Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58078.t1 | XP_003610300.1 | 96.6 | 377 | 7 | 2 | 1 | 375 | 1 | 373 | 6.20E-201 | 709.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58078.t1 | Q8GSJ1 | 81.9 | 359 | 64 | 1 | 18 | 375 | 55 | 413 | 1.9e-166 | 586.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58078.t1 | G7JFL4 | 96.6 | 377 | 7 | 2 | 1 | 375 | 1 | 373 | 4.5e-201 | 709.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050301 | MS.gene58078 | 0.805259 | 1.46E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene58078 | 0.811041 | 8.54E-51 | -1.69E-46 |
| MS.gene052789 | MS.gene58078 | 0.803134 | 4.03E-49 | -1.69E-46 |
| MS.gene05455 | MS.gene58078 | 0.820946 | 5.24E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58078 | MS.gene80051 | PPI |
| MS.gene58078 | MS.gene006461 | PPI |
| MS.gene58078 | MS.gene26894 | PPI |
| MS.gene58078 | MS.gene33570 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58078.t1 | MTR_4g130680 | 96.552 | 377 | 7 | 2 | 1 | 375 | 1 | 373 | 0.0 | 744 |
| MS.gene58078.t1 | MTR_2g006040 | 90.935 | 353 | 10 | 1 | 45 | 375 | 43 | 395 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58078.t1 | AT1G09795 | 81.894 | 359 | 64 | 1 | 18 | 375 | 55 | 413 | 0.0 | 612 |
| MS.gene58078.t1 | AT1G58080 | 82.789 | 337 | 58 | 0 | 39 | 375 | 75 | 411 | 0.0 | 592 |
Find 87 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAATTAACCTGAGGAATT+TGG | 0.106128 | 8.4:-3762514 | None:intergenic |
| CCATTATCTTTCATAAATTT+AGG | 0.185647 | 8.4:-3764590 | None:intergenic |
| TAACAATGTCTTTGGGTCTT+TGG | 0.196414 | 8.4:-3762645 | None:intergenic |
| CTCGATATACTCACTGAATT+TGG | 0.245090 | 8.4:+3762709 | MS.gene58078:CDS |
| AATTGAAGGTGGAACTGTTT+TGG | 0.258121 | 8.4:+3765792 | MS.gene58078:CDS |
| AGAAGACATACGACCTTTAC+TGG | 0.266634 | 8.4:-3762423 | None:intergenic |
| AATAGAGAGGTAAACGAATT+TGG | 0.271491 | 8.4:-3762301 | None:intergenic |
| TTGTTTCAGATTCCGCAATA+TGG | 0.287466 | 8.4:+3764357 | MS.gene58078:intron |
| CGTCAGCTCCTTTCTAAACT+TGG | 0.295403 | 8.4:+3767063 | MS.gene58078:CDS |
| TTAATTAACCTGAGGAATTT+GGG | 0.303133 | 8.4:-3762513 | None:intergenic |
| CCTAAATTTATGAAAGATAA+TGG | 0.327102 | 8.4:+3764590 | MS.gene58078:CDS |
| ATTGTTAGAAAATTGTTATC+TGG | 0.350355 | 8.4:+3762661 | MS.gene58078:CDS |
| AGACTTGTACAGTGCCTTCT+TGG | 0.359607 | 8.4:-3766522 | None:intergenic |
| TATCGTTGTCCACGAGGCTT+TGG | 0.367464 | 8.4:+3764214 | MS.gene58078:CDS |
| AGATTTCAAACTTGGAAGTC+TGG | 0.377840 | 8.4:+3762620 | MS.gene58078:intron |
| TTATCTGGAGATCTTGATCT+TGG | 0.378632 | 8.4:+3762676 | MS.gene58078:CDS |
| CCATCGCGCTTGCAGAAAAC+AGG | 0.381923 | 8.4:-3766458 | None:intergenic |
| CTTGGGCACACATATGACTA+TGG | 0.388474 | 8.4:-3766504 | None:intergenic |
| AAGCCTCTGCGAGTTGCAAC+TGG | 0.392840 | 8.4:+3764441 | MS.gene58078:CDS |
| TGAGATGCTTGAAAGATTAG+AGG | 0.394252 | 8.4:+3766040 | MS.gene58078:CDS |
| TACACTGCAGATTTCAAACT+TGG | 0.415322 | 8.4:+3762612 | MS.gene58078:intron |
| ACCATCGTTAGCTGGGTTGC+AGG | 0.420563 | 8.4:+3766237 | MS.gene58078:CDS |
| GGGGATTGCTGATGCTATCT+TGG | 0.420913 | 8.4:+3765723 | MS.gene58078:CDS |
| CTGAGCCAACCATCGTTAGC+TGG | 0.423235 | 8.4:+3766229 | MS.gene58078:CDS |
| GACTTGTACAGTGCCTTCTT+GGG | 0.445015 | 8.4:-3766521 | None:intergenic |
| GTCAGCTCCTTTCTAAACTT+GGG | 0.445359 | 8.4:+3767064 | MS.gene58078:CDS |
| GATCTTGATCTTGGTATTGT+CGG | 0.455049 | 8.4:+3762685 | MS.gene58078:CDS |
| GTTGAAAGAAAATAACTTGA+AGG | 0.459040 | 8.4:+3765768 | MS.gene58078:CDS |
| GAGGGCTATGGGGCAGTTCA+CGG | 0.460141 | 8.4:+3766070 | MS.gene58078:CDS |
| AGAGGCACATCTGAGGGCTA+TGG | 0.460886 | 8.4:+3766058 | MS.gene58078:CDS |
| TTCGACTGCTGACGGAGCAC+TGG | 0.466865 | 8.4:+3764631 | MS.gene58078:CDS |
| GTCCACGAGGCTTTGGAGTA+CGG | 0.469178 | 8.4:+3764221 | MS.gene58078:CDS |
| GATCTCTTGTCTTCTGCTGC+CGG | 0.470766 | 8.4:-3762387 | None:intergenic |
| AGGAAGTAGTGCAGAGGAAG+TGG | 0.471067 | 8.4:+3766195 | MS.gene58078:CDS |
| TTGACGAGGAAACTCCTAGA+TGG | 0.477208 | 8.4:+3767040 | MS.gene58078:CDS |
| AGGCTGCTCTTGTTGCAAGC+AGG | 0.487061 | 8.4:+3765976 | MS.gene58078:intron |
| ACGTTGTTCCACTACTTACA+AGG | 0.492916 | 8.4:-3765747 | None:intergenic |
| TTGTCAATTGTCAGTCAAGC+AGG | 0.495907 | 8.4:+3762469 | MS.gene58078:CDS |
| GAGGCACATCTGAGGGCTAT+GGG | 0.505249 | 8.4:+3766059 | MS.gene58078:CDS |
| AAATCATTGATCGGACGAAA+AGG | 0.506065 | 8.4:+3765999 | MS.gene58078:CDS |
| GAAAGGAGCTGACGCCATCT+AGG | 0.514685 | 8.4:-3767054 | None:intergenic |
| ATGAGTCTCGGAGGAGATTG+AGG | 0.524502 | 8.4:-3762333 | None:intergenic |
| CAGAAGACAAGAGATCCGTC+TGG | 0.525828 | 8.4:+3762394 | MS.gene58078:CDS |
| GTATGTTGCCCAAATTCCTC+AGG | 0.527688 | 8.4:+3762505 | MS.gene58078:CDS |
| ACTAAAGCCCAAGTTTAGAA+AGG | 0.532749 | 8.4:-3767071 | None:intergenic |
| AATAACTTGAAGGAAATTGA+AGG | 0.546732 | 8.4:+3765778 | MS.gene58078:CDS |
| TGATACACTCGACCTTCTCA+AGG | 0.552104 | 8.4:+3762445 | MS.gene58078:CDS |
| GGCTTATCTTCTGTCCATTG+AGG | 0.552577 | 8.4:-3764423 | None:intergenic |
| ATCTTGGACCTTGTAAGTAG+TGG | 0.552901 | 8.4:+3765739 | MS.gene58078:CDS |
| TGAGCCAACCATCGTTAGCT+GGG | 0.555529 | 8.4:+3766230 | MS.gene58078:CDS |
| GACTGCTGACGGAGCACTGG+AGG | 0.563946 | 8.4:+3764634 | MS.gene58078:CDS |
| AGTCATATGTGTGCCCAAGA+AGG | 0.572168 | 8.4:+3766508 | MS.gene58078:CDS |
| AATGACAACACAATCTCCTC+CGG | 0.573673 | 8.4:+3762368 | MS.gene58078:CDS |
| AGCACTGGAGGCAGCTCCTG+CGG | 0.577767 | 8.4:+3764646 | MS.gene58078:CDS |
| ATTCATGTGATGCAGATTGG+AGG | 0.578035 | 8.4:+3766982 | MS.gene58078:intron |
| GCAACCCAGCTAACGATGGT+TGG | 0.580333 | 8.4:-3766234 | None:intergenic |
| CGTCTGGGTTTACCCAGTAA+AGG | 0.581574 | 8.4:+3762410 | MS.gene58078:CDS |
| TGAAAATGTAAATTCACTAG+AGG | 0.584392 | 8.4:+3764386 | MS.gene58078:CDS |
| TTTCTGCAAGCGCGATGGAA+AGG | 0.585463 | 8.4:+3766463 | MS.gene58078:CDS |
| CTCTTGTCTTCTGCTGCCGG+AGG | 0.586047 | 8.4:-3762384 | None:intergenic |
| TATACTCACTGAATTTGGCC+AGG | 0.586920 | 8.4:+3762714 | MS.gene58078:CDS |
| AAGATTAGAGGCACATCTGA+GGG | 0.596395 | 8.4:+3766052 | MS.gene58078:CDS |
| GTGATGCAGATTGGAGGCAG+CGG | 0.598542 | 8.4:+3766988 | MS.gene58078:intron |
| GTAATTTCAACTCACCGCAA+TGG | 0.599912 | 8.4:-3764258 | None:intergenic |
| GTCTATACAGCAACTGAGAG+CGG | 0.600820 | 8.4:+3766541 | MS.gene58078:CDS |
| AAGAACTTGATGATGAGTCT+CGG | 0.602026 | 8.4:-3762345 | None:intergenic |
| GCAAGCAGGAAATCATTGAT+CGG | 0.612487 | 8.4:+3765990 | MS.gene58078:CDS |
| AAAGATTAGAGGCACATCTG+AGG | 0.618033 | 8.4:+3766051 | MS.gene58078:CDS |
| GAAGACATACGACCTTTACT+GGG | 0.626259 | 8.4:-3762422 | None:intergenic |
| AGAAGACAAGAGATCCGTCT+GGG | 0.626407 | 8.4:+3762395 | MS.gene58078:CDS |
| ACAATTGACAATCCTTGAGA+AGG | 0.631059 | 8.4:-3762457 | None:intergenic |
| TGATTGTCGTTTATCCATTG+CGG | 0.633490 | 8.4:+3764244 | MS.gene58078:CDS |
| AGATAATGGTATTAAGCATG+TGG | 0.634797 | 8.4:+3764604 | MS.gene58078:CDS |
| GAGGCGTAGCAGCAATAGAG+AGG | 0.638994 | 8.4:-3762314 | None:intergenic |
| CAGAAAACAGGACTTACTGT+GGG | 0.647329 | 8.4:-3766446 | None:intergenic |
| CAGGTTGTAGCAAACATGAG+AGG | 0.648123 | 8.4:+3766175 | MS.gene58078:intron |
| AACTTGAAGGAAATTGAAGG+TGG | 0.649831 | 8.4:+3765781 | MS.gene58078:CDS |
| GCAGAAAACAGGACTTACTG+TGG | 0.653659 | 8.4:-3766447 | None:intergenic |
| AATCCAGTTGCAACTCGCAG+AGG | 0.653851 | 8.4:-3764444 | None:intergenic |
| CATGAGAGGAAGTAGTGCAG+AGG | 0.654817 | 8.4:+3766189 | MS.gene58078:CDS |
| AGGCACATCTGAGGGCTATG+GGG | 0.661787 | 8.4:+3766060 | MS.gene58078:CDS |
| AGATCTTATCGTTGTCCACG+AGG | 0.663229 | 8.4:+3764208 | MS.gene58078:CDS |
| ACCTGCAACCCAGCTAACGA+TGG | 0.667474 | 8.4:-3766238 | None:intergenic |
| CACCGTACTCCAAAGCCTCG+TGG | 0.672065 | 8.4:-3764223 | None:intergenic |
| CTTTACTGGGTAAACCCAGA+CGG | 0.678884 | 8.4:-3762409 | None:intergenic |
| ATTTGGGCAACATACTGACG+TGG | 0.682664 | 8.4:-3762497 | None:intergenic |
| AACTTGATGATGAGTCTCGG+AGG | 0.694599 | 8.4:-3762342 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGAATCACATTAATT+GGG | - | chr8.4:3762873-3762892 | None:intergenic | 15.0% |
| !! | AAGATAACAAAGAAATTATT+TGG | - | chr8.4:3762741-3762760 | None:intergenic | 15.0% |
| !! | ATATTATCTTCAAATTTCAT+AGG | + | chr8.4:3764928-3764947 | MS.gene58078:intron | 15.0% |
| !! | ATGTTAATTGTACTAAATAT+AGG | - | chr8.4:3763753-3763772 | None:intergenic | 15.0% |
| !! | ATTACCTAAATGAATAAAAA+AGG | - | chr8.4:3765679-3765698 | None:intergenic | 15.0% |
| !! | GATAAAAAATATTGAGAAAA+AGG | - | chr8.4:3765569-3765588 | None:intergenic | 15.0% |
| !! | TAAATCAAATGATAGTTATT+GGG | + | chr8.4:3764765-3764784 | MS.gene58078:intron | 15.0% |
| !! | TTAAATCAAATGATAGTTAT+TGG | + | chr8.4:3764764-3764783 | MS.gene58078:intron | 15.0% |
| !! | TTATTATTATAATGAAGAGA+AGG | - | chr8.4:3762558-3762577 | None:intergenic | 15.0% |
| !!! | ATAAATTCTAAGAAAATAGA+AGG | - | chr8.4:3763106-3763125 | None:intergenic | 15.0% |
| !!! | TGTTTGAATTTTAAATTTAG+CGG | - | chr8.4:3763723-3763742 | None:intergenic | 15.0% |
| !!! | TTTTATATGTTTCAATGTAT+GGG | + | chr8.4:3762785-3762804 | MS.gene58078:intron | 15.0% |
| !! | AATTCCAAAACCAAAATTTA+TGG | - | chr8.4:3763299-3763318 | None:intergenic | 20.0% |
| !! | AGTCAAGAATTATAAATTGT+AGG | + | chr8.4:3765040-3765059 | MS.gene58078:intron | 20.0% |
| !! | ATAACAATTATCCTTTATCA+GGG | + | chr8.4:3764179-3764198 | MS.gene58078:intron | 20.0% |
| !! | ATAGCTTAATACACTAATAA+TGG | + | chr8.4:3764840-3764859 | MS.gene58078:intron | 20.0% |
| !! | ATTGTTAGAAAATTGTTATC+TGG | + | chr8.4:3762661-3762680 | MS.gene58078:CDS | 20.0% |
| !! | CCAGAAATTTATAATTAGAT+CGG | - | chr8.4:3765256-3765275 | None:intergenic | 20.0% |
| !! | CCATTATCTTTCATAAATTT+AGG | - | chr8.4:3764593-3764612 | None:intergenic | 20.0% |
| !! | CCTAAATTTATGAAAGATAA+TGG | + | chr8.4:3764590-3764609 | MS.gene58078:CDS | 20.0% |
| !! | GAAAAAAGAATCACATTAAT+TGG | - | chr8.4:3762874-3762893 | None:intergenic | 20.0% |
| !! | TATAACAATTATCCTTTATC+AGG | + | chr8.4:3764178-3764197 | MS.gene58078:intron | 20.0% |
| !! | TGAAAGATATAATAAGCTTT+AGG | + | chr8.4:3765099-3765118 | MS.gene58078:intron | 20.0% |
| !!! | AATCGTTTTCTATAGAAAAA+AGG | + | chr8.4:3763589-3763608 | MS.gene58078:intron | 20.0% |
| !!! | AATTTCTTTGTTATCTTTTC+TGG | + | chr8.4:3762744-3762763 | MS.gene58078:intron | 20.0% |
| !!! | AATTTTCTAACAATGTCTTT+GGG | - | chr8.4:3762655-3762674 | None:intergenic | 20.0% |
| !!! | ATTAATGTGATTCTTTTTTC+TGG | + | chr8.4:3762874-3762893 | MS.gene58078:intron | 20.0% |
| !!! | ATTTCTTTGTTATCTTTTCT+GGG | + | chr8.4:3762745-3762764 | MS.gene58078:intron | 20.0% |
| !!! | CTTTTATATGTTTCAATGTA+TGG | + | chr8.4:3762784-3762803 | MS.gene58078:intron | 20.0% |
| !!! | GATAAAAATATTGATTCTCA+TGG | - | chr8.4:3764157-3764176 | None:intergenic | 20.0% |
| !!! | GTTTGAATTTTAAATTTAGC+GGG | - | chr8.4:3763722-3763741 | None:intergenic | 20.0% |
| !!! | TTGACCTTTTTTATTCATTT+AGG | + | chr8.4:3765672-3765691 | MS.gene58078:intron | 20.0% |
| !!! | TTTTCAAATATTCCATATTG+CGG | - | chr8.4:3764372-3764391 | None:intergenic | 20.0% |
| !!! | TTTTGCATATCATATTCATA+TGG | + | chr8.4:3766802-3766821 | MS.gene58078:intron | 20.0% |
| ! | AAACAGGGAAATATCTTATA+TGG | - | chr8.4:3765545-3765564 | None:intergenic | 25.0% |
| ! | AAATGATAGTTATTGGGATT+TGG | + | chr8.4:3764771-3764790 | MS.gene58078:intron | 25.0% |
| ! | AAATTCTTTCAAATTTCGGA+GGG | - | chr8.4:3763327-3763346 | None:intergenic | 25.0% |
| ! | AATAACTTGAAGGAAATTGA+AGG | + | chr8.4:3765778-3765797 | MS.gene58078:CDS | 25.0% |
| ! | AGCATTGTTTGAGTAAATTA+AGG | + | chr8.4:3765210-3765229 | MS.gene58078:intron | 25.0% |
| ! | ATATTGAGAAAAAGGTAAAC+AGG | - | chr8.4:3765561-3765580 | None:intergenic | 25.0% |
| ! | ATTAATTAACCTGAGGAATT+TGG | - | chr8.4:3762517-3762536 | None:intergenic | 25.0% |
| ! | CACAAAACAATGAAATTGAT+AGG | - | chr8.4:3764311-3764330 | None:intergenic | 25.0% |
| ! | CCACAAATTCTTTCAAATTT+CGG | - | chr8.4:3763331-3763350 | None:intergenic | 25.0% |
| ! | CCGATCTAATTATAAATTTC+TGG | + | chr8.4:3765253-3765272 | MS.gene58078:intron | 25.0% |
| ! | GAAATATCTTATATGGAAAG+AGG | - | chr8.4:3765538-3765557 | None:intergenic | 25.0% |
| ! | GATACAAAATTACTAGGAAA+GGG | + | chr8.4:3762926-3762945 | MS.gene58078:intron | 25.0% |
| ! | GCAAATGATACAAAATTACT+AGG | + | chr8.4:3762920-3762939 | MS.gene58078:intron | 25.0% |
| ! | GTAAGTAATTAATTAACCTG+AGG | - | chr8.4:3762524-3762543 | None:intergenic | 25.0% |
| ! | GTTGAAAGAAAATAACTTGA+AGG | + | chr8.4:3765768-3765787 | MS.gene58078:CDS | 25.0% |
| ! | TAAATGTGAATCACATACAT+AGG | - | chr8.4:3764472-3764491 | None:intergenic | 25.0% |
| ! | TAGGAAAAAGAAATTAGACA+CGG | + | chr8.4:3766648-3766667 | MS.gene58078:intron | 25.0% |
| ! | TATGATATGCAAAAATTGAG+AGG | - | chr8.4:3766796-3766815 | None:intergenic | 25.0% |
| ! | TATTGAGAAAAAGGTAAACA+GGG | - | chr8.4:3765560-3765579 | None:intergenic | 25.0% |
| ! | TGAAAATGTAAATTCACTAG+AGG | + | chr8.4:3764386-3764405 | MS.gene58078:CDS | 25.0% |
| ! | TGATACAAAATTACTAGGAA+AGG | + | chr8.4:3762925-3762944 | MS.gene58078:intron | 25.0% |
| ! | TTAATTAACCTGAGGAATTT+GGG | - | chr8.4:3762516-3762535 | None:intergenic | 25.0% |
| !! | CAATTTTCTAACAATGTCTT+TGG | - | chr8.4:3762656-3762675 | None:intergenic | 25.0% |
| !! | CCATTTTCTAATGTTAAATC+CGG | + | chr8.4:3766152-3766171 | MS.gene58078:intron | 25.0% |
| !! | TCAAATCTATATTTTCTCAC+CGG | + | chr8.4:3765135-3765154 | MS.gene58078:intron | 25.0% |
| !! | TGTCTTTTCTCTATTTAGAT+GGG | + | chr8.4:3765703-3765722 | MS.gene58078:intron | 25.0% |
| !! | TTGTCTTTTCTCTATTTAGA+TGG | + | chr8.4:3765702-3765721 | MS.gene58078:intron | 25.0% |
| !! | TTTAGAATCTGAAAACATAC+AGG | - | chr8.4:3764705-3764724 | None:intergenic | 25.0% |
| !!! | ATGTTTTGAAGTTTTATCTG+TGG | + | chr8.4:3764496-3764515 | MS.gene58078:intron | 25.0% |
| !!! | ATTCTCATACCTATTTCTTT+TGG | + | chr8.4:3766955-3766974 | MS.gene58078:intron | 25.0% |
| !!! | CATGGTTATCTTTGATTTTT+GGG | - | chr8.4:3764884-3764903 | None:intergenic | 25.0% |
| !!! | TGATCTGCTGTTTTTTTAAA+AGG | + | chr8.4:3765859-3765878 | MS.gene58078:intron | 25.0% |
| AAAAAAGGAATAGCATATCC+CGG | + | chr8.4:3763604-3763623 | MS.gene58078:intron | 30.0% | |
| AAACATTCCCAAAAAAATGC+AGG | - | chr8.4:3763183-3763202 | None:intergenic | 30.0% | |
| AAATCAAGAATCCATACAAC+TGG | - | chr8.4:3766702-3766721 | None:intergenic | 30.0% | |
| AACATTCCCAAAAAAATGCA+GGG | - | chr8.4:3763182-3763201 | None:intergenic | 30.0% | |
| AAGTTGGCATAATGGTTAAT+AGG | - | chr8.4:3763674-3763693 | None:intergenic | 30.0% | |
| AATAGAGAGGTAAACGAATT+TGG | - | chr8.4:3762304-3762323 | None:intergenic | 30.0% | |
| AATTCTTTCAAATTTCGGAG+GGG | - | chr8.4:3763326-3763345 | None:intergenic | 30.0% | |
| ACAAAGAAATTATTTGGACC+TGG | - | chr8.4:3762735-3762754 | None:intergenic | 30.0% | |
| ACAAAGAGAAAGGAAAAAAC+TGG | - | chr8.4:3766131-3766150 | None:intergenic | 30.0% | |
| AGAAAATGGAACAAAGAGAA+AGG | - | chr8.4:3766141-3766160 | None:intergenic | 30.0% | |
| AGAATAAACCACCTTGAAAT+TGG | + | chr8.4:3763461-3763480 | MS.gene58078:intron | 30.0% | |
| AGAATCACATTAATTGGGAA+CGG | - | chr8.4:3762868-3762887 | None:intergenic | 30.0% | |
| AGGAAAAAGAAATTAGACAC+GGG | + | chr8.4:3766649-3766668 | MS.gene58078:intron | 30.0% | |
| AGTTTCCTCGTCAAAAATAT+AGG | - | chr8.4:3767034-3767053 | None:intergenic | 30.0% | |
| CAAACAATGCTACTAAAATC+AGG | - | chr8.4:3765201-3765220 | None:intergenic | 30.0% | |
| CAAATTCTTTCAAATTTCGG+AGG | - | chr8.4:3763328-3763347 | None:intergenic | 30.0% | |
| CAAGCATGACTATAAGTTAT+TGG | + | chr8.4:3766767-3766786 | MS.gene58078:intron | 30.0% | |
| CCGAAATTTGAAAGAATTTG+TGG | + | chr8.4:3763328-3763347 | MS.gene58078:intron | 30.0% | |
| CCGGATTTAACATTAGAAAA+TGG | - | chr8.4:3766155-3766174 | None:intergenic | 30.0% | |
| GAATAAACCACCTTGAAATT+GGG | + | chr8.4:3763462-3763481 | MS.gene58078:intron | 30.0% | |
| TCAGATATTTGGTATTTGCA+GGG | - | chr8.4:3763412-3763431 | None:intergenic | 30.0% | |
| TCGTCAAAAATATAGGTCAA+GGG | - | chr8.4:3767027-3767046 | None:intergenic | 30.0% | |
| TGAATGTAGCCAAAAGAAAT+AGG | - | chr8.4:3766967-3766986 | None:intergenic | 30.0% | |
| TGCTTCTCTGAATAAATTGA+AGG | - | chr8.4:3763005-3763024 | None:intergenic | 30.0% | |
| TTCAGATATTTGGTATTTGC+AGG | - | chr8.4:3763413-3763432 | None:intergenic | 30.0% | |
| TTTCTATAAGCATGTGAAGA+TGG | + | chr8.4:3766603-3766622 | MS.gene58078:intron | 30.0% | |
| ! | AGATAATGGTATTAAGCATG+TGG | + | chr8.4:3764604-3764623 | MS.gene58078:CDS | 30.0% |
| ! | ATGTTTCAATGTATGGGTTA+AGG | + | chr8.4:3762791-3762810 | MS.gene58078:intron | 30.0% |
| ! | CAACTAGAGTCCATAAATTT+TGG | + | chr8.4:3763286-3763305 | MS.gene58078:intron | 30.0% |
| ! | CTGATAATTGAACACTTTTC+AGG | + | chr8.4:3765956-3765975 | MS.gene58078:intron | 30.0% |
| ! | CTTTTACCTGTGGTTAAATT+GGG | - | chr8.4:3763159-3763178 | None:intergenic | 30.0% |
| ! | GTCTTTTCTCTATTTAGATG+GGG | + | chr8.4:3765704-3765723 | MS.gene58078:intron | 30.0% |
| ! | TGTTTCAATGTATGGGTTAA+GGG | + | chr8.4:3762792-3762811 | MS.gene58078:intron | 30.0% |
| ! | TTTTACCTGTGGTTAAATTG+GGG | - | chr8.4:3763158-3763177 | None:intergenic | 30.0% |
| !! | GAAATGAAGCTATTTCTACT+AGG | - | chr8.4:3763135-3763154 | None:intergenic | 30.0% |
| !! | GCATGGTTATCTTTGATTTT+TGG | - | chr8.4:3764885-3764904 | None:intergenic | 30.0% |
| !! | TATATGTGACTTGTTACTGA+TGG | + | chr8.4:3763239-3763258 | MS.gene58078:intron | 30.0% |
| !! | TTCTTTGAAACATCTATCTC+TGG | + | chr8.4:3763928-3763947 | MS.gene58078:intron | 30.0% |
| !!! | CTCTTTTTTTCTGGTTTATG+TGG | + | chr8.4:3765341-3765360 | MS.gene58078:intron | 30.0% |
| !!! | GAGTCCATAAATTTTGGTTT+TGG | + | chr8.4:3763292-3763311 | MS.gene58078:intron | 30.0% |
| !!! | TAAAAGCCCTGCATTTTTTT+GGG | + | chr8.4:3763173-3763192 | MS.gene58078:intron | 30.0% |
| !!! | TGCAGTTAGTTTTATTCCTT+AGG | - | chr8.4:3763637-3763656 | None:intergenic | 30.0% |
| !!! | TTTTTTCTGGTTTATGTGGA+GGG | + | chr8.4:3765345-3765364 | MS.gene58078:intron | 30.0% |
| !!! | TTTTTTTCTGGTTTATGTGG+AGG | + | chr8.4:3765344-3765363 | MS.gene58078:intron | 30.0% |
| AAAAGCAAAGTTGCATGATC+AGG | - | chr8.4:3764092-3764111 | None:intergenic | 35.0% | |
| AAAAGGTCAACTCCAACATA+TGG | - | chr8.4:3765662-3765681 | None:intergenic | 35.0% | |
| AAAGCAAAGTTGCATGATCA+GGG | - | chr8.4:3764091-3764110 | None:intergenic | 35.0% | |
| AAATCATTGATCGGACGAAA+AGG | + | chr8.4:3765999-3766018 | MS.gene58078:CDS | 35.0% | |
| AACAACAACAACAACAACCA+AGG | + | chr8.4:3766831-3766850 | MS.gene58078:intron | 35.0% | |
| AACTTGAAGGAAATTGAAGG+TGG | + | chr8.4:3765781-3765800 | MS.gene58078:CDS | 35.0% | |
| ACAATTGACAATCCTTGAGA+AGG | - | chr8.4:3762460-3762479 | None:intergenic | 35.0% | |
| ACCATGCTGTTAATGTCTAA+CGG | + | chr8.4:3764898-3764917 | MS.gene58078:intron | 35.0% | |
| AGATTTCAAACTTGGAAGTC+TGG | + | chr8.4:3762620-3762639 | MS.gene58078:intron | 35.0% | |
| AGGGCATACAAAAAAGATTG+TGG | - | chr8.4:3764072-3764091 | None:intergenic | 35.0% | |
| ATATGATACTGCTGCTAATG+CGG | - | chr8.4:3763073-3763092 | None:intergenic | 35.0% | |
| ATCCTCCCCTAAAATGAATT+AGG | - | chr8.4:3766293-3766312 | None:intergenic | 35.0% | |
| ATCGGACTTCTCAATTCAAT+GGG | - | chr8.4:3765238-3765257 | None:intergenic | 35.0% | |
| ATGCAAAGAAACCAGTTGTA+TGG | + | chr8.4:3766688-3766707 | MS.gene58078:intron | 35.0% | |
| ATTCTTTCAAATTTCGGAGG+GGG | - | chr8.4:3763325-3763344 | None:intergenic | 35.0% | |
| CAAAGAAGACTGTGAAGAAA+CGG | - | chr8.4:3763047-3763066 | None:intergenic | 35.0% | |
| CAAGGGAGACTCTTAAAATT+AGG | - | chr8.4:3766408-3766427 | None:intergenic | 35.0% | |
| CAATTGCAGAACAATGTTCT+GGG | + | chr8.4:3764127-3764146 | MS.gene58078:intron | 35.0% | |
| CAGTAACAAGTCACATATAG+AGG | - | chr8.4:3763238-3763257 | None:intergenic | 35.0% | |
| CCCTAAAATGAATTAGGGTT+GGG | - | chr8.4:3766287-3766306 | None:intergenic | 35.0% | |
| CTCGATATACTCACTGAATT+TGG | + | chr8.4:3762709-3762728 | MS.gene58078:CDS | 35.0% | |
| CTCGTCAAAAATATAGGTCA+AGG | - | chr8.4:3767028-3767047 | None:intergenic | 35.0% | |
| GAAGATACATTCTACCTTGT+TGG | + | chr8.4:3764961-3764980 | MS.gene58078:intron | 35.0% | |
| GAGACTCTTAAAATTAGGAG+TGG | - | chr8.4:3766403-3766422 | None:intergenic | 35.0% | |
| GATAGTTATTGGGATTTGGA+AGG | + | chr8.4:3764775-3764794 | MS.gene58078:intron | 35.0% | |
| GATCTTGATCTTGGTATTGT+CGG | + | chr8.4:3762685-3762704 | MS.gene58078:CDS | 35.0% | |
| GCAGAAAGCAAATACAGAAA+GGG | - | chr8.4:3766321-3766340 | None:intergenic | 35.0% | |
| GTGAGGCAAATTCAGATATT+TGG | - | chr8.4:3763423-3763442 | None:intergenic | 35.0% | |
| TAACAATGTCTTTGGGTCTT+TGG | - | chr8.4:3762648-3762667 | None:intergenic | 35.0% | |
| TACACTGCAGATTTCAAACT+TGG | + | chr8.4:3762612-3762631 | MS.gene58078:intron | 35.0% | |
| TACATTCATGTGATGCAGAT+TGG | + | chr8.4:3766979-3766998 | MS.gene58078:intron | 35.0% | |
| TAGCCACAAATTAACCAACA+AGG | - | chr8.4:3764978-3764997 | None:intergenic | 35.0% | |
| TCCTCCCCTAAAATGAATTA+GGG | - | chr8.4:3766292-3766311 | None:intergenic | 35.0% | |
| TGAGATGCTTGAAAGATTAG+AGG | + | chr8.4:3766040-3766059 | MS.gene58078:CDS | 35.0% | |
| TGCAGAAAGCAAATACAGAA+AGG | - | chr8.4:3766322-3766341 | None:intergenic | 35.0% | |
| TGTGAATAGTCACTACTTAC+TGG | - | chr8.4:3763808-3763827 | None:intergenic | 35.0% | |
| TTATCTGGAGATCTTGATCT+TGG | + | chr8.4:3762676-3762695 | MS.gene58078:CDS | 35.0% | |
| TTGTTTCAGATTCCGCAATA+TGG | + | chr8.4:3764357-3764376 | MS.gene58078:intron | 35.0% | |
| TTTACCTGTGGTTAAATTGG+GGG | - | chr8.4:3763157-3763176 | None:intergenic | 35.0% | |
| TTTCTAATGTTAAATCCGGC+AGG | + | chr8.4:3766156-3766175 | MS.gene58078:intron | 35.0% | |
| ! | AATTGAAGGTGGAACTGTTT+TGG | + | chr8.4:3765792-3765811 | MS.gene58078:CDS | 35.0% |
| ! | CCAACCCTAATTCATTTTAG+GGG | + | chr8.4:3766285-3766304 | MS.gene58078:intron | 35.0% |
| ! | CCCAACCCTAATTCATTTTA+GGG | + | chr8.4:3766284-3766303 | MS.gene58078:intron | 35.0% |
| ! | CTACCTTGTTGGTTAATTTG+TGG | + | chr8.4:3764972-3764991 | MS.gene58078:intron | 35.0% |
| ! | GCTTTTACCTGTGGTTAAAT+TGG | - | chr8.4:3763160-3763179 | None:intergenic | 35.0% |
| ! | GTTTCAATGTATGGGTTAAG+GGG | + | chr8.4:3762793-3762812 | MS.gene58078:intron | 35.0% |
| ! | TGAGTCTGTGTTTTACGATT+GGG | + | chr8.4:3765384-3765403 | MS.gene58078:intron | 35.0% |
| ! | TGATTGTCGTTTATCCATTG+CGG | + | chr8.4:3764244-3764263 | MS.gene58078:CDS | 35.0% |
| ! | TTGAGTCTGTGTTTTACGAT+TGG | + | chr8.4:3765383-3765402 | MS.gene58078:intron | 35.0% |
| ! | TTTTGTGTGTGAAGAAGTTC+TGG | + | chr8.4:3765303-3765322 | MS.gene58078:intron | 35.0% |
| !! | AAGAACTTGATGATGAGTCT+CGG | - | chr8.4:3762348-3762367 | None:intergenic | 35.0% |
| !! | CTTGACCTATATTTTTGACG+AGG | + | chr8.4:3767026-3767045 | MS.gene58078:CDS | 35.0% |
| !!! | GTAAAAGCCCTGCATTTTTT+TGG | + | chr8.4:3763172-3763191 | MS.gene58078:intron | 35.0% |
| !!! | TAAGCATACCTTGTCGTTTT+TGG | + | chr8.4:3765926-3765945 | MS.gene58078:intron | 35.0% |
| !!! | TTTTTCTGGTTTATGTGGAG+GGG | + | chr8.4:3765346-3765365 | MS.gene58078:intron | 35.0% |
| AAACCATGATGAGCTTCAAG+TGG | - | chr8.4:3763546-3763565 | None:intergenic | 40.0% | |
| AACAGCAGATCATGCTAGTT+AGG | - | chr8.4:3765851-3765870 | None:intergenic | 40.0% | |
| AAGATGGTTGTGAGCTAATG+GGG | + | chr8.4:3766619-3766638 | MS.gene58078:intron | 40.0% | |
| AAGGTGGTTTATTCTTCGTG+TGG | - | chr8.4:3763456-3763475 | None:intergenic | 40.0% | |
| AATCTTCCGATGCTTTGACA+AGG | + | chr8.4:3763512-3763531 | MS.gene58078:intron | 40.0% | |
| AATGACAACACAATCTCCTC+CGG | + | chr8.4:3762368-3762387 | MS.gene58078:CDS | 40.0% | |
| ACACTAAGAGCAGAGTTCAA+TGG | - | chr8.4:3765425-3765444 | None:intergenic | 40.0% | |
| ACAGCAGATCATGCTAGTTA+GGG | - | chr8.4:3765850-3765869 | None:intergenic | 40.0% | |
| ACATCTATCTCTGGTCATCA+TGG | + | chr8.4:3763937-3763956 | MS.gene58078:intron | 40.0% | |
| ACATGGCACATAAAGCTTTC+CGG | - | chr8.4:3765157-3765176 | None:intergenic | 40.0% | |
| ACGACTAGCATCCTCAATTT+CGG | - | chr8.4:3763870-3763889 | None:intergenic | 40.0% | |
| ACGTTGTTCCACTACTTACA+AGG | - | chr8.4:3765750-3765769 | None:intergenic | 40.0% | |
| AGAAGACATACGACCTTTAC+TGG | - | chr8.4:3762426-3762445 | None:intergenic | 40.0% | |
| AGCTAGCAAAAATGCCTCAA+TGG | + | chr8.4:3764409-3764428 | MS.gene58078:CDS | 40.0% | |
| ATCTTGGACCTTGTAAGTAG+TGG | + | chr8.4:3765739-3765758 | MS.gene58078:CDS | 40.0% | |
| ATTAGACACGGGTGTTTGAA+TGG | + | chr8.4:3766660-3766679 | MS.gene58078:intron | 40.0% | |
| ATTCATGTGATGCAGATTGG+AGG | + | chr8.4:3766982-3767001 | MS.gene58078:intron | 40.0% | |
| ATTTCCCCCAATTTAACCAC+AGG | + | chr8.4:3763150-3763169 | MS.gene58078:intron | 40.0% | |
| CAGAAAACAGGACTTACTGT+GGG | - | chr8.4:3766449-3766468 | None:intergenic | 40.0% | |
| CATCGGAAGATTCATGTTTG+CGG | - | chr8.4:3763504-3763523 | None:intergenic | 40.0% | |
| CCCCTAAAATGAATTAGGGT+TGG | - | chr8.4:3766288-3766307 | None:intergenic | 40.0% | |
| CCCTGTAGATAGACAATCAA+GGG | - | chr8.4:3766425-3766444 | None:intergenic | 40.0% | |
| CCCTTGATTGTCTATCTACA+GGG | + | chr8.4:3766422-3766441 | MS.gene58078:intron | 40.0% | |
| CTACTCACTATCACAATGCA+TGG | - | chr8.4:3766364-3766383 | None:intergenic | 40.0% | |
| GAAGACATACGACCTTTACT+GGG | - | chr8.4:3762425-3762444 | None:intergenic | 40.0% | |
| GAAGATGGTTGTGAGCTAAT+GGG | + | chr8.4:3766618-3766637 | MS.gene58078:intron | 40.0% | |
| GAAGATTCATGTTTGCGGTT+GGG | - | chr8.4:3763499-3763518 | None:intergenic | 40.0% | |
| GAGAAAGGAAAAAACTGGTG+AGG | - | chr8.4:3766126-3766145 | None:intergenic | 40.0% | |
| GAGTGAAACCAAAAACGACA+AGG | - | chr8.4:3765937-3765956 | None:intergenic | 40.0% | |
| GATCGGACTTCTCAATTCAA+TGG | - | chr8.4:3765239-3765258 | None:intergenic | 40.0% | |
| GATCTTCATTGCCCTGATAA+AGG | - | chr8.4:3764193-3764212 | None:intergenic | 40.0% | |
| GCAAGCAGGAAATCATTGAT+CGG | + | chr8.4:3765990-3766009 | MS.gene58078:CDS | 40.0% | |
| GCAATTGCAGAACAATGTTC+TGG | + | chr8.4:3764126-3764145 | MS.gene58078:intron | 40.0% | |
| GTAATTTCAACTCACCGCAA+TGG | - | chr8.4:3764261-3764280 | None:intergenic | 40.0% | |
| GTCAGCTCCTTTCTAAACTT+GGG | + | chr8.4:3767064-3767083 | MS.gene58078:CDS | 40.0% | |
| TATACTCACTGAATTTGGCC+AGG | + | chr8.4:3762714-3762733 | MS.gene58078:CDS | 40.0% | |
| TCCCTGTAGATAGACAATCA+AGG | - | chr8.4:3766426-3766445 | None:intergenic | 40.0% | |
| TCCCTTGATTGTCTATCTAC+AGG | + | chr8.4:3766421-3766440 | MS.gene58078:intron | 40.0% | |
| TCGGACTTCTCAATTCAATG+GGG | - | chr8.4:3765237-3765256 | None:intergenic | 40.0% | |
| TGAAGATGGTTGTGAGCTAA+TGG | + | chr8.4:3766617-3766636 | MS.gene58078:intron | 40.0% | |
| TGCAATTGCATTTAAGCCGA+GGG | - | chr8.4:3764115-3764134 | None:intergenic | 40.0% | |
| TTAGACACGGGTGTTTGAAT+GGG | + | chr8.4:3766661-3766680 | MS.gene58078:intron | 40.0% | |
| TTATTCCTTAGGTGCAGAAC+CGG | - | chr8.4:3763626-3763645 | None:intergenic | 40.0% | |
| TTCCTTCTTACTCTTCAGCT+GGG | + | chr8.4:3764566-3764585 | MS.gene58078:intron | 40.0% | |
| TTGTCAATTGTCAGTCAAGC+AGG | + | chr8.4:3762469-3762488 | MS.gene58078:CDS | 40.0% | |
| TTTCCTTCTTACTCTTCAGC+TGG | + | chr8.4:3764565-3764584 | MS.gene58078:intron | 40.0% | |
| ! | AAAGATTAGAGGCACATCTG+AGG | + | chr8.4:3766051-3766070 | MS.gene58078:CDS | 40.0% |
| ! | AAGATTAGAGGCACATCTGA+GGG | + | chr8.4:3766052-3766071 | MS.gene58078:CDS | 40.0% |
| ! | AATGTTTGATGTCGCTTCAC+TGG | - | chr8.4:3763699-3763718 | None:intergenic | 40.0% |
| ! | ATGTTTGATGTCGCTTCACT+GGG | - | chr8.4:3763698-3763717 | None:intergenic | 40.0% |
| ! | ATTGCGGAATCTGAAACAAC+AGG | - | chr8.4:3764356-3764375 | None:intergenic | 40.0% |
| !! | ACCCTAATTCATTTTAGGGG+AGG | + | chr8.4:3766288-3766307 | MS.gene58078:intron | 40.0% |
| !! | ATGCAACTTTGCTTTTCCCT+CGG | + | chr8.4:3764096-3764115 | MS.gene58078:intron | 40.0% |
| !! | GTGAAGAAGTTCTGGTTTCT+TGG | + | chr8.4:3765311-3765330 | MS.gene58078:intron | 40.0% |
| !!! | CTGTTTTTTTAAAAGGCGCC+TGG | + | chr8.4:3765866-3765885 | MS.gene58078:intron | 40.0% |
| !!! | GGCATTGTGCTCTTTTTTTC+TGG | + | chr8.4:3765332-3765351 | MS.gene58078:intron | 40.0% |
| !!! | TGGAACTGTTTTGGAAAGTC+AGG | + | chr8.4:3765801-3765820 | MS.gene58078:CDS | 40.0% |
| !!! | TTTTCTGGTTTATGTGGAGG+GGG | + | chr8.4:3765347-3765366 | MS.gene58078:intron | 40.0% |
| AAAAAACTGGTGAGGAGACG+AGG | - | chr8.4:3766118-3766137 | None:intergenic | 45.0% | |
| AAGGCTTATCCCACTAAGTG+GGG | + | chr8.4:3766850-3766869 | MS.gene58078:intron | 45.0% | |
| ACTCCACTTGAAGCTCATCA+TGG | + | chr8.4:3763540-3763559 | MS.gene58078:intron | 45.0% | |
| AGAAGACAAGAGATCCGTCT+GGG | + | chr8.4:3762395-3762414 | MS.gene58078:CDS | 45.0% | |
| AGACTTGTACAGTGCCTTCT+TGG | - | chr8.4:3766525-3766544 | None:intergenic | 45.0% | |
| AGATCTTATCGTTGTCCACG+AGG | + | chr8.4:3764208-3764227 | MS.gene58078:CDS | 45.0% | |
| AGTCATATGTGTGCCCAAGA+AGG | + | chr8.4:3766508-3766527 | MS.gene58078:CDS | 45.0% | |
| ATTTGGGCAACATACTGACG+TGG | - | chr8.4:3762500-3762519 | None:intergenic | 45.0% | |
| CAAACACTATCTCTTACCGC+AGG | - | chr8.4:3764665-3764684 | None:intergenic | 45.0% | |
| CAAGGCTTATCCCACTAAGT+GGG | + | chr8.4:3766849-3766868 | MS.gene58078:intron | 45.0% | |
| CACTGGGAAAGTTGGCATAA+TGG | - | chr8.4:3763682-3763701 | None:intergenic | 45.0% | |
| CAGCATCAATGAGATGGTGA+CGG | - | chr8.4:3765636-3765655 | None:intergenic | 45.0% | |
| CAGGTTGTAGCAAACATGAG+AGG | + | chr8.4:3766175-3766194 | MS.gene58078:intron | 45.0% | |
| CGTCAGCTCCTTTCTAAACT+TGG | + | chr8.4:3767063-3767082 | MS.gene58078:CDS | 45.0% | |
| CTAGAGGACTCCCAATTTCA+AGG | - | chr8.4:3763475-3763494 | None:intergenic | 45.0% | |
| CTCTGATGAGTCCGAAATTG+AGG | + | chr8.4:3763856-3763875 | MS.gene58078:intron | 45.0% | |
| CTGCAATTGCATTTAAGCCG+AGG | - | chr8.4:3764116-3764135 | None:intergenic | 45.0% | |
| CTTGGGCACACATATGACTA+TGG | - | chr8.4:3766507-3766526 | None:intergenic | 45.0% | |
| CTTTACTGGGTAAACCCAGA+CGG | - | chr8.4:3762412-3762431 | None:intergenic | 45.0% | |
| GAAGGAGGAGATTCATAGCA+GGG | + | chr8.4:3762815-3762834 | MS.gene58078:intron | 45.0% | |
| GACTTGTACAGTGCCTTCTT+GGG | - | chr8.4:3766524-3766543 | None:intergenic | 45.0% | |
| GCAGAAAACAGGACTTACTG+TGG | - | chr8.4:3766450-3766469 | None:intergenic | 45.0% | |
| GCCGTTAGACATTAACAGCA+TGG | - | chr8.4:3764902-3764921 | None:intergenic | 45.0% | |
| GCTTTATGTGCCATGTTGAC+CGG | + | chr8.4:3765161-3765180 | MS.gene58078:intron | 45.0% | |
| GGAAGATTCATGTTTGCGGT+TGG | - | chr8.4:3763500-3763519 | None:intergenic | 45.0% | |
| GGCTTATCTTCTGTCCATTG+AGG | - | chr8.4:3764426-3764445 | None:intergenic | 45.0% | |
| GTATGTTGCCCAAATTCCTC+AGG | + | chr8.4:3762505-3762524 | MS.gene58078:CDS | 45.0% | |
| GTCTATACAGCAACTGAGAG+CGG | + | chr8.4:3766541-3766560 | MS.gene58078:CDS | 45.0% | |
| GTGAAGAAACGGAAACGAGA+AGG | - | chr8.4:3763036-3763055 | None:intergenic | 45.0% | |
| TACATAGCCTACGCTACATG+TGG | + | chr8.4:3762898-3762917 | MS.gene58078:intron | 45.0% | |
| TATTCCTTAGGTGCAGAACC+GGG | - | chr8.4:3763625-3763644 | None:intergenic | 45.0% | |
| TCAGGAACGTTCACAAATGC+CGG | - | chr8.4:3765183-3765202 | None:intergenic | 45.0% | |
| TCATTTGCCACATGTAGCGT+AGG | - | chr8.4:3762908-3762927 | None:intergenic | 45.0% | |
| TGAGCTAATGGGGCTAACTT+AGG | + | chr8.4:3766629-3766648 | MS.gene58078:intron | 45.0% | |
| TGATACACTCGACCTTCTCA+AGG | + | chr8.4:3762445-3762464 | MS.gene58078:CDS | 45.0% | |
| TTACCGCCTTGTCAAAGCAT+CGG | - | chr8.4:3763521-3763540 | None:intergenic | 45.0% | |
| TTCACAAATGCCGGTCAACA+TGG | - | chr8.4:3765174-3765193 | None:intergenic | 45.0% | |
| TTGACGAGGAAACTCCTAGA+TGG | + | chr8.4:3767040-3767059 | MS.gene58078:CDS | 45.0% | |
| TTGATGCTGCTGCCATATGT+TGG | + | chr8.4:3765647-3765666 | MS.gene58078:intron | 45.0% | |
| TTGTGTGCTTTAGCCCTGAT+CGG | + | chr8.4:3763996-3764015 | MS.gene58078:intron | 45.0% | |
| ! | AAATGCAGGGCTTTTACCTG+TGG | - | chr8.4:3763169-3763188 | None:intergenic | 45.0% |
| ! | CAATGTATGGGTTAAGGGGA+AGG | + | chr8.4:3762797-3762816 | MS.gene58078:intron | 45.0% |
| ! | CACTACTTACTGGTCTCAGT+AGG | - | chr8.4:3763798-3763817 | None:intergenic | 45.0% |
| ! | CATGAGAAGCAGCATTTTCC+AGG | - | chr8.4:3765887-3765906 | None:intergenic | 45.0% |
| ! | TCATGTTTGCTACAACCTGC+CGG | - | chr8.4:3766174-3766193 | None:intergenic | 45.0% |
| ! | TGCTGCTTCTCATGTCTTGT+TGG | + | chr8.4:3765893-3765912 | MS.gene58078:intron | 45.0% |
| ! | TGTTTTACGATTGGGTCCCA+AGG | + | chr8.4:3765392-3765411 | MS.gene58078:intron | 45.0% |
| !! | AACTTGATGATGAGTCTCGG+AGG | - | chr8.4:3762345-3762364 | None:intergenic | 45.0% |
| !! | CGTGTGGTTCTAAGATAGTG+AGG | - | chr8.4:3763440-3763459 | None:intergenic | 45.0% |
| !! | TTTCTGGTTTATGTGGAGGG+GGG | + | chr8.4:3765348-3765367 | MS.gene58078:intron | 45.0% |
| AAGTGGGGTCGGCATTCAAA+TGG | + | chr8.4:3766865-3766884 | MS.gene58078:intron | 50.0% | |
| AATCCAGTTGCAACTCGCAG+AGG | - | chr8.4:3764447-3764466 | None:intergenic | 50.0% | |
| AGGAAGTAGTGCAGAGGAAG+TGG | + | chr8.4:3766195-3766214 | MS.gene58078:CDS | 50.0% | |
| AGTTCAATGGCAACAGGCCT+TGG | - | chr8.4:3765412-3765431 | None:intergenic | 50.0% | |
| ATATCCCGGTTCTGCACCTA+AGG | + | chr8.4:3763618-3763637 | MS.gene58078:intron | 50.0% | |
| ATGAGTCTCGGAGGAGATTG+AGG | - | chr8.4:3762336-3762355 | None:intergenic | 50.0% | |
| ATGTTTGCGGTTGGGTCTAG+AGG | - | chr8.4:3763491-3763510 | None:intergenic | 50.0% | |
| CAGAAGACAAGAGATCCGTC+TGG | + | chr8.4:3762394-3762413 | MS.gene58078:CDS | 50.0% | |
| CATGAGAGGAAGTAGTGCAG+AGG | + | chr8.4:3766189-3766208 | MS.gene58078:CDS | 50.0% | |
| CCAAGGCTTATCCCACTAAG+TGG | + | chr8.4:3766848-3766867 | MS.gene58078:intron | 50.0% | |
| CCACTTAGTGGGATAAGCCT+TGG | - | chr8.4:3766851-3766870 | None:intergenic | 50.0% | |
| CGTCTGGGTTTACCCAGTAA+AGG | + | chr8.4:3762410-3762429 | MS.gene58078:CDS | 50.0% | |
| CTGGGTTGCAGGTGTGATAT+GGG | + | chr8.4:3766248-3766267 | MS.gene58078:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr8.4:3766854-3766873 | MS.gene58078:intron | 50.0% | |
| CTTCCGATGCTTTGACAAGG+CGG | + | chr8.4:3763515-3763534 | MS.gene58078:intron | 50.0% | |
| GACCCAGCTGAAGAGTAAGA+AGG | - | chr8.4:3764571-3764590 | None:intergenic | 50.0% | |
| GAGCAGAGTTCAATGGCAAC+AGG | - | chr8.4:3765418-3765437 | None:intergenic | 50.0% | |
| GAGGACTCCCAATTTCAAGG+TGG | - | chr8.4:3763472-3763491 | None:intergenic | 50.0% | |
| GATCTCTTGTCTTCTGCTGC+CGG | - | chr8.4:3762390-3762409 | None:intergenic | 50.0% | |
| GGAAGGAGGAGATTCATAGC+AGG | + | chr8.4:3762814-3762833 | MS.gene58078:intron | 50.0% | |
| GGGGATTGCTGATGCTATCT+TGG | + | chr8.4:3765723-3765742 | MS.gene58078:CDS | 50.0% | |
| GTTCAATGGCAACAGGCCTT+GGG | - | chr8.4:3765411-3765430 | None:intergenic | 50.0% | |
| TATCGTTGTCCACGAGGCTT+TGG | + | chr8.4:3764214-3764233 | MS.gene58078:CDS | 50.0% | |
| TGAGCCAACCATCGTTAGCT+GGG | + | chr8.4:3766230-3766249 | MS.gene58078:CDS | 50.0% | |
| TGGCAGCAGCATCAATGAGA+TGG | - | chr8.4:3765642-3765661 | None:intergenic | 50.0% | |
| TTCGGACTCATCAGAGCTGT+GGG | - | chr8.4:3763852-3763871 | None:intergenic | 50.0% | |
| TTTCGGACTCATCAGAGCTG+TGG | - | chr8.4:3763853-3763872 | None:intergenic | 50.0% | |
| TTTCTGCAAGCGCGATGGAA+AGG | + | chr8.4:3766463-3766482 | MS.gene58078:CDS | 50.0% | |
| ! | GGCTATAGCATCTGAGACGT+CGG | - | chr8.4:3763217-3763236 | None:intergenic | 50.0% |
| ! | GTGGCATTTTCGACTGCTGA+CGG | + | chr8.4:3764623-3764642 | MS.gene58078:CDS | 50.0% |
| ! | TGTATGGGTTAAGGGGAAGG+AGG | + | chr8.4:3762800-3762819 | MS.gene58078:intron | 50.0% |
| ! | TGTCGCTTCACTGGGAAAGT+TGG | - | chr8.4:3763690-3763709 | None:intergenic | 50.0% |
| AAGCCTCTGCGAGTTGCAAC+TGG | + | chr8.4:3764441-3764460 | MS.gene58078:CDS | 55.0% | |
| ACCATCGTTAGCTGGGTTGC+AGG | + | chr8.4:3766237-3766256 | MS.gene58078:CDS | 55.0% | |
| ACCTGCAACCCAGCTAACGA+TGG | - | chr8.4:3766241-3766260 | None:intergenic | 55.0% | |
| AGGCACATCTGAGGGCTATG+GGG | + | chr8.4:3766060-3766079 | MS.gene58078:CDS | 55.0% | |
| AGGCTGCTCTTGTTGCAAGC+AGG | + | chr8.4:3765976-3765995 | MS.gene58078:intron | 55.0% | |
| AGTCATGCTTGCCATCGCCA+AGG | - | chr8.4:3766758-3766777 | None:intergenic | 55.0% | |
| CCATCGCGCTTGCAGAAAAC+AGG | - | chr8.4:3766461-3766480 | None:intergenic | 55.0% | |
| CTGAGCCAACCATCGTTAGC+TGG | + | chr8.4:3766229-3766248 | MS.gene58078:CDS | 55.0% | |
| GAAAGGAGCTGACGCCATCT+AGG | - | chr8.4:3767057-3767076 | None:intergenic | 55.0% | |
| GAATGCCGACCCCACTTAGT+GGG | - | chr8.4:3766862-3766881 | None:intergenic | 55.0% | |
| GAGGCACATCTGAGGGCTAT+GGG | + | chr8.4:3766059-3766078 | MS.gene58078:CDS | 55.0% | |
| GAGGCGTAGCAGCAATAGAG+AGG | - | chr8.4:3762317-3762336 | None:intergenic | 55.0% | |
| GCAACCCAGCTAACGATGGT+TGG | - | chr8.4:3766237-3766256 | None:intergenic | 55.0% | |
| GCAAGTAGAACCGCCGATCA+GGG | - | chr8.4:3764012-3764031 | None:intergenic | 55.0% | |
| GCTGGGTTGCAGGTGTGATA+TGG | + | chr8.4:3766247-3766266 | MS.gene58078:intron | 55.0% | |
| GTCATGCTTGCCATCGCCAA+GGG | - | chr8.4:3766757-3766776 | None:intergenic | 55.0% | |
| GTGATGCAGATTGGAGGCAG+CGG | + | chr8.4:3766988-3767007 | MS.gene58078:intron | 55.0% | |
| TGAATGCCGACCCCACTTAG+TGG | - | chr8.4:3766863-3766882 | None:intergenic | 55.0% | |
| TGTGCTTTAGCCCTGATCGG+CGG | + | chr8.4:3763999-3764018 | MS.gene58078:intron | 55.0% | |
| ! | AGAGGCACATCTGAGGGCTA+TGG | + | chr8.4:3766058-3766077 | MS.gene58078:CDS | 55.0% |
| ! | CCTGTTTTCTGCAAGCGCGA+TGG | + | chr8.4:3766458-3766477 | MS.gene58078:CDS | 55.0% |
| !! | GTCCACGAGGCTTTGGAGTA+CGG | + | chr8.4:3764221-3764240 | MS.gene58078:CDS | 55.0% |
| ACTCCCTGACCTGTTGCCCT+TGG | + | chr8.4:3766738-3766757 | MS.gene58078:intron | 60.0% | |
| ATCGCCAAGGGCAACAGGTC+AGG | - | chr8.4:3766745-3766764 | None:intergenic | 60.0% | |
| CACCGTACTCCAAAGCCTCG+TGG | - | chr8.4:3764226-3764245 | None:intergenic | 60.0% | |
| CGCAAGTAGAACCGCCGATC+AGG | - | chr8.4:3764013-3764032 | None:intergenic | 60.0% | |
| CTCTTGTCTTCTGCTGCCGG+AGG | - | chr8.4:3762387-3762406 | None:intergenic | 60.0% | |
| GAGGGCTATGGGGCAGTTCA+CGG | + | chr8.4:3766070-3766089 | MS.gene58078:CDS | 60.0% | |
| TCGCCAAGGGCAACAGGTCA+GGG | - | chr8.4:3766744-3766763 | None:intergenic | 60.0% | |
| TGACCTGTTGCCCTTGGCGA+TGG | + | chr8.4:3766744-3766763 | MS.gene58078:intron | 60.0% | |
| TTCGACTGCTGACGGAGCAC+TGG | + | chr8.4:3764631-3764650 | MS.gene58078:CDS | 60.0% | |
| TTGCCATCGCCAAGGGCAAC+AGG | - | chr8.4:3766750-3766769 | None:intergenic | 60.0% | |
| ! | AGCACTGGAGGCAGCTCCTG+CGG | + | chr8.4:3764646-3764665 | MS.gene58078:CDS | 65.0% |
| !! | GACTGCTGACGGAGCACTGG+AGG | + | chr8.4:3764634-3764653 | MS.gene58078:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 3762284 | 3767092 | 3762284 | ID=MS.gene58078 |
| chr8.4 | mRNA | 3762284 | 3767092 | 3762284 | ID=MS.gene58078.t1;Parent=MS.gene58078 |
| chr8.4 | exon | 3762284 | 3762526 | 3762284 | ID=MS.gene58078.t1.exon1;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3762284 | 3762526 | 3762284 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| chr8.4 | exon | 3762622 | 3762735 | 3762622 | ID=MS.gene58078.t1.exon2;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3762622 | 3762735 | 3762622 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| chr8.4 | exon | 3764200 | 3764265 | 3764200 | ID=MS.gene58078.t1.exon3;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3764200 | 3764265 | 3764200 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| chr8.4 | exon | 3764366 | 3764473 | 3764366 | ID=MS.gene58078.t1.exon4;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3764366 | 3764473 | 3764366 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| chr8.4 | exon | 3764584 | 3764667 | 3764584 | ID=MS.gene58078.t1.exon5;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3764584 | 3764667 | 3764584 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| chr8.4 | exon | 3765721 | 3765822 | 3765721 | ID=MS.gene58078.t1.exon6;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3765721 | 3765822 | 3765721 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| chr8.4 | exon | 3765978 | 3766091 | 3765978 | ID=MS.gene58078.t1.exon7;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3765978 | 3766091 | 3765978 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| chr8.4 | exon | 3766178 | 3766258 | 3766178 | ID=MS.gene58078.t1.exon8;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3766178 | 3766258 | 3766178 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| chr8.4 | exon | 3766443 | 3766562 | 3766443 | ID=MS.gene58078.t1.exon9;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3766443 | 3766562 | 3766443 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| chr8.4 | exon | 3766997 | 3767092 | 3766997 | ID=MS.gene58078.t1.exon10;Parent=MS.gene58078.t1 |
| chr8.4 | CDS | 3766997 | 3767092 | 3766997 | ID=cds.MS.gene58078.t1;Parent=MS.gene58078.t1 |
| Gene Sequence |
| Protein sequence |
