AlfalfaGEDB | MS.gene58957

M. sativa cultivar XinJiangDaYe / MS.gene58957

KEGG: -
GO: -
PFAM: PF03140.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58957.t1	RHN73382.1	97.5	353	9	0	1	353	158	510	1.40E-199	705.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58957.t1	Q9SD53	25.8	329	205	8	1	303	136	451	7.1e-22	106.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58957.t1	G7IG49	97.5	353	9	0	1	353	158	510	1.0e-199	705.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050612	MS.gene58957	-0.805268	1.45E-49	-1.69E-46
MS.gene050904	MS.gene58957	-0.815513	8.89E-52	-1.69E-46
MS.gene055748	MS.gene58957	-0.805452	1.33E-49	-1.69E-46
MS.gene055751	MS.gene58957	-0.817662	2.94E-52	-1.69E-46
MS.gene05589	MS.gene58957	-0.815457	9.15E-52	-1.69E-46
MS.gene060762	MS.gene58957	-0.801868	7.35E-49	-1.69E-46
MS.gene061044	MS.gene58957	0.807192	5.70E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58957.t1	MTR_2g036320	97.450	353	9	0	1	353	158	510	0.0	726
MS.gene58957.t1	MTR_2g041180	80.229	349	68	1	1	348	141	489	0.0	587
MS.gene58957.t1	MTR_2g036310	97.403	154	4	0	150	303	1	154	3.03e-111	321
MS.gene58957.t1	MTR_5g016570	34.783	345	170	13	1	303	191	522	2.25e-39	146
MS.gene58957.t1	MTR_2g035640	33.677	291	162	11	22	303	76	344	9.64e-34	128
MS.gene58957.t1	MTR_5g086340	29.321	324	192	12	1	304	123	429	3.39e-30	120
MS.gene58957.t1	MTR_8g005235	28.750	320	202	9	1	299	118	432	1.06e-28	115
MS.gene58957.t1	MTR_6g011050	31.879	298	180	9	1	291	112	393	1.93e-28	114
MS.gene58957.t1	MTR_3g079390	29.305	331	198	14	1	306	129	448	4.19e-28	114
MS.gene58957.t1	MTR_8g005265	27.679	336	194	13	1	297	118	443	7.27e-28	113
MS.gene58957.t1	MTR_0209s0060	30.769	299	172	12	1	275	121	408	1.10e-27	112
MS.gene58957.t1	MTR_0209s0030	30.769	299	172	12	1	275	121	408	1.10e-27	112
MS.gene58957.t1	MTR_6g010890	30.769	325	191	15	1	306	115	424	2.77e-27	111
MS.gene58957.t1	MTR_6g010850	31.962	316	184	13	1	306	53	347	2.85e-27	110
MS.gene58957.t1	MTR_8g006525	28.213	319	200	11	1	301	119	426	1.12e-26	110
MS.gene58957.t1	MTR_0024s0080	30.769	312	189	10	1	306	114	404	1.52e-26	109
MS.gene58957.t1	MTR_6g011060	29.283	321	196	10	1	306	113	417	1.88e-26	109
MS.gene58957.t1	MTR_6g010810	29.022	317	192	12	1	306	112	406	2.43e-26	108
MS.gene58957.t1	MTR_6g009610	30.351	313	195	9	1	306	113	409	6.21e-26	107
MS.gene58957.t1	MTR_8g005285	26.111	360	203	11	2	300	131	488	9.99e-26	108
MS.gene58957.t1	MTR_6g010920	30.351	313	193	10	1	306	113	407	1.04e-25	107
MS.gene58957.t1	MTR_8g005295	25.532	376	199	11	2	300	131	502	1.32e-25	107
MS.gene58957.t1	MTR_6g009170	30.065	306	186	12	1	291	113	405	2.80e-25	106
MS.gene58957.t1	MTR_7g060020	28.254	315	195	11	1	304	130	424	6.91e-25	105
MS.gene58957.t1	MTR_8g005225	25.893	336	210	9	1	307	127	452	8.08e-25	105
MS.gene58957.t1	MTR_8g005325	27.586	319	208	8	1	299	147	462	8.50e-25	105
MS.gene58957.t1	MTR_8g042830	29.836	305	167	11	31	303	120	409	1.45e-24	103
MS.gene58957.t1	MTR_7g060115	28.144	334	195	13	1	304	126	444	2.28e-24	103
MS.gene58957.t1	MTR_3g107590	31.046	306	180	11	1	291	116	405	9.30e-24	101
MS.gene58957.t1	MTR_7g059540	27.362	307	171	11	38	303	167	462	2.63e-22	97.8
MS.gene58957.t1	MTR_6g009590	28.889	315	197	12	1	306	113	409	3.52e-22	97.1
MS.gene58957.t1	MTR_7g060160	27.500	320	188	12	1	304	105	396	3.57e-22	97.1
MS.gene58957.t1	MTR_7g059540	27.129	317	169	11	38	303	166	471	9.19e-22	96.3
MS.gene58957.t1	MTR_5g087580	29.817	218	130	7	102	304	2	211	2.57e-21	91.3
MS.gene58957.t1	MTR_7g060260	29.183	257	168	8	1	253	127	373	4.10e-21	94.4
MS.gene58957.t1	MTR_7g060310	33.333	177	109	7	130	303	313	483	7.74e-21	94.0
MS.gene58957.t1	MTR_5g086260	36.111	180	99	9	130	304	137	305	2.39e-20	90.5
MS.gene58957.t1	MTR_7g060840	26.214	309	212	10	1	303	130	428	2.52e-20	92.0
MS.gene58957.t1	MTR_7g011980	28.155	309	155	12	1	306	96	340	1.26e-19	89.0
MS.gene58957.t1	MTR_7g059520	30.114	176	110	4	129	303	5	168	1.28e-19	85.5
MS.gene58957.t1	MTR_8g037923	29.902	204	125	6	118	306	269	469	2.47e-19	89.4
MS.gene58957.t1	MTR_7g059525	31.606	193	124	7	114	303	92	279	7.31e-19	85.9
MS.gene58957.t1	MTR_7g059510	27.322	183	120	6	130	311	251	421	3.56e-17	82.4
MS.gene58957.t1	MTR_8g037920	29.834	181	111	5	139	306	231	408	4.81e-17	82.0
MS.gene58957.t1	MTR_8g042170	26.923	338	204	13	1	303	124	453	8.25e-17	81.6
MS.gene58957.t1	MTR_7g059480	29.944	177	115	6	130	303	599	769	3.65e-16	80.1
MS.gene58957.t1	MTR_7g060320	24.306	288	169	7	1	247	127	406	8.01e-16	78.6
MS.gene58957.t1	MTR_6g009580	30.583	206	131	6	92	291	20	219	1.74e-15	75.5
MS.gene58957.t1	MTR_8g042400	26.331	338	199	13	1	303	18	340	3.97e-15	75.9
MS.gene58957.t1	MTR_4g015410	25.490	255	143	6	1	242	59	279	6.76e-15	75.5
MS.gene58957.t1	MTR_7g060080	26.519	181	118	4	130	304	17	188	4.05e-14	70.5
MS.gene58957.t1	MTR_7g060330	29.070	172	105	5	121	285	305	466	4.27e-14	73.6
MS.gene58957.t1	MTR_4g112660	25.260	289	175	12	39	304	90	360	1.74e-11	65.1
MS.gene58957.t1	MTR_7g446270	27.848	158	108	4	130	285	310	463	1.90e-11	65.5
MS.gene58957.t1	MTR_7g060370	31.148	122	80	3	121	241	288	406	9.29e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58957.t1	AT3G50120	33.041	342	177	11	1	303	191	519	1.54e-45	163
MS.gene58957.t1	AT3G50160	32.710	321	175	9	1	303	192	489	2.22e-42	154
MS.gene58957.t1	AT3G50170	30.746	335	192	6	1	303	201	527	4.77e-42	154
MS.gene58957.t1	AT3G50150	31.707	328	190	9	1	303	179	497	4.83e-41	150
MS.gene58957.t1	AT3G50140	31.858	339	185	10	1	304	201	528	5.64e-41	151
MS.gene58957.t1	AT3G50130	33.333	318	168	12	1	284	227	534	9.05e-41	150
MS.gene58957.t1	AT3G50180	31.579	323	189	9	1	303	266	576	2.25e-39	147
MS.gene58957.t1	AT2G36430	29.470	302	176	7	1	290	134	410	1.40e-34	132
MS.gene58957.t1	AT3G50190	29.641	334	168	10	1	303	184	481	6.84e-34	130
MS.gene58957.t1	AT5G11290	31.562	320	183	14	1	306	52	349	8.41e-30	117
MS.gene58957.t1	AT5G11290	31.481	324	178	14	1	306	121	418	2.52e-29	117
MS.gene58957.t1	AT4G31980	31.402	328	171	15	1	306	381	676	1.06e-26	111
MS.gene58957.t1	AT5G22540	29.043	303	175	10	1	282	122	405	1.35e-26	110
MS.gene58957.t1	AT5G22550	28.453	362	180	11	1	303	137	478	1.43e-26	110
MS.gene58957.t1	AT3G47200	26.205	332	206	9	1	306	136	454	2.78e-25	106
MS.gene58957.t1	AT3G47200	26.205	332	206	9	1	306	136	454	2.78e-25	106
MS.gene58957.t1	AT5G22550	28.308	325	168	9	29	303	120	429	2.44e-24	103
MS.gene58957.t1	AT3G47250	26.590	346	182	14	1	303	152	468	8.67e-23	99.4
MS.gene58957.t1	AT3G47250	26.590	346	182	14	1	303	152	468	8.67e-23	99.4
MS.gene58957.t1	AT3G47250	26.590	346	182	14	1	303	152	468	8.67e-23	99.4
MS.gene58957.t1	AT3G44710	27.072	362	197	15	1	303	139	492	1.43e-22	99.0
MS.gene58957.t1	AT3G47210	28.082	292	180	9	1	276	181	458	1.28e-20	93.2
MS.gene58957.t1	AT2G44930	26.370	292	187	9	31	313	229	501	6.81e-18	85.1
MS.gene58957.t1	AT2G28580	25.857	321	204	10	1	306	145	446	4.82e-17	82.4
MS.gene58957.t1	AT2G28580	25.857	321	204	10	1	306	196	497	4.93e-17	82.4
MS.gene58957.t1	AT2G28580	25.857	321	204	10	1	306	210	511	5.11e-17	82.4
MS.gene58957.t1	AT2G28580	25.857	321	204	10	1	306	227	528	5.25e-17	82.4
MS.gene58957.t1	AT2G28580	25.857	321	204	10	1	306	213	514	5.89e-17	82.4
MS.gene58957.t1	AT1G67150	24.762	315	215	7	1	310	112	409	6.31e-17	81.6
MS.gene58957.t1	AT1G67150	24.762	315	215	7	1	310	108	405	6.54e-17	81.6
MS.gene58957.t1	AT1G67150	24.762	315	215	7	1	310	108	405	6.54e-17	81.6
MS.gene58957.t1	AT5G22560	30.811	185	120	4	126	308	333	511	2.92e-16	80.1
MS.gene58957.t1	AT1G67150	26.289	194	134	3	119	310	176	362	9.71e-14	72.0
MS.gene58957.t1	AT3G60470	27.273	187	127	3	128	313	362	540	5.29e-13	70.5
MS.gene58957.t1	AT3G50140	31.818	220	94	10	1	180	201	404	1.46e-12	68.6
MS.gene58957.t1	AT1G65985	25.077	323	188	10	1	286	122	427	1.87e-12	68.6
MS.gene58957.t1	AT1G65985	25.077	323	188	10	1	286	122	427	1.87e-12	68.6
MS.gene58957.t1	AT3G02645	27.059	170	116	5	118	285	335	498	4.52e-11	64.3
MS.gene58957.t1	AT3G44695	29.496	139	91	2	126	263	26	158	5.29e-11	62.0

Find 62 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGTAAGATGTTTGACATTC+AGG	0.198145	2.1:-54100205	None:intergenic
TTCTACATTAGGTGCTCTTT+TGG	0.234967	2.1:+54100798	MS.gene58957:CDS
GTTTCTGCTCTTCATTATAA+AGG	0.240286	2.1:+54100577	MS.gene58957:CDS
GGGGTTATTCATCATTCTTT+AGG	0.242640	2.1:+54100598	MS.gene58957:CDS
GAATGAGGCGAATGAGTATT+TGG	0.255846	2.1:+54100708	MS.gene58957:CDS
GGGTTATTCATCATTCTTTA+GGG	0.310913	2.1:+54100599	MS.gene58957:CDS
GGTTCATCGCCAATGAGTTT+TGG	0.314160	2.1:-54100274	None:intergenic
GCTGTGGGACTTTCTACATT+AGG	0.320053	2.1:+54100787	MS.gene58957:CDS
TCAACTCTTGAGGGATTTAT+CGG	0.321114	2.1:+54099967	MS.gene58957:CDS
CGCAGATGCGGCCACAAAAC+TGG	0.328295	2.1:+54100858	MS.gene58957:CDS
TTTCTGCTCTTCATTATAAA+GGG	0.340065	2.1:+54100578	MS.gene58957:CDS
CGAATGAGTATTTGGGTTGT+TGG	0.373117	2.1:+54100716	MS.gene58957:CDS
TTCATAACTATTTAACAAGT+TGG	0.374858	2.1:+54100764	MS.gene58957:CDS
ATGTGAGAGTAGAGAATTGA+TGG	0.385474	2.1:+54100366	MS.gene58957:CDS
AACATGTAAGTTGTCATGTC+TGG	0.395638	2.1:-54100520	None:intergenic
ATGTCCCTTCTCTTAGTAGA+TGG	0.408713	2.1:+54100005	MS.gene58957:CDS
CTAAAGATGATGTTGGTTGA+TGG	0.412603	2.1:+54099932	None:intergenic
CTTTCATCATTCAACTCTTG+AGG	0.425935	2.1:+54099957	MS.gene58957:CDS
TCATAACTATTTAACAAGTT+GGG	0.427859	2.1:+54100765	MS.gene58957:CDS
TTTCATCATTCAACTCTTGA+GGG	0.437338	2.1:+54099958	MS.gene58957:CDS
GAATTGATGGATATAAGCTT+TGG	0.438622	2.1:+54100379	MS.gene58957:CDS
CTGTTATTGAATGAATCATC+TGG	0.448256	2.1:-54100312	None:intergenic
AAATATGACTCATTCATATC+AGG	0.451344	2.1:-54100673	None:intergenic
ACATTCATACAAGCAATTTG+TGG	0.457544	2.1:+54100832	MS.gene58957:CDS
TTAAAACAAACATTGGAAGT+TGG	0.469815	2.1:-54100069	None:intergenic
ATCTGGCTCTGACATCCTCT+TGG	0.471786	2.1:-54100295	None:intergenic
TGTAAGATGTTTGACATTCA+GGG	0.475505	2.1:-54100204	None:intergenic
TAGTGAGGAGGGTCACGAAA+TGG	0.476986	2.1:-54100925	None:intergenic
AATGAGGCGAATGAGTATTT+GGG	0.483613	2.1:+54100709	MS.gene58957:CDS
AACATAAGGCCAAAACTCAT+TGG	0.488726	2.1:+54100265	MS.gene58957:CDS
CTATTTAACAAGTTGGGCTG+TGG	0.493873	2.1:+54100771	MS.gene58957:CDS
GTGATTCGGATTGAAGCAAT+TGG	0.493971	2.1:-54100174	None:intergenic
TCAATAACAGAACTAAAAGA+AGG	0.500585	2.1:+54100325	MS.gene58957:CDS
TTTGTACAAAGTTGTGAATG+AGG	0.515890	2.1:+54100693	MS.gene58957:CDS
AATAACAGAACTAAAAGAAG+GGG	0.518306	2.1:+54100327	MS.gene58957:CDS
ATCTTCTAAGATACAACATA+AGG	0.520165	2.1:+54100251	MS.gene58957:CDS
ACTATTCCACCTTTGTACAT+TGG	0.522239	2.1:+54100433	MS.gene58957:CDS
TATTTAACAAGTTGGGCTGT+GGG	0.523702	2.1:+54100772	MS.gene58957:CDS
AGATTGTAGAAACTCATTTG+TGG	0.537808	2.1:-54100133	None:intergenic
CAGACTCATAAATTCAGCTC+AGG	0.541369	2.1:+54100552	MS.gene58957:CDS
TGAGTTTCTAAAGATGATGT+TGG	0.541707	2.1:+54099925	None:intergenic
CAATAACAGAACTAAAAGAA+GGG	0.545073	2.1:+54100326	MS.gene58957:CDS
TATAATCAAACTTCTTATCA+CGG	0.551075	2.1:-54100899	None:intergenic
CATTATCATCTCACGACGAA+TGG	0.563016	2.1:-54100038	None:intergenic
ATCATCTCACGACGAATGGT+TGG	0.563889	2.1:-54100034	None:intergenic
AACATCCATCTACTAAGAGA+AGG	0.582782	2.1:-54100010	None:intergenic
AAAATGGGGAGTTATGGTAA+AGG	0.589161	2.1:+54100405	MS.gene58957:CDS
TCAATTATTAGAACCATGGT+CGG	0.594382	2.1:-54100977	None:intergenic
CGAATACTGTATAGTGAGGA+GGG	0.595728	2.1:-54100936	None:intergenic
TTCTGCTCTTCATTATAAAG+GGG	0.596772	2.1:+54100579	MS.gene58957:CDS
AATTTGTGGTTTCGCAGATG+CGG	0.598387	2.1:+54100846	MS.gene58957:CDS
GTAAGATGTTTGACATTCAG+GGG	0.605692	2.1:-54100203	None:intergenic
ATGTTCAATTATTAGAACCA+TGG	0.614885	2.1:-54100981	None:intergenic
ACATCCATCTACTAAGAGAA+GGG	0.621177	2.1:-54100009	None:intergenic
TCGAATACTGTATAGTGAGG+AGG	0.622350	2.1:-54100937	None:intergenic
TGATCACCAATGTACAAAGG+TGG	0.628498	2.1:-54100439	None:intergenic
TCGTCGAATACTGTATAGTG+AGG	0.667013	2.1:-54100940	None:intergenic
CTGTGATCACCAATGTACAA+AGG	0.674690	2.1:-54100442	None:intergenic
CTCATTGGCGATGAACCAAG+AGG	0.690943	2.1:+54100280	MS.gene58957:CDS
ATAACAGAACTAAAAGAAGG+GGG	0.703676	2.1:+54100328	MS.gene58957:CDS
AGGGAGTGATGAACACGTCG+CGG	0.709626	2.1:+54100618	MS.gene58957:CDS
TTGTACATTGGTGATCACAG+AGG	0.731202	2.1:+54100445	MS.gene58957:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATAATCAAACTTCTTATCA+CGG	-	chr2.1:54100902-54100921	None:intergenic	20.0%
!!	TCATAACTATTTAACAAGTT+GGG	+	chr2.1:54100765-54100784	MS.gene58957:CDS	20.0%
!!	TTCATAACTATTTAACAAGT+TGG	+	chr2.1:54100764-54100783	MS.gene58957:CDS	20.0%
!!!	AGTTTTGTTAAAACAAACAT+TGG	-	chr2.1:54100079-54100098	None:intergenic	20.0%
!!!	ATATAAGCTTTGGAAAAAAA+TGG	+	chr2.1:54100389-54100408	MS.gene58957:CDS	20.0%
!!!	ATGAAGACTATTGTTTTTAT+CGG	-	chr2.1:54100113-54100132	None:intergenic	20.0%
!!!	TATAAGCTTTGGAAAAAAAT+GGG	+	chr2.1:54100390-54100409	MS.gene58957:CDS	20.0%
!	AAATATGACTCATTCATATC+AGG	-	chr2.1:54100676-54100695	None:intergenic	25.0%
!	AATAACAGAACTAAAAGAAG+GGG	+	chr2.1:54100327-54100346	MS.gene58957:CDS	25.0%
!	CAATAACAGAACTAAAAGAA+GGG	+	chr2.1:54100326-54100345	MS.gene58957:CDS	25.0%
!	TCAATAACAGAACTAAAAGA+AGG	+	chr2.1:54100325-54100344	MS.gene58957:CDS	25.0%
!	TTAAAACAAACATTGGAAGT+TGG	-	chr2.1:54100072-54100091	None:intergenic	25.0%
!	TTTCTGCTCTTCATTATAAA+GGG	+	chr2.1:54100578-54100597	MS.gene58957:CDS	25.0%
!!!	ATAAGCTTTGGAAAAAAATG+GGG	+	chr2.1:54100391-54100410	MS.gene58957:CDS	25.0%
!!!	ATCTTCTAAGATACAACATA+AGG	+	chr2.1:54100251-54100270	MS.gene58957:CDS	25.0%
	ACATTCATACAAGCAATTTG+TGG	+	chr2.1:54100832-54100851	MS.gene58957:CDS	30.0%
	AGATTGTAGAAACTCATTTG+TGG	-	chr2.1:54100136-54100155	None:intergenic	30.0%
	ATAACAGAACTAAAAGAAGG+GGG	+	chr2.1:54100328-54100347	MS.gene58957:CDS	30.0%
	CTGTTATTGAATGAATCATC+TGG	-	chr2.1:54100315-54100334	None:intergenic	30.0%
	GGGTTATTCATCATTCTTTA+GGG	+	chr2.1:54100599-54100618	MS.gene58957:CDS	30.0%
	GTTTCTGCTCTTCATTATAA+AGG	+	chr2.1:54100577-54100596	MS.gene58957:CDS	30.0%
	TCAATTATTAGAACCATGGT+CGG	-	chr2.1:54100980-54100999	None:intergenic	30.0%
	TGTAAGATGTTTGACATTCA+GGG	-	chr2.1:54100207-54100226	None:intergenic	30.0%
	TTCTGCTCTTCATTATAAAG+GGG	+	chr2.1:54100579-54100598	MS.gene58957:CDS	30.0%
	TTGTAAGATGTTTGACATTC+AGG	-	chr2.1:54100208-54100227	None:intergenic	30.0%
	TTTCATCATTCAACTCTTGA+GGG	+	chr2.1:54099958-54099977	MS.gene58957:CDS	30.0%
	TTTGTACAAAGTTGTGAATG+AGG	+	chr2.1:54100693-54100712	MS.gene58957:CDS	30.0%
!	GAATTGATGGATATAAGCTT+TGG	+	chr2.1:54100379-54100398	MS.gene58957:CDS	30.0%
	AAAATGGGGAGTTATGGTAA+AGG	+	chr2.1:54100405-54100424	MS.gene58957:CDS	35.0%
	AACATAAGGCCAAAACTCAT+TGG	+	chr2.1:54100265-54100284	MS.gene58957:CDS	35.0%
	AACATCCATCTACTAAGAGA+AGG	-	chr2.1:54100013-54100032	None:intergenic	35.0%
	AACATGTAAGTTGTCATGTC+TGG	-	chr2.1:54100523-54100542	None:intergenic	35.0%
	AATGAGGCGAATGAGTATTT+GGG	+	chr2.1:54100709-54100728	MS.gene58957:CDS	35.0%
	ACATCCATCTACTAAGAGAA+GGG	-	chr2.1:54100012-54100031	None:intergenic	35.0%
	ACTATTCCACCTTTGTACAT+TGG	+	chr2.1:54100433-54100452	MS.gene58957:CDS	35.0%
	ATGTGAGAGTAGAGAATTGA+TGG	+	chr2.1:54100366-54100385	MS.gene58957:CDS	35.0%
	CTTTCATCATTCAACTCTTG+AGG	+	chr2.1:54099957-54099976	MS.gene58957:CDS	35.0%
	GGGGTTATTCATCATTCTTT+AGG	+	chr2.1:54100598-54100617	MS.gene58957:CDS	35.0%
	GTAAGATGTTTGACATTCAG+GGG	-	chr2.1:54100206-54100225	None:intergenic	35.0%
	TCAACTCTTGAGGGATTTAT+CGG	+	chr2.1:54099967-54099986	MS.gene58957:CDS	35.0%
	TGGAAAAAAATGGGGAGTTA+TGG	+	chr2.1:54100399-54100418	MS.gene58957:CDS	35.0%
!	TATTTAACAAGTTGGGCTGT+GGG	+	chr2.1:54100772-54100791	MS.gene58957:CDS	35.0%
!	TTCTACATTAGGTGCTCTTT+TGG	+	chr2.1:54100798-54100817	MS.gene58957:CDS	35.0%
	AATTTGTGGTTTCGCAGATG+CGG	+	chr2.1:54100846-54100865	MS.gene58957:CDS	40.0%
	ATGTCCCTTCTCTTAGTAGA+TGG	+	chr2.1:54100005-54100024	MS.gene58957:CDS	40.0%
	CAGACTCATAAATTCAGCTC+AGG	+	chr2.1:54100552-54100571	MS.gene58957:CDS	40.0%
	CATTATCATCTCACGACGAA+TGG	-	chr2.1:54100041-54100060	None:intergenic	40.0%
	CGAATACTGTATAGTGAGGA+GGG	-	chr2.1:54100939-54100958	None:intergenic	40.0%
	CTGTGATCACCAATGTACAA+AGG	-	chr2.1:54100445-54100464	None:intergenic	40.0%
	GAATGAGGCGAATGAGTATT+TGG	+	chr2.1:54100708-54100727	MS.gene58957:CDS	40.0%
	GTCACTAAAAAAACCGACCA+TGG	+	chr2.1:54100964-54100983	MS.gene58957:CDS	40.0%
	TCGAATACTGTATAGTGAGG+AGG	-	chr2.1:54100940-54100959	None:intergenic	40.0%
	TCGTCGAATACTGTATAGTG+AGG	-	chr2.1:54100943-54100962	None:intergenic	40.0%
	TGATCACCAATGTACAAAGG+TGG	-	chr2.1:54100442-54100461	None:intergenic	40.0%
!	CTATTTAACAAGTTGGGCTG+TGG	+	chr2.1:54100771-54100790	MS.gene58957:CDS	40.0%
!	CTTTGCTTTCTCCAGTTTTG+TGG	-	chr2.1:54100872-54100891	None:intergenic	40.0%
!	GTGATTCGGATTGAAGCAAT+TGG	-	chr2.1:54100177-54100196	None:intergenic	40.0%
!	TTCAGGGGTTTTTCGTGATT+CGG	-	chr2.1:54100191-54100210	None:intergenic	40.0%
!	TTGTACATTGGTGATCACAG+AGG	+	chr2.1:54100445-54100464	MS.gene58957:CDS	40.0%
!!	CGAATGAGTATTTGGGTTGT+TGG	+	chr2.1:54100716-54100735	MS.gene58957:CDS	40.0%
	ATCATCTCACGACGAATGGT+TGG	-	chr2.1:54100037-54100056	None:intergenic	45.0%
	GCTGTGGGACTTTCTACATT+AGG	+	chr2.1:54100787-54100806	MS.gene58957:CDS	45.0%
!	GGTTCATCGCCAATGAGTTT+TGG	-	chr2.1:54100277-54100296	None:intergenic	45.0%
	CTCATTGGCGATGAACCAAG+AGG	+	chr2.1:54100280-54100299	MS.gene58957:CDS	50.0%
	TAGTGAGGAGGGTCACGAAA+TGG	-	chr2.1:54100928-54100947	None:intergenic	50.0%
!!	ATCTGGCTCTGACATCCTCT+TGG	-	chr2.1:54100298-54100317	None:intergenic	50.0%
	AGGGAGTGATGAACACGTCG+CGG	+	chr2.1:54100618-54100637	MS.gene58957:CDS	55.0%
	CGCAGATGCGGCCACAAAAC+TGG	+	chr2.1:54100858-54100877	MS.gene58957:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	54099938	54100999	54099938	ID=MS.gene58957
chr2.1	mRNA	54099938	54100999	54099938	ID=MS.gene58957.t1;Parent=MS.gene58957
chr2.1	exon	54099938	54100999	54099938	ID=MS.gene58957.t1.exon1;Parent=MS.gene58957.t1
chr2.1	CDS	54099938	54100999	54099938	ID=cds.MS.gene58957.t1;Parent=MS.gene58957.t1

Gene Sequence

>MS.gene58957

ATGATGTTGGTTGATGGTTCTTTCATCATTCAACTCTTGAGGGATTTATCGGATAACAAATTCAAACATGTCCCTTCTCTTAGTAGATGGATGTTACCAACCATTCGTCGTGAGATGATAATGCTTGAAAACCAACTTCCAATGTTTGTTTTAACAAAACTTTTCGAGCTAACCGATAAAAACAATAGTCTTCATCCACAAATGAGTTTCTACAATCTTTCTTTCAAATTCTTCTACCAATTGCTTCAATCCGAATCACGAAAAACCCCTGAATGTCAAACATCTTACAAGTTCAAAATAGAACATGTTCTTGATCTTCTAAGATACAACATAAGGCCAAAACTCATTGGCGATGAACCAAGAGGATGTCAGAGCCAGATGATTCATTCAATAACAGAACTAAAAGAAGGGGGTGTGAAAATTAAAGCATGTGAGAGTAGAGAATTGATGGATATAAGCTTTGGAAAAAAATGGGGAGTTATGGTAAAGGAACTAACTATTCCACCTTTGTACATTGGTGATCACAGAGGTACTGTTTTTCGCAACATAGTTGCATTTGAAAAATGTCACAAGAGATGCAATCCAGACATGACAACTTACATGTTTTTCTTAAACAGACTCATAAATTCAGCTCAGGATGTTTCTGCTCTTCATTATAAAGGGGTTATTCATCATTCTTTAGGGAGTGATGAACACGTCGCGGAATTAATCAACAACATAGCTAAAGAAATAGTTCCTGATATGAATGAGTCATATTTGTACAAAGTTGTGAATGAGGCGAATGAGTATTTGGGTTGTTGGCGTGCGAGATTCAGAGCTTCGCTTGTTCATAACTATTTAACAAGTTGGGCTGTGGGACTTTCTACATTAGGTGCTCTTTTGGCTCTTTATTTCACATTCATACAAGCAATTTGTGGTTTCGCAGATGCGGCCACAAAACTGGAGAAAGCAAAGTTCAGTTCCGTGATAAGAAGTTTGATTATAATTCCATTTCGTGACCCTCCTCACTATACAGTATTCGACGATGTCACTAAAAAAACCGACCATGGTTCTAATAATTGA

Protein sequence

>MS.gene58957.t1

MMLVDGSFIIQLLRDLSDNKFKHVPSLSRWMLPTIRREMIMLENQLPMFVLTKLFELTDKNNSLHPQMSFYNLSFKFFYQLLQSESRKTPECQTSYKFKIEHVLDLLRYNIRPKLIGDEPRGCQSQMIHSITELKEGGVKIKACESRELMDISFGKKWGVMVKELTIPPLYIGDHRGTVFRNIVAFEKCHKRCNPDMTTYMFFLNRLINSAQDVSALHYKGVIHHSLGSDEHVAELINNIAKEIVPDMNESYLYKVVNEANEYLGCWRARFRASLVHNYLTSWAVGLSTLGALLALYFTFIQAICGFADAATKLEKAKFSSVIRSLIIIPFRDPPHYTVFDDVTKKTDHGSNN