AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58154

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58154.t1 MTR_8g092140 96.170 235 8 1 1 235 1 234 7.54e-160 442
MS.gene58154.t1 MTR_3g095080 63.710 248 69 12 2 235 4 244 2.35e-86 256
MS.gene58154.t1 MTR_3g095080 59.919 247 56 11 2 235 4 220 3.46e-77 232
MS.gene58154.t1 MTR_3g095080 56.701 194 65 11 2 183 4 190 2.59e-47 155
MS.gene58154.t1 MTR_8g007270 57.343 143 50 3 85 227 89 220 2.32e-46 154
MS.gene58154.t1 MTR_5g043880 67.073 82 26 1 136 217 100 180 1.78e-32 119
MS.gene58154.t1 MTR_7g079010 57.303 89 34 2 132 217 110 197 8.35e-31 113
MS.gene58154.t1 MTR_1g086790 66.234 77 25 1 141 217 139 214 5.89e-30 114
MS.gene58154.t1 MTR_4g094588 69.444 72 21 1 146 217 164 234 7.57e-29 111
MS.gene58154.t1 MTR_2g033820 67.568 74 23 1 144 217 187 259 8.95e-29 112
MS.gene58154.t1 MTR_7g109800 56.566 99 39 3 119 217 107 201 1.05e-28 110
MS.gene58154.t1 MTR_3g056100 62.338 77 28 1 141 217 239 314 1.06e-28 112
MS.gene58154.t1 MTR_3g056100 56.140 57 24 1 161 217 99 154 1.65e-14 72.4
MS.gene58154.t1 MTR_3g056100 62.338 77 28 1 141 217 383 458 1.08e-28 113
MS.gene58154.t1 MTR_3g056100 56.140 57 24 1 161 217 243 298 9.17e-15 73.2
MS.gene58154.t1 MTR_5g094430 59.740 77 30 1 141 217 211 286 1.12e-28 112
MS.gene58154.t1 MTR_5g094430 53.125 64 26 2 161 221 66 128 8.75e-14 70.1
MS.gene58154.t1 MTR_3g056100 62.338 77 28 1 141 217 396 471 1.20e-28 113
MS.gene58154.t1 MTR_3g056100 56.140 57 24 1 161 217 243 298 9.24e-15 73.2
MS.gene58154.t1 MTR_3g031220 62.025 79 29 1 139 217 344 421 1.23e-28 112
MS.gene58154.t1 MTR_3g031220 56.140 57 24 1 161 217 198 253 1.39e-14 72.8
MS.gene58154.t1 MTR_3g056100 62.338 77 28 1 141 217 252 327 1.38e-28 112
MS.gene58154.t1 MTR_3g056100 56.140 57 24 1 161 217 99 154 1.73e-14 72.4
MS.gene58154.t1 MTR_5g094430 59.740 77 30 1 141 217 233 308 1.38e-28 112
MS.gene58154.t1 MTR_5g094430 53.125 64 26 2 161 221 88 150 7.72e-14 70.5
MS.gene58154.t1 MTR_5g094430 59.740 77 30 1 141 217 345 420 1.49e-28 113
MS.gene58154.t1 MTR_5g094430 53.125 64 26 2 161 221 200 262 5.46e-14 70.9
MS.gene58154.t1 MTR_3g104750 56.098 82 35 1 140 221 84 164 1.66e-28 106
MS.gene58154.t1 MTR_7g011820 49.565 115 53 3 104 217 356 466 1.93e-28 112
MS.gene58154.t1 MTR_7g011820 59.649 57 22 1 161 217 228 283 2.54e-16 77.8
MS.gene58154.t1 MTR_5g074400 63.636 77 27 1 141 217 401 476 3.99e-28 112
MS.gene58154.t1 MTR_5g074400 56.140 57 24 1 161 217 243 298 1.51e-14 72.8
MS.gene58154.t1 MTR_4g122530 66.216 74 24 1 144 217 192 264 1.19e-27 109
MS.gene58154.t1 MTR_5g091390 65.278 72 24 1 146 217 143 213 2.83e-27 106
MS.gene58154.t1 MTR_4g082580 41.538 130 63 2 113 233 221 346 5.94e-27 107
MS.gene58154.t1 MTR_4g082580 54.386 57 26 0 161 217 145 201 2.55e-15 74.7
MS.gene58154.t1 MTR_8g096730 40.000 115 63 2 125 234 30 143 8.24e-27 101
MS.gene58154.t1 MTR_5g042920 59.740 77 30 1 141 217 301 376 9.20e-27 107
MS.gene58154.t1 MTR_5g042920 45.745 94 44 4 143 232 134 224 2.65e-15 74.7
MS.gene58154.t1 MTR_3g009470 59.740 77 30 1 141 217 476 551 1.26e-26 107
MS.gene58154.t1 MTR_3g009470 56.140 57 24 1 161 217 280 335 4.46e-15 74.3
MS.gene58154.t1 MTR_7g080000 46.491 114 53 2 111 217 376 488 1.43e-26 107
MS.gene58154.t1 MTR_7g080000 52.381 63 29 1 159 221 232 293 1.31e-15 75.9
MS.gene58154.t1 MTR_7g028415 62.857 70 25 1 148 217 81 149 1.53e-26 101
MS.gene58154.t1 MTR_7g028710 62.857 70 25 1 148 217 81 149 1.53e-26 101
MS.gene58154.t1 MTR_1g015140 55.814 86 37 1 132 217 74 158 2.75e-26 100
MS.gene58154.t1 MTR_4g013260 57.500 80 33 1 138 217 314 392 4.68e-26 105
MS.gene58154.t1 MTR_4g013260 52.632 57 27 0 161 217 184 240 4.43e-15 74.3
MS.gene58154.t1 MTR_7g080020 52.381 84 39 1 134 217 467 549 1.86e-25 104
MS.gene58154.t1 MTR_7g080020 55.172 58 25 1 161 218 280 336 6.17e-16 77.0
MS.gene58154.t1 MTR_7g071120 57.143 77 32 1 141 217 305 380 1.26e-24 101
MS.gene58154.t1 MTR_7g071120 54.386 57 25 1 161 217 166 221 3.62e-14 71.6
MS.gene58154.t1 MTR_3g095040 58.442 77 30 2 146 221 104 179 7.71e-24 95.1
MS.gene58154.t1 MTR_7g100510 57.534 73 30 1 145 217 346 417 4.68e-23 97.1
MS.gene58154.t1 MTR_7g100510 57.143 56 23 1 162 217 190 244 1.45e-14 72.4
MS.gene58154.t1 MTR_1g077780 48.864 88 44 1 144 231 46 132 4.07e-22 89.0
MS.gene58154.t1 MTR_1g078260 43.519 108 46 2 140 232 212 319 5.95e-22 94.0
MS.gene58154.t1 MTR_7g062220 42.424 99 57 0 119 217 82 180 2.13e-21 90.9
MS.gene58154.t1 MTR_8g092010 53.521 71 32 1 147 217 95 164 4.41e-20 84.7
MS.gene58154.t1 MTR_5g097490 50.667 75 36 1 145 219 237 310 3.18e-19 85.9
MS.gene58154.t1 MTR_2g105060 47.436 78 39 2 142 217 74 151 4.18e-19 83.2
MS.gene58154.t1 MTR_2g105060 47.436 78 39 2 142 217 149 226 5.86e-19 84.3
MS.gene58154.t1 MTR_1g009613 38.095 126 66 4 99 218 201 320 6.14e-19 84.3
MS.gene58154.t1 MTR_2g088000 43.158 95 51 3 138 230 327 420 1.04e-18 84.7
MS.gene58154.t1 MTR_6g086555 47.945 73 36 2 146 217 192 263 1.41e-18 84.0
MS.gene58154.t1 MTR_3g108960 46.429 84 40 3 135 217 292 371 2.39e-18 83.2
MS.gene58154.t1 MTR_4g130900 48.052 77 39 1 141 217 340 415 2.56e-18 83.6
MS.gene58154.t1 MTR_4g094908 43.678 87 44 2 133 218 242 324 3.44e-18 82.4
MS.gene58154.t1 MTR_5g016610 43.820 89 45 2 133 220 175 259 4.47e-18 81.3
MS.gene58154.t1 MTR_4g107970 46.753 77 39 2 143 218 161 236 1.53e-17 81.3
MS.gene58154.t1 MTR_4g107970 46.753 77 39 2 143 218 238 313 2.17e-17 80.9
MS.gene58154.t1 MTR_4g132430 47.368 76 38 2 143 217 110 184 3.37e-17 79.7
MS.gene58154.t1 MTR_4g132430 47.368 76 38 2 143 217 244 318 7.07e-17 79.3
MS.gene58154.t1 MTR_7g110720 51.562 64 30 1 155 217 183 246 9.56e-17 79.0
MS.gene58154.t1 MTR_7g110720 51.562 64 30 1 155 217 210 273 1.01e-16 79.0
MS.gene58154.t1 MTR_2g023930 46.053 76 39 2 143 217 288 362 1.53e-16 78.6
MS.gene58154.t1 MTR_3g053330 44.156 77 41 2 143 218 234 309 2.09e-16 78.2
MS.gene58154.t1 MTR_4g127040 39.080 87 48 2 133 218 221 303 2.65e-16 77.0
MS.gene58154.t1 MTR_1g013760 52.632 57 26 1 162 217 141 197 3.74e-16 75.9
MS.gene58154.t1 MTR_0117s0040 51.613 62 29 1 157 217 70 131 3.86e-16 75.5
MS.gene58154.t1 MTR_7g009730 52.381 63 29 1 156 217 214 276 6.45e-16 76.6
MS.gene58154.t1 MTR_3g106060 50.000 60 29 1 160 218 137 196 1.03e-15 75.1
MS.gene58154.t1 MTR_5g067680 52.542 59 25 1 161 216 202 260 2.04e-15 74.7
MS.gene58154.t1 MTR_1g070455 38.824 85 47 2 135 218 271 351 2.07e-15 74.7
MS.gene58154.t1 MTR_4g049790 48.611 72 35 2 147 217 299 369 2.22e-15 75.1
MS.gene58154.t1 MTR_8g099350 52.308 65 28 1 161 222 132 196 3.69e-15 73.9
MS.gene58154.t1 MTR_3g090860 53.333 60 25 1 160 216 132 191 4.25e-15 73.6
MS.gene58154.t1 MTR_3g009470 56.140 57 24 1 161 217 280 335 5.18e-15 73.9
MS.gene58154.t1 MTR_3g031220 31.579 152 90 4 69 217 113 253 7.03e-15 73.2
MS.gene58154.t1 MTR_3g031220 62.791 43 15 1 139 181 344 385 2.90e-11 62.8
MS.gene58154.t1 MTR_2g045360 36.752 117 69 4 102 217 156 268 7.70e-15 73.2
MS.gene58154.t1 MTR_1g013790 43.077 65 36 1 159 222 99 163 8.94e-15 71.6
MS.gene58154.t1 MTR_4g007060 48.333 60 30 1 159 217 126 185 9.29e-15 72.0
MS.gene58154.t1 MTR_4g007060 48.333 60 30 1 159 217 160 219 1.06e-14 72.4
MS.gene58154.t1 MTR_4g094412 51.667 60 28 1 159 217 232 291 1.64e-14 72.4
MS.gene58154.t1 MTR_4g094412 51.667 60 28 1 159 217 241 300 1.89e-14 72.4
MS.gene58154.t1 MTR_8g028565 37.374 99 52 3 123 217 120 212 2.03e-14 71.6
MS.gene58154.t1 MTR_2g075750 48.333 60 28 1 159 215 26 85 2.20e-14 69.3
MS.gene58154.t1 MTR_2g032030 33.333 126 78 3 97 217 200 324 3.71e-14 71.6
MS.gene58154.t1 MTR_2g032030 33.333 126 78 3 97 217 200 324 3.81e-14 71.2
MS.gene58154.t1 MTR_7g073430 50.847 59 26 1 161 216 122 180 4.22e-14 70.1
MS.gene58154.t1 MTR_2g075610 48.333 60 28 1 159 215 27 86 4.27e-14 68.6
MS.gene58154.t1 MTR_2g075700 50.820 61 27 1 159 216 142 202 7.04e-14 70.1
MS.gene58154.t1 MTR_5g074200 52.632 57 26 1 161 217 220 275 2.27e-13 68.6
MS.gene58154.t1 MTR_2g075680 46.667 60 29 1 159 215 146 205 3.18e-13 68.2
MS.gene58154.t1 MTR_7g073380 40.476 84 40 3 143 216 98 181 3.54e-13 67.8
MS.gene58154.t1 MTR_7g117200 47.143 70 32 2 160 224 117 186 4.79e-13 67.8
MS.gene58154.t1 MTR_8g087000 48.276 58 29 1 162 218 78 135 4.91e-13 66.6
MS.gene58154.t1 MTR_8g087000 48.276 58 29 1 162 218 77 134 5.81e-13 66.6
MS.gene58154.t1 MTR_5g097500 42.667 75 42 1 145 219 215 288 6.43e-13 67.0
MS.gene58154.t1 MTR_4g049760 45.946 74 38 2 159 230 288 361 1.11e-12 67.0
MS.gene58154.t1 MTR_8g098945 47.692 65 32 2 155 217 122 186 1.20e-12 66.2
MS.gene58154.t1 MTR_2g016770 46.552 58 30 1 162 218 36 93 1.26e-12 65.1
MS.gene58154.t1 MTR_2g016770 46.552 58 30 1 162 218 28 85 1.47e-12 64.7
MS.gene58154.t1 MTR_2g024350 46.552 58 30 1 162 218 9 66 1.58e-12 65.1
MS.gene58154.t1 MTR_8g005750 45.763 59 29 1 161 216 103 161 1.81e-12 65.5
MS.gene58154.t1 MTR_7g079040 36.842 95 53 2 124 217 123 211 2.55e-12 65.5
MS.gene58154.t1 MTR_2g024380 46.552 58 30 1 162 218 252 309 2.73e-12 65.9
MS.gene58154.t1 MTR_0002s1250 44.828 58 29 1 161 215 111 168 3.34e-12 64.7
MS.gene58154.t1 MTR_8g027860 35.714 126 72 3 107 229 88 207 3.40e-12 65.5
MS.gene58154.t1 MTR_7g109600 49.123 57 28 1 162 217 54 110 9.05e-12 63.5
MS.gene58154.t1 MTR_2g075690 43.333 60 31 1 159 215 139 198 1.78e-11 63.2
MS.gene58154.t1 MTR_5g029850 44.118 68 37 1 110 177 1 67 1.96e-11 58.5
MS.gene58154.t1 MTR_8g067650 35.052 97 61 2 128 222 306 402 2.29e-11 63.2
MS.gene58154.t1 MTR_2g083870 46.552 58 30 1 162 218 81 138 2.41e-11 62.4
MS.gene58154.t1 MTR_8g032510 36.634 101 54 3 118 215 83 176 3.64e-11 62.0
MS.gene58154.t1 MTR_1g099600 36.264 91 51 2 129 218 159 243 5.23e-11 61.6
MS.gene58154.t1 MTR_8g067635 34.783 92 58 2 133 222 321 412 5.23e-11 62.4
MS.gene58154.t1 MTR_3g093830 42.424 66 30 2 162 219 128 193 5.54e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58154.t1 AT4G39410 72.000 125 23 3 122 235 181 304 5.49e-59 189
MS.gene58154.t1 AT2G44745 65.600 125 39 3 101 222 83 206 8.44e-48 157
MS.gene58154.t1 AT1G69310 65.060 83 28 1 135 217 122 203 2.23e-33 122
MS.gene58154.t1 AT1G69310 65.060 83 28 1 135 217 122 203 2.23e-33 122
MS.gene58154.t1 AT1G69310 65.060 83 28 1 135 217 122 203 2.23e-33 122
MS.gene58154.t1 AT1G64000 63.415 82 29 1 136 217 90 170 2.14e-30 112
MS.gene58154.t1 AT5G41570 61.176 85 32 1 133 217 71 154 2.16e-30 111
MS.gene58154.t1 AT2G46130 59.091 88 34 2 141 228 11 96 1.24e-29 107
MS.gene58154.t1 AT4G18170 65.854 82 26 2 141 221 153 233 1.86e-29 112
MS.gene58154.t1 AT5G49520 67.568 74 23 1 144 217 205 277 2.44e-29 113
MS.gene58154.t1 AT4G26640 55.435 92 33 2 133 217 171 261 4.40e-29 112
MS.gene58154.t1 AT4G26640 53.125 64 29 1 154 217 28 90 3.56e-14 71.2
MS.gene58154.t1 AT4G26640 55.435 92 33 2 133 217 171 261 4.40e-29 112
MS.gene58154.t1 AT4G26640 53.125 64 29 1 154 217 28 90 3.56e-14 71.2
MS.gene58154.t1 AT4G26640 55.435 92 33 2 133 217 171 261 4.40e-29 112
MS.gene58154.t1 AT4G26640 53.125 64 29 1 154 217 28 90 3.56e-14 71.2
MS.gene58154.t1 AT4G26640 55.435 92 33 2 133 217 171 261 4.40e-29 112
MS.gene58154.t1 AT4G26640 53.125 64 29 1 154 217 28 90 3.56e-14 71.2
MS.gene58154.t1 AT4G26640 55.435 92 33 2 133 217 307 397 6.00e-29 114
MS.gene58154.t1 AT4G26640 53.125 64 29 1 154 217 164 226 1.79e-14 72.4
MS.gene58154.t1 AT4G26640 55.435 92 33 2 133 217 275 365 7.37e-29 113
MS.gene58154.t1 AT4G26640 53.125 64 29 1 154 217 132 194 2.27e-14 72.0
MS.gene58154.t1 AT4G26640 55.435 92 33 2 133 217 347 437 7.43e-29 114
MS.gene58154.t1 AT4G26640 53.125 64 29 1 154 217 204 266 1.76e-14 72.4
MS.gene58154.t1 AT5G07100 50.000 110 44 2 108 217 192 290 2.68e-28 109
MS.gene58154.t1 AT5G07100 52.632 57 27 0 161 217 117 173 4.40e-14 70.5
MS.gene58154.t1 AT5G07100 50.000 110 44 2 108 217 99 197 3.67e-28 106
MS.gene58154.t1 AT5G07100 52.632 57 27 0 161 217 24 80 7.83e-14 68.6
MS.gene58154.t1 AT5G07100 50.000 110 44 2 108 217 99 197 3.67e-28 106
MS.gene58154.t1 AT5G07100 52.632 57 27 0 161 217 24 80 7.83e-14 68.6
MS.gene58154.t1 AT5G07100 50.000 110 44 2 108 217 99 197 3.67e-28 106
MS.gene58154.t1 AT5G07100 52.632 57 27 0 161 217 24 80 7.83e-14 68.6
MS.gene58154.t1 AT5G07100 50.000 110 44 2 108 217 99 197 3.67e-28 106
MS.gene58154.t1 AT5G07100 52.632 57 27 0 161 217 24 80 7.83e-14 68.6
MS.gene58154.t1 AT5G26170 64.000 75 26 1 147 221 100 173 4.42e-28 105
MS.gene58154.t1 AT1G69310 60.241 83 28 2 135 217 122 199 9.74e-28 107
MS.gene58154.t1 AT2G47260 60.465 86 32 2 132 217 147 230 1.64e-27 107
MS.gene58154.t1 AT1G29860 64.865 74 25 1 144 217 120 192 1.72e-27 106
MS.gene58154.t1 AT2G38470 63.636 77 27 1 141 217 343 418 2.29e-27 109
MS.gene58154.t1 AT2G38470 54.386 57 25 1 161 217 184 239 1.15e-13 70.1
MS.gene58154.t1 AT1G13960 61.039 77 29 1 141 217 390 465 3.51e-27 108
MS.gene58154.t1 AT1G13960 55.932 59 25 1 161 219 229 286 2.50e-15 75.1
MS.gene58154.t1 AT2G03340 44.737 114 62 1 104 217 359 471 3.53e-27 108
MS.gene58154.t1 AT2G03340 56.140 57 24 1 161 217 250 305 5.74e-14 70.9
MS.gene58154.t1 AT1G13960 61.039 77 29 1 141 217 237 312 5.27e-27 106
MS.gene58154.t1 AT1G13960 55.932 59 25 1 161 219 76 133 9.67e-15 72.8
MS.gene58154.t1 AT2G30250 63.636 77 27 1 141 217 309 384 5.44e-27 107
MS.gene58154.t1 AT2G30250 50.877 57 27 1 161 217 166 221 2.37e-11 63.2
MS.gene58154.t1 AT5G56270 61.039 77 29 1 141 217 468 543 8.22e-27 108
MS.gene58154.t1 AT5G56270 56.140 57 24 1 161 217 273 328 1.38e-15 75.9
MS.gene58154.t1 AT5G46350 65.278 72 24 1 146 217 169 239 1.49e-26 105
MS.gene58154.t1 AT3G01080 55.056 89 35 2 133 217 313 400 1.95e-26 106
MS.gene58154.t1 AT3G01080 56.140 57 24 1 161 217 205 260 2.25e-15 75.1
MS.gene58154.t1 AT3G01080 55.056 89 35 2 133 217 275 362 3.45e-26 105
MS.gene58154.t1 AT3G01080 56.140 57 24 1 161 217 167 222 4.41e-15 73.9
MS.gene58154.t1 AT5G13080 63.380 71 25 1 147 217 54 123 3.82e-26 99.4
MS.gene58154.t1 AT3G01970 54.444 90 37 2 147 233 52 140 4.79e-26 99.4
MS.gene58154.t1 AT4G26440 57.143 77 32 1 141 217 353 428 1.32e-24 102
MS.gene58154.t1 AT4G26440 56.897 58 24 1 161 218 178 234 6.15e-17 79.7
MS.gene58154.t1 AT2G46130 54.545 88 34 3 141 228 11 92 4.85e-24 92.8
MS.gene58154.t1 AT2G37260 62.500 64 24 0 154 217 260 323 6.54e-24 98.2
MS.gene58154.t1 AT2G37260 49.315 73 36 1 146 218 68 139 4.31e-14 70.9
MS.gene58154.t1 AT2G37260 62.500 64 24 0 154 217 262 325 6.57e-24 98.2
MS.gene58154.t1 AT2G37260 49.315 73 36 1 146 218 70 141 4.39e-14 70.9
MS.gene58154.t1 AT5G64810 39.844 128 70 2 90 217 46 166 8.51e-24 94.7
MS.gene58154.t1 AT2G37260 62.500 64 24 0 154 217 342 405 1.28e-23 98.6
MS.gene58154.t1 AT2G37260 49.315 73 36 1 146 218 150 221 5.09e-14 70.9
MS.gene58154.t1 AT3G62340 59.524 84 31 2 134 217 94 174 1.53e-23 95.9
MS.gene58154.t1 AT2G04880 32.727 220 106 9 5 217 155 339 1.22e-22 95.9
MS.gene58154.t1 AT2G04880 55.932 59 25 1 159 217 109 166 1.70e-14 72.4
MS.gene58154.t1 AT2G04880 36.420 162 75 6 63 217 223 363 1.16e-20 90.5
MS.gene58154.t1 AT2G04880 55.932 59 25 1 159 217 109 166 1.87e-14 72.4
MS.gene58154.t1 AT1G55600 45.882 85 46 0 133 217 279 363 1.20e-20 90.5
MS.gene58154.t1 AT2G21900 47.253 91 41 4 136 220 80 169 2.06e-19 83.2
MS.gene58154.t1 AT2G23320 47.126 87 41 2 133 218 216 298 7.36e-19 84.0
MS.gene58154.t1 AT4G31550 34.783 161 86 5 81 234 171 319 1.32e-18 83.6
MS.gene58154.t1 AT4G31550 35.404 161 86 5 81 234 171 320 1.34e-18 83.6
MS.gene58154.t1 AT5G43290 50.704 71 35 0 147 217 100 170 2.17e-18 82.0
MS.gene58154.t1 AT5G15130 48.052 77 38 2 143 218 168 243 3.59e-18 83.2
MS.gene58154.t1 AT5G15130 48.052 77 38 2 143 218 210 285 3.89e-18 83.2
MS.gene58154.t1 AT4G30935 54.839 62 28 0 156 217 326 387 7.28e-18 82.4
MS.gene58154.t1 AT2G25000 51.667 60 28 1 160 218 102 161 2.59e-17 78.2
MS.gene58154.t1 AT2G25000 51.667 60 28 1 160 218 102 161 2.59e-17 78.2
MS.gene58154.t1 AT4G31800 47.887 71 36 1 159 228 109 179 2.64e-17 78.6
MS.gene58154.t1 AT4G04450 35.772 123 66 2 96 217 145 255 2.84e-17 80.5
MS.gene58154.t1 AT2G25000 51.667 60 28 1 160 218 124 183 3.68e-17 78.2
MS.gene58154.t1 AT2G25000 51.667 60 28 1 160 218 145 204 5.42e-17 78.2
MS.gene58154.t1 AT4G31800 51.667 60 28 1 159 217 174 233 5.52e-17 78.6
MS.gene58154.t1 AT4G04450 35.772 123 66 2 96 217 239 349 7.38e-17 79.3
MS.gene58154.t1 AT2G30590 43.023 86 44 2 133 217 289 370 7.61e-17 79.0
MS.gene58154.t1 AT5G28650 41.379 87 46 2 133 218 238 320 8.58e-17 78.6
MS.gene58154.t1 AT1G80840 43.678 87 45 3 135 217 117 203 1.27e-16 77.8
MS.gene58154.t1 AT2G24570 41.509 106 52 3 113 217 204 300 2.60e-16 77.0
MS.gene58154.t1 AT1G62300 47.368 76 38 2 143 217 295 369 3.01e-16 77.8
MS.gene58154.t1 AT3G01080 56.140 57 24 1 161 217 205 260 5.58e-16 76.3
MS.gene58154.t1 AT4G22070 47.368 76 38 2 143 217 280 354 5.78e-16 77.0
MS.gene58154.t1 AT4G22070 47.368 76 38 2 143 217 280 354 5.78e-16 77.0
MS.gene58154.t1 AT4G22070 47.368 76 38 2 143 217 280 354 5.78e-16 77.0
MS.gene58154.t1 AT4G22070 47.368 76 38 2 143 217 280 354 5.78e-16 77.0
MS.gene58154.t1 AT3G04670 40.230 87 47 2 133 218 238 320 6.86e-16 75.9
MS.gene58154.t1 AT4G24240 40.230 87 47 2 133 218 257 339 9.48e-16 75.5
MS.gene58154.t1 AT4G01720 38.739 111 55 3 119 217 187 296 1.86e-15 75.5
MS.gene58154.t1 AT1G18860 51.667 60 28 1 159 217 237 296 6.33e-15 73.9
MS.gene58154.t1 AT4G01250 41.463 82 38 3 140 217 110 185 1.26e-14 72.0
MS.gene58154.t1 AT1G68150 39.216 102 53 3 121 217 195 292 1.61e-14 72.4
MS.gene58154.t1 AT1G66550 49.153 59 27 1 161 216 103 161 2.36e-14 70.5
MS.gene58154.t1 AT1G66550 49.153 59 27 1 161 216 108 166 3.29e-14 70.1
MS.gene58154.t1 AT1G66560 49.153 59 27 1 161 216 103 161 4.14e-14 70.1
MS.gene58154.t1 AT3G56400 37.349 83 43 2 143 216 96 178 5.77e-14 70.1
MS.gene58154.t1 AT2G34830 38.636 88 52 2 132 217 185 272 1.82e-13 69.3
MS.gene58154.t1 AT2G34830 38.636 88 52 2 132 217 194 281 1.87e-13 69.3
MS.gene58154.t1 AT5G01900 35.366 82 50 1 138 216 87 168 2.10e-13 68.2
MS.gene58154.t1 AT1G69810 44.156 77 40 3 143 217 128 203 3.24e-13 68.2
MS.gene58154.t1 AT1G29280 44.444 63 34 1 156 217 69 131 3.39e-13 67.4
MS.gene58154.t1 AT1G69810 44.156 77 40 3 143 217 186 261 3.72e-13 68.6
MS.gene58154.t1 AT1G30650 38.636 88 52 2 132 217 187 274 4.17e-13 68.2
MS.gene58154.t1 AT2G40740 29.787 188 112 7 37 215 54 230 4.43e-13 67.4
MS.gene58154.t1 AT2G40740 29.787 188 112 7 37 215 63 239 5.82e-13 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 400 467 1.25e-12 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.25e-12 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.26e-12 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.33e-12 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.34e-12 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.34e-12 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.35e-12 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.35e-12 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.35e-12 67.4
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.44e-12 67.4
MS.gene58154.t1 AT1G66600 47.458 59 28 1 160 215 102 160 1.45e-12 65.5
MS.gene58154.t1 AT5G52830 49.123 57 28 1 162 217 166 222 1.48e-12 66.6
MS.gene58154.t1 AT4G23550 44.262 61 33 1 158 217 137 197 2.02e-12 65.9
MS.gene58154.t1 AT4G12020 44.928 69 37 1 160 228 467 534 2.04e-12 66.6
MS.gene58154.t1 AT5G22570 46.552 58 28 1 162 216 111 168 1.16e-11 63.5
MS.gene58154.t1 AT1G80590 44.828 58 29 1 162 216 86 143 1.55e-11 62.4
MS.gene58154.t1 AT2G46400 36.471 85 51 1 134 215 77 161 2.29e-11 62.8
MS.gene58154.t1 AT5G24110 39.759 83 38 2 159 229 111 193 2.94e-11 62.4
MS.gene58154.t1 AT5G45050 47.368 57 29 1 162 217 1042 1098 7.97e-11 62.0
MS.gene58154.t1 AT2G40750 41.667 72 38 2 161 229 152 222 8.10e-11 61.2
MS.gene58154.t1 AT5G45050 47.368 57 29 1 162 217 1181 1237 8.87e-11 62.0
MS.gene58154.t1 AT5G45050 47.368 57 29 1 162 217 1153 1209 9.10e-11 62.0

Find 58 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCTAACTTTCCCTTCTT+TGG 0.155148 4.2:+9991921 MS.gene58154:CDS
ATATATATATAGGGCAATAT+TGG 0.271320 4.2:+9992440 MS.gene58154:intron
CTCAATCTGACAATTTCTTA+TGG 0.303911 4.2:+9993771 MS.gene58154:CDS
GATCATCATGATAATCATTT+GGG 0.306049 4.2:+9992516 MS.gene58154:CDS
AACCTAACTTTCCCTTCTTT+GGG 0.323054 4.2:+9991922 MS.gene58154:CDS
TTGAGGATTGGTTGTGAGTA+GGG 0.323819 4.2:-9992028 None:intergenic
TTGAGAGTCTTCAAGATCAT+TGG 0.350233 4.2:-9993747 None:intergenic
GAAGGGAAAGTTAGGTTTGT+TGG 0.351164 4.2:-9991916 None:intergenic
GGTTACAAGTGGAGGAAGTA+TGG 0.371030 4.2:+9992645 MS.gene58154:CDS
AGATCATCATGATAATCATT+TGG 0.374995 4.2:+9992515 MS.gene58154:CDS
GAATACCTCACTTCTAGCTT+TGG 0.383644 4.2:+9992060 MS.gene58154:CDS
TTTGAGGATTGGTTGTGAGT+AGG 0.394005 4.2:-9992029 None:intergenic
AAGGGAAAGTTAGGTTTGTT+GGG 0.400880 4.2:-9991915 None:intergenic
AATAATAGTGGTAAAAGAAA+TGG 0.401015 4.2:+9992489 MS.gene58154:CDS
TATGTGGTTATTACCATCCT+TGG 0.403815 4.2:-9993698 None:intergenic
TATATATATAGGGCAATATT+GGG 0.416994 4.2:+9992441 MS.gene58154:intron
AACCCAAAGAAGGGAAAGTT+AGG 0.429367 4.2:-9991924 None:intergenic
GGATCAGATTCCCACACAAA+TGG 0.430482 4.2:+9991879 MS.gene58154:CDS
GATCAGATTCCCACACAAAT+GGG 0.432708 4.2:+9991880 MS.gene58154:CDS
AGTAATTGCATGAATAATAG+TGG 0.478312 4.2:+9992477 MS.gene58154:CDS
CAACAACTTATTTGAGGAGG+AGG 0.479257 4.2:+9991858 MS.gene58154:CDS
GATTGATTGCAACCCAAAGA+AGG 0.483315 4.2:-9991934 None:intergenic
CATGAAAATGAAGAAAATGA+AGG 0.488233 4.2:+9992551 MS.gene58154:CDS
TACCTCACTTCTAGCTTTGG+AGG 0.489395 4.2:+9992063 MS.gene58154:CDS
AAAGTTAGGTTTGTTGGGAA+AGG 0.496923 4.2:-9991910 None:intergenic
TGTTGACAACAACTTATTTG+AGG 0.503431 4.2:+9991852 MS.gene58154:CDS
AGATGTAAGTGAAGAAGCTA+TGG 0.510048 4.2:-9991974 None:intergenic
TACATGTCTTCCTTCATATG+TGG 0.519036 4.2:-9993714 None:intergenic
ATGGTAATAACCACATATGA+AGG 0.520270 4.2:+9993704 MS.gene58154:CDS
CAATGGATCTATGCAAGGAT+AGG 0.526046 4.2:-9992098 None:intergenic
ATGAAAATGAAGAAAATGAA+GGG 0.532779 4.2:+9992552 MS.gene58154:CDS
TGAAGAAGCTATGGAACTGA+AGG 0.544848 4.2:-9991965 None:intergenic
GTCTCACCATGGATTTACAA+TGG 0.548992 4.2:-9992115 None:intergenic
GATGTGGATGTGTTGGATGA+TGG 0.559861 4.2:+9992624 MS.gene58154:CDS
AGGAATGAACCCCATTTGTG+TGG 0.571470 4.2:-9991890 None:intergenic
GAAAGAAAGTGAGAGAGCCT+AGG 0.575300 4.2:+9992577 MS.gene58154:CDS
GATCTATGCAAGGATAGGAA+TGG 0.576173 4.2:-9992093 None:intergenic
ATTGATTGCAACCCAAAGAA+GGG 0.576930 4.2:-9991933 None:intergenic
GAGTCTTCAAGATCATTGGA+TGG 0.577891 4.2:-9993743 None:intergenic
ATAGATCCATTGTAAATCCA+TGG 0.578759 4.2:+9992109 MS.gene58154:CDS
GAGTACTGATGTGGATGTGT+TGG 0.603265 4.2:+9992617 MS.gene58154:CDS
TAAAGAACACACAACATCCC+AGG 0.608791 4.2:+9992679 MS.gene58154:CDS
ATTTACAATGGATCTATGCA+AGG 0.612859 4.2:-9992103 None:intergenic
GGAATGAACCCCATTTGTGT+GGG 0.612916 4.2:-9991889 None:intergenic
AGCGCTTAGCTGAAGATCCA+AGG 0.615258 4.2:+9993681 MS.gene58154:CDS
TGACAACAACTTATTTGAGG+AGG 0.615553 4.2:+9991855 MS.gene58154:CDS
ATCATCATGATAATCATTTG+GGG 0.627967 4.2:+9992517 MS.gene58154:CDS
TGGATGATGGTTACAAGTGG+AGG 0.635586 4.2:+9992637 MS.gene58154:CDS
GACAATTCTCTTGTGTGCAA+CGG 0.637189 4.2:-9993640 None:intergenic
CTTAGCTGAAGATCCAAGGA+TGG 0.650835 4.2:+9993685 MS.gene58154:CDS
TCATCATGATAATCATTTGG+GGG 0.652014 4.2:+9992518 MS.gene58154:CDS
ATATATAGGGCAATATTGGG+AGG 0.658760 4.2:+9992444 MS.gene58154:intron
AATGTCTTGAAGCAAAACCT+AGG 0.659684 4.2:-9992594 None:intergenic
ATCAGATTCCCACACAAATG+GGG 0.662202 4.2:+9991881 MS.gene58154:CDS
TGTTGGATGATGGTTACAAG+TGG 0.666245 4.2:+9992634 MS.gene58154:CDS
TTGTCGTGTAAAGAAACGTG+TGG 0.671845 4.2:+9993658 MS.gene58154:CDS
CAAGACATTGAGTACTGATG+TGG 0.685676 4.2:+9992608 MS.gene58154:CDS
TTCCTCCAAAGCTAGAAGTG+AGG 0.687037 4.2:-9992065 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATTAAAATTAGAGA+CGG + chr4.2:9992191-9992210 MS.gene58154:intron 10.0%
!! GTTTCATATATATATATATA+GGG + chr4.2:9992431-9992450 MS.gene58154:intron 10.0%
!! TGTTTCATATATATATATAT+AGG + chr4.2:9992430-9992449 MS.gene58154:intron 10.0%
!! GATGAAAAAAATAATAATGA+AGG - chr4.2:9993251-9993270 None:intergenic 15.0%
!! TATATCAACTAAAAATTCAA+GGG + chr4.2:9992702-9992721 MS.gene58154:intron 15.0%
!! AAAATAAATTGAAGTAGCAA+CGG - chr4.2:9992318-9992337 None:intergenic 20.0%
!! AAATAATAATGAAGGAAAGA+AGG - chr4.2:9993243-9993262 None:intergenic 20.0%
!! AATAATAATGAAGGAAAGAA+GGG - chr4.2:9993242-9993261 None:intergenic 20.0%
!! AATAATAGTGGTAAAAGAAA+TGG + chr4.2:9992489-9992508 MS.gene58154:CDS 20.0%
!! ACATCAAATTTGGTAAAATA+TGG - chr4.2:9992236-9992255 None:intergenic 20.0%
!! ATATATATATAGGGCAATAT+TGG + chr4.2:9992440-9992459 MS.gene58154:intron 20.0%
!! ATGAAAATGAAGAAAATGAA+GGG + chr4.2:9992552-9992571 MS.gene58154:CDS 20.0%
!! ATTATATGAGACAATTAACT+TGG - chr4.2:9993592-9993611 None:intergenic 20.0%
!! GTATATCAACTAAAAATTCA+AGG + chr4.2:9992701-9992720 MS.gene58154:intron 20.0%
!! TATATATATAGATTGTCTGA+CGG + chr4.2:9992395-9992414 MS.gene58154:intron 20.0%
!! TATATATATAGGGCAATATT+GGG + chr4.2:9992441-9992460 MS.gene58154:intron 20.0%
!!! AATTTTTAGTTGATATACCT+GGG - chr4.2:9992699-9992718 None:intergenic 20.0%
!!! ATTAATTCTTTGTGTTTTGA+AGG + chr4.2:9993524-9993543 MS.gene58154:intron 20.0%
!!! GTTTTTAACGTACTTTATTT+TGG + chr4.2:9993551-9993570 MS.gene58154:intron 20.0%
!!! TACTGTAATATTTAGAGTTA+CGG - chr4.2:9992864-9992883 None:intergenic 20.0%
! ACTCTATACTTAACATTTGA+GGG - chr4.2:9993440-9993459 None:intergenic 25.0%
! AGATCATCATGATAATCATT+TGG + chr4.2:9992515-9992534 MS.gene58154:CDS 25.0%
! AGTAATTGCATGAATAATAG+TGG + chr4.2:9992477-9992496 MS.gene58154:CDS 25.0%
! ATATATATAGATTGTCTGAC+GGG + chr4.2:9992396-9992415 MS.gene58154:intron 25.0%
! ATCATCATGATAATCATTTG+GGG + chr4.2:9992517-9992536 MS.gene58154:CDS 25.0%
! ATGGTCAAATGTAGTTATTA+TGG + chr4.2:9992894-9992913 MS.gene58154:intron 25.0%
! ATTACAGTATCCATGAAAAA+TGG + chr4.2:9992875-9992894 MS.gene58154:intron 25.0%
! CATGAAAATGAAGAAAATGA+AGG + chr4.2:9992551-9992570 MS.gene58154:CDS 25.0%
! GAGACGGAAAAATTAATATT+TGG + chr4.2:9992207-9992226 MS.gene58154:intron 25.0%
! GATCATCATGATAATCATTT+GGG + chr4.2:9992516-9992535 MS.gene58154:CDS 25.0%
! TACTCTATACTTAACATTTG+AGG - chr4.2:9993441-9993460 None:intergenic 25.0%
! TGGTCAAATGTAGTTATTAT+GGG + chr4.2:9992895-9992914 MS.gene58154:intron 25.0%
!! ATATGCAAAAGAAACTTGTT+CGG + chr4.2:9993367-9993386 MS.gene58154:intron 25.0%
!! CTTCATTTTCTTCATTTTCA+TGG - chr4.2:9992553-9992572 None:intergenic 25.0%
!!! ACTGATTAGCTTTAATTTAC+TGG + chr4.2:9993274-9993293 MS.gene58154:intron 25.0%
!!! AGGTATTCTTTTGATTTTTG+AGG - chr4.2:9992048-9992067 None:intergenic 25.0%
!!! GAATTTTTAGTTGATATACC+TGG - chr4.2:9992700-9992719 None:intergenic 25.0%
!!! TTCTTTTGATTTTTGAGGAT+TGG - chr4.2:9992043-9992062 None:intergenic 25.0%
AATAGCCATACATCACATAA+AGG - chr4.2:9993503-9993522 None:intergenic 30.0%
ATAGATCCATTGTAAATCCA+TGG + chr4.2:9992109-9992128 MS.gene58154:CDS 30.0%
ATGGTAATAACCACATATGA+AGG + chr4.2:9993704-9993723 MS.gene58154:CDS 30.0%
ATTTACAATGGATCTATGCA+AGG - chr4.2:9992106-9992125 None:intergenic 30.0%
CTAATGTAATCTCTAAGTGT+TGG - chr4.2:9992261-9992280 None:intergenic 30.0%
CTCAATCTGACAATTTCTTA+TGG + chr4.2:9993771-9993790 MS.gene58154:CDS 30.0%
GGTCAAATGTAGTTATTATG+GGG + chr4.2:9992896-9992915 MS.gene58154:intron 30.0%
TCATCATGATAATCATTTGG+GGG + chr4.2:9992518-9992537 MS.gene58154:CDS 30.0%
TGTTGACAACAACTTATTTG+AGG + chr4.2:9991852-9991871 MS.gene58154:CDS 30.0%
!! CTACATTTGACCATTTTTCA+TGG - chr4.2:9992888-9992907 None:intergenic 30.0%
!! TAGCTTTAATTTACTGGCTT+CGG + chr4.2:9993280-9993299 MS.gene58154:intron 30.0%
!!! AGAATTTTTCAAGACACATG+TGG - chr4.2:9993154-9993173 None:intergenic 30.0%
AAACCTAACTTTCCCTTCTT+TGG + chr4.2:9991921-9991940 MS.gene58154:CDS 35.0%
AACCTAACTTTCCCTTCTTT+GGG + chr4.2:9991922-9991941 MS.gene58154:CDS 35.0%
AATGTCTTGAAGCAAAACCT+AGG - chr4.2:9992597-9992616 None:intergenic 35.0%
AGATGTAAGTGAAGAAGCTA+TGG - chr4.2:9991977-9991996 None:intergenic 35.0%
AGCATAGCTCATGTAAGTTT+GGG - chr4.2:9992996-9993015 None:intergenic 35.0%
ATATATAGGGCAATATTGGG+AGG + chr4.2:9992444-9992463 MS.gene58154:intron 35.0%
ATTGATTGCAACCCAAAGAA+GGG - chr4.2:9991936-9991955 None:intergenic 35.0%
CAAATGTAGTTATTATGGGG+TGG + chr4.2:9992899-9992918 MS.gene58154:intron 35.0%
CTATTTGTCACAATTCAAGG+AGG + chr4.2:9993078-9993097 MS.gene58154:intron 35.0%
GACAAATAGTGCATTGTGAT+TGG - chr4.2:9993067-9993086 None:intergenic 35.0%
GAGAGAGAACATATGTAAGT+TGG - chr4.2:9993208-9993227 None:intergenic 35.0%
GCACTATTTGTCACAATTCA+AGG + chr4.2:9993075-9993094 MS.gene58154:intron 35.0%
TACATGTCTTCCTTCATATG+TGG - chr4.2:9993717-9993736 None:intergenic 35.0%
TAGCATAGCTCATGTAAGTT+TGG - chr4.2:9992997-9993016 None:intergenic 35.0%
TATGTGGTTATTACCATCCT+TGG - chr4.2:9993701-9993720 None:intergenic 35.0%
TGACAACAACTTATTTGAGG+AGG + chr4.2:9991855-9991874 MS.gene58154:CDS 35.0%
TGTGGCTGAAAAATAGTAAG+TGG + chr4.2:9993101-9993120 MS.gene58154:intron 35.0%
TTGAGAGTCTTCAAGATCAT+TGG - chr4.2:9993750-9993769 None:intergenic 35.0%
TTGCATATGCATGTAGTGAA+AGG - chr4.2:9993355-9993374 None:intergenic 35.0%
! AAGGGAAAGTTAGGTTTGTT+GGG - chr4.2:9991918-9991937 None:intergenic 35.0%
! AGTGTTGGAGACATCAAATT+TGG - chr4.2:9992246-9992265 None:intergenic 35.0%
!! AAAGTTAGGTTTGTTGGGAA+AGG - chr4.2:9991913-9991932 None:intergenic 35.0%
!! AGCTTTAATTTACTGGCTTC+GGG + chr4.2:9993281-9993300 MS.gene58154:intron 35.0%
!!! GAATTGTTTTTGTCTCACCA+TGG - chr4.2:9992129-9992148 None:intergenic 35.0%
AACCCAAAGAAGGGAAAGTT+AGG - chr4.2:9991927-9991946 None:intergenic 40.0%
AGGAAAAGTGATCACATGTG+AGG - chr4.2:9993473-9993492 None:intergenic 40.0%
ATCAGATTCCCACACAAATG+GGG + chr4.2:9991881-9991900 MS.gene58154:CDS 40.0%
ATGTAGTTATTATGGGGTGG+AGG + chr4.2:9992902-9992921 MS.gene58154:intron 40.0%
CAACAACTTATTTGAGGAGG+AGG + chr4.2:9991858-9991877 MS.gene58154:CDS 40.0%
CAATGGATCTATGCAAGGAT+AGG - chr4.2:9992101-9992120 None:intergenic 40.0%
GAAGGGAAAGTTAGGTTTGT+TGG - chr4.2:9991919-9991938 None:intergenic 40.0%
GACAATTCTCTTGTGTGCAA+CGG - chr4.2:9993643-9993662 None:intergenic 40.0%
GAGTCTTCAAGATCATTGGA+TGG - chr4.2:9993746-9993765 None:intergenic 40.0%
GATCAGATTCCCACACAAAT+GGG + chr4.2:9991880-9991899 MS.gene58154:CDS 40.0%
GATCTATGCAAGGATAGGAA+TGG - chr4.2:9992096-9992115 None:intergenic 40.0%
GATTGATTGCAACCCAAAGA+AGG - chr4.2:9991937-9991956 None:intergenic 40.0%
GTCTCACCATGGATTTACAA+TGG - chr4.2:9992118-9992137 None:intergenic 40.0%
GTGGACCTTTATGTGATGTA+TGG + chr4.2:9993495-9993514 MS.gene58154:intron 40.0%
TAAAGAACACACAACATCCC+AGG + chr4.2:9992679-9992698 MS.gene58154:CDS 40.0%
TAATGAAGGAAAGAAGGGTG+TGG - chr4.2:9993237-9993256 None:intergenic 40.0%
TGAAGAAGCTATGGAACTGA+AGG - chr4.2:9991968-9991987 None:intergenic 40.0%
TTGTCGTGTAAAGAAACGTG+TGG + chr4.2:9993658-9993677 MS.gene58154:CDS 40.0%
! GTTTGGGACACAATGAATCA+AGG - chr4.2:9992980-9992999 None:intergenic 40.0%
! TGTTGGATGATGGTTACAAG+TGG + chr4.2:9992634-9992653 MS.gene58154:CDS 40.0%
!! ATGTGATCACTTTTCCTAGG+TGG + chr4.2:9993476-9993495 MS.gene58154:intron 40.0%
!! CAAGACATTGAGTACTGATG+TGG + chr4.2:9992608-9992627 MS.gene58154:CDS 40.0%
!! CACATGTGATCACTTTTCCT+AGG + chr4.2:9993473-9993492 MS.gene58154:intron 40.0%
!! GAATACCTCACTTCTAGCTT+TGG + chr4.2:9992060-9992079 MS.gene58154:CDS 40.0%
!! TTAATTTACTGGCTTCGGGA+AGG + chr4.2:9993285-9993304 MS.gene58154:intron 40.0%
!! TTGAGGATTGGTTGTGAGTA+GGG - chr4.2:9992031-9992050 None:intergenic 40.0%
!! TTTGAGGATTGGTTGTGAGT+AGG - chr4.2:9992032-9992051 None:intergenic 40.0%
AGGAATGAACCCCATTTGTG+TGG - chr4.2:9991893-9991912 None:intergenic 45.0%
CATCACATAAAGGTCCACCT+AGG - chr4.2:9993493-9993512 None:intergenic 45.0%
CTTAGCTGAAGATCCAAGGA+TGG + chr4.2:9993685-9993704 MS.gene58154:CDS 45.0%
GAAAGAAAGTGAGAGAGCCT+AGG + chr4.2:9992577-9992596 MS.gene58154:CDS 45.0%
GATGTGGATGTGTTGGATGA+TGG + chr4.2:9992624-9992643 MS.gene58154:CDS 45.0%
GGAATGAACCCCATTTGTGT+GGG - chr4.2:9991892-9991911 None:intergenic 45.0%
GGATCAGATTCCCACACAAA+TGG + chr4.2:9991879-9991898 MS.gene58154:CDS 45.0%
GGTTACAAGTGGAGGAAGTA+TGG + chr4.2:9992645-9992664 MS.gene58154:CDS 45.0%
TGTCACAATTCAAGGAGGTG+TGG + chr4.2:9993083-9993102 MS.gene58154:intron 45.0%
TTCCTCCAAAGCTAGAAGTG+AGG - chr4.2:9992068-9992087 None:intergenic 45.0%
! TGGATGATGGTTACAAGTGG+AGG + chr4.2:9992637-9992656 MS.gene58154:CDS 45.0%
!! GAGTACTGATGTGGATGTGT+TGG + chr4.2:9992617-9992636 MS.gene58154:CDS 45.0%
!! TACCTCACTTCTAGCTTTGG+AGG + chr4.2:9992063-9992082 MS.gene58154:CDS 45.0%
!!! TTTTAATTTTTAACTTTTTT+TGG - chr4.2:9992178-9992197 None:intergenic 5.0%
AGCGCTTAGCTGAAGATCCA+AGG + chr4.2:9993681-9993700 MS.gene58154:CDS 50.0%
! GGAAAGAAGGGTGTGGAGAT+TGG - chr4.2:9993230-9993249 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 9991838 9993796 9991838 ID=MS.gene58154
chr4.2 mRNA 9991838 9993796 9991838 ID=MS.gene58154.t1;Parent=MS.gene58154
chr4.2 exon 9991838 9992130 9991838 ID=MS.gene58154.t1.exon1;Parent=MS.gene58154.t1
chr4.2 CDS 9991838 9992130 9991838 ID=cds.MS.gene58154.t1;Parent=MS.gene58154.t1
chr4.2 exon 9992452 9992700 9992452 ID=MS.gene58154.t1.exon2;Parent=MS.gene58154.t1
chr4.2 CDS 9992452 9992700 9992452 ID=cds.MS.gene58154.t1;Parent=MS.gene58154.t1
chr4.2 exon 9993631 9993796 9993631 ID=MS.gene58154.t1.exon3;Parent=MS.gene58154.t1
chr4.2 CDS 9993631 9993796 9993631 ID=cds.MS.gene58154.t1;Parent=MS.gene58154.t1
Gene Sequence

>MS.gene58154

ATGTCTCAAATTATTGTTGACAACAACTTATTTGAGGAGGAGGATCAGATTCCCACACAAATGGGGTTCATTCCTTTCCCAACAAACCTAACTTTCCCTTCTTTGGGTTGCAATCAATCTTTGAAAGCCTTCAGTTCCATAGCTTCTTCACTTACATCTGAATCAGATTCTACATCAAATCTAACACAAACCCTACTCACAACCAATCCTCAAAAATCAAAAGAATACCTCACTTCTAGCTTTGGAGGAAGTACTCCATTCCTATCCTTGCATAGATCCATTGTAAATCCATGGTGAGACAAAAACAATTCAATTCTCATATTTGTTTTATCATGTACCAAAAAAAGTTAAAAATTAAAATTAAAATTAGAGACGGAAAAATTAATATTTGGTTACCATATTTTACCAAATTTGATGTCTCCAACACTTAGAGATTACATTAGAGACATATTTCGTATTTTTTTCGTTTTTAAATTTCCGTTGCTACTTCAATTTATTTTAGCTAATTAGTTAATTAACTGTTTTTTCTTAATCTTGCTAAAGAGATGCTATTGCTATATATATATAGATTGTCTGACGGGTGTTGTAAATTTGTTTCATATATATATATATAGGGCAATATTGGGAGGAGAAGTAATAAGTAATTGCATGAATAATAGTGGTAAAAGAAATGGAGTAGATCATCATGATAATCATTTGGGGGTTTCTGCTACCATGAAAATGAAGAAAATGAAGGGAAGAAAGAAAGTGAGAGAGCCTAGGTTTTGCTTCAAGACATTGAGTACTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTATGGACAAAAAGTTGTAAAGAACACACAACATCCCAGGTATATCAACTAAAAATTCAAGGGTTCTCTTTTTTTGTCTTACTTTGATAATTACTCAATTAATGTTGTAATAATTGTCACATTTCATTTGAAAAAAAAAAATCAAAAAGTTTGTTGCTTTTAATTTTAATATAGTTTTAATTGATTTTTTTTCTTCTAACCGTAACTCTAAATATTACAGTATCCATGAAAAATGGTCAAATGTAGTTATTATGGGGTGGAGGAAGTGATAATTTGAAAGAATTAATATATTTGATTTGATACTATATATTGAAACCTTGATTCATTGTGTCCCAAACTTACATGAGCTATGCTATATCTCTAGAAAAAAAACATTAAGAATTCTTCAAGAATAAAAAGCAACCAATCACAATGCACTATTTGTCACAATTCAAGGAGGTGTGGCTGAAAAATAGTAAGTGGACAAATAAATCATGCAATTAAAACTTGCCACATGTGTCTTGAAAAATTCTTGATGCTATTTTTCTAGATAAATAGCATTTTCCAACTTACATATGTTCTCTCTCCAATCTCCACACCCTTCTTTCCTTCATTATTATTTTTTTCATCACAACTGATTAGCTTTAATTTACTGGCTTCGGGAAGGTTTTAATATTTCTCTGAGTAATAACGTAAAGATAATTAAAGATTCCTTTCACTACATGCATATGCAAAAGAAACTTGTTCGGAATGATACTAATTTGTCAATGTTATGAGTTATGACTAATAATTATGACCCTCAAATGTTAAGTATAGAGTATATATATATCCTCACATGTGATCACTTTTCCTAGGTGGACCTTTATGTGATGTATGGCTATTGATTAATTCTTTGTGTTTTGAAGGTTTTGTTTTTAACGTACTTTATTTTGGACTGCTGATTAATTACCAAGTTAATTGTCTCATATAATGAATATTAAAAATGTGTAGAAGCTATTACCGTTGCACACAAGAGAATTGTCGTGTAAAGAAACGTGTGGAGCGCTTAGCTGAAGATCCAAGGATGGTAATAACCACATATGAAGGAAGACATGTACATTCTCCATCCAATGATCTTGAAGACTCTCAAACTCAATCTGACAATTTCTTATGGTAG
Protein sequence

>MS.gene58154.t1

MSQIIVDNNLFEEEDQIPTQMGFIPFPTNLTFPSLGCNQSLKAFSSIASSLTSESDSTSNLTQTLLTTNPQKSKEYLTSSFGGSTPFLSLHRSIVNPWAILGGEVISNCMNNSGKRNGVDHHDNHLGVSATMKMKKMKGRKKVREPRFCFKTLSTDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQTQSDNFLW