.0% |
| !!! | TGGCTTGTTACTTTATAATA+TGG | - | 10764:7949-7968 | None:intergenic | 25.0% |
| !!! | TTTTGTCGTTTGTGTTAAAA+GGG | + | 10764:6793-6812 | MS.gene56721:intron | 25.0% |
| AAGGATAGAAAAAGTTAACC+AGG | - | 10764:6491-6510 | None:intergenic | 30.0% | |
| ACCGATATTTAATTAGCTCA+CGG | + | 10764:7702-7721 | MS.gene56721:intron | 30.0% | |
| ACTTGAACCTAAAAGATGAA+GGG | - | 10764:6054-6073 | None:intergenic | 30.0% | |
| AGTGGATCATGATGATTTAA+TGG | - | 10764:7969-7988 | None:intergenic | 30.0% | |
| ATATTTAATTAGCTCACGGA+AGG | + | 10764:7706-7725 | MS.gene56721:intron | 30.0% | |
| ATCGAAATATATGCACAGTT+AGG | - | 10764:5876-5895 | None:intergenic | 30.0% | |
| ATGATAAGAAATGTGATGCT+CGG | + | 10764:6969-6988 | MS.gene56721:CDS | 30.0% | |
| ATTATTAAGCTTGGTCTGTT+AGG | - | 10764:5830-5849 | None:intergenic | 30.0% | |
| GAACTTCTTAACTAAATTGG+TGG | + | 10764:6917-6936 | MS.gene56721:CDS | 30.0% | |
| GGTGAACTTCTTAACTAAAT+TGG | + | 10764:6914-6933 | MS.gene56721:intron | 30.0% | |
| GTCGCAAAAAAATATGCTTT+CGG | + | 10764:6866-6885 | MS.gene56721:intron | 30.0% | |
| TACTTGAACCTAAAAGATGA+AGG | - | 10764:6055-6074 | None:intergenic | 30.0% | |
| TCCGTGAGCTAATTAAATAT+CGG | - | 10764:7706-7725 | None:intergenic | 30.0% | |
| TGGTATACAACATTACAACT+TGG | - | 10764:6019-6038 | None:intergenic | 30.0% | |
| TTAAAAATCATAAGAGACGC+AGG | - | 10764:7830-7849 | None:intergenic | 30.0% | |
| TTATTAAGCTTGGTCTGTTA+GGG | - | 10764:5829-5848 | None:intergenic | 30.0% | |
| ! | AACAGTGTTTAAAATTCACG+TGG | - | 10764:6562-6581 | None:intergenic | 30.0% |
| ! | AGGTTGTATGCACATTATTT+TGG | - | 10764:7596-7615 | None:intergenic | 30.0% |
| ! | GCCATAGTTTTTATGATGAA+TGG | + | 10764:7242-7261 | MS.gene56721:intron | 30.0% |
| ! | TCATATCTGCTTTCCTTTTT+GGG | - | 10764:6099-6118 | None:intergenic | 30.0% |
| ! | TTCATATCTGCTTTCCTTTT+TGG | - | 10764:6100-6119 | None:intergenic | 30.0% |
| !!! | GATACTTTTCTATTTTTGCC+AGG | + | 10764:7467-7486 | MS.gene56721:intron | 30.0% |
| AAAAGACAGAAGTCATTCAG+TGG | - | 10764:7987-8006 | None:intergenic | 35.0% | |
| AAGGTCGATCATGTAATCAA+GGG | - | 10764:5643-5662 | None:intergenic | 35.0% | |
| ACTTCTATCAAGTTCTGTAG+AGG | + | 10764:6323-6342 | MS.gene56721:intron | 35.0% | |
| ACTTGAAGATTCATATCCCA+GGG | + | 10764:6169-6188 | MS.gene56721:CDS | 35.0% | |
| ATATATGCTGGATCTGACAA+TGG | + | 10764:7501-7520 | MS.gene56721:CDS | 35.0% | |
| CTATATCTGAATTCTTGCCA+AGG | + | 10764:6533-6552 | MS.gene56721:intron | 35.0% | |
| CTTAAAGAAGTTCCTTACCT+GGG | - | 10764:5967-5986 | None:intergenic | 35.0% | |
| GAATTTACACCTTATCATCC+TGG | - | 10764:5677-5696 | None:intergenic | 35.0% | |
| GAGGTAGAGTATATAATCCA+CGG | - | 10764:6715-6734 | None:intergenic | 35.0% | |
| TAAAATTCACGTGGTTTCCT+TGG | - | 10764:6553-6572 | None:intergenic | 35.0% | |
| TAGAGGTTCTCAATATTGGA+GGG | + | 10764:6340-6359 | MS.gene56721:intron | 35.0% | |
| TCGTTTGTGTTAAAAGGGAT+TGG | + | 10764:6798-6817 | MS.gene56721:intron | 35.0% | |
| TCTAAATGACATAGCTAACC+AGG | + | 10764:6197-6216 | MS.gene56721:CDS | 35.0% | |
| TCTATGTAGAACTCCCAAAA+AGG | + | 10764:6083-6102 | MS.gene56721:CDS | 35.0% | |
| TCTGTAGAGGTTCTCAATAT+TGG | + | 10764:6336-6355 | MS.gene56721:intron | 35.0% | |
| TGAGTTGCGATTATTAAGCT+TGG | - | 10764:5839-5858 | None:intergenic | 35.0% | |
| TGGATTATATACTCTACCTC+CGG | + | 10764:6715-6734 | MS.gene56721:CDS | 35.0% | |
| TTAAAGAAGTTCCTTACCTG+GGG | - | 10764:5966-5985 | None:intergenic | 35.0% | |
| TTCGGCATCATTAAAACTGT+TGG | + | 10764:6884-6903 | MS.gene56721:intron | 35.0% | |
| ! | ATTTTCCTCTAGGTACAAGT+TGG | - | 10764:7871-7890 | None:intergenic | 35.0% |
| ! | TCAAAACTGCATTTTCCTCT+AGG | - | 10764:7881-7900 | None:intergenic | 35.0% |
| !! | TCAGAAAAGTGTTTGAGAAG+TGG | - | 10764:5990-6009 | None:intergenic | 35.0% |
| AAAGACACTTCAAGTCCTTC+AGG | + | 10764:8036-8055 | MS.gene56721:CDS | 40.0% | |
| ACACTCCATTCCATTTGGAA+AGG | + | 10764:5741-5760 | MS.gene56721:intron | 40.0% | |
| ACTTGTCTGTCATGATATCC+AGG | + | 10764:7144-7163 | MS.gene56721:intron | 40.0% | |
| AGAATCTGAGAAAGTAGCAG+TGG | + | 10764:5554-5573 | MS.gene56721:CDS | 40.0% | |
| ATCAAGGGCCATCATGAAAT+CGG | - | 10764:5628-5647 | None:intergenic | 40.0% | |
| ATTAAAACTGTTGGCAGTGC+AGG | + | 10764:6893-6912 | MS.gene56721:intron | 40.0% | |
| CAAAACCAACTTGTACCTAG+AGG | + | 10764:7863-7882 | MS.gene56721:intron | 40.0% | |
| CAAGGTCGATCATGTAATCA+AGG | - | 10764:5644-5663 | None:intergenic | 40.0% | |
| CATATATACCAGACAAGACC+TGG | - | 10764:7488-7507 | None:intergenic | 40.0% | |
| CCAGGCTGATGATTTATTAG+AGG | + | 10764:6215-6234 | MS.gene56721:CDS | 40.0% | |
| CCTCTAATAAATCATCAGCC+TGG | - | 10764:6218-6237 | None:intergenic | 40.0% | |
| CTTGAAGATTCATATCCCAG+GGG | + | 10764:6170-6189 | MS.gene56721:CDS | 40.0% | |
| GACTTGAAGATTCATATCCC+AGG | + | 10764:6168-6187 | MS.gene56721:CDS | 40.0% | |
| GATATTGCACTTGAAAGACG+CGG | - | 10764:6428-6447 | None:intergenic | 40.0% | |
| GATGGAATCCGATTTCATGA+TGG | + | 10764:5617-5636 | MS.gene56721:CDS | 40.0% | |
| GCTTAAAGAAGTTCCTTACC+TGG | - | 10764:5968-5987 | None:intergenic | 40.0% | |
| GTAGAGGTTCTCAATATTGG+AGG | + | 10764:6339-6358 | MS.gene56721:intron | 40.0% | |
| GTCTTGTCTGGTATATATGC+TGG | + | 10764:7489-7508 | MS.gene56721:CDS | 40.0% | |
| GTTTCTCGAAACAGTCTCTA+AGG | + | 10764:7210-7229 | MS.gene56721:CDS | 40.0% | |
| TAGTTGGAGACCTTTCCAAA+TGG | - | 10764:5754-5773 | None:intergenic | 40.0% | |
| TGAACCTAAAAGATGAAGGG+AGG | - | 10764:6051-6070 | None:intergenic | 40.0% | |
| TTGGATGAAAGAAATGACCG+TGG | + | 10764:6695-6714 | MS.gene56721:CDS | 40.0% | |
| TTTCCAAATGGAATGGAGTG+TGG | - | 10764:5742-5761 | None:intergenic | 40.0% | |
| TTTGATGAACCTGCAAGCAA+AGG | - | 10764:8018-8037 | None:intergenic | 40.0% | |
| ! | AAATTGGTGGCCTTAAAACC+TGG | + | 10764:6930-6949 | MS.gene56721:CDS | 40.0% |
| ! | AACTCCTCCCTTCATCTTTT+AGG | + | 10764:6044-6063 | MS.gene56721:intron | 40.0% |
| ! | AATTGGTGGCCTTAAAACCT+GGG | + | 10764:6931-6950 | MS.gene56721:CDS | 40.0% |
| ! | ATGTCATTTAGATTTGCCCC+TGG | - | 10764:6189-6208 | None:intergenic | 40.0% |
| ! | CACAACTTTCCCAGGTTTTA+AGG | - | 10764:6943-6962 | None:intergenic | 40.0% |
| ! | TGGTAAGAGAGTTGATCAGA+TGG | + | 10764:5599-5618 | MS.gene56721:CDS | 40.0% |
| ! | TGTCATTTAGATTTGCCCCT+GGG | - | 10764:6188-6207 | None:intergenic | 40.0% |
| !! | CAGAAGCTTTCTAAAATGCC+TGG | + | 10764:6470-6489 | MS.gene56721:intron | 40.0% |
| !! | CAGGCATTTTAGAAAGCTTC+TGG | - | 10764:6472-6491 | None:intergenic | 40.0% |
| !! | TATTTTTGCCAGGTCTTGTC+TGG | + | 10764:7477-7496 | MS.gene56721:intron | 40.0% |
| !! | TTCAGTAGGATTTGCTGGAA+GGG | + | 10764:7040-7059 | MS.gene56721:CDS | 40.0% |
| !! | TTTCAGTAGGATTTGCTGGA+AGG | + | 10764:7039-7058 | MS.gene56721:CDS | 40.0% |
| !!! | CTCTAGGTACAAGTTGGTTT+TGG | - | 10764:7865-7884 | None:intergenic | 40.0% |
| !!! | TAGGTACAAGTTGGTTTTGG+TGG | - | 10764:7862-7881 | None:intergenic | 40.0% |
| AAAACCTGGGAAAGTTGTGC+TGG | + | 10764:6944-6963 | MS.gene56721:CDS | 45.0% | |
| AACTAAAAAATGCCCACCCC+AGG | + | 10764:5947-5966 | MS.gene56721:CDS | 45.0% | |
| ACTGTTTCGAGAAACATGCC+CGG | - | 10764:7205-7224 | None:intergenic | 45.0% | |
| AGAAGAAGCCCGTGATATGA+TGG | + | 10764:6661-6680 | MS.gene56721:CDS | 45.0% | |
| AGGGTTTCAGTAGGATTTGC+TGG | + | 10764:7035-7054 | MS.gene56721:CDS | 45.0% | |
| ATATCCAGCACAACTTTCCC+AGG | - | 10764:6951-6970 | None:intergenic | 45.0% | |
| ATGAAGGGAGGAGTTCACAT+TGG | - | 10764:6039-6058 | None:intergenic | 45.0% | |
| CAGATCGAAAACTGCTTGCA+AGG | + | 10764:6624-6643 | MS.gene56721:CDS | 45.0% | |
| CATCCACACTCCATTCCATT+TGG | + | 10764:5736-5755 | MS.gene56721:intron | 45.0% | |
| GAAGAAGCCCGTGATATGAT+GGG | + | 10764:6662-6681 | MS.gene56721:CDS | 45.0% | |
| GATGATGACAGGGTTTCAGT+AGG | + | 10764:7026-7045 | MS.gene56721:CDS | 45.0% | |
| GGAGACCTTTCCAAATGGAA+TGG | - | 10764:5749-5768 | None:intergenic | 45.0% | |
| GTGATGCTCGGAAAAGATGA+AGG | + | 10764:6981-7000 | MS.gene56721:CDS | 45.0% | |
| TCACATCAACATACCTCAGC+CGG | - | 10764:6737-6756 | None:intergenic | 45.0% | |
| TCACTGCACAACATCTGGAA+TGG | + | 10764:7526-7545 | MS.gene56721:CDS | 45.0% | |
| TGAACCTGCAAGCAAAGGAA+AGG | - | 10764:8013-8032 | None:intergenic | 45.0% | |
| TGAGAAAGTAGCAGTGGAGT+TGG | + | 10764:5560-5579 | MS.gene56721:CDS | 45.0% | |
| TGAGAAGGACCAGGATGATA+AGG | + | 10764:5665-5684 | MS.gene56721:CDS | 45.0% | |
| TGGTATCACTGCACAACATC+TGG | + | 10764:7521-7540 | MS.gene56721:CDS | 45.0% | |
| TGTTCCTTTCCTTTGCTTGC+AGG | + | 10764:8006-8025 | MS.gene56721:intron | 45.0% | |
| TTAGCTCACGGAAGGTAACT+AGG | + | 10764:7714-7733 | MS.gene56721:intron | 45.0% | |
| TTGGCTGCACAAGGAGTTAT+TGG | + | 10764:5579-5598 | MS.gene56721:CDS | 45.0% | |
| ! | AGTTTTCGATCTGGCACAAC+AGG | - | 10764:6617-6636 | None:intergenic | 45.0% |
| ! | CACTGCACAACATCTGGAAT+GGG | + | 10764:7527-7546 | MS.gene56721:CDS | 45.0% |
| ! | CTTGCAAGCAGTTTTCGATC+TGG | - | 10764:6626-6645 | None:intergenic | 45.0% |
| ! | TCAACTGGAAGTGCAAACAC+AGG | - | 10764:7449-7468 | None:intergenic | 45.0% |
| ! | TGGCAACGATGATGATGACA+GGG | + | 10764:7016-7035 | MS.gene56721:CDS | 45.0% |
| !! | GCTGGTGGCGGTTTATTTAA+AGG | + | 10764:6138-6157 | MS.gene56721:CDS | 45.0% |
| AAAAATGCCCACCCCAGGTA+AGG | + | 10764:5952-5971 | MS.gene56721:intron | 50.0% | |
| AAGAAGTTCCTTACCTGGGG+TGG | - | 10764:5963-5982 | None:intergenic | 50.0% | |
| AGAAGTTCCTTACCTGGGGT+GGG | - | 10764:5962-5981 | None:intergenic | 50.0% | |
| AGTGCAAACACAGGCAGAGA+AGG | - | 10764:7440-7459 | None:intergenic | 50.0% | |
| ATATACTCTACCTCCGGCTG+AGG | + | 10764:6721-6740 | MS.gene56721:CDS | 50.0% | |
| ATCGCAACTCACACACATGC+TGG | + | 10764:5848-5867 | MS.gene56721:intron | 50.0% | |
| CATGATCGACCTTGCTGAGA+AGG | + | 10764:5650-5669 | MS.gene56721:CDS | 50.0% | |
| CTGTTTCGAGAAACATGCCC+GGG | - | 10764:7204-7223 | None:intergenic | 50.0% | |
| GATATCCAGGCAAGTGTGAC+AGG | + | 10764:7157-7176 | MS.gene56721:intron | 50.0% | |
| GTGAGTCGAATTGGATGACG+TGG | + | 10764:7062-7081 | MS.gene56721:intron | 50.0% | |
| TCGCAACTCACACACATGCT+GGG | + | 10764:5849-5868 | MS.gene56721:intron | 50.0% | |
| ! | AAGCCCGTGATATGATGGGA+GGG | + | 10764:6666-6685 | MS.gene56721:CDS | 50.0% |
| ! | CTGGCAACGATGATGATGAC+AGG | + | 10764:7015-7034 | MS.gene56721:CDS | 50.0% |
| ! | GATGAAGGTGCAGACAACAC+TGG | + | 10764:6996-7015 | MS.gene56721:CDS | 50.0% |
| !! | TATGATGGGAGGGGGGATTT+TGG | + | 10764:6676-6695 | MS.gene56721:CDS | 50.0% |
| !!! | AGTTGGTTTTGGTGGCAACG+TGG | - | 10764:7854-7873 | None:intergenic | 50.0% |
| CATCAACATACCTCAGCCGG+AGG | - | 10764:6734-6753 | None:intergenic | 55.0% | |
| CATCCTGGTCCTTCTCAGCA+AGG | - | 10764:5662-5681 | None:intergenic | 55.0% | |
| GATGCAGCGCAAGTCACTGT+TGG | + | 10764:5893-5912 | MS.gene56721:intron | 55.0% | |
| GCTGGAAGGGTGAGTCGAAT+TGG | + | 10764:7053-7072 | MS.gene56721:intron | 55.0% | |
| TCCAGGCAAGTGTGACAGGA+CGG | + | 10764:7161-7180 | MS.gene56721:intron | 55.0% | |
| TCCCCCCTCCCATCATATCA+CGG | - | 10764:6673-6692 | None:intergenic | 55.0% | |
| TTGTTACGCCGAGTTGCAGC+TGG | + | 10764:6120-6139 | MS.gene56721:CDS | 55.0% | |
| ! | AGCCCGTGATATGATGGGAG+GGG | + | 10764:6667-6686 | MS.gene56721:CDS | 55.0% |
| ! | GAAGCCCGTGATATGATGGG+AGG | + | 10764:6665-6684 | MS.gene56721:CDS | 55.0% |
| AACCGCCACCAGCTGCAACT+CGG | - | 10764:6131-6150 | None:intergenic | 60.0% | |
| AGAAACATGCCCGGGCGTAC+GGG | - | 10764:7196-7215 | None:intergenic | 60.0% | |
| CCCCCCTCCCATCATATCAC+GGG | - | 10764:6672-6691 | None:intergenic | 60.0% | |
| CGACCTTGCTGAGAAGGACC+AGG | + | 10764:5656-5675 | MS.gene56721:CDS | 60.0% | |
| GAGAAACATGCCCGGGCGTA+CGG | - | 10764:7197-7216 | None:intergenic | 60.0% | |
| GCAGTGGAGTTGGCTGCACA+AGG | + | 10764:5570-5589 | MS.gene56721:CDS | 60.0% | |
| TCCGTCCTGTCACACTTGCC+TGG | - | 10764:7165-7184 | None:intergenic | 60.0% | |
| TTACGCCGAGTTGCAGCTGG+TGG | + | 10764:6123-6142 | MS.gene56721:CDS | 60.0% | |
| ! | CCCGTGATATGATGGGAGGG+GGG | + | 10764:6669-6688 | MS.gene56721:CDS | 60.0% |
| ! | GCCCGTGATATGATGGGAGG+GGG | + | 10764:6668-6687 | MS.gene56721:CDS | 60.0% |
| AAGCCACATCCCGTACGCCC+GGG | + | 10764:7184-7203 | MS.gene56721:CDS | 65.0% | |
| GAAGCCACATCCCGTACGCC+CGG | + | 10764:7183-7202 | MS.gene56721:CDS | 65.0% | |
| ATGCCCGGGCGTACGGGATG+TGG | - | 10764:7190-7209 | None:intergenic | 70.0% | |
| CGCCGAGTTGCAGCTGGTGG+CGG | + | 10764:6126-6145 | MS.gene56721:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10764 | gene | 5540 | 8071 | 5540 | ID=MS.gene56721 |
| 10764 | mRNA | 5540 | 8071 | 5540 | ID=MS.gene56721.t1;Parent=MS.gene56721 |
| 10764 | exon | 5540 | 5686 | 5540 | ID=MS.gene56721.t1.exon1;Parent=MS.gene56721.t1 |
| 10764 | CDS | 5540 | 5686 | 5540 | ID=cds.MS.gene56721.t1;Parent=MS.gene56721.t1 |
| 10764 | exon | 5900 | 5968 | 5900 | ID=MS.gene56721.t1.exon2;Parent=MS.gene56721.t1 |
| 10764 | CDS | 5900 | 5968 | 5900 | ID=cds.MS.gene56721.t1;Parent=MS.gene56721.t1 |
| 10764 | exon | 6066 | 6236 | 6066 | ID=MS.gene56721.t1.exon3;Parent=MS.gene56721.t1 |
| 10764 | CDS | 6066 | 6236 | 6066 | ID=cds.MS.gene56721.t1;Parent=MS.gene56721.t1 |
| 10764 | exon | 6599 | 6742 | 6599 | ID=MS.gene56721.t1.exon4;Parent=MS.gene56721.t1 |
| 10764 | CDS | 6599 | 6742 | 6599 | ID=cds.MS.gene56721.t1;Parent=MS.gene56721.t1 |
| 10764 | exon | 6915 | 7061 | 6915 | ID=MS.gene56721.t1.exon5;Parent=MS.gene56721.t1 |
| 10764 | CDS | 6915 | 7061 | 6915 | ID=cds.MS.gene56721.t1;Parent=MS.gene56721.t1 |
| 10764 | exon | 7166 | 7231 | 7166 | ID=MS.gene56721.t1.exon6;Parent=MS.gene56721.t1 |
| 10764 | CDS | 7166 | 7231 | 7166 | ID=cds.MS.gene56721.t1;Parent=MS.gene56721.t1 |
| 10764 | exon | 7489 | 7548 | 7489 | ID=MS.gene56721.t1.exon7;Parent=MS.gene56721.t1 |
| 10764 | CDS | 7489 | 7548 | 7489 | ID=cds.MS.gene56721.t1;Parent=MS.gene56721.t1 |
| 10764 | exon | 7718 | 7727 | 7718 | ID=MS.gene56721.t1.exon8;Parent=MS.gene56721.t1 |
| 10764 | CDS | 7718 | 7727 | 7718 | ID=cds.MS.gene56721.t1;Parent=MS.gene56721.t1 |
| 10764 | exon | 8028 | 8071 | 8028 | ID=MS.gene56721.t1.exon9;Parent=MS.gene56721.t1 |
| 10764 | CDS | 8028 | 8071 | 8028 | ID=cds.MS.gene56721.t1;Parent=MS.gene56721.t1 |
| Gene Sequence |
| Protein sequence |
