Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57961.t1 | XP_013458563.1 | 99.8 | 404 | 1 | 0 | 1 | 404 | 1 | 404 | 1.40E-230 | 808.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57961.t1 | Q9M0B6 | 85.5 | 399 | 54 | 1 | 6 | 404 | 3 | 397 | 3.1e-202 | 705.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57961.t1 | A0A072US06 | 99.8 | 404 | 1 | 0 | 1 | 404 | 1 | 404 | 1.0e-230 | 808.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055478 | MS.gene57961 | 0.980505 | 2.25E-150 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57961 | MS.gene99045 | PPI |
| MS.gene57961 | MS.gene50266 | PPI |
| MS.gene57961 | MS.gene48984 | PPI |
| MS.gene57961 | MS.gene066580 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57961.t1 | MTR_4g129820 | 99.752 | 404 | 1 | 0 | 1 | 404 | 1 | 404 | 0.0 | 833 |
| MS.gene57961.t1 | MTR_4g024600 | 67.241 | 406 | 123 | 4 | 6 | 404 | 8 | 410 | 0.0 | 547 |
| MS.gene57961.t1 | MTR_0354s0040 | 67.254 | 397 | 116 | 4 | 13 | 404 | 4 | 391 | 0.0 | 543 |
| MS.gene57961.t1 | MTR_4g102270 | 60.911 | 417 | 149 | 4 | 4 | 412 | 2 | 412 | 0.0 | 513 |
| MS.gene57961.t1 | MTR_3g084090 | 64.444 | 405 | 130 | 5 | 13 | 404 | 5 | 408 | 0.0 | 512 |
| MS.gene57961.t1 | MTR_5g011940 | 71.257 | 334 | 94 | 1 | 73 | 404 | 66 | 399 | 2.18e-174 | 494 |
| MS.gene57961.t1 | MTR_2g032100 | 26.549 | 339 | 216 | 10 | 89 | 409 | 65 | 388 | 3.22e-22 | 98.2 |
| MS.gene57961.t1 | MTR_2g073240 | 30.962 | 239 | 143 | 5 | 96 | 324 | 20 | 246 | 3.45e-21 | 96.3 |
| MS.gene57961.t1 | MTR_0034s0060 | 31.330 | 233 | 150 | 5 | 96 | 324 | 138 | 364 | 4.73e-21 | 96.3 |
| MS.gene57961.t1 | MTR_2g032100 | 30.612 | 196 | 132 | 3 | 89 | 282 | 65 | 258 | 3.08e-20 | 90.9 |
| MS.gene57961.t1 | MTR_8g099535 | 28.358 | 335 | 190 | 14 | 96 | 403 | 5 | 316 | 3.80e-20 | 91.3 |
| MS.gene57961.t1 | MTR_1g009600 | 26.351 | 296 | 181 | 7 | 96 | 380 | 6 | 275 | 6.12e-19 | 89.4 |
| MS.gene57961.t1 | MTR_5g009170 | 27.523 | 327 | 203 | 12 | 96 | 403 | 48 | 359 | 6.72e-19 | 88.2 |
| MS.gene57961.t1 | MTR_8g089180 | 25.749 | 334 | 211 | 11 | 90 | 403 | 66 | 382 | 2.12e-17 | 84.0 |
| MS.gene57961.t1 | MTR_8g089180 | 25.749 | 334 | 211 | 11 | 90 | 403 | 66 | 382 | 2.12e-17 | 84.0 |
| MS.gene57961.t1 | MTR_4g063600 | 26.846 | 298 | 181 | 11 | 92 | 382 | 29 | 296 | 1.00e-16 | 81.3 |
| MS.gene57961.t1 | MTR_5g009160 | 26.586 | 331 | 201 | 13 | 96 | 403 | 5 | 316 | 1.15e-16 | 81.3 |
| MS.gene57961.t1 | MTR_1g088480 | 26.923 | 338 | 192 | 15 | 84 | 404 | 98 | 397 | 2.91e-16 | 80.5 |
| MS.gene57961.t1 | MTR_8g096880 | 34.356 | 163 | 101 | 4 | 97 | 256 | 8 | 167 | 9.27e-16 | 77.8 |
| MS.gene57961.t1 | MTR_8g096880 | 26.586 | 331 | 203 | 12 | 97 | 404 | 8 | 321 | 1.08e-15 | 77.8 |
| MS.gene57961.t1 | MTR_8g096880 | 26.586 | 331 | 203 | 12 | 97 | 404 | 8 | 321 | 1.12e-15 | 78.2 |
| MS.gene57961.t1 | MTR_4g063600 | 27.181 | 298 | 177 | 12 | 92 | 382 | 29 | 293 | 2.79e-15 | 77.0 |
| MS.gene57961.t1 | MTR_4g120030 | 24.474 | 380 | 224 | 15 | 27 | 384 | 37 | 375 | 6.64e-15 | 76.6 |
| MS.gene57961.t1 | MTR_4g134490 | 24.857 | 350 | 225 | 11 | 79 | 407 | 11 | 343 | 7.71e-15 | 75.9 |
| MS.gene57961.t1 | MTR_4g134490 | 24.784 | 347 | 223 | 11 | 79 | 404 | 11 | 340 | 8.15e-15 | 75.9 |
| MS.gene57961.t1 | MTR_7g115080 | 25.926 | 243 | 154 | 8 | 95 | 326 | 29 | 256 | 2.22e-11 | 65.5 |
| MS.gene57961.t1 | MTR_7g115080 | 25.926 | 243 | 154 | 8 | 95 | 326 | 63 | 290 | 2.83e-11 | 65.1 |
| MS.gene57961.t1 | MTR_7g115080 | 25.926 | 243 | 154 | 8 | 95 | 326 | 42 | 269 | 3.15e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57961.t1 | AT4G30440 | 85.464 | 399 | 54 | 1 | 6 | 404 | 3 | 397 | 0.0 | 701 |
| MS.gene57961.t1 | AT1G02000 | 68.812 | 404 | 118 | 5 | 5 | 404 | 2 | 401 | 0.0 | 557 |
| MS.gene57961.t1 | AT4G00110 | 68.127 | 411 | 113 | 5 | 1 | 404 | 1 | 400 | 0.0 | 553 |
| MS.gene57961.t1 | AT2G45310 | 65.777 | 412 | 122 | 5 | 5 | 404 | 2 | 406 | 0.0 | 530 |
| MS.gene57961.t1 | AT3G23820 | 72.424 | 330 | 91 | 0 | 75 | 404 | 92 | 421 | 3.24e-179 | 507 |
| MS.gene57961.t1 | AT4G12250 | 65.281 | 409 | 128 | 4 | 5 | 404 | 2 | 405 | 1.39e-177 | 502 |
| MS.gene57961.t1 | AT4G23920 | 29.851 | 335 | 185 | 13 | 96 | 403 | 4 | 315 | 1.46e-22 | 98.6 |
| MS.gene57961.t1 | AT3G14790 | 31.330 | 233 | 150 | 5 | 96 | 324 | 8 | 234 | 4.36e-21 | 96.3 |
| MS.gene57961.t1 | AT3G14790 | 31.330 | 233 | 150 | 5 | 96 | 324 | 11 | 237 | 4.42e-21 | 96.3 |
| MS.gene57961.t1 | AT1G53500 | 30.901 | 233 | 151 | 5 | 96 | 324 | 10 | 236 | 1.76e-20 | 94.4 |
| MS.gene57961.t1 | AT1G78570 | 30.472 | 233 | 152 | 5 | 96 | 324 | 8 | 234 | 4.36e-20 | 93.2 |
| MS.gene57961.t1 | AT1G30620 | 25.602 | 332 | 214 | 10 | 90 | 403 | 65 | 381 | 2.32e-19 | 89.7 |
| MS.gene57961.t1 | AT1G30620 | 25.602 | 332 | 214 | 10 | 90 | 403 | 66 | 382 | 2.64e-19 | 89.7 |
| MS.gene57961.t1 | AT1G30620 | 25.602 | 332 | 214 | 10 | 90 | 403 | 66 | 382 | 2.64e-19 | 89.7 |
| MS.gene57961.t1 | AT1G30620 | 25.602 | 332 | 214 | 10 | 90 | 403 | 66 | 382 | 2.64e-19 | 89.7 |
| MS.gene57961.t1 | AT1G30620 | 25.602 | 332 | 214 | 10 | 90 | 403 | 66 | 382 | 2.64e-19 | 89.7 |
| MS.gene57961.t1 | AT4G10960 | 29.042 | 334 | 189 | 15 | 96 | 403 | 5 | 316 | 4.32e-19 | 88.2 |
| MS.gene57961.t1 | AT1G30620 | 29.744 | 195 | 133 | 3 | 90 | 282 | 66 | 258 | 1.58e-18 | 85.9 |
| MS.gene57961.t1 | AT5G44480 | 27.692 | 260 | 167 | 7 | 91 | 332 | 67 | 323 | 1.90e-18 | 87.0 |
| MS.gene57961.t1 | AT5G44480 | 27.692 | 260 | 167 | 7 | 91 | 332 | 67 | 323 | 1.90e-18 | 87.0 |
| MS.gene57961.t1 | AT5G44480 | 27.692 | 260 | 167 | 7 | 91 | 332 | 67 | 323 | 1.90e-18 | 87.0 |
| MS.gene57961.t1 | AT5G44480 | 27.692 | 260 | 167 | 7 | 91 | 332 | 91 | 347 | 1.99e-18 | 87.4 |
| MS.gene57961.t1 | AT1G12780 | 27.327 | 333 | 200 | 13 | 96 | 404 | 8 | 322 | 8.06e-18 | 84.7 |
| MS.gene57961.t1 | AT4G20460 | 27.969 | 261 | 165 | 8 | 91 | 332 | 66 | 322 | 1.42e-17 | 84.3 |
| MS.gene57961.t1 | AT2G28760 | 27.632 | 304 | 179 | 12 | 92 | 384 | 28 | 301 | 1.66e-17 | 83.6 |
| MS.gene57961.t1 | AT2G28760 | 27.632 | 304 | 179 | 12 | 92 | 384 | 28 | 301 | 1.66e-17 | 83.6 |
| MS.gene57961.t1 | AT2G28760 | 27.632 | 304 | 179 | 12 | 92 | 384 | 28 | 301 | 1.66e-17 | 83.6 |
| MS.gene57961.t1 | AT3G62830 | 26.708 | 322 | 195 | 12 | 91 | 404 | 115 | 403 | 2.76e-17 | 84.0 |
| MS.gene57961.t1 | AT3G62830 | 26.708 | 322 | 195 | 12 | 91 | 404 | 115 | 403 | 2.76e-17 | 84.0 |
| MS.gene57961.t1 | AT2G28760 | 27.632 | 304 | 179 | 12 | 92 | 384 | 59 | 332 | 3.23e-17 | 83.2 |
| MS.gene57961.t1 | AT1G64440 | 26.254 | 339 | 204 | 11 | 96 | 409 | 4 | 321 | 6.34e-17 | 82.0 |
| MS.gene57961.t1 | AT1G63180 | 27.879 | 330 | 202 | 13 | 96 | 404 | 8 | 322 | 7.22e-17 | 81.6 |
| MS.gene57961.t1 | AT2G47650 | 26.171 | 363 | 204 | 15 | 65 | 404 | 84 | 405 | 1.35e-16 | 81.6 |
| MS.gene57961.t1 | AT3G53520 | 26.246 | 301 | 180 | 11 | 95 | 384 | 120 | 389 | 2.77e-16 | 80.9 |
| MS.gene57961.t1 | AT1G63180 | 28.231 | 294 | 180 | 11 | 96 | 370 | 8 | 289 | 4.50e-16 | 79.0 |
| MS.gene57961.t1 | AT3G53520 | 27.731 | 238 | 148 | 8 | 95 | 325 | 120 | 340 | 5.55e-15 | 76.3 |
| MS.gene57961.t1 | AT2G47650 | 25.994 | 327 | 189 | 14 | 95 | 404 | 121 | 411 | 1.11e-14 | 75.9 |
| MS.gene57961.t1 | AT3G53520 | 25.914 | 301 | 179 | 12 | 95 | 384 | 120 | 387 | 6.23e-14 | 73.6 |
| MS.gene57961.t1 | AT3G53520 | 27.572 | 243 | 150 | 9 | 95 | 330 | 120 | 343 | 2.97e-13 | 71.6 |
Find 107 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTTCAAGTTCGGTTTA+TGG | 0.210656 | 8.4:-5083995 | MS.gene57961:CDS |
| ATCCTCAACCGTCGATTGTT+TGG | 0.264214 | 8.4:-5084018 | MS.gene57961:CDS |
| CACACTTATAATCACATTTA+CGG | 0.269492 | 8.4:-5083878 | MS.gene57961:CDS |
| TCCTCAACCGTCGATTGTTT+GGG | 0.276207 | 8.4:-5084017 | MS.gene57961:CDS |
| GCCGGTATCTCTCCGCTTCA+TGG | 0.283731 | 8.4:-5084450 | MS.gene57961:CDS |
| ACCGGCGCAGCAGGTTTCAT+TGG | 0.292862 | 8.4:-5084352 | MS.gene57961:CDS |
| CGTCAGGTTCACCGTTGTTT+CGG | 0.306919 | 8.4:-5084562 | MS.gene57961:CDS |
| AATGCCATCATCATCATCTT+TGG | 0.333111 | 8.4:-5084650 | MS.gene57961:CDS |
| TTTCAAGGCGTCGTTGATTC+CGG | 0.335632 | 8.4:-5084475 | MS.gene57961:CDS |
| CGGTTTATCGGGGTAAGAAT+CGG | 0.338698 | 8.4:-5083748 | MS.gene57961:CDS |
| GTCTTTCAATCACTGGTTTA+CGG | 0.353235 | 8.4:-5083856 | MS.gene57961:CDS |
| ACCGTATCGGATCTTTAATC+TGG | 0.354061 | 8.4:-5083612 | MS.gene57961:CDS |
| TTCAAGCACCATGTTCTTGT+GGG | 0.364536 | 8.4:-5084536 | MS.gene57961:CDS |
| TTCACTAGAAATATGCTTCA+AGG | 0.375977 | 8.4:-5083782 | MS.gene57961:CDS |
| ACTTCGGCTAGAAGAGAATT+CGG | 0.384585 | 8.4:-5083461 | MS.gene57961:CDS |
| GCTTCAAGGAAAACCGATTA+CGG | 0.396931 | 8.4:-5083768 | MS.gene57961:CDS |
| TTACCCCGATAAACCGTAAT+CGG | 0.399655 | 8.4:+5083755 | None:intergenic |
| GTTGGATCATTGGATACTTC+GGG | 0.400108 | 8.4:-5083674 | MS.gene57961:CDS |
| GTTCTTGTCACCGGCGCAGC+AGG | 0.407852 | 8.4:-5084361 | MS.gene57961:CDS |
| CCGGCGCAGCAGGTTTCATT+GGG | 0.408918 | 8.4:-5084351 | MS.gene57961:CDS |
| GAAAACCGATTACGGTTTAT+CGG | 0.416082 | 8.4:-5083760 | MS.gene57961:CDS |
| TGTTTGGGCTTCTTCAAGTT+CGG | 0.422515 | 8.4:-5084002 | MS.gene57961:CDS |
| CCGGTATCTCTCCGCTTCAT+GGG | 0.427134 | 8.4:-5084449 | MS.gene57961:CDS |
| GGTTTATCGGGGTAAGAATC+GGG | 0.437179 | 8.4:-5083747 | MS.gene57961:CDS |
| CTTCAAGCACCATGTTCTTG+TGG | 0.437354 | 8.4:-5084537 | MS.gene57961:CDS |
| GAAGGGATGTGTTGGATCAT+TGG | 0.440266 | 8.4:-5083684 | MS.gene57961:CDS |
| CCCAATGAAACCTGCTGCGC+CGG | 0.445644 | 8.4:+5084351 | None:intergenic |
| AAAACCGATTACGGTTTATC+GGG | 0.446835 | 8.4:-5083759 | MS.gene57961:CDS |
| CTTCATGGGGTGGAATTCAA+TGG | 0.449305 | 8.4:-5084435 | MS.gene57961:CDS |
| TATACTTGAGCGACTCTTGA+AGG | 0.450751 | 8.4:-5083552 | MS.gene57961:CDS |
| CCCATGAAGCGGAGAGATAC+CGG | 0.457700 | 8.4:+5084449 | None:intergenic |
| CGGTTGATGCGATAAGCAAA+AGG | 0.460035 | 8.4:+5084512 | None:intergenic |
| ATCGGATCGGACCGATCAAC+CGG | 0.460933 | 8.4:-5083945 | MS.gene57961:CDS |
| GAACTGACATGCCGCCTTGA+CGG | 0.461870 | 8.4:+5084380 | None:intergenic |
| TGTTGGATCATTGGATACTT+CGG | 0.470042 | 8.4:-5083675 | MS.gene57961:CDS |
| AAGAATATTGTAGACATGCC+TGG | 0.472731 | 8.4:-5083518 | MS.gene57961:CDS |
| GTCCGATCCGATTCAGAAAA+CGG | 0.482746 | 8.4:+5083956 | None:intergenic |
| ATTTACGGTCTTTCAATCAC+TGG | 0.485594 | 8.4:-5083863 | MS.gene57961:CDS |
| GATACTTCGGGTAAGAGTAC+TGG | 0.490010 | 8.4:-5083662 | MS.gene57961:CDS |
| AAGGGAACATCACCATTTCC+AGG | 0.495063 | 8.4:+5083500 | None:intergenic |
| CTTCGGCTAGAAGAGAATTC+GGG | 0.501557 | 8.4:-5083460 | MS.gene57961:intron |
| TTTCACTGTTTATGGACCAT+GGG | 0.501706 | 8.4:-5083831 | MS.gene57961:CDS |
| ATTGTAGACATGCCTGGAAA+TGG | 0.502297 | 8.4:-5083512 | MS.gene57961:CDS |
| ATATAAACTCGCCGGTTGAT+CGG | 0.504741 | 8.4:+5083934 | None:intergenic |
| TTCATGGGGTGGAATTCAAT+GGG | 0.507931 | 8.4:-5084434 | MS.gene57961:CDS |
| TCTCTTGCTTTGAAAAGAAG+AGG | 0.508211 | 8.4:-5084319 | MS.gene57961:CDS |
| CCGTATCGGATCTTTAATCT+GGG | 0.514097 | 8.4:-5083611 | MS.gene57961:CDS |
| AACGTGGAGCAGCACCGTAT+CGG | 0.516784 | 8.4:-5083625 | MS.gene57961:CDS |
| ACAAGTGTCGGCACCGTCAC+CGG | 0.517543 | 8.4:+5083578 | None:intergenic |
| AGCGGAGAGATACCGGCTAC+CGG | 0.518013 | 8.4:+5084456 | None:intergenic |
| GGGGAATACTTCGCCGGTGA+CGG | 0.520167 | 8.4:-5083591 | MS.gene57961:CDS |
| CTTCACTATATCGTCAATGT+AGG | 0.520270 | 8.4:+5083703 | None:intergenic |
| AGAAGAGGTGATGGTGTCGT+TGG | 0.521236 | 8.4:-5084304 | MS.gene57961:CDS |
| CTGGAGTGGATGGGTAGAGT+TGG | 0.525095 | 8.4:+5084623 | None:intergenic |
| TAATCTGGGGAATACTTCGC+CGG | 0.527767 | 8.4:-5083597 | MS.gene57961:CDS |
| TCTTCTTGAAGCTTGCAAAA+CGG | 0.530117 | 8.4:-5084044 | MS.gene57961:CDS |
| TTGCTGTTAACATATGACAT+AGG | 0.539948 | 8.4:+5084085 | None:intergenic |
| CAACTCTACCCATCCACTCC+AGG | 0.542396 | 8.4:-5084622 | MS.gene57961:CDS |
| TTCAAGAAGAGTGACTAAAC+CGG | 0.543596 | 8.4:+5084057 | None:intergenic |
| TATCTCTCCGCTTCATGGGG+TGG | 0.546092 | 8.4:-5084445 | MS.gene57961:CDS |
| GCCCAAACAATCGACGGTTG+AGG | 0.547804 | 8.4:+5084016 | None:intergenic |
| GCGTCGTTGATTCCGGTAGC+CGG | 0.549486 | 8.4:-5084468 | MS.gene57961:CDS |
| GGTTGATGCGATAAGCAAAA+GGG | 0.551156 | 8.4:+5084513 | None:intergenic |
| GTGATATTCGCATGAGTGAA+GGG | 0.552540 | 8.4:+5083482 | None:intergenic |
| GATATAGTGAAGGGATGTGT+TGG | 0.556067 | 8.4:-5083692 | MS.gene57961:CDS |
| TTTCAAAGCAAGAGAAACAT+GGG | 0.556424 | 8.4:+5084327 | None:intergenic |
| CCACGGTCTAATGAACCGTC+AGG | 0.559363 | 8.4:-5084578 | MS.gene57961:CDS |
| GCCATGTCTGGTCTTCCCCA+TGG | 0.560372 | 8.4:+5083815 | None:intergenic |
| TCGGGTAAGAGTACTGGATC+GGG | 0.560620 | 8.4:-5083656 | MS.gene57961:CDS |
| TTCGGGTAAGAGTACTGGAT+CGG | 0.563210 | 8.4:-5083657 | MS.gene57961:CDS |
| GGTTTATGGTTTAAACGAGA+AGG | 0.563313 | 8.4:-5083981 | MS.gene57961:CDS |
| AGCTGGTGTGAGATACGCTA+TGG | 0.564884 | 8.4:-5084113 | MS.gene57961:CDS |
| ATGCATCTCGCAGCTCAAGC+TGG | 0.567280 | 8.4:-5084130 | MS.gene57961:CDS |
| GGCATGTCAGTTCTTGTCAC+CGG | 0.570857 | 8.4:-5084370 | MS.gene57961:CDS |
| TATGCAGCGACGAAGAAAGC+AGG | 0.574218 | 8.4:-5083914 | MS.gene57961:CDS |
| CAAAAGGGCCCACAAGAACA+TGG | 0.581018 | 8.4:+5084528 | None:intergenic |
| TTGAAAAGTGACGTAAGAAA+CGG | 0.582579 | 8.4:+5084492 | None:intergenic |
| GTCGCTGCATATAAACTCGC+CGG | 0.586523 | 8.4:+5083926 | None:intergenic |
| TTGACGGTGGATTTGAGCGG+AGG | 0.587662 | 8.4:+5084396 | None:intergenic |
| CACTCATGCGAATATCACTT+CGG | 0.595164 | 8.4:-5083477 | MS.gene57961:CDS |
| CCCAGATTAAAGATCCGATA+CGG | 0.595228 | 8.4:+5083611 | None:intergenic |
| CGAAACAACGGTGAACCTGA+CGG | 0.595789 | 8.4:+5084563 | None:intergenic |
| TATGTTAACAGCAACATCGC+CGG | 0.597339 | 8.4:-5084076 | MS.gene57961:CDS |
| CGGTATCTCTCCGCTTCATG+GGG | 0.598560 | 8.4:-5084448 | MS.gene57961:CDS |
| AGTGATATTCGCATGAGTGA+AGG | 0.599504 | 8.4:+5083481 | None:intergenic |
| TTGAATTCCACCCCATGAAG+CGG | 0.604390 | 8.4:+5084438 | None:intergenic |
| CTACATTGACGATATAGTGA+AGG | 0.605438 | 8.4:-5083702 | MS.gene57961:CDS |
| TCCGCTCAAATCCACCGTCA+AGG | 0.609000 | 8.4:-5084394 | MS.gene57961:CDS |
| TGAGCGACTCTTGAAGGTGA+AGG | 0.622782 | 8.4:-5083546 | MS.gene57961:CDS |
| TACATTGACGATATAGTGAA+GGG | 0.627843 | 8.4:-5083701 | MS.gene57961:CDS |
| GGTAAGAGTACTGGATCGGG+TGG | 0.630428 | 8.4:-5083653 | MS.gene57961:CDS |
| CATGCACGATGAAAACGCCC+CGG | 0.632042 | 8.4:+5084215 | None:intergenic |
| TCAAGTATACTCACAAGTGT+CGG | 0.632370 | 8.4:+5083566 | None:intergenic |
| GCCTTGACGGTGGATTTGAG+CGG | 0.637649 | 8.4:+5084393 | None:intergenic |
| CTGACATGCCGCCTTGACGG+TGG | 0.641878 | 8.4:+5084383 | None:intergenic |
| GCTTTGAAAAGAAGAGGTGA+TGG | 0.645226 | 8.4:-5084313 | MS.gene57961:CDS |
| TTCAAGATCGAAAGAAACCA+CGG | 0.649323 | 8.4:-5084595 | MS.gene57961:CDS |
| ACCATGGGGAAGACCAGACA+TGG | 0.649667 | 8.4:-5083816 | MS.gene57961:CDS |
| TTCACTGTTTATGGACCATG+GGG | 0.649938 | 8.4:-5083830 | MS.gene57961:CDS |
| TCTTCCAAAGATGATGATGA+TGG | 0.654769 | 8.4:+5084646 | None:intergenic |
| TGCTTGAAGAACCGAAACAA+CGG | 0.657956 | 8.4:+5084551 | None:intergenic |
| GAAGAAGCCCAAACAATCGA+CGG | 0.665669 | 8.4:+5084010 | None:intergenic |
| AAACCGATTACGGTTTATCG+GGG | 0.681675 | 8.4:-5083758 | MS.gene57961:CDS |
| CGTATCGGATCTTTAATCTG+GGG | 0.681906 | 8.4:-5083610 | MS.gene57961:CDS |
| GGATCGGGTGGAAAGAAACG+TGG | 0.697082 | 8.4:-5083641 | MS.gene57961:CDS |
| CCTGACGGTTCATTAGACCG+TGG | 0.701311 | 8.4:+5084578 | None:intergenic |
| GCTCAAATCCACCGTCAAGG+CGG | 0.724590 | 8.4:-5084391 | MS.gene57961:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATAAATATCATTGA+AGG | + | chr8.4:5084377-5084396 | None:intergenic | 10.0% |
| !!! | AAATTTTGATTTCTATTTTT+CGG | - | chr8.4:5084451-5084470 | MS.gene57961:CDS | 10.0% |
| !!! | ATTATTTATTTCTGATTTTT+TGG | - | chr8.4:5084389-5084408 | MS.gene57961:CDS | 10.0% |
| !! | AAATTTGCAAAAAAGAAAAT+TGG | - | chr8.4:5084574-5084593 | MS.gene57961:CDS | 15.0% |
| !! | AATTTGCAAAAAAGAAAATT+GGG | - | chr8.4:5084575-5084594 | MS.gene57961:CDS | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr8.4:5084153-5084172 | MS.gene57961:CDS | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr8.4:5084152-5084171 | MS.gene57961:CDS | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr8.4:5084088-5084107 | MS.gene57961:CDS | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr8.4:5084087-5084106 | MS.gene57961:CDS | 15.0% |
| !!! | TTTTTTCTTTCTTAGATTTT+AGG | - | chr8.4:5083889-5083908 | MS.gene57961:CDS | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr8.4:5084112-5084131 | MS.gene57961:CDS | 20.0% |
| !! | AAATAGAAATCAAAATTTCC+AGG | + | chr8.4:5084449-5084468 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr8.4:5084185-5084204 | MS.gene57961:CDS | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | chr8.4:5084186-5084205 | MS.gene57961:CDS | 20.0% |
| !! | TATCTTTCTTATTATGGTTA+TGG | - | chr8.4:5083837-5083856 | MS.gene57961:CDS | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr8.4:5084089-5084108 | MS.gene57961:CDS | 20.0% |
| !!! | AGGATTTTAATTTACAGTTA+TGG | - | chr8.4:5083909-5083928 | MS.gene57961:CDS | 20.0% |
| !!! | ATATATTCTTTCCTTCTTTT+TGG | + | chr8.4:5083968-5083987 | None:intergenic | 20.0% |
| !!! | ATTTTAATTTACAGTTATGG+AGG | - | chr8.4:5083912-5083931 | MS.gene57961:CDS | 20.0% |
| !!! | ATTTTCTAATGAATGATGAT+TGG | + | chr8.4:5084558-5084577 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8.4:5084222-5084241 | MS.gene57961:CDS | 20.0% |
| !!! | TGTTGTTTTATAATTTTACC+TGG | - | chr8.4:5084428-5084447 | MS.gene57961:CDS | 20.0% |
| ! | AAGTGGTATCTTTCTTATTA+TGG | - | chr8.4:5083831-5083850 | MS.gene57961:CDS | 25.0% |
| ! | ATTATTCTTTACTTGAGAAG+AGG | - | chr8.4:5083996-5084015 | MS.gene57961:CDS | 25.0% |
| ! | CAAAAAAGAAAATTGGGAAA+AGG | - | chr8.4:5084581-5084600 | MS.gene57961:CDS | 25.0% |
| ! | CAAAGTAGGTCAATTAAATT+GGG | + | chr8.4:5084052-5084071 | None:intergenic | 25.0% |
| ! | CACACTTATAATCACATTTA+CGG | - | chr8.4:5083345-5083364 | MS.gene57961:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr8.4:5084111-5084130 | MS.gene57961:CDS | 25.0% |
| ! | GAAATACTAAACCAGAAAAA+AGG | - | chr8.4:5083934-5083953 | MS.gene57961:CDS | 25.0% |
| ! | TAGATTGTACTACTGTATAA+AGG | - | chr8.4:5084619-5084638 | MS.gene57961:CDS | 25.0% |
| !!! | GATTTTGATTTGTCTAGATT+TGG | - | chr8.4:5084482-5084501 | MS.gene57961:CDS | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8.4:5084221-5084240 | MS.gene57961:CDS | 25.0% |
| !!! | TGATTTCTATTTTTCGGTTT+GGG | - | chr8.4:5084457-5084476 | MS.gene57961:CDS | 25.0% |
| !!! | TTGATTTCTATTTTTCGGTT+TGG | - | chr8.4:5084456-5084475 | MS.gene57961:CDS | 25.0% |
| AAAGTAAAAATAGCCATGTC+TGG | + | chr8.4:5083423-5083442 | None:intergenic | 30.0% | |
| AGTAGAAAAGAAATCAGTCA+AGG | + | chr8.4:5084282-5084301 | None:intergenic | 30.0% | |
| CCAAAGTAGGTCAATTAAAT+TGG | + | chr8.4:5084053-5084072 | None:intergenic | 30.0% | |
| CCAATTTAATTGACCTACTT+TGG | - | chr8.4:5084050-5084069 | MS.gene57961:CDS | 30.0% | |
| TACATTGACGATATAGTGAA+GGG | - | chr8.4:5083522-5083541 | MS.gene57961:CDS | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr8.4:5084096-5084115 | MS.gene57961:CDS | 30.0% | |
| TTCACTAGAAATATGCTTCA+AGG | - | chr8.4:5083441-5083460 | MS.gene57961:intron | 30.0% | |
| TTGAAAAGTGACGTAAGAAA+CGG | + | chr8.4:5082734-5082753 | None:intergenic | 30.0% | |
| TTTCAAAGCAAGAGAAACAT+GGG | + | chr8.4:5082899-5082918 | None:intergenic | 30.0% | |
| ! | TTACGGTTTTTCACTGTTTA+TGG | - | chr8.4:5083384-5083403 | MS.gene57961:intron | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | - | chr8.4:5084199-5084218 | MS.gene57961:CDS | 30.0% |
| ! | TTGCTGTTAACATATGACAT+AGG | + | chr8.4:5083141-5083160 | None:intergenic | 30.0% |
| ! | TTTTCAAAGCAAGAGAAACA+TGG | + | chr8.4:5082900-5082919 | None:intergenic | 30.0% |
| !! | AATACAGTAACTTTTGAGAG+AGG | - | chr8.4:5084642-5084661 | MS.gene57961:CDS | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | - | chr8.4:5084200-5084219 | MS.gene57961:CDS | 30.0% |
| !!! | TTTCGAGCTTTTTTCAATGA+AGG | + | chr8.4:5082973-5082992 | None:intergenic | 30.0% |
| AAAACCGATTACGGTTTATC+GGG | - | chr8.4:5083464-5083483 | MS.gene57961:CDS | 35.0% | |
| AAGAATATTGTAGACATGCC+TGG | - | chr8.4:5083705-5083724 | MS.gene57961:CDS | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr8.4:5084235-5084254 | MS.gene57961:CDS | 35.0% | |
| AGGAAAGAAGTCCAAAAAGA+AGG | - | chr8.4:5083954-5083973 | MS.gene57961:CDS | 35.0% | |
| ATTTACGGTCTTTCAATCAC+TGG | - | chr8.4:5083360-5083379 | MS.gene57961:intron | 35.0% | |
| CTACATTGACGATATAGTGA+AGG | - | chr8.4:5083521-5083540 | MS.gene57961:CDS | 35.0% | |
| CTTCACTATATCGTCAATGT+AGG | + | chr8.4:5083523-5083542 | None:intergenic | 35.0% | |
| GAAAACCGATTACGGTTTAT+CGG | - | chr8.4:5083463-5083482 | MS.gene57961:CDS | 35.0% | |
| GACACACTGTACGAAAATTA+CGG | + | chr8.4:5084513-5084532 | None:intergenic | 35.0% | |
| GGTTGAAAAAATTCGTCAAG+TGG | - | chr8.4:5083814-5083833 | MS.gene57961:CDS | 35.0% | |
| GGTTTATGGTTTAAACGAGA+AGG | - | chr8.4:5083242-5083261 | MS.gene57961:intron | 35.0% | |
| GTAGGTCAATTAAATTGGGA+CGG | + | chr8.4:5084048-5084067 | None:intergenic | 35.0% | |
| TCAAGTATACTCACAAGTGT+CGG | + | chr8.4:5083660-5083679 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr8.4:5084066-5084085 | None:intergenic | 35.0% | |
| TCTTCTTGAAGCTTGCAAAA+CGG | - | chr8.4:5083179-5083198 | MS.gene57961:intron | 35.0% | |
| TGTTGGATCATTGGATACTT+CGG | - | chr8.4:5083548-5083567 | MS.gene57961:CDS | 35.0% | |
| TTCAAGAAGAGTGACTAAAC+CGG | + | chr8.4:5083169-5083188 | None:intergenic | 35.0% | |
| TTCAAGATCGAAAGAAACCA+CGG | - | chr8.4:5082628-5082647 | MS.gene57961:intron | 35.0% | |
| TTTCACTGTTTATGGACCAT+GGG | - | chr8.4:5083392-5083411 | MS.gene57961:intron | 35.0% | |
| ! | AAAAGCTCTTTTATCAAGCC+GGG | - | chr8.4:5082990-5083009 | MS.gene57961:intron | 35.0% |
| ! | CTTTCGATCTTGAATTTTCC+TGG | + | chr8.4:5082622-5082641 | None:intergenic | 35.0% |
| ! | GAAAAGCTCTTTTATCAAGC+CGG | - | chr8.4:5082989-5083008 | MS.gene57961:intron | 35.0% |
| ! | TCTTCCAAAGATGATGATGA+TGG | + | chr8.4:5082580-5082599 | None:intergenic | 35.0% |
| ! | TTTTCACTGTTTATGGACCA+TGG | - | chr8.4:5083391-5083410 | MS.gene57961:intron | 35.0% |
| !! | GTCTTTCAATCACTGGTTTA+CGG | - | chr8.4:5083367-5083386 | MS.gene57961:intron | 35.0% |
| !! | TCTCTTGCTTTGAAAAGAAG+AGG | - | chr8.4:5082904-5082923 | MS.gene57961:intron | 35.0% |
| !!! | CTTGACGAATTTTTTCAACC+CGG | + | chr8.4:5083814-5083833 | None:intergenic | 35.0% |
| !!! | GTTTCTTACGTCACTTTTCA+AGG | - | chr8.4:5082733-5082752 | MS.gene57961:intron | 35.0% |
| !!! | TGGACTTCTTTCCTTTTTTC+TGG | + | chr8.4:5083948-5083967 | None:intergenic | 35.0% |
| AAACCGATTACGGTTTATCG+GGG | - | chr8.4:5083465-5083484 | MS.gene57961:CDS | 40.0% | |
| ACCGTATCGGATCTTTAATC+TGG | - | chr8.4:5083611-5083630 | MS.gene57961:CDS | 40.0% | |
| ACTTCGGCTAGAAGAGAATT+CGG | - | chr8.4:5083762-5083781 | MS.gene57961:CDS | 40.0% | |
| AGTGATATTCGCATGAGTGA+AGG | + | chr8.4:5083745-5083764 | None:intergenic | 40.0% | |
| ATTGTAGACATGCCTGGAAA+TGG | - | chr8.4:5083711-5083730 | MS.gene57961:CDS | 40.0% | |
| CACTCATGCGAATATCACTT+CGG | - | chr8.4:5083746-5083765 | MS.gene57961:CDS | 40.0% | |
| CCACTACTGATATTCAAACC+GGG | - | chr8.4:5083793-5083812 | MS.gene57961:CDS | 40.0% | |
| CCCACTACTGATATTCAAAC+CGG | - | chr8.4:5083792-5083811 | MS.gene57961:CDS | 40.0% | |
| CCCAGATTAAAGATCCGATA+CGG | + | chr8.4:5083615-5083634 | None:intergenic | 40.0% | |
| CCGTATCGGATCTTTAATCT+GGG | - | chr8.4:5083612-5083631 | MS.gene57961:CDS | 40.0% | |
| CGTATCGGATCTTTAATCTG+GGG | - | chr8.4:5083613-5083632 | MS.gene57961:CDS | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr8.4:5084236-5084255 | MS.gene57961:CDS | 40.0% | |
| GATATAGTGAAGGGATGTGT+TGG | - | chr8.4:5083531-5083550 | MS.gene57961:CDS | 40.0% | |
| GCTTCAAGGAAAACCGATTA+CGG | - | chr8.4:5083455-5083474 | MS.gene57961:intron | 40.0% | |
| GTCAATTAAATTGGGACGGA+GGG | + | chr8.4:5084044-5084063 | None:intergenic | 40.0% | |
| GTGATATTCGCATGAGTGAA+GGG | + | chr8.4:5083744-5083763 | None:intergenic | 40.0% | |
| GTTGGATCATTGGATACTTC+GGG | - | chr8.4:5083549-5083568 | MS.gene57961:CDS | 40.0% | |
| TATACTTGAGCGACTCTTGA+AGG | - | chr8.4:5083671-5083690 | MS.gene57961:CDS | 40.0% | |
| TATGTTAACAGCAACATCGC+CGG | - | chr8.4:5083147-5083166 | MS.gene57961:intron | 40.0% | |
| TGCTTGAAGAACCGAAACAA+CGG | + | chr8.4:5082675-5082694 | None:intergenic | 40.0% | |
| TTACCCCGATAAACCGTAAT+CGG | + | chr8.4:5083471-5083490 | None:intergenic | 40.0% | |
| TTCAAGCACCATGTTCTTGT+GGG | - | chr8.4:5082687-5082706 | MS.gene57961:intron | 40.0% | |
| TTCACTGTTTATGGACCATG+GGG | - | chr8.4:5083393-5083412 | MS.gene57961:intron | 40.0% | |
| TTCATGGGGTGGAATTCAAT+GGG | - | chr8.4:5082789-5082808 | MS.gene57961:intron | 40.0% | |
| ! | AAAGCTCTTTTATCAAGCCG+GGG | - | chr8.4:5082991-5083010 | MS.gene57961:intron | 40.0% |
| ! | AGCAAAGCTTTTCGATGTTG+TGG | - | chr8.4:5083056-5083075 | MS.gene57961:intron | 40.0% |
| ! | ATATAAACTCGCCGGTTGAT+CGG | + | chr8.4:5083292-5083311 | None:intergenic | 40.0% |
| ! | CCGGTTTGAATATCAGTAGT+GGG | + | chr8.4:5083795-5083814 | None:intergenic | 40.0% |
| ! | GAAGGTTCCGTTTTCTGAAT+CGG | - | chr8.4:5083260-5083279 | MS.gene57961:intron | 40.0% |
| ! | GATCTTGAATTTTCCTGGAG+TGG | + | chr8.4:5082617-5082636 | None:intergenic | 40.0% |
| ! | GCTTCTTCAAGTTCGGTTTA+TGG | - | chr8.4:5083228-5083247 | MS.gene57961:intron | 40.0% |
| ! | GGTTGATGCGATAAGCAAAA+GGG | + | chr8.4:5082713-5082732 | None:intergenic | 40.0% |
| ! | TGAATTTTCCTGGAGTGGAT+GGG | + | chr8.4:5082612-5082631 | None:intergenic | 40.0% |
| ! | TGTTTGGGCTTCTTCAAGTT+CGG | - | chr8.4:5083221-5083240 | MS.gene57961:intron | 40.0% |
| ! | TTCCGTTTTCTGAATCGGAT+CGG | - | chr8.4:5083265-5083284 | MS.gene57961:intron | 40.0% |
| ! | TTGAATTTTCCTGGAGTGGA+TGG | + | chr8.4:5082613-5082632 | None:intergenic | 40.0% |
| !! | GCTTTGAAAAGAAGAGGTGA+TGG | - | chr8.4:5082910-5082929 | MS.gene57961:intron | 40.0% |
| AAGGGAACATCACCATTTCC+AGG | + | chr8.4:5083726-5083745 | None:intergenic | 45.0% | |
| CGGTTTATCGGGGTAAGAAT+CGG | - | chr8.4:5083475-5083494 | MS.gene57961:CDS | 45.0% | |
| CTTCAAGCACCATGTTCTTG+TGG | - | chr8.4:5082686-5082705 | MS.gene57961:intron | 45.0% | |
| CTTCATGGGGTGGAATTCAA+TGG | - | chr8.4:5082788-5082807 | MS.gene57961:intron | 45.0% | |
| CTTCGGCTAGAAGAGAATTC+GGG | - | chr8.4:5083763-5083782 | MS.gene57961:CDS | 45.0% | |
| GAAGAAGCCCAAACAATCGA+CGG | + | chr8.4:5083216-5083235 | None:intergenic | 45.0% | |
| GAAGGGATGTGTTGGATCAT+TGG | - | chr8.4:5083539-5083558 | MS.gene57961:CDS | 45.0% | |
| GGTCAATTAAATTGGGACGG+AGG | + | chr8.4:5084045-5084064 | None:intergenic | 45.0% | |
| GGTTTATCGGGGTAAGAATC+GGG | - | chr8.4:5083476-5083495 | MS.gene57961:CDS | 45.0% | |
| GTCCGATCCGATTCAGAAAA+CGG | + | chr8.4:5083270-5083289 | None:intergenic | 45.0% | |
| TAATCTGGGGAATACTTCGC+CGG | - | chr8.4:5083626-5083645 | MS.gene57961:CDS | 45.0% | |
| TTGAATTCCACCCCATGAAG+CGG | + | chr8.4:5082788-5082807 | None:intergenic | 45.0% | |
| ! | ATCCTCAACCGTCGATTGTT+TGG | - | chr8.4:5083205-5083224 | MS.gene57961:intron | 45.0% |
| ! | CCCGGTTTGAATATCAGTAG+TGG | + | chr8.4:5083796-5083815 | None:intergenic | 45.0% |
| ! | CGGTTGATGCGATAAGCAAA+AGG | + | chr8.4:5082714-5082733 | None:intergenic | 45.0% |
| ! | GATACTTCGGGTAAGAGTAC+TGG | - | chr8.4:5083561-5083580 | MS.gene57961:CDS | 45.0% |
| ! | TCCTCAACCGTCGATTGTTT+GGG | - | chr8.4:5083206-5083225 | MS.gene57961:intron | 45.0% |
| !! | TTCGGGTAAGAGTACTGGAT+CGG | - | chr8.4:5083566-5083585 | MS.gene57961:CDS | 45.0% |
| !! | TTTCAAGGCGTCGTTGATTC+CGG | - | chr8.4:5082748-5082767 | MS.gene57961:intron | 45.0% |
| AGCTGGTGTGAGATACGCTA+TGG | - | chr8.4:5083110-5083129 | MS.gene57961:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr8.4:5084240-5084259 | MS.gene57961:CDS | 50.0% | |
| CAAAAGGGCCCACAAGAACA+TGG | + | chr8.4:5082698-5082717 | None:intergenic | 50.0% | |
| CGAAACAACGGTGAACCTGA+CGG | + | chr8.4:5082663-5082682 | None:intergenic | 50.0% | |
| CGTCAGGTTCACCGTTGTTT+CGG | - | chr8.4:5082661-5082680 | MS.gene57961:intron | 50.0% | |
| GGCATGTCAGTTCTTGTCAC+CGG | - | chr8.4:5082853-5082872 | MS.gene57961:intron | 50.0% | |
| GTCGCTGCATATAAACTCGC+CGG | + | chr8.4:5083300-5083319 | None:intergenic | 50.0% | |
| TATGCAGCGACGAAGAAAGC+AGG | - | chr8.4:5083309-5083328 | MS.gene57961:intron | 50.0% | |
| TGAGCGACTCTTGAAGGTGA+AGG | - | chr8.4:5083677-5083696 | MS.gene57961:CDS | 50.0% | |
| !! | AGAAGAGGTGATGGTGTCGT+TGG | - | chr8.4:5082919-5082938 | MS.gene57961:intron | 50.0% |
| !! | TCGGGTAAGAGTACTGGATC+GGG | - | chr8.4:5083567-5083586 | MS.gene57961:CDS | 50.0% |
| AACGTGGAGCAGCACCGTAT+CGG | - | chr8.4:5083598-5083617 | MS.gene57961:CDS | 55.0% | |
| ACCATGGGGAAGACCAGACA+TGG | - | chr8.4:5083407-5083426 | MS.gene57961:intron | 55.0% | |
| ATCGGATCGGACCGATCAAC+CGG | - | chr8.4:5083278-5083297 | MS.gene57961:intron | 55.0% | |
| ATGCATCTCGCAGCTCAAGC+TGG | - | chr8.4:5083093-5083112 | MS.gene57961:intron | 55.0% | |
| CAACTCTACCCATCCACTCC+AGG | - | chr8.4:5082601-5082620 | MS.gene57961:intron | 55.0% | |
| CATGCACGATGAAAACGCCC+CGG | + | chr8.4:5083011-5083030 | None:intergenic | 55.0% | |
| CCACGGTCTAATGAACCGTC+AGG | - | chr8.4:5082645-5082664 | MS.gene57961:intron | 55.0% | |
| CCCATGAAGCGGAGAGATAC+CGG | + | chr8.4:5082777-5082796 | None:intergenic | 55.0% | |
| CCGGTATCTCTCCGCTTCAT+GGG | - | chr8.4:5082774-5082793 | MS.gene57961:intron | 55.0% | |
| CCTGACGGTTCATTAGACCG+TGG | + | chr8.4:5082648-5082667 | None:intergenic | 55.0% | |
| CGGTATCTCTCCGCTTCATG+GGG | - | chr8.4:5082775-5082794 | MS.gene57961:intron | 55.0% | |
| CTGGAGTGGATGGGTAGAGT+TGG | + | chr8.4:5082603-5082622 | None:intergenic | 55.0% | |
| GAACTGACATGCCGCCTTGA+CGG | + | chr8.4:5082846-5082865 | None:intergenic | 55.0% | |
| GCCCAAACAATCGACGGTTG+AGG | + | chr8.4:5083210-5083229 | None:intergenic | 55.0% | |
| GCTCAAATCCACCGTCAAGG+CGG | - | chr8.4:5082832-5082851 | MS.gene57961:intron | 55.0% | |
| GGATCGGGTGGAAAGAAACG+TGG | - | chr8.4:5083582-5083601 | MS.gene57961:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr8.4:5084244-5084263 | MS.gene57961:CDS | 55.0% | |
| TATCTCTCCGCTTCATGGGG+TGG | - | chr8.4:5082778-5082797 | MS.gene57961:intron | 55.0% | |
| TCCGCTCAAATCCACCGTCA+AGG | - | chr8.4:5082829-5082848 | MS.gene57961:intron | 55.0% | |
| ! | GCCTTGACGGTGGATTTGAG+CGG | + | chr8.4:5082833-5082852 | None:intergenic | 55.0% |
| ! | TTGACGGTGGATTTGAGCGG+AGG | + | chr8.4:5082830-5082849 | None:intergenic | 55.0% |
| !! | GGTAAGAGTACTGGATCGGG+TGG | - | chr8.4:5083570-5083589 | MS.gene57961:CDS | 55.0% |
| ACCGGCGCAGCAGGTTTCAT+TGG | - | chr8.4:5082871-5082890 | MS.gene57961:intron | 60.0% | |
| CCCAATGAAACCTGCTGCGC+CGG | + | chr8.4:5082875-5082894 | None:intergenic | 60.0% | |
| CCGGCGCAGCAGGTTTCATT+GGG | - | chr8.4:5082872-5082891 | MS.gene57961:intron | 60.0% | |
| GCCGGTATCTCTCCGCTTCA+TGG | - | chr8.4:5082773-5082792 | MS.gene57961:intron | 60.0% | |
| GGGGAATACTTCGCCGGTGA+CGG | - | chr8.4:5083632-5083651 | MS.gene57961:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr8.4:5084243-5084262 | MS.gene57961:CDS | 60.0% | |
| ! | AGCGGAGAGATACCGGCTAC+CGG | + | chr8.4:5082770-5082789 | None:intergenic | 60.0% |
| ! | GCCATGTCTGGTCTTCCCCA+TGG | + | chr8.4:5083411-5083430 | None:intergenic | 60.0% |
| !! | ACAAGTGTCGGCACCGTCAC+CGG | + | chr8.4:5083648-5083667 | None:intergenic | 60.0% |
| !! | CGGGGCGTTTTCATCGTGCA+TGG | - | chr8.4:5083009-5083028 | MS.gene57961:intron | 60.0% |
| !! | GCGTCGTTGATTCCGGTAGC+CGG | - | chr8.4:5082755-5082774 | MS.gene57961:intron | 60.0% |
| CAGCTGTACTCCCTCCGTCC+CGG | + | chr8.4:5084257-5084276 | None:intergenic | 65.0% | |
| CTGACATGCCGCCTTGACGG+TGG | + | chr8.4:5082843-5082862 | None:intergenic | 65.0% | |
| GTTCTTGTCACCGGCGCAGC+AGG | - | chr8.4:5082862-5082881 | MS.gene57961:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 5082574 | 5084671 | 5082574 | ID=MS.gene57961 |
| chr8.4 | mRNA | 5082574 | 5084671 | 5082574 | ID=MS.gene57961.t1;Parent=MS.gene57961 |
| chr8.4 | exon | 5083461 | 5084671 | 5083461 | ID=MS.gene57961.t1.exon1;Parent=MS.gene57961.t1 |
| chr8.4 | CDS | 5083461 | 5084671 | 5083461 | ID=cds.MS.gene57961.t1;Parent=MS.gene57961.t1 |
| chr8.4 | exon | 5082574 | 5082604 | 5082574 | ID=MS.gene57961.t1.exon2;Parent=MS.gene57961.t1 |
| chr8.4 | CDS | 5082574 | 5082604 | 5082574 | ID=cds.MS.gene57961.t1;Parent=MS.gene57961.t1 |
| Gene Sequence |
| Protein sequence |
