Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59147.t1 | XP_013466501.1 | 95.6 | 408 | 17 | 1 | 1 | 408 | 1 | 407 | 6.90E-222 | 779.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59147.t1 | P08452 | 56.6 | 343 | 141 | 7 | 39 | 380 | 4 | 339 | 2.4e-98 | 360.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59147.t1 | A0A072VFG1 | 95.6 | 408 | 17 | 1 | 1 | 408 | 1 | 407 | 5.0e-222 | 779.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene59147 | 0.834932 | 2.25E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene59147 | 0.8236 | 1.27E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene59147 | 0.812533 | 4.04E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene59147 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene052051 | MS.gene59147 | 0.843663 | 1.22E-58 | -1.69E-46 |
| MS.gene054010 | MS.gene59147 | 0.82645 | 2.70E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene59147 | 0.823928 | 1.06E-53 | -1.69E-46 |
| MS.gene054012 | MS.gene59147 | 0.830172 | 3.41E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene59147 | 0.832275 | 1.04E-55 | -1.69E-46 |
| MS.gene05455 | MS.gene59147 | 0.832572 | 8.76E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene59147 | 0.809071 | 2.27E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene59147 | 0.842533 | 2.44E-58 | -1.69E-46 |
| MS.gene056452 | MS.gene59147 | 0.830383 | 3.03E-55 | -1.69E-46 |
| MS.gene05811 | MS.gene59147 | 0.826702 | 2.35E-54 | -1.69E-46 |
| MS.gene05842 | MS.gene59147 | 0.8007 | 1.27E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene59147 | 0.817666 | 2.93E-52 | -1.69E-46 |
| MS.gene060559 | MS.gene59147 | 0.803412 | 3.53E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59147.t1 | MTR_1g030640 | 95.588 | 408 | 17 | 1 | 1 | 408 | 1 | 407 | 0.0 | 784 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 122 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTCTTCACAATCTCTT+AGG | 0.174598 | 1.4:+15517255 | MS.gene59147:CDS |
| ATTTGAGTCATACCCTATTT+TGG | 0.182730 | 1.4:-15518911 | None:intergenic |
| AGCTGCATGTCTCAAATTAT+TGG | 0.208256 | 1.4:+15521526 | MS.gene59147:intron |
| TTATTTCTTCTAAGTGAAAA+TGG | 0.212698 | 1.4:-15521591 | None:intergenic |
| AACCTCCTCGGCTGCTGATT+TGG | 0.248392 | 1.4:-15519903 | None:intergenic |
| TACAGCCTGTTCACCAAAAT+AGG | 0.266802 | 1.4:+15518898 | MS.gene59147:CDS |
| ACCTCCTCGGCTGCTGATTT+GGG | 0.286834 | 1.4:-15519902 | None:intergenic |
| TCAAATTATTGGGAAGCTAT+TGG | 0.309504 | 1.4:+15521537 | MS.gene59147:CDS |
| GGAAGAAAATGAAACTGTTC+TGG | 0.329882 | 1.4:+15520835 | MS.gene59147:CDS |
| TTGTTGTGGTTGTTGAAGAA+TGG | 0.349548 | 1.4:-15517215 | None:intergenic |
| GCCGCTATTGGTGGGTTTGC+TGG | 0.357775 | 1.4:+15517412 | MS.gene59147:CDS |
| CACTGCAGATAAACTTGGTT+TGG | 0.358035 | 1.4:+15520862 | MS.gene59147:CDS |
| GAAGAGAGAGCACGAGCAAC+AGG | 0.369231 | 1.4:-15517445 | None:intergenic |
| AGAGATAGGCTCAAGGGAAT+TGG | 0.369687 | 1.4:-15519875 | None:intergenic |
| ACTGGAGTTGGAGCCGCTAT+TGG | 0.377039 | 1.4:+15517400 | MS.gene59147:CDS |
| CAGTAAAGCTCCACAATACT+TGG | 0.386440 | 1.4:+15520527 | MS.gene59147:CDS |
| CTGATTTGGGACTTAGAGAT+AGG | 0.387375 | 1.4:-15519889 | None:intergenic |
| TTAACGCAGCAATGCTATAT+TGG | 0.388018 | 1.4:+15518808 | MS.gene59147:CDS |
| ACATCATCAGTATCATCATC+TGG | 0.389499 | 1.4:-15519601 | None:intergenic |
| GTAGAGAAAGAAGGGGTTAT+CGG | 0.392310 | 1.4:-15517191 | None:intergenic |
| GTCCCCTCCACAAGCATCCC+TGG | 0.394937 | 1.4:-15520616 | None:intergenic |
| CTTCTCTTCACAATCTCTTA+GGG | 0.395011 | 1.4:+15517256 | MS.gene59147:CDS |
| AATGGAAAAGGGTTGCATAT+TGG | 0.400790 | 1.4:+15520566 | MS.gene59147:CDS |
| ACAGCTCTAAGTAAAGAATC+AGG | 0.405933 | 1.4:-15519523 | None:intergenic |
| CCTAATGCATTATATGTTGA+AGG | 0.407076 | 1.4:+15518837 | MS.gene59147:CDS |
| TGTTGTGGTTGTTGAAGAAT+GGG | 0.412053 | 1.4:-15517214 | None:intergenic |
| GGAACTCCTTCACCACTAGA+TGG | 0.413837 | 1.4:-15519820 | None:intergenic |
| AAGTGGATTGATCCTAAAAC+TGG | 0.414539 | 1.4:+15519475 | MS.gene59147:CDS |
| CCTAAAACTGGCAAATCTAC+AGG | 0.418414 | 1.4:+15519487 | MS.gene59147:CDS |
| AAGGGAATTGGAGCCATTGC+AGG | 0.420564 | 1.4:-15519863 | None:intergenic |
| CTGTGCAGACCTTAGTGAAT+AGG | 0.425303 | 1.4:+15519542 | MS.gene59147:CDS |
| GCACTCTGAATCAATGGAAA+AGG | 0.426223 | 1.4:+15520554 | MS.gene59147:CDS |
| GAAATAAAATTCGTAACATT+GGG | 0.428084 | 1.4:+15521607 | MS.gene59147:CDS |
| GGGCATGTGCACAAGGAATT+CGG | 0.431905 | 1.4:-15519841 | None:intergenic |
| GCTGCATGTCTCAAATTATT+GGG | 0.436132 | 1.4:+15521527 | MS.gene59147:intron |
| AGGGATGCTTGTGGAGGGGA+CGG | 0.437088 | 1.4:+15520618 | MS.gene59147:CDS |
| AGAAATAAAATTCGTAACAT+TGG | 0.437314 | 1.4:+15521606 | MS.gene59147:CDS |
| CTGATGATGTTGATGAATAT+CGG | 0.460169 | 1.4:+15519614 | MS.gene59147:CDS |
| ACAGATTTGCAGAAGGGTCA+TGG | 0.468323 | 1.4:+15518871 | MS.gene59147:CDS |
| TTCCCAGGGATGCTTGTGGA+GGG | 0.471362 | 1.4:+15520613 | MS.gene59147:CDS |
| GTGACAGTATATTCTACAAC+AGG | 0.472274 | 1.4:-15519146 | None:intergenic |
| AGATAAACTTGGTTTGGAAT+CGG | 0.473366 | 1.4:+15520868 | MS.gene59147:CDS |
| TCTTCCACAGTAATGATAAG+TGG | 0.473460 | 1.4:-15520818 | None:intergenic |
| GGGATGCTTGTGGAGGGGAC+GGG | 0.474394 | 1.4:+15520619 | MS.gene59147:CDS |
| GTAATAGCTGCTCACAAAGC+AGG | 0.476166 | 1.4:+15521561 | MS.gene59147:CDS |
| GTGAATGCCATCGCTGTTGT+TGG | 0.477098 | 1.4:+15519571 | MS.gene59147:CDS |
| ACAGCCTGTTCACCAAAATA+GGG | 0.477932 | 1.4:+15518899 | MS.gene59147:CDS |
| TGGATTCTGTAGTCCTTCCC+AGG | 0.478829 | 1.4:+15520598 | MS.gene59147:CDS |
| AGAATGGGGTAGAGAAAGAA+GGG | 0.480882 | 1.4:-15517199 | None:intergenic |
| CCTTCAACATATAATGCATT+AGG | 0.484777 | 1.4:-15518837 | None:intergenic |
| GGAGTTGGAGCCGCTATTGG+TGG | 0.485612 | 1.4:+15517403 | MS.gene59147:CDS |
| GTATTTGAGTGACCATTGGC+AGG | 0.490682 | 1.4:-15521645 | None:intergenic |
| AGTTCTTGATGCTGGTATAG+AGG | 0.490977 | 1.4:+15519064 | MS.gene59147:CDS |
| GAGGGAAGCCCTTGCAGCAT+CGG | 0.495642 | 1.4:-15519117 | None:intergenic |
| TCTTGTATTTGAGTGACCAT+TGG | 0.498933 | 1.4:-15521649 | None:intergenic |
| ACATATAATGCATTAGGCAT+TGG | 0.499376 | 1.4:-15518831 | None:intergenic |
| CACTCTGAATCAATGGAAAA+GGG | 0.500456 | 1.4:+15520555 | MS.gene59147:CDS |
| GGTGATGCACTCTGAATCAA+TGG | 0.500894 | 1.4:+15520548 | MS.gene59147:CDS |
| ATGATAGTGCCGACTGGAGT+TGG | 0.501260 | 1.4:+15517388 | MS.gene59147:CDS |
| AAGAATGGGGTAGAGAAAGA+AGG | 0.502658 | 1.4:-15517200 | None:intergenic |
| TGATGAATATCGGCAGGGAT+TGG | 0.504212 | 1.4:+15519624 | MS.gene59147:CDS |
| GTTGGAATAGTTCTTGATGC+TGG | 0.507045 | 1.4:+15519056 | MS.gene59147:CDS |
| TTACATTAGGGTGAGTGATA+AGG | 0.508155 | 1.4:-15517480 | None:intergenic |
| CTTCCCAGGGATGCTTGTGG+AGG | 0.509870 | 1.4:+15520612 | MS.gene59147:CDS |
| TTGTGCACATGCCCCTGCAA+TGG | 0.511213 | 1.4:+15519850 | MS.gene59147:CDS |
| TGAAGAGAAGGAACATGAAA+CGG | 0.522274 | 1.4:-15517243 | None:intergenic |
| CAGATTTGCAGAAGGGTCAT+GGG | 0.525771 | 1.4:+15518872 | MS.gene59147:CDS |
| TACAAGTAGCCGATGCTGCA+AGG | 0.528199 | 1.4:+15519108 | MS.gene59147:CDS |
| GATGCTGCAAGGGCTTCCCT+CGG | 0.535323 | 1.4:+15519119 | MS.gene59147:CDS |
| TCCCAGGGATGCTTGTGGAG+GGG | 0.536283 | 1.4:+15520614 | MS.gene59147:CDS |
| GATGACACTGCAGATAAACT+TGG | 0.538756 | 1.4:+15520857 | MS.gene59147:CDS |
| CCTAAGAGATTGTGAAGAGA+AGG | 0.539364 | 1.4:-15517255 | None:intergenic |
| GTCCTTCCCAGGGATGCTTG+TGG | 0.540707 | 1.4:+15520609 | MS.gene59147:CDS |
| CTGAGGCCAGCTAGCACACA+TGG | 0.542293 | 1.4:-15520507 | None:intergenic |
| TCCCCTCCACAAGCATCCCT+GGG | 0.542524 | 1.4:-15520615 | None:intergenic |
| CTCTTGACAGATTTGCAGAA+GGG | 0.543219 | 1.4:+15518865 | MS.gene59147:CDS |
| CTGGTATAGAGGAAGAGCTT+CGG | 0.548267 | 1.4:+15519075 | MS.gene59147:CDS |
| GAGTTGGAGCCGCTATTGGT+GGG | 0.552438 | 1.4:+15517404 | MS.gene59147:CDS |
| AGACCTACTGGCGGGAGTTG+AGG | 0.554528 | 1.4:+15519787 | MS.gene59147:CDS |
| GAGAAGGAACATGAAACGGT+TGG | 0.559451 | 1.4:-15517239 | None:intergenic |
| ATGAAACGGTTGGTTTGTTG+TGG | 0.564750 | 1.4:-15517229 | None:intergenic |
| CATCATCAGTATCATCATCT+GGG | 0.566233 | 1.4:-15519600 | None:intergenic |
| ACAAGTAGCCGATGCTGCAA+GGG | 0.568105 | 1.4:+15519109 | MS.gene59147:CDS |
| GAGTGCATCACCAAGTATTG+TGG | 0.569897 | 1.4:-15520537 | None:intergenic |
| CTCCACAAGCATCCCTGGGA+AGG | 0.572336 | 1.4:-15520611 | None:intergenic |
| TATAAGCCATCTAGTGGTGA+AGG | 0.577042 | 1.4:+15519814 | MS.gene59147:CDS |
| ACTTCATTTATGCCTGCCAA+TGG | 0.577218 | 1.4:+15521633 | MS.gene59147:CDS |
| CTAAAACTGGCAAATCTACA+GGG | 0.581494 | 1.4:+15519488 | MS.gene59147:CDS |
| AGGGAATTGGAGCCATTGCA+GGG | 0.581967 | 1.4:-15519862 | None:intergenic |
| AAGATACTTGATACCTCAAG+TGG | 0.584669 | 1.4:-15519176 | None:intergenic |
| GCTCTTGACAGATTTGCAGA+AGG | 0.588709 | 1.4:+15518864 | MS.gene59147:CDS |
| TGATGTTGATGAATATCGGC+AGG | 0.589319 | 1.4:+15519618 | MS.gene59147:CDS |
| CTAGAGTTTACTAACCTCCT+CGG | 0.598512 | 1.4:-15519915 | None:intergenic |
| TAATAGCTGCTCACAAAGCA+GGG | 0.602386 | 1.4:+15521562 | MS.gene59147:CDS |
| ATTGCAGGGGCATGTGCACA+AGG | 0.603340 | 1.4:-15519848 | None:intergenic |
| CAGCCTCAACTCCCGCCAGT+AGG | 0.603348 | 1.4:-15519790 | None:intergenic |
| GGATTCTGTAGTCCTTCCCA+GGG | 0.604243 | 1.4:+15520599 | MS.gene59147:CDS |
| TGTCACAGACACTCCACTTG+AGG | 0.604509 | 1.4:+15519163 | MS.gene59147:CDS |
| TTGCATATTGGCAAGTGATG+TGG | 0.609804 | 1.4:+15520578 | MS.gene59147:CDS |
| TTCTACAACAGGCAATCCGA+GGG | 0.610250 | 1.4:-15519135 | None:intergenic |
| TATACAGGGAGTAGACCTAC+TGG | 0.612219 | 1.4:+15519775 | MS.gene59147:intron |
| GGACTTAGAGATAGGCTCAA+GGG | 0.614747 | 1.4:-15519881 | None:intergenic |
| ACCAGCAAACCCACCAATAG+CGG | 0.615654 | 1.4:-15517413 | None:intergenic |
| GGGACTTAGAGATAGGCTCA+AGG | 0.618985 | 1.4:-15519882 | None:intergenic |
| TCCCAAATCAGCAGCCGAGG+AGG | 0.621887 | 1.4:+15519901 | MS.gene59147:CDS |
| CAGCTCTAAGTAAAGAATCA+GGG | 0.622102 | 1.4:-15519522 | None:intergenic |
| ATTCTACAACAGGCAATCCG+AGG | 0.628425 | 1.4:-15519136 | None:intergenic |
| GGCTGTTATAAGCCATCTAG+TGG | 0.629360 | 1.4:+15519808 | MS.gene59147:CDS |
| AAGTCCCAAATCAGCAGCCG+AGG | 0.631473 | 1.4:+15519898 | MS.gene59147:CDS |
| ATAGCGGCTCCAACTCCAGT+CGG | 0.636830 | 1.4:-15517397 | None:intergenic |
| GTTGTGGTTGTTGAAGAATG+GGG | 0.643585 | 1.4:-15517213 | None:intergenic |
| CAGGGAGTAGACCTACTGGC+GGG | 0.651585 | 1.4:+15519779 | MS.gene59147:intron |
| GAAACGTCCAACAACAGCGA+TGG | 0.657732 | 1.4:-15519578 | None:intergenic |
| GGGAATTGGAGCCATTGCAG+GGG | 0.657844 | 1.4:-15519861 | None:intergenic |
| AGTATTGTGGAGCTTTACTG+AGG | 0.661521 | 1.4:-15520524 | None:intergenic |
| TATCGGAAGATTGAGAGTGA+AGG | 0.663850 | 1.4:-15517174 | None:intergenic |
| AGTGTGATGATAGTGCCGAC+TGG | 0.664849 | 1.4:+15517382 | MS.gene59147:CDS |
| GCAGCCACTTATCATTACTG+TGG | 0.673374 | 1.4:+15520814 | MS.gene59147:intron |
| GAATGGGGTAGAGAAAGAAG+GGG | 0.674497 | 1.4:-15517198 | None:intergenic |
| GATGTTGATGAATATCGGCA+GGG | 0.699845 | 1.4:+15519619 | MS.gene59147:CDS |
| ACAGGGAGTAGACCTACTGG+CGG | 0.713149 | 1.4:+15519778 | MS.gene59147:intron |
| AAACTGGCAAATCTACAGGG+AGG | 0.758367 | 1.4:+15519491 | MS.gene59147:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTGAATATTGAAAT+TGG | + | chr1.4:15518348-15518367 | MS.gene59147:intron | 10.0% |
| !!! | AAAATACTATTAATTTGTTA+TGG | + | chr1.4:15517320-15517339 | MS.gene59147:intron | 10.0% |
| !!! | TTTTGTATTATTCATTAATT+TGG | + | chr1.4:15519721-15519740 | MS.gene59147:intron | 10.0% |
| !!! | TTTTTGTACATATATATAAA+GGG | - | chr1.4:15518405-15518424 | None:intergenic | 10.0% |
| !!! | TTTTTTGTACATATATATAA+AGG | - | chr1.4:15518406-15518425 | None:intergenic | 10.0% |
| !! | AAAAAAATCAATGATTTGAT+TGG | + | chr1.4:15518422-15518441 | MS.gene59147:intron | 15.0% |
| !! | AATTCTACAACAATATATAA+AGG | - | chr1.4:15518532-15518551 | None:intergenic | 15.0% |
| !! | ATTAAAATGAAACTCATTAT+TGG | + | chr1.4:15521481-15521500 | MS.gene59147:intron | 15.0% |
| !! | ATTCTACAACAATATATAAA+GGG | - | chr1.4:15518531-15518550 | None:intergenic | 15.0% |
| !! | CAAAAAATAAGGTATATTAA+TGG | + | chr1.4:15520664-15520683 | MS.gene59147:intron | 15.0% |
| !! | CAAAATTAAAAAGAGATTAA+AGG | - | chr1.4:15521177-15521196 | None:intergenic | 15.0% |
| !! | GATAAAATAGTTTAAATGAA+TGG | + | chr1.4:15518466-15518485 | MS.gene59147:intron | 15.0% |
| !! | TTAAATTTCCATTCATTTAA+TGG | - | chr1.4:15520331-15520350 | None:intergenic | 15.0% |
| !!! | CTATTTTCGTAAATTATTAT+TGG | + | chr1.4:15520097-15520116 | MS.gene59147:intron | 15.0% |
| !!! | TTCTATTTTAATTTAACTCA+AGG | - | chr1.4:15521423-15521442 | None:intergenic | 15.0% |
| !! | AAAATAAGGTATATTAATGG+AGG | + | chr1.4:15520667-15520686 | MS.gene59147:intron | 20.0% |
| !! | AAAGATATAGAGAAAGAATA+AGG | - | chr1.4:15520262-15520281 | None:intergenic | 20.0% |
| !! | AAGTCAATTTGCATTATATA+CGG | - | chr1.4:15519435-15519454 | None:intergenic | 20.0% |
| !! | AGAAATAAAATTCGTAACAT+TGG | + | chr1.4:15521606-15521625 | MS.gene59147:CDS | 20.0% |
| !! | AGTAAATAGAAGCAATAAAT+TGG | - | chr1.4:15517533-15517552 | None:intergenic | 20.0% |
| !! | GAAATAAAATTCGTAACATT+GGG | + | chr1.4:15521607-15521626 | MS.gene59147:CDS | 20.0% |
| !! | TGATAGATAACATTACATTA+GGG | - | chr1.4:15517495-15517514 | None:intergenic | 20.0% |
| !! | TTCTAAGTGAATATCTAATA+TGG | + | chr1.4:15517634-15517653 | MS.gene59147:intron | 20.0% |
| !!! | AAGTATACATTTAAGTTTCT+TGG | + | chr1.4:15518761-15518780 | MS.gene59147:intron | 20.0% |
| !!! | ATAGATACAGTTTAATTTCT+AGG | - | chr1.4:15520754-15520773 | None:intergenic | 20.0% |
| !!! | ATCAAACAATTGTGAAATTT+TGG | + | chr1.4:15519317-15519336 | MS.gene59147:intron | 20.0% |
| !!! | GTAAATTATTATTGGTTTCT+AGG | + | chr1.4:15520105-15520124 | MS.gene59147:intron | 20.0% |
| !!! | TTATTTCTTCTAAGTGAAAA+TGG | - | chr1.4:15521594-15521613 | None:intergenic | 20.0% |
| !!! | TTTCTCTATATCTTTTATTG+AGG | + | chr1.4:15520267-15520286 | MS.gene59147:intron | 20.0% |
| ! | AACATAACAAAGTGACATTA+TGG | - | chr1.4:15520973-15520992 | None:intergenic | 25.0% |
| ! | AAGAAAATAAGGGAAAAGAT+AGG | + | chr1.4:15521304-15521323 | MS.gene59147:intron | 25.0% |
| ! | AGCATAGATATGTCTAATAA+GGG | - | chr1.4:15519256-15519275 | None:intergenic | 25.0% |
| ! | ATTGTCAAACATTGAAAAGT+TGG | - | chr1.4:15520781-15520800 | None:intergenic | 25.0% |
| ! | ATTTCGAAATTTATAGTCAG+AGG | + | chr1.4:15519683-15519702 | MS.gene59147:intron | 25.0% |
| ! | CAGGAACATTTAGTAATATT+GGG | - | chr1.4:15518693-15518712 | None:intergenic | 25.0% |
| ! | CATATACGTATCAAAATTGT+AGG | + | chr1.4:15519376-15519395 | MS.gene59147:intron | 25.0% |
| ! | CTCTTAATTTCATCAGTATA+TGG | + | chr1.4:15518715-15518734 | MS.gene59147:intron | 25.0% |
| ! | GAAAGAATAAGGAAAACTTA+CGG | - | chr1.4:15520251-15520270 | None:intergenic | 25.0% |
| ! | GCTAAAATCTTCATACAATT+TGG | + | chr1.4:15519273-15519292 | MS.gene59147:intron | 25.0% |
| ! | GTGATAGATAACATTACATT+AGG | - | chr1.4:15517496-15517515 | None:intergenic | 25.0% |
| ! | GTTCAAATAGCATATTCTAA+AGG | - | chr1.4:15520356-15520375 | None:intergenic | 25.0% |
| ! | TAGCATAGATATGTCTAATA+AGG | - | chr1.4:15519257-15519276 | None:intergenic | 25.0% |
| ! | TATCAATCTAGTTGAATTTC+TGG | - | chr1.4:15520712-15520731 | None:intergenic | 25.0% |
| ! | TTCAATGCTTCTTAGAAATA+TGG | + | chr1.4:15520129-15520148 | MS.gene59147:intron | 25.0% |
| !! | AACTCAAGGATTTAAAGTAT+CGG | - | chr1.4:15521409-15521428 | None:intergenic | 25.0% |
| !! | TTTTATTGTGTAAATCAGGT+TGG | + | chr1.4:15519038-15519057 | MS.gene59147:intron | 25.0% |
| !!! | ATTGACTTGCAATTTTTTTC+AGG | + | chr1.4:15519447-15519466 | MS.gene59147:intron | 25.0% |
| !!! | GAGTTTCATTTTAATTGCAT+TGG | - | chr1.4:15521476-15521495 | None:intergenic | 25.0% |
| !!! | TTCTACAAAACTGATTTGTA+AGG | - | chr1.4:15521077-15521096 | None:intergenic | 25.0% |
| !!! | TTCTTTTTTCCTCATTGATT+GGG | + | chr1.4:15518307-15518326 | MS.gene59147:intron | 25.0% |
| !!! | TTTTCCCTTATTTTCTTCAT+TGG | - | chr1.4:15521301-15521320 | None:intergenic | 25.0% |
| !!! | TTTTTGTCAATTGACTTCAT+AGG | - | chr1.4:15521256-15521275 | None:intergenic | 25.0% |
| AAAATTGAACCTACACAAAG+TGG | + | chr1.4:15517833-15517852 | MS.gene59147:intron | 30.0% | |
| AAACACACGCATATAATTCA+TGG | - | chr1.4:15517678-15517697 | None:intergenic | 30.0% | |
| ACATATAATGCATTAGGCAT+TGG | - | chr1.4:15518834-15518853 | None:intergenic | 30.0% | |
| ACGAACTCATTCTTAGAATT+TGG | - | chr1.4:15521116-15521135 | None:intergenic | 30.0% | |
| AGGCAAAAGTTAAGATAGAT+GGG | + | chr1.4:15521324-15521343 | MS.gene59147:intron | 30.0% | |
| ATAAACGTTAAACGCATGTT+TGG | - | chr1.4:15518194-15518213 | None:intergenic | 30.0% | |
| ATGAATTATATGCGTGTGTT+TGG | + | chr1.4:15517677-15517696 | MS.gene59147:intron | 30.0% | |
| ATGCACCAATGAAGAAAATA+AGG | + | chr1.4:15521293-15521312 | MS.gene59147:intron | 30.0% | |
| ATTTGCATGGATAATAATGG+TGG | + | chr1.4:15520444-15520463 | MS.gene59147:intron | 30.0% | |
| CCTAATGCATTATATGTTGA+AGG | + | chr1.4:15518837-15518856 | MS.gene59147:CDS | 30.0% | |
| CCTTCAACATATAATGCATT+AGG | - | chr1.4:15518840-15518859 | None:intergenic | 30.0% | |
| CGAACTCATTCTTAGAATTT+GGG | - | chr1.4:15521115-15521134 | None:intergenic | 30.0% | |
| CTAACATATTTAGCCAACTT+CGG | - | chr1.4:15520167-15520186 | None:intergenic | 30.0% | |
| GAAACTAAGTGAATCACATA+AGG | - | chr1.4:15518630-15518649 | None:intergenic | 30.0% | |
| GAGAATTAGAAATATCTAGC+TGG | - | chr1.4:15520421-15520440 | None:intergenic | 30.0% | |
| GCAGGAACATTTAGTAATAT+TGG | - | chr1.4:15518694-15518713 | None:intergenic | 30.0% | |
| TAGGCAAAAGTTAAGATAGA+TGG | + | chr1.4:15521323-15521342 | MS.gene59147:intron | 30.0% | |
| TAGTTAAAAGCGAGTTAAAC+CGG | + | chr1.4:15518093-15518112 | MS.gene59147:intron | 30.0% | |
| TATGGTTGTCTTGAATGATA+AGG | + | chr1.4:15518733-15518752 | MS.gene59147:intron | 30.0% | |
| TCAAATTATTGGGAAGCTAT+TGG | + | chr1.4:15521537-15521556 | MS.gene59147:CDS | 30.0% | |
| TGCACCAATGAAGAAAATAA+GGG | + | chr1.4:15521294-15521313 | MS.gene59147:intron | 30.0% | |
| TGCACGAAATGCAAAAAATA+AGG | + | chr1.4:15520653-15520672 | MS.gene59147:CDS | 30.0% | |
| TGCATTTGCATGGATAATAA+TGG | + | chr1.4:15520441-15520460 | MS.gene59147:intron | 30.0% | |
| TGTATGTCATAAACTAGTCA+AGG | - | chr1.4:15518965-15518984 | None:intergenic | 30.0% | |
| TTAAAGAACTTGACCTTGAA+TGG | - | chr1.4:15521383-15521402 | None:intergenic | 30.0% | |
| TTGAATGTATCTACATGTGT+TGG | - | chr1.4:15520071-15520090 | None:intergenic | 30.0% | |
| TTGCTCTTGTCAAATAGATT+GGG | + | chr1.4:15520472-15520491 | MS.gene59147:intron | 30.0% | |
| TTTAAACCAGTAAGAGATGT+AGG | - | chr1.4:15517792-15517811 | None:intergenic | 30.0% | |
| TTTGCATTATATACGGTGTT+AGG | - | chr1.4:15519428-15519447 | None:intergenic | 30.0% | |
| ! | ATAAAGGGAACATCAACTTT+TGG | - | chr1.4:15518516-15518535 | None:intergenic | 30.0% |
| ! | ATACAGTTTAATTTCTAGGC+AGG | - | chr1.4:15520750-15520769 | None:intergenic | 30.0% |
| ! | ATTTGAGTCATACCCTATTT+TGG | - | chr1.4:15518914-15518933 | None:intergenic | 30.0% |
| ! | CATTTAAGTTTCTTGGTTAC+TGG | + | chr1.4:15518768-15518787 | MS.gene59147:intron | 30.0% |
| ! | CTGATGATGTTGATGAATAT+CGG | + | chr1.4:15519614-15519633 | MS.gene59147:CDS | 30.0% |
| ! | GAGCTTTTATTGTGTAAATC+AGG | + | chr1.4:15519034-15519053 | MS.gene59147:intron | 30.0% |
| ! | TGATCAAGTTCGTCTTTTAT+TGG | + | chr1.4:15518580-15518599 | MS.gene59147:intron | 30.0% |
| !! | AGATAAACTTGGTTTGGAAT+CGG | + | chr1.4:15520868-15520887 | MS.gene59147:CDS | 30.0% |
| !! | ATTTGTTCCTTTTAGAAGAC+TGG | + | chr1.4:15521200-15521219 | MS.gene59147:intron | 30.0% |
| !! | CAGTTTTGTAGAATTGTGTT+AGG | + | chr1.4:15521084-15521103 | MS.gene59147:intron | 30.0% |
| !! | CTTACTGGTTTAAATCATTG+CGG | + | chr1.4:15517798-15517817 | MS.gene59147:intron | 30.0% |
| !! | TAGTTGAATTTCTGGTATCA+TGG | - | chr1.4:15520704-15520723 | None:intergenic | 30.0% |
| !! | TTACTGGTTTAAATCATTGC+GGG | + | chr1.4:15517799-15517818 | MS.gene59147:intron | 30.0% |
| !!! | ATTTTTTTCAGGTAGAGAAG+TGG | + | chr1.4:15519458-15519477 | MS.gene59147:intron | 30.0% |
| !!! | CTTCTTTTTTCCTCATTGAT+TGG | + | chr1.4:15518306-15518325 | MS.gene59147:intron | 30.0% |
| !!! | GTTATGGTTGTTGTTTTTGT+GGG | + | chr1.4:15517336-15517355 | MS.gene59147:intron | 30.0% |
| !!! | TGTTATGGTTGTTGTTTTTG+TGG | + | chr1.4:15517335-15517354 | MS.gene59147:intron | 30.0% |
| AAGATACTTGATACCTCAAG+TGG | - | chr1.4:15519179-15519198 | None:intergenic | 35.0% | |
| AATGGAAAAGGGTTGCATAT+TGG | + | chr1.4:15520566-15520585 | MS.gene59147:CDS | 35.0% | |
| ACATCATCAGTATCATCATC+TGG | - | chr1.4:15519604-15519623 | None:intergenic | 35.0% | |
| ACTCATCAATAGACGTGATT+TGG | + | chr1.4:15518116-15518135 | MS.gene59147:intron | 35.0% | |
| ACTCTAGATAGCCTCTAATT+TGG | + | chr1.4:15519931-15519950 | MS.gene59147:intron | 35.0% | |
| ACTGATGAAATTAAGAGAGC+AGG | - | chr1.4:15518712-15518731 | None:intergenic | 35.0% | |
| AGCTGCATGTCTCAAATTAT+TGG | + | chr1.4:15521526-15521545 | MS.gene59147:intron | 35.0% | |
| ATAGCCTCTAATTTGGTTGT+TGG | + | chr1.4:15519938-15519957 | MS.gene59147:intron | 35.0% | |
| CAATCAATACATGTCTGTGT+CGG | - | chr1.4:15520027-15520046 | None:intergenic | 35.0% | |
| CACTCTGAATCAATGGAAAA+GGG | + | chr1.4:15520555-15520574 | MS.gene59147:CDS | 35.0% | |
| CATCATCAGTATCATCATCT+GGG | - | chr1.4:15519603-15519622 | None:intergenic | 35.0% | |
| CCATCTCTCCATTAAATGAA+TGG | + | chr1.4:15520320-15520339 | MS.gene59147:intron | 35.0% | |
| CCATTCATTTAATGGAGAGA+TGG | - | chr1.4:15520323-15520342 | None:intergenic | 35.0% | |
| CGAAGTTGGCTAAATATGTT+AGG | + | chr1.4:15520165-15520184 | MS.gene59147:intron | 35.0% | |
| CTAAAACTGGCAAATCTACA+GGG | + | chr1.4:15519488-15519507 | MS.gene59147:CDS | 35.0% | |
| CTAATACCTACATCTCTTAC+TGG | + | chr1.4:15517783-15517802 | MS.gene59147:intron | 35.0% | |
| CTCATCAATAGACGTGATTT+GGG | + | chr1.4:15518117-15518136 | MS.gene59147:intron | 35.0% | |
| CTCATTCTTAGAATTTGGGT+TGG | - | chr1.4:15521111-15521130 | None:intergenic | 35.0% | |
| CTCTTTGCATAAGAATGACA+TGG | - | chr1.4:15520300-15520319 | None:intergenic | 35.0% | |
| CTTCTCTTCACAATCTCTTA+GGG | + | chr1.4:15517256-15517275 | MS.gene59147:CDS | 35.0% | |
| CTTGCTCTTGTCAAATAGAT+TGG | + | chr1.4:15520471-15520490 | MS.gene59147:intron | 35.0% | |
| GCAGAAGTAGTAAAAGGAAA+AGG | - | chr1.4:15517294-15517313 | None:intergenic | 35.0% | |
| GCTGCATGTCTCAAATTATT+GGG | + | chr1.4:15521527-15521546 | MS.gene59147:intron | 35.0% | |
| GGAAGAAAATGAAACTGTTC+TGG | + | chr1.4:15520835-15520854 | MS.gene59147:CDS | 35.0% | |
| GGTTCGACTATTTCAGAATA+GGG | + | chr1.4:15519959-15519978 | MS.gene59147:intron | 35.0% | |
| GTGACAGTATATTCTACAAC+AGG | - | chr1.4:15519149-15519168 | None:intergenic | 35.0% | |
| TCATCAATAGACGTGATTTG+GGG | + | chr1.4:15518118-15518137 | MS.gene59147:intron | 35.0% | |
| TCTAATTCTCTGCATTTGCA+TGG | + | chr1.4:15520431-15520450 | MS.gene59147:intron | 35.0% | |
| TCTTCCACAGTAATGATAAG+TGG | - | chr1.4:15520821-15520840 | None:intergenic | 35.0% | |
| TCTTGTATTTGAGTGACCAT+TGG | - | chr1.4:15521652-15521671 | None:intergenic | 35.0% | |
| TGAAGAGAAGGAACATGAAA+CGG | - | chr1.4:15517246-15517265 | None:intergenic | 35.0% | |
| TGACCTTGAATGGATCAAAA+GGG | - | chr1.4:15521373-15521392 | None:intergenic | 35.0% | |
| TGCGTTTAACGTTTATGATG+CGG | + | chr1.4:15518198-15518217 | MS.gene59147:intron | 35.0% | |
| TGGTTCGACTATTTCAGAAT+AGG | + | chr1.4:15519958-15519977 | MS.gene59147:intron | 35.0% | |
| TGTTGTGGTTGTTGAAGAAT+GGG | - | chr1.4:15517217-15517236 | None:intergenic | 35.0% | |
| TTAACGCAGCAATGCTATAT+TGG | + | chr1.4:15518808-15518827 | MS.gene59147:CDS | 35.0% | |
| TTACATTAGGGTGAGTGATA+AGG | - | chr1.4:15517483-15517502 | None:intergenic | 35.0% | |
| TTGACCTTGAATGGATCAAA+AGG | - | chr1.4:15521374-15521393 | None:intergenic | 35.0% | |
| TTGTCTGCAGAAGTAGTAAA+AGG | - | chr1.4:15517300-15517319 | None:intergenic | 35.0% | |
| TTGTTGTGGTTGTTGAAGAA+TGG | - | chr1.4:15517218-15517237 | None:intergenic | 35.0% | |
| ! | CACTTTTGACCTATTCACTA+AGG | - | chr1.4:15519554-15519573 | None:intergenic | 35.0% |
| ! | GTGTTTTCTTGTCTTATGCA+TGG | + | chr1.4:15517577-15517596 | MS.gene59147:intron | 35.0% |
| ! | TTACCCTTTTGATCCATTCA+AGG | + | chr1.4:15521367-15521386 | MS.gene59147:intron | 35.0% |
| ! | TTTCCTCATTGATTGGGTAA+TGG | + | chr1.4:15518313-15518332 | MS.gene59147:intron | 35.0% |
| !! | AAGTGGATTGATCCTAAAAC+TGG | + | chr1.4:15519475-15519494 | MS.gene59147:CDS | 35.0% |
| !! | ACAGCTCTAAGTAAAGAATC+AGG | - | chr1.4:15519526-15519545 | None:intergenic | 35.0% |
| !! | CAGCTCTAAGTAAAGAATCA+GGG | - | chr1.4:15519525-15519544 | None:intergenic | 35.0% |
| !! | TACATGTGTTGGTGTTGTAT+CGG | - | chr1.4:15520060-15520079 | None:intergenic | 35.0% |
| !! | TCCTTTTAGAAGACTGGATA+GGG | + | chr1.4:15521206-15521225 | MS.gene59147:intron | 35.0% |
| !! | TTCCTTTTAGAAGACTGGAT+AGG | + | chr1.4:15521205-15521224 | MS.gene59147:intron | 35.0% |
| AACAGGCAAAATCTGGTGTT+TGG | - | chr1.4:15518171-15518190 | None:intergenic | 40.0% | |
| AAGAATGGGGTAGAGAAAGA+AGG | - | chr1.4:15517203-15517222 | None:intergenic | 40.0% | |
| ACAGCCTGTTCACCAAAATA+GGG | + | chr1.4:15518899-15518918 | MS.gene59147:CDS | 40.0% | |
| ACCCTATCCAGTCTTCTAAA+AGG | - | chr1.4:15521210-15521229 | None:intergenic | 40.0% | |
| ACTTCATTTATGCCTGCCAA+TGG | + | chr1.4:15521633-15521652 | MS.gene59147:CDS | 40.0% | |
| AGAATAGGGTTATGTAGCAC+AGG | + | chr1.4:15519973-15519992 | MS.gene59147:intron | 40.0% | |
| AGAATGGGGTAGAGAAAGAA+GGG | - | chr1.4:15517202-15517221 | None:intergenic | 40.0% | |
| AGTAATGATAAGTGGCTGCA+AGG | - | chr1.4:15520813-15520832 | None:intergenic | 40.0% | |
| AGTATTGTGGAGCTTTACTG+AGG | - | chr1.4:15520527-15520546 | None:intergenic | 40.0% | |
| AGTTCTTGATGCTGGTATAG+AGG | + | chr1.4:15519064-15519083 | MS.gene59147:CDS | 40.0% | |
| ATCACGTCTATTGATGAGTC+CGG | - | chr1.4:15518115-15518134 | None:intergenic | 40.0% | |
| ATTGAACCTACACAAAGTGG+TGG | + | chr1.4:15517836-15517855 | MS.gene59147:intron | 40.0% | |
| CAATGTGTTCGATGTTTGTG+CGG | - | chr1.4:15521010-15521029 | None:intergenic | 40.0% | |
| CACTGCAGATAAACTTGGTT+TGG | + | chr1.4:15520862-15520881 | MS.gene59147:CDS | 40.0% | |
| CAGTAAAGCTCCACAATACT+TGG | + | chr1.4:15520527-15520546 | MS.gene59147:CDS | 40.0% | |
| CATAAACTAGTCAAGGATGC+AGG | - | chr1.4:15518958-15518977 | None:intergenic | 40.0% | |
| CCTAAAACTGGCAAATCTAC+AGG | + | chr1.4:15519487-15519506 | MS.gene59147:CDS | 40.0% | |
| CCTAAGAGATTGTGAAGAGA+AGG | - | chr1.4:15517258-15517277 | None:intergenic | 40.0% | |
| CCTTCTCTTCACAATCTCTT+AGG | + | chr1.4:15517255-15517274 | MS.gene59147:CDS | 40.0% | |
| CGAACACATTGAATGAGAGT+GGG | + | chr1.4:15521019-15521038 | MS.gene59147:intron | 40.0% | |
| CGAACCAACAACCAAATTAG+AGG | - | chr1.4:15519945-15519964 | None:intergenic | 40.0% | |
| CTAGAGTTTACTAACCTCCT+CGG | - | chr1.4:15519918-15519937 | None:intergenic | 40.0% | |
| CTCTTGACAGATTTGCAGAA+GGG | + | chr1.4:15518865-15518884 | MS.gene59147:CDS | 40.0% | |
| GATGACACTGCAGATAAACT+TGG | + | chr1.4:15520857-15520876 | MS.gene59147:CDS | 40.0% | |
| GCACTCTGAATCAATGGAAA+AGG | + | chr1.4:15520554-15520573 | MS.gene59147:CDS | 40.0% | |
| GGTTGTCTTGAATGATAAGG+TGG | + | chr1.4:15518736-15518755 | MS.gene59147:intron | 40.0% | |
| GTAGAGAAAGAAGGGGTTAT+CGG | - | chr1.4:15517194-15517213 | None:intergenic | 40.0% | |
| GTTGGAATAGTTCTTGATGC+TGG | + | chr1.4:15519056-15519075 | MS.gene59147:CDS | 40.0% | |
| GTTGTGGTTGTTGAAGAATG+GGG | - | chr1.4:15517216-15517235 | None:intergenic | 40.0% | |
| TAATAGCTGCTCACAAAGCA+GGG | + | chr1.4:15521562-15521581 | MS.gene59147:CDS | 40.0% | |
| TACAGCCTGTTCACCAAAAT+AGG | + | chr1.4:15518898-15518917 | MS.gene59147:CDS | 40.0% | |
| TACATGTCTGTGTCGGATAT+TGG | - | chr1.4:15520020-15520039 | None:intergenic | 40.0% | |
| TATAAGCCATCTAGTGGTGA+AGG | + | chr1.4:15519814-15519833 | MS.gene59147:CDS | 40.0% | |
| TATCGGAAGATTGAGAGTGA+AGG | - | chr1.4:15517177-15517196 | None:intergenic | 40.0% | |
| TCGAACACATTGAATGAGAG+TGG | + | chr1.4:15521018-15521037 | MS.gene59147:intron | 40.0% | |
| TCTGAACACTCGTATGATAG+TGG | - | chr1.4:15518249-15518268 | None:intergenic | 40.0% | |
| TGTCCATTACCCAATCAATG+AGG | - | chr1.4:15518319-15518338 | None:intergenic | 40.0% | |
| TTGAACCTACACAAAGTGGT+GGG | + | chr1.4:15517837-15517856 | MS.gene59147:intron | 40.0% | |
| TTGCATATTGGCAAGTGATG+TGG | + | chr1.4:15520578-15520597 | MS.gene59147:CDS | 40.0% | |
| ! | CATCAATAGACGTGATTTGG+GGG | + | chr1.4:15518119-15518138 | MS.gene59147:intron | 40.0% |
| ! | CCTGTAGATTTGCCAGTTTT+AGG | - | chr1.4:15519490-15519509 | None:intergenic | 40.0% |
| ! | GATGTTGATGAATATCGGCA+GGG | + | chr1.4:15519619-15519638 | MS.gene59147:CDS | 40.0% |
| ! | GGGGATGGAATTGATTTAGA+TGG | + | chr1.4:15518138-15518157 | MS.gene59147:intron | 40.0% |
| ! | GTTAAACGCATGTTTGGAAC+AGG | - | chr1.4:15518188-15518207 | None:intergenic | 40.0% |
| ! | TGATGTTGATGAATATCGGC+AGG | + | chr1.4:15519618-15519637 | MS.gene59147:CDS | 40.0% |
| ! | TGTTTGGAACAGGCAAAATC+TGG | - | chr1.4:15518178-15518197 | None:intergenic | 40.0% |
| !! | ATGAAACGGTTGGTTTGTTG+TGG | - | chr1.4:15517232-15517251 | None:intergenic | 40.0% |
| !! | ATTTTGGTGAACAGGCTGTA+AGG | - | chr1.4:15518898-15518917 | None:intergenic | 40.0% |
| !! | CAAAACTGATTTGTAAGGCG+AGG | - | chr1.4:15521072-15521091 | None:intergenic | 40.0% |
| !! | CTGATTTGGGACTTAGAGAT+AGG | - | chr1.4:15519892-15519911 | None:intergenic | 40.0% |
| !!! | CATACCCTATTTTGGTGAAC+AGG | - | chr1.4:15518906-15518925 | None:intergenic | 40.0% |
| !!! | TATGCGTGTGTTTGGTTTTG+CGG | + | chr1.4:15517685-15517704 | MS.gene59147:intron | 40.0% |
| AAACTGGCAAATCTACAGGG+AGG | + | chr1.4:15519491-15519510 | MS.gene59147:CDS | 45.0% | |
| ACAGATTTGCAGAAGGGTCA+TGG | + | chr1.4:15518871-15518890 | MS.gene59147:CDS | 45.0% | |
| AGAGATAGGCTCAAGGGAAT+TGG | - | chr1.4:15519878-15519897 | None:intergenic | 45.0% | |
| ATTCTACAACAGGCAATCCG+AGG | - | chr1.4:15519139-15519158 | None:intergenic | 45.0% | |
| CAGATTTGCAGAAGGGTCAT+GGG | + | chr1.4:15518872-15518891 | MS.gene59147:CDS | 45.0% | |
| CCTGTATAAGGCGAACAACA+GGG | - | chr1.4:15519763-15519782 | None:intergenic | 45.0% | |
| CCTGTTGTTCGCCTTATACA+GGG | + | chr1.4:15519761-15519780 | MS.gene59147:intron | 45.0% | |
| CTGGTATAGAGGAAGAGCTT+CGG | + | chr1.4:15519075-15519094 | MS.gene59147:CDS | 45.0% | |
| CTGTGCAGACCTTAGTGAAT+AGG | + | chr1.4:15519542-15519561 | MS.gene59147:CDS | 45.0% | |
| GAATGGGGTAGAGAAAGAAG+GGG | - | chr1.4:15517201-15517220 | None:intergenic | 45.0% | |
| GAGAAGGAACATGAAACGGT+TGG | - | chr1.4:15517242-15517261 | None:intergenic | 45.0% | |
| GATGTTTGTGCGGACAGTTT+AGG | - | chr1.4:15521000-15521019 | None:intergenic | 45.0% | |
| GCAGCCACTTATCATTACTG+TGG | + | chr1.4:15520814-15520833 | MS.gene59147:intron | 45.0% | |
| GCTCTTGACAGATTTGCAGA+AGG | + | chr1.4:15518864-15518883 | MS.gene59147:CDS | 45.0% | |
| GGACTTAGAGATAGGCTCAA+GGG | - | chr1.4:15519884-15519903 | None:intergenic | 45.0% | |
| GGCTGTTATAAGCCATCTAG+TGG | + | chr1.4:15519808-15519827 | MS.gene59147:CDS | 45.0% | |
| GGTGATGCACTCTGAATCAA+TGG | + | chr1.4:15520548-15520567 | MS.gene59147:CDS | 45.0% | |
| GGTTACTGGTCAAATTCTGC+AGG | + | chr1.4:15518782-15518801 | MS.gene59147:intron | 45.0% | |
| GTAATAGCTGCTCACAAAGC+AGG | + | chr1.4:15521561-15521580 | MS.gene59147:CDS | 45.0% | |
| GTAGGTCTACTCCCTGTATA+AGG | - | chr1.4:15519775-15519794 | None:intergenic | 45.0% | |
| GTAGTTGCTACATCCGAAGT+TGG | + | chr1.4:15520151-15520170 | MS.gene59147:intron | 45.0% | |
| GTATTTGAGTGACCATTGGC+AGG | - | chr1.4:15521648-15521667 | None:intergenic | 45.0% | |
| TATACAGGGAGTAGACCTAC+TGG | + | chr1.4:15519775-15519794 | MS.gene59147:intron | 45.0% | |
| TATGTCCCACCACTTTGTGT+AGG | - | chr1.4:15517845-15517864 | None:intergenic | 45.0% | |
| TCCAACAAAAGAGTGAGTGC+TGG | + | chr1.4:15517876-15517895 | MS.gene59147:intron | 45.0% | |
| TGATGAATATCGGCAGGGAT+TGG | + | chr1.4:15519624-15519643 | MS.gene59147:CDS | 45.0% | |
| TTCTACAACAGGCAATCCGA+GGG | - | chr1.4:15519138-15519157 | None:intergenic | 45.0% | |
| ! | AATAGACGTGATTTGGGGGA+TGG | + | chr1.4:15518123-15518142 | MS.gene59147:intron | 45.0% |
| ! | ACCAGCACTCACTCTTTTGT+TGG | - | chr1.4:15517880-15517899 | None:intergenic | 45.0% |
| ! | GAGTGCATCACCAAGTATTG+TGG | - | chr1.4:15520540-15520559 | None:intergenic | 45.0% |
| ! | TTTTTGCCATGTGTGCTAGC+TGG | + | chr1.4:15520501-15520520 | MS.gene59147:CDS | 45.0% |
| !! | GAACACTCGTATGATAGTGG+CGG | - | chr1.4:15518246-15518265 | None:intergenic | 45.0% |
| AAGGGAATTGGAGCCATTGC+AGG | - | chr1.4:15519866-15519885 | None:intergenic | 50.0% | |
| ACAAGTAGCCGATGCTGCAA+GGG | + | chr1.4:15519109-15519128 | MS.gene59147:CDS | 50.0% | |
| ACCAGCAAACCCACCAATAG+CGG | - | chr1.4:15517416-15517435 | None:intergenic | 50.0% | |
| AGGGAATTGGAGCCATTGCA+GGG | - | chr1.4:15519865-15519884 | None:intergenic | 50.0% | |
| CCCTGTATAAGGCGAACAAC+AGG | - | chr1.4:15519764-15519783 | None:intergenic | 50.0% | |
| CCCTGTTGTTCGCCTTATAC+AGG | + | chr1.4:15519760-15519779 | MS.gene59147:intron | 50.0% | |
| GAAACGTCCAACAACAGCGA+TGG | - | chr1.4:15519581-15519600 | None:intergenic | 50.0% | |
| GCACAGGCACTTCTGATTGA+AGG | + | chr1.4:15519989-15520008 | MS.gene59147:intron | 50.0% | |
| GGAACTCCTTCACCACTAGA+TGG | - | chr1.4:15519823-15519842 | None:intergenic | 50.0% | |
| GGATTCTGTAGTCCTTCCCA+GGG | + | chr1.4:15520599-15520618 | MS.gene59147:CDS | 50.0% | |
| GGGACTTAGAGATAGGCTCA+AGG | - | chr1.4:15519885-15519904 | None:intergenic | 50.0% | |
| GGGCATGTGCACAAGGAATT+CGG | - | chr1.4:15519844-15519863 | None:intergenic | 50.0% | |
| GTGAATGCCATCGCTGTTGT+TGG | + | chr1.4:15519571-15519590 | MS.gene59147:CDS | 50.0% | |
| TACAAGTAGCCGATGCTGCA+AGG | + | chr1.4:15519108-15519127 | MS.gene59147:CDS | 50.0% | |
| TGGATTCTGTAGTCCTTCCC+AGG | + | chr1.4:15520598-15520617 | MS.gene59147:CDS | 50.0% | |
| TGTCACAGACACTCCACTTG+AGG | + | chr1.4:15519163-15519182 | MS.gene59147:CDS | 50.0% | |
| !! | AGTGTGATGATAGTGCCGAC+TGG | + | chr1.4:15517382-15517401 | MS.gene59147:CDS | 50.0% |
| !! | ATGATAGTGCCGACTGGAGT+TGG | + | chr1.4:15517388-15517407 | MS.gene59147:CDS | 50.0% |
| AAGTCCCAAATCAGCAGCCG+AGG | + | chr1.4:15519898-15519917 | MS.gene59147:CDS | 55.0% | |
| ACAGGGAGTAGACCTACTGG+CGG | + | chr1.4:15519778-15519797 | MS.gene59147:intron | 55.0% | |
| ACTGGAGTTGGAGCCGCTAT+TGG | + | chr1.4:15517400-15517419 | MS.gene59147:CDS | 55.0% | |
| ATAGCGGCTCCAACTCCAGT+CGG | - | chr1.4:15517400-15517419 | None:intergenic | 55.0% | |
| GAGTTGGAGCCGCTATTGGT+GGG | + | chr1.4:15517404-15517423 | MS.gene59147:CDS | 55.0% | |
| GGGAATTGGAGCCATTGCAG+GGG | - | chr1.4:15519864-15519883 | None:intergenic | 55.0% | |
| TTCCCAGGGATGCTTGTGGA+GGG | + | chr1.4:15520613-15520632 | MS.gene59147:CDS | 55.0% | |
| TTGTGCACATGCCCCTGCAA+TGG | + | chr1.4:15519850-15519869 | MS.gene59147:CDS | 55.0% | |
| ! | AACCTCCTCGGCTGCTGATT+TGG | - | chr1.4:15519906-15519925 | None:intergenic | 55.0% |
| ! | ATTGCAGGGGCATGTGCACA+AGG | - | chr1.4:15519851-15519870 | None:intergenic | 55.0% |
| ! | GAAGAGAGAGCACGAGCAAC+AGG | - | chr1.4:15517448-15517467 | None:intergenic | 55.0% |
| !! | ACCTCCTCGGCTGCTGATTT+GGG | - | chr1.4:15519905-15519924 | None:intergenic | 55.0% |
| !! | CACTCGTATGATAGTGGCGG+AGG | - | chr1.4:15518243-15518262 | None:intergenic | 55.0% |
| !!! | GCGTGTGTTTGGTTTTGCGG+TGG | + | chr1.4:15517688-15517707 | MS.gene59147:intron | 55.0% |
| AGACCTACTGGCGGGAGTTG+AGG | + | chr1.4:15519787-15519806 | MS.gene59147:CDS | 60.0% | |
| AGGGATGCTTGTGGAGGGGA+CGG | + | chr1.4:15520618-15520637 | MS.gene59147:CDS | 60.0% | |
| CAGGGAGTAGACCTACTGGC+GGG | + | chr1.4:15519779-15519798 | MS.gene59147:intron | 60.0% | |
| CTCCACAAGCATCCCTGGGA+AGG | - | chr1.4:15520614-15520633 | None:intergenic | 60.0% | |
| CTGAGGCCAGCTAGCACACA+TGG | - | chr1.4:15520510-15520529 | None:intergenic | 60.0% | |
| CTTCCCAGGGATGCTTGTGG+AGG | + | chr1.4:15520612-15520631 | MS.gene59147:CDS | 60.0% | |
| GAGGGAAGCCCTTGCAGCAT+CGG | - | chr1.4:15519120-15519139 | None:intergenic | 60.0% | |
| GATGCTGCAAGGGCTTCCCT+CGG | + | chr1.4:15519119-15519138 | MS.gene59147:CDS | 60.0% | |
| GGAGTTGGAGCCGCTATTGG+TGG | + | chr1.4:15517403-15517422 | MS.gene59147:CDS | 60.0% | |
| GTCCTTCCCAGGGATGCTTG+TGG | + | chr1.4:15520609-15520628 | MS.gene59147:CDS | 60.0% | |
| TCCCAAATCAGCAGCCGAGG+AGG | + | chr1.4:15519901-15519920 | MS.gene59147:CDS | 60.0% | |
| TCCCAGGGATGCTTGTGGAG+GGG | + | chr1.4:15520614-15520633 | MS.gene59147:CDS | 60.0% | |
| TCCCCTCCACAAGCATCCCT+GGG | - | chr1.4:15520618-15520637 | None:intergenic | 60.0% | |
| !! | GCCGCTATTGGTGGGTTTGC+TGG | + | chr1.4:15517412-15517431 | MS.gene59147:CDS | 60.0% |
| CAGCCTCAACTCCCGCCAGT+AGG | - | chr1.4:15519793-15519812 | None:intergenic | 65.0% | |
| GGGATGCTTGTGGAGGGGAC+GGG | + | chr1.4:15520619-15520638 | MS.gene59147:CDS | 65.0% | |
| GTCCCCTCCACAAGCATCCC+TGG | - | chr1.4:15520619-15520638 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 15517170 | 15521689 | 15517170 | ID=MS.gene59147 |
| chr1.4 | mRNA | 15517170 | 15521689 | 15517170 | ID=MS.gene59147.t1;Parent=MS.gene59147 |
| chr1.4 | exon | 15517170 | 15517277 | 15517170 | ID=MS.gene59147.t1.exon1;Parent=MS.gene59147.t1 |
| chr1.4 | CDS | 15517170 | 15517277 | 15517170 | ID=cds.MS.gene59147.t1;Parent=MS.gene59147.t1 |
| chr1.4 | exon | 15517364 | 15517498 | 15517364 | ID=MS.gene59147.t1.exon2;Parent=MS.gene59147.t1 |
| chr1.4 | CDS | 15517364 | 15517498 | 15517364 | ID=cds.MS.gene59147.t1;Parent=MS.gene59147.t1 |
| chr1.4 | exon | 15518804 | 15518920 | 15518804 | ID=MS.gene59147.t1.exon3;Parent=MS.gene59147.t1 |
| chr1.4 | CDS | 15518804 | 15518920 | 15518804 | ID=cds.MS.gene59147.t1;Parent=MS.gene59147.t1 |
| chr1.4 | exon | 15519056 | 15519184 | 15519056 | ID=MS.gene59147.t1.exon4;Parent=MS.gene59147.t1 |
| chr1.4 | CDS | 15519056 | 15519184 | 15519056 | ID=cds.MS.gene59147.t1;Parent=MS.gene59147.t1 |
| chr1.4 | exon | 15519469 | 15519645 | 15519469 | ID=MS.gene59147.t1.exon5;Parent=MS.gene59147.t1 |
| chr1.4 | CDS | 15519469 | 15519645 | 15519469 | ID=cds.MS.gene59147.t1;Parent=MS.gene59147.t1 |
| chr1.4 | exon | 15519782 | 15519922 | 15519782 | ID=MS.gene59147.t1.exon6;Parent=MS.gene59147.t1 |
| chr1.4 | CDS | 15519782 | 15519922 | 15519782 | ID=cds.MS.gene59147.t1;Parent=MS.gene59147.t1 |
| chr1.4 | exon | 15520489 | 15520674 | 15520489 | ID=MS.gene59147.t1.exon7;Parent=MS.gene59147.t1 |
| chr1.4 | CDS | 15520489 | 15520674 | 15520489 | ID=cds.MS.gene59147.t1;Parent=MS.gene59147.t1 |
| chr1.4 | exon | 15520818 | 15520889 | 15520818 | ID=MS.gene59147.t1.exon8;Parent=MS.gene59147.t1 |
| chr1.4 | CDS | 15520818 | 15520889 | 15520818 | ID=cds.MS.gene59147.t1;Parent=MS.gene59147.t1 |
| chr1.4 | exon | 15521528 | 15521689 | 15521528 | ID=MS.gene59147.t1.exon9;Parent=MS.gene59147.t1 |
| chr1.4 | CDS | 15521528 | 15521689 | 15521528 | ID=cds.MS.gene59147.t1;Parent=MS.gene59147.t1 |
| Gene Sequence |
| Protein sequence |
