Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59843.t1 | XP_003628195.1 | 97 | 497 | 15 | 0 | 1 | 497 | 1 | 497 | 5.80E-279 | 969.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59843.t1 | Q5E915 | 70.1 | 485 | 140 | 3 | 1 | 485 | 1 | 480 | 6.8e-196 | 684.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59843.t1 | G7L7T0 | 97.0 | 497 | 15 | 0 | 1 | 497 | 1 | 497 | 4.2e-279 | 969.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59843 | MS.gene88509 | PPI |
| MS.gene21793 | MS.gene59843 | PPI |
| MS.gene056221 | MS.gene59843 | PPI |
| MS.gene59843 | MS.gene90863 | PPI |
| MS.gene037409 | MS.gene59843 | PPI |
| MS.gene40494 | MS.gene59843 | PPI |
| MS.gene59843 | MS.gene75146 | PPI |
| MS.gene058069 | MS.gene59843 | PPI |
| MS.gene016615 | MS.gene59843 | PPI |
| MS.gene024821 | MS.gene59843 | PPI |
| MS.gene60096 | MS.gene59843 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59843.t1 | MTR_8g045440 | 96.982 | 497 | 15 | 0 | 1 | 497 | 1 | 497 | 0.0 | 985 |
| MS.gene59843.t1 | MTR_8g041740 | 91.952 | 497 | 40 | 0 | 1 | 497 | 1 | 497 | 0.0 | 912 |
| MS.gene59843.t1 | MTR_8g045463 | 92.089 | 493 | 37 | 1 | 7 | 497 | 7 | 499 | 0.0 | 897 |
| MS.gene59843.t1 | MTR_8g045470 | 92.089 | 493 | 37 | 1 | 7 | 497 | 7 | 499 | 0.0 | 897 |
| MS.gene59843.t1 | MTR_8g045440 | 98.015 | 403 | 8 | 0 | 1 | 403 | 1 | 403 | 0.0 | 809 |
| MS.gene59843.t1 | MTR_5g069620 | 71.429 | 84 | 24 | 0 | 38 | 121 | 8 | 91 | 7.64e-35 | 126 |
| MS.gene59843.t1 | MTR_7g086360 | 25.000 | 340 | 191 | 12 | 29 | 362 | 61 | 342 | 2.17e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59843.t1 | AT3G21060 | 70.226 | 487 | 140 | 3 | 1 | 487 | 1 | 482 | 0.0 | 674 |
| MS.gene59843.t1 | AT2G43770 | 23.824 | 340 | 195 | 13 | 29 | 362 | 59 | 340 | 1.99e-13 | 72.0 |
Find 129 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGTGATTGAAGAATATT+TGG | 0.157133 | 8.3:-53998728 | MS.gene59843:CDS |
| ATGATGGAAGCTGTGTTATT+TGG | 0.213605 | 8.3:-53995690 | MS.gene59843:CDS |
| GCTACCACTTCTTCCGAAAA+TGG | 0.216044 | 8.3:+53994330 | None:intergenic |
| TTTATATTCATGCAGGTAAA+AGG | 0.246231 | 8.3:-53994543 | MS.gene59843:intron |
| CTCTCCATCACCACTGAAAC+AGG | 0.282312 | 8.3:+53994925 | None:intergenic |
| AATGATCTAACTTCATCTTT+TGG | 0.292482 | 8.3:+53995073 | None:intergenic |
| TCCTCGATCTCTTTGAAATC+AGG | 0.297441 | 8.3:+53994692 | None:intergenic |
| AAATATTCTTCAATCACTTC+TGG | 0.306044 | 8.3:+53998730 | None:intergenic |
| CGCCAAGCAGAGAGATGATT+TGG | 0.314299 | 8.3:+53995456 | None:intergenic |
| TGTGTGGCATAGTTTATATA+TGG | 0.322659 | 8.3:-53994751 | MS.gene59843:CDS |
| ATATCAGAGTCGCTGAAATT+AGG | 0.326868 | 8.3:+53994468 | None:intergenic |
| CCAGTTCTCAATGTACTCTT+TGG | 0.342536 | 8.3:+53994727 | None:intergenic |
| ACCGATAATGGAGTTGTTCA+TGG | 0.343174 | 8.3:+53999010 | None:intergenic |
| AAAAGCCTGTCTTCCTGTTC+AGG | 0.349780 | 8.3:+53994396 | None:intergenic |
| TAGATAGTTCTTCGAAGATT+GGG | 0.351030 | 8.3:-53994374 | MS.gene59843:CDS |
| GATGCCACGCTAAATCAATA+AGG | 0.351990 | 8.3:+53994804 | None:intergenic |
| GGTGATGGAGAGTGGGTTGT+TGG | 0.362512 | 8.3:-53994914 | MS.gene59843:CDS |
| CGTCGTGGTACCCTTCTTGC+TGG | 0.363760 | 8.3:-53998673 | MS.gene59843:intron |
| CTCCCATCACCAGTATTTGT+TGG | 0.370774 | 8.3:-53995615 | MS.gene59843:CDS |
| TTAGATAGTTCTTCGAAGAT+TGG | 0.374218 | 8.3:-53994375 | MS.gene59843:CDS |
| TTTACTAGCTCGTCTTCATC+CGG | 0.374685 | 8.3:-53995485 | MS.gene59843:CDS |
| TGATGGAAGCTGTGTTATTT+GGG | 0.380302 | 8.3:-53995689 | MS.gene59843:CDS |
| GAGAACCTCGGTGATCTAAA+TGG | 0.383675 | 8.3:-53995037 | MS.gene59843:CDS |
| GAACCCTTGTTGCGTGAGAC+AGG | 0.398687 | 8.3:+53995337 | None:intergenic |
| ACCATGAACAACTCCATTAT+CGG | 0.399710 | 8.3:-53999011 | MS.gene59843:intron |
| CGTGGCATGGTTCCTATCTC+TGG | 0.405425 | 8.3:-53995196 | MS.gene59843:CDS |
| ACACTTTGACCAACAAATAC+TGG | 0.409133 | 8.3:+53995606 | None:intergenic |
| CATTCCCGATGTTCCTGAAC+AGG | 0.418512 | 8.3:-53994409 | MS.gene59843:CDS |
| GTGTTTAAGTCAACAATCAT+TGG | 0.420732 | 8.3:+53995415 | None:intergenic |
| GGGCTTCCTTAGGCCCTTCA+AGG | 0.426153 | 8.3:+53994825 | None:intergenic |
| CTTGTAATTGACAGTAAAGA+TGG | 0.434768 | 8.3:-53995226 | MS.gene59843:CDS |
| ACATCGGGAATGGGAGATAC+TGG | 0.437003 | 8.3:+53994420 | None:intergenic |
| ACTACTGAACCACCAGAGAT+AGG | 0.439225 | 8.3:+53995184 | None:intergenic |
| TTGTTGCGTGAGACAGGGTT+TGG | 0.440027 | 8.3:+53995343 | None:intergenic |
| TTACTAGCTCGTCTTCATCC+GGG | 0.444533 | 8.3:-53995484 | MS.gene59843:CDS |
| GGGATGTCTTGAGTGGTAAA+AGG | 0.450323 | 8.3:-53995537 | MS.gene59843:CDS |
| GATGAAGACGAGCTAGTAAA+GGG | 0.459913 | 8.3:+53995488 | None:intergenic |
| CTGTTCAGGAACATCGGGAA+TGG | 0.462989 | 8.3:+53994410 | None:intergenic |
| AAATGAGGAGTATGTGGAGC+GGG | 0.463206 | 8.3:-53994669 | MS.gene59843:CDS |
| AGAGAAACAGACACAACAAT+TGG | 0.468488 | 8.3:+53994773 | None:intergenic |
| GATGGAGAGTGGGTTGTTGG+TGG | 0.468537 | 8.3:-53994911 | MS.gene59843:CDS |
| CTCCAAATCATCTCTCTGCT+TGG | 0.469898 | 8.3:-53995458 | MS.gene59843:CDS |
| CATGCCTCAAGTCCACTTGA+AGG | 0.471872 | 8.3:-53994288 | MS.gene59843:CDS |
| GAGAGCACAAGATTTACATA+TGG | 0.478073 | 8.3:-53994874 | MS.gene59843:CDS |
| TCTTCCTGTTCAGGAACATC+GGG | 0.478248 | 8.3:+53994405 | None:intergenic |
| TCGGAAGAAGTGGTAGCAAA+TGG | 0.478453 | 8.3:-53994324 | MS.gene59843:CDS |
| GAATCAGCTGGCTGCAATGA+TGG | 0.479058 | 8.3:-53995706 | MS.gene59843:intron |
| CATCTTGTGAAAATCCTTGA+AGG | 0.482006 | 8.3:-53994839 | MS.gene59843:CDS |
| CCAAAGAGTACATTGAGAAC+TGG | 0.483830 | 8.3:-53994727 | MS.gene59843:CDS |
| GTATGGAAACCTGGTTTATG+TGG | 0.490370 | 8.3:-53995269 | MS.gene59843:CDS |
| GTGTGGCATAGTTTATATAT+GGG | 0.499239 | 8.3:-53994750 | MS.gene59843:CDS |
| TTGAAGAATATTTGGAACAT+GGG | 0.501031 | 8.3:-53998720 | MS.gene59843:CDS |
| TGTTCAGGAACATCGGGAAT+GGG | 0.501740 | 8.3:+53994411 | None:intergenic |
| TCACATACATTATCAGTGTC+AGG | 0.503744 | 8.3:+53994626 | None:intergenic |
| TGACCAACAAATACTGGTGA+TGG | 0.505055 | 8.3:+53995612 | None:intergenic |
| GACACAACAATTGGACGTAC+AGG | 0.508623 | 8.3:+53994782 | None:intergenic |
| CGAGGAAAATGAGGAGTATG+TGG | 0.510864 | 8.3:-53994675 | MS.gene59843:CDS |
| TGAAGAACATTGTATTCAGC+AGG | 0.511366 | 8.3:-53995162 | MS.gene59843:CDS |
| ATGCCACGCTAAATCAATAA+GGG | 0.511908 | 8.3:+53994805 | None:intergenic |
| GTGATTTATACCAGCAAGAA+GGG | 0.516411 | 8.3:+53998663 | None:intergenic |
| AACATTGTATTCAGCAGGAA+TGG | 0.517859 | 8.3:-53995157 | MS.gene59843:CDS |
| GAGACAGGGTTTGGTCCACT+TGG | 0.523067 | 8.3:+53995352 | None:intergenic |
| TCACGCAACAAGGGTTCTGA+TGG | 0.523362 | 8.3:-53995331 | MS.gene59843:CDS |
| AAATCAATAAGGGCTTCCTT+AGG | 0.523475 | 8.3:+53994815 | None:intergenic |
| GGATGAAGACGAGCTAGTAA+AGG | 0.525546 | 8.3:+53995487 | None:intergenic |
| GCACCCTGTTTCAGTGGTGA+TGG | 0.531362 | 8.3:-53994929 | MS.gene59843:CDS |
| CAAAGAGATCGAGGAAAATG+AGG | 0.531580 | 8.3:-53994684 | MS.gene59843:CDS |
| GTCTTCCTGTTCAGGAACAT+CGG | 0.532676 | 8.3:+53994404 | None:intergenic |
| GTTTCAGTGGTGATGGAGAG+TGG | 0.534496 | 8.3:-53994922 | MS.gene59843:CDS |
| ATTGAAGAATATTTGGAACA+TGG | 0.536169 | 8.3:-53998721 | MS.gene59843:CDS |
| ATGTTCCTGAACAGGAAGAC+AGG | 0.551829 | 8.3:-53994401 | MS.gene59843:CDS |
| ATGCAATCACGAAAGTGCAC+TGG | 0.552939 | 8.3:-53994955 | MS.gene59843:CDS |
| AGAGCACAAGATTTACATAT+GGG | 0.555323 | 8.3:-53994873 | MS.gene59843:CDS |
| AGTGATTTATACCAGCAAGA+AGG | 0.555383 | 8.3:+53998662 | None:intergenic |
| GAAAATCCTTGAAGGGCCTA+AGG | 0.556664 | 8.3:-53994831 | MS.gene59843:CDS |
| AACCCTTGTTGCGTGAGACA+GGG | 0.563354 | 8.3:+53995338 | None:intergenic |
| CAAGCAGAGAGATGATTTGG+AGG | 0.566086 | 8.3:+53995459 | None:intergenic |
| GTTGTGTCTGTTTCTCTGTG+TGG | 0.566133 | 8.3:-53994767 | MS.gene59843:CDS |
| TACTAGCTCGTCTTCATCCG+GGG | 0.567258 | 8.3:-53995483 | MS.gene59843:CDS |
| CTTCAAGTGGACTTGAGGCA+TGG | 0.571372 | 8.3:+53994289 | None:intergenic |
| AGATAGTTCTTCGAAGATTG+GGG | 0.573049 | 8.3:-53994373 | MS.gene59843:CDS |
| AAACCCTGTCTCACGCAACA+AGG | 0.574516 | 8.3:-53995341 | MS.gene59843:CDS |
| ATTGGGGACAGCAATAACTC+TGG | 0.576784 | 8.3:-53994357 | MS.gene59843:CDS |
| TTTCAGTGGTGATGGAGAGT+GGG | 0.579791 | 8.3:-53994921 | MS.gene59843:CDS |
| TGGAAGGCACCCTGTTTCAG+TGG | 0.579970 | 8.3:-53994935 | MS.gene59843:CDS |
| ATTTACATATGGGATAGAGC+TGG | 0.580981 | 8.3:-53994863 | MS.gene59843:CDS |
| ATTACCTTCAAGTGGACTTG+AGG | 0.584311 | 8.3:+53994284 | None:intergenic |
| TCGAGTTTCCCACATAAACC+AGG | 0.588345 | 8.3:+53995260 | None:intergenic |
| AAATGGTGTTGAGAAGTTGA+AGG | 0.591187 | 8.3:-53995020 | MS.gene59843:CDS |
| ATCTGATGTCAATGAAGATG+AGG | 0.592161 | 8.3:-53994520 | MS.gene59843:CDS |
| GTTGGTGGTTCTGCTAGCAA+AGG | 0.593351 | 8.3:-53994896 | MS.gene59843:CDS |
| GGCGTGACATTACCTTCAAG+TGG | 0.593844 | 8.3:+53994276 | None:intergenic |
| TTACTAAAACATGCAGCAGT+AGG | 0.595182 | 8.3:+53995292 | None:intergenic |
| GACCAACAAATACTGGTGAT+GGG | 0.601286 | 8.3:+53995613 | None:intergenic |
| TAGATAACGTAGCTCTTCCT+CGG | 0.601900 | 8.3:+53994443 | None:intergenic |
| ATCTTGTGAAAATCCTTGAA+GGG | 0.602213 | 8.3:-53994838 | MS.gene59843:CDS |
| ACATGCAGCAGTAGGTGTGA+AGG | 0.605285 | 8.3:+53995300 | None:intergenic |
| AGATGGTGAGGTGCGTGGCA+TGG | 0.609126 | 8.3:-53995209 | MS.gene59843:CDS |
| TATGGAAACCTGGTTTATGT+GGG | 0.609917 | 8.3:-53995268 | MS.gene59843:CDS |
| TCCTGATTTCAAAGAGATCG+AGG | 0.611456 | 8.3:-53994693 | MS.gene59843:CDS |
| GGCATGGTTCCTATCTCTGG+TGG | 0.613251 | 8.3:-53995193 | MS.gene59843:CDS |
| TGACAAGTCGTTATCCCTGT+GGG | 0.614779 | 8.3:-53995557 | MS.gene59843:CDS |
| TACCACTCAAGACATCCCAC+AGG | 0.615382 | 8.3:+53995542 | None:intergenic |
| AACCCTGTCTCACGCAACAA+GGG | 0.615851 | 8.3:-53995340 | MS.gene59843:CDS |
| AGAGATGATTTGGAGGACCC+CGG | 0.619630 | 8.3:+53995466 | None:intergenic |
| TGACATTGTGACAGTCGAGA+AGG | 0.620507 | 8.3:-53994493 | MS.gene59843:CDS |
| GATGTTGAAGATCCGTTGCA+AGG | 0.623904 | 8.3:-53998760 | MS.gene59843:intron |
| AGTATTTGTTGGTCAAAGTG+TGG | 0.624701 | 8.3:-53995604 | MS.gene59843:CDS |
| CTGACAAGTCGTTATCCCTG+TGG | 0.627369 | 8.3:-53995558 | MS.gene59843:CDS |
| GTTTATGTGGGAAACTCGAA+AGG | 0.631466 | 8.3:-53995256 | MS.gene59843:CDS |
| TGATTGCATCTTGAAACTCA+CGG | 0.633891 | 8.3:+53994969 | None:intergenic |
| ATCATTGGAGCACATGAGAG+AGG | 0.635797 | 8.3:+53995430 | None:intergenic |
| TCTGGAAAATCACCTTGCAA+CGG | 0.637632 | 8.3:+53998748 | None:intergenic |
| TCTCCATCACCACTGAAACA+GGG | 0.640101 | 8.3:+53994926 | None:intergenic |
| TGTATTGCTTTCAATCGTCG+TGG | 0.644491 | 8.3:-53998688 | MS.gene59843:CDS |
| TCCCTGTGGGATGTCTTGAG+TGG | 0.645082 | 8.3:-53995544 | MS.gene59843:CDS |
| AAAATGAGGAGTATGTGGAG+CGG | 0.646092 | 8.3:-53994670 | MS.gene59843:CDS |
| TCTGTCTCTGACAAACCAAG+TGG | 0.648181 | 8.3:-53995367 | MS.gene59843:CDS |
| AAGCCCTTATTGATTTAGCG+TGG | 0.655079 | 8.3:-53994808 | MS.gene59843:CDS |
| TGCAGCAGTAGGTGTGAAGG+AGG | 0.657772 | 8.3:+53995303 | None:intergenic |
| ACCACTCAAGACATCCCACA+GGG | 0.671936 | 8.3:+53995543 | None:intergenic |
| CAGCGACTCTGATATGTCCG+AGG | 0.676024 | 8.3:-53994460 | MS.gene59843:CDS |
| GTTGAGAAGTTGAAGGCTGT+AGG | 0.680893 | 8.3:-53995013 | MS.gene59843:CDS |
| GCTGAACTGAACGAGAACCT+CGG | 0.686702 | 8.3:-53995049 | MS.gene59843:CDS |
| AGTAAAGATGGTGAGGTGCG+TGG | 0.690847 | 8.3:-53995214 | MS.gene59843:CDS |
| AATCACGAAAGTGCACTGGA+AGG | 0.694138 | 8.3:-53994951 | MS.gene59843:CDS |
| AATTGACAGTAAAGATGGTG+AGG | 0.704790 | 8.3:-53995221 | MS.gene59843:CDS |
| ATGAAGACGAGCTAGTAAAG+GGG | 0.710400 | 8.3:+53995489 | None:intergenic |
| CAACACCATTTAGATCACCG+AGG | 0.738329 | 8.3:+53995032 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTATTATGTAAAATTTAAA+GGG | - | chr8.3:53995033-53995052 | MS.gene59843:CDS | 10.0% |
| !! | TTGTATTATGTAAAATTTAA+AGG | - | chr8.3:53995032-53995051 | MS.gene59843:CDS | 10.0% |
| !!! | AAATTTGATTTTTTATCTTA+GGG | - | chr8.3:53994727-53994746 | MS.gene59843:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTAACTTCT+TGG | - | chr8.3:53996308-53996327 | MS.gene59843:intron | 10.0% |
| !! | AAAGCTTATTTACTTTATAA+TGG | - | chr8.3:53996346-53996365 | MS.gene59843:intron | 15.0% |
| !! | CATAATATATGTAATGATTA+GGG | - | chr8.3:53994320-53994339 | MS.gene59843:CDS | 15.0% |
| !! | CTTAAAACTTTACTTTATAA+TGG | - | chr8.3:53995470-53995489 | MS.gene59843:CDS | 15.0% |
| !! | TAATAATGAACTTTGATTAT+TGG | - | chr8.3:53996385-53996404 | MS.gene59843:intron | 15.0% |
| !! | TATAAAGTAAATAAGCTTTA+GGG | + | chr8.3:53996345-53996364 | None:intergenic | 15.0% |
| !! | TCATAATATATGTAATGATT+AGG | - | chr8.3:53994319-53994338 | MS.gene59843:CDS | 15.0% |
| !! | TGATTTAAGAAAAAAAAAAG+AGG | - | chr8.3:53995768-53995787 | MS.gene59843:intron | 15.0% |
| !! | TTATAAAGTAAATAAGCTTT+AGG | + | chr8.3:53996346-53996365 | None:intergenic | 15.0% |
| !!! | AAATTCTAGCATTTTAATTT+GGG | - | chr8.3:53995964-53995983 | MS.gene59843:intron | 15.0% |
| !!! | AATGTTATTAATTATGGTTT+TGG | - | chr8.3:53994483-53994502 | MS.gene59843:CDS | 15.0% |
| !!! | CAAATTTGATTTTTTATCTT+AGG | - | chr8.3:53994726-53994745 | MS.gene59843:CDS | 15.0% |
| !!! | GTATTTAATTTGTATATGTA+AGG | - | chr8.3:53996610-53996629 | MS.gene59843:intron | 15.0% |
| !!! | GTGTTTTTTATTTTATTTCA+GGG | - | chr8.3:53994868-53994887 | MS.gene59843:CDS | 15.0% |
| !!! | GTTATTTTCAAAAAATCATT+AGG | - | chr8.3:53997118-53997137 | MS.gene59843:intron | 15.0% |
| !!! | TAAATTCTAGCATTTTAATT+TGG | - | chr8.3:53995963-53995982 | MS.gene59843:intron | 15.0% |
| !!! | TCTGATAATGTTATTAATTA+TGG | - | chr8.3:53994477-53994496 | MS.gene59843:CDS | 15.0% |
| !!! | TGTGTTTTTTATTTTATTTC+AGG | - | chr8.3:53994867-53994886 | MS.gene59843:CDS | 15.0% |
| !!! | TGTTTTTTATTTTATTTCAG+GGG | - | chr8.3:53994869-53994888 | MS.gene59843:CDS | 15.0% |
| !!! | TTTTTTGAAAATAACAAAGT+TGG | + | chr8.3:53997113-53997132 | None:intergenic | 15.0% |
| !! | ACATAGATCTTACAATATAT+TGG | - | chr8.3:53996587-53996606 | MS.gene59843:intron | 20.0% |
| !! | AGTGACATAAATAAAACATT+AGG | + | chr8.3:53994417-53994436 | None:intergenic | 20.0% |
| !! | ATTGTTTCATTAAACTTTGA+AGG | - | chr8.3:53996487-53996506 | MS.gene59843:intron | 20.0% |
| !! | CATAGATCTTACAATATATT+GGG | - | chr8.3:53996588-53996607 | MS.gene59843:intron | 20.0% |
| !! | CATCCAGTAAAAATAATATT+TGG | + | chr8.3:53994801-53994820 | None:intergenic | 20.0% |
| !! | GTGACATAAATAAAACATTA+GGG | + | chr8.3:53994416-53994435 | None:intergenic | 20.0% |
| !! | TATGGAAAGTAAAAAGATAT+TGG | - | chr8.3:53997036-53997055 | MS.gene59843:intron | 20.0% |
| !! | TTTCAAACCAACATAAAAAA+GGG | + | chr8.3:53994941-53994960 | None:intergenic | 20.0% |
| !!! | AATATTATTTTTACTGGATG+TGG | - | chr8.3:53994801-53994820 | MS.gene59843:CDS | 20.0% |
| !!! | ACTATATTTATTTTCCTAGT+GGG | - | chr8.3:53997320-53997339 | MS.gene59843:intron | 20.0% |
| !!! | AGTGATATCAAATTTTTTGA+TGG | + | chr8.3:53995162-53995181 | None:intergenic | 20.0% |
| !!! | GTAAGTAAATTATGATTTTG+TGG | + | chr8.3:53994394-53994413 | None:intergenic | 20.0% |
| !!! | GTATACTCAGAAATTTTTTA+TGG | + | chr8.3:53997302-53997321 | None:intergenic | 20.0% |
| !!! | TACTATATTTATTTTCCTAG+TGG | - | chr8.3:53997319-53997338 | MS.gene59843:intron | 20.0% |
| !!! | TGATAATCATTTTGAGAAAT+TGG | + | chr8.3:53994302-53994321 | None:intergenic | 20.0% |
| !!! | TTCTTTTCTTTTCCATTTTA+TGG | - | chr8.3:53998688-53998707 | MS.gene59843:CDS | 20.0% |
| !!! | TTGCCAAATATTATTTTTAC+TGG | - | chr8.3:53994795-53994814 | MS.gene59843:CDS | 20.0% |
| !!! | TTTGTCTTTTTATCATAAAC+CGG | + | chr8.3:53994710-53994729 | None:intergenic | 20.0% |
| !!! | TTTTCAAACCAACATAAAAA+AGG | + | chr8.3:53994942-53994961 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTAACTTCTTGG+TGG | - | chr8.3:53996311-53996330 | MS.gene59843:intron | 20.0% |
| ! | AAAATTTGATATCACTGTGA+CGG | - | chr8.3:53995166-53995185 | MS.gene59843:CDS | 25.0% |
| ! | AAATATTCTTCAATCACTTC+TGG | + | chr8.3:53994538-53994557 | None:intergenic | 25.0% |
| ! | AGAAGTGATTGAAGAATATT+TGG | - | chr8.3:53994537-53994556 | MS.gene59843:intron | 25.0% |
| ! | ATATTGTATTAACACACACA+TGG | + | chr8.3:53996456-53996475 | None:intergenic | 25.0% |
| ! | ATGAAGAATCCAAAATTACA+CGG | - | chr8.3:53994832-53994851 | MS.gene59843:CDS | 25.0% |
| ! | ATTTGATAAATTGAATCAGC+TGG | - | chr8.3:53997547-53997566 | MS.gene59843:intron | 25.0% |
| ! | CAAATAAAAAACAGTGTGAA+TGG | + | chr8.3:53995445-53995464 | None:intergenic | 25.0% |
| ! | TAAAATTACAAGGTTATTCG+AGG | - | chr8.3:53994909-53994928 | MS.gene59843:CDS | 25.0% |
| ! | TCATTGCATTACAATAGAAT+TGG | + | chr8.3:53996970-53996989 | None:intergenic | 25.0% |
| ! | TCTATATCACATTGATACTA+GGG | - | chr8.3:53996892-53996911 | MS.gene59843:intron | 25.0% |
| ! | TTTATATTCATGCAGGTAAA+AGG | - | chr8.3:53998722-53998741 | MS.gene59843:CDS | 25.0% |
| !! | AATAAGTTGAGGGAAAATTT+GGG | + | chr8.3:53996271-53996290 | None:intergenic | 25.0% |
| !! | AATGATCTAACTTCATCTTT+TGG | + | chr8.3:53998195-53998214 | None:intergenic | 25.0% |
| !! | ATTGAAGAATATTTGGAACA+TGG | - | chr8.3:53994544-53994563 | MS.gene59843:intron | 25.0% |
| !! | TCCAACATTTTTCCTAATTA+GGG | + | chr8.3:53996647-53996666 | None:intergenic | 25.0% |
| !! | TTGAAGAATATTTGGAACAT+GGG | - | chr8.3:53994545-53994564 | MS.gene59843:intron | 25.0% |
| !! | TTGCTATTGATATGATTGTA+TGG | - | chr8.3:53997018-53997037 | MS.gene59843:intron | 25.0% |
| !!! | AAATTTAAAGGGTTTTATCG+AGG | - | chr8.3:53995044-53995063 | MS.gene59843:CDS | 25.0% |
| !!! | CATTCACACTGTTTTTTATT+TGG | - | chr8.3:53995443-53995462 | MS.gene59843:CDS | 25.0% |
| !!! | TAGTTTTCTGTATTGATATC+CGG | - | chr8.3:53996869-53996888 | MS.gene59843:intron | 25.0% |
| AACAAACACAATATTCAGTC+AGG | + | chr8.3:53995691-53995710 | None:intergenic | 30.0% | |
| AACCAAGTTTATATTCATGC+AGG | - | chr8.3:53998715-53998734 | MS.gene59843:CDS | 30.0% | |
| ACAAACACAATATTCAGTCA+GGG | + | chr8.3:53995690-53995709 | None:intergenic | 30.0% | |
| ACTTGGTTAAGACCATAAAA+TGG | + | chr8.3:53998703-53998722 | None:intergenic | 30.0% | |
| AGAGAAAAACTAACCGATAA+TGG | + | chr8.3:53994270-53994289 | None:intergenic | 30.0% | |
| AGAGCACAAGATTTACATAT+GGG | - | chr8.3:53998392-53998411 | MS.gene59843:intron | 30.0% | |
| AGTATCAATGTGATATAGAC+CGG | + | chr8.3:53996891-53996910 | None:intergenic | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | - | chr8.3:53998427-53998446 | MS.gene59843:intron | 30.0% | |
| CCTATCTCTGTAGTAAATAA+CGG | - | chr8.3:53996144-53996163 | MS.gene59843:intron | 30.0% | |
| CTTCACATTGTATAGAATTG+TGG | - | chr8.3:53995092-53995111 | MS.gene59843:CDS | 30.0% | |
| CTTGTAATTGACAGTAAAGA+TGG | - | chr8.3:53998039-53998058 | MS.gene59843:intron | 30.0% | |
| GTCTATATCACATTGATACT+AGG | - | chr8.3:53996891-53996910 | MS.gene59843:intron | 30.0% | |
| GTGTGGCATAGTTTATATAT+GGG | - | chr8.3:53998515-53998534 | MS.gene59843:intron | 30.0% | |
| GTGTTTAAGTCAACAATCAT+TGG | + | chr8.3:53997853-53997872 | None:intergenic | 30.0% | |
| GTTTGAACCATTTGAAAACT+CGG | - | chr8.3:53995200-53995219 | MS.gene59843:CDS | 30.0% | |
| TAATGTATGTGAGCGTTATA+TGG | - | chr8.3:53998650-53998669 | MS.gene59843:intron | 30.0% | |
| TACCTGCATGAATATAAACT+TGG | + | chr8.3:53998720-53998739 | None:intergenic | 30.0% | |
| TAGATAGTTCTTCGAAGATT+GGG | - | chr8.3:53998891-53998910 | MS.gene59843:intron | 30.0% | |
| TATAGCCATAAATCTGCAAT+TGG | + | chr8.3:53996678-53996697 | None:intergenic | 30.0% | |
| TATAGCTGTATAGTGTGTAA+CGG | + | chr8.3:53996523-53996542 | None:intergenic | 30.0% | |
| TCTATGTGTTCAATGAAGAA+CGG | + | chr8.3:53996574-53996593 | None:intergenic | 30.0% | |
| TCTCCAAACAAAAATTTACC+AGG | + | chr8.3:53996042-53996061 | None:intergenic | 30.0% | |
| TGAAGAATCCAAAATTACAC+GGG | - | chr8.3:53994833-53994852 | MS.gene59843:CDS | 30.0% | |
| TGTGAATGGTAATAACTTGA+GGG | + | chr8.3:53995431-53995450 | None:intergenic | 30.0% | |
| TGTGTGGCATAGTTTATATA+TGG | - | chr8.3:53998514-53998533 | MS.gene59843:intron | 30.0% | |
| TGTGTTGCATGTAATCTATT+TGG | - | chr8.3:53997245-53997264 | MS.gene59843:intron | 30.0% | |
| TTAGATAGTTCTTCGAAGAT+TGG | - | chr8.3:53998890-53998909 | MS.gene59843:intron | 30.0% | |
| TTAGTGAGTGTATATCTTTC+TGG | - | chr8.3:53997363-53997382 | MS.gene59843:intron | 30.0% | |
| TTATTCCTTGTAGCAAATAG+CGG | - | chr8.3:53995306-53995325 | MS.gene59843:CDS | 30.0% | |
| TTTGAACCATTTGAAAACTC+GGG | - | chr8.3:53995201-53995220 | MS.gene59843:CDS | 30.0% | |
| TTTGTATATGTAAGGTCGAT+TGG | - | chr8.3:53996618-53996637 | MS.gene59843:intron | 30.0% | |
| ! | ACTATACAGCTATAGCATTT+TGG | - | chr8.3:53996529-53996548 | MS.gene59843:intron | 30.0% |
| ! | CAATAAGTTGAGGGAAAATT+TGG | + | chr8.3:53996272-53996291 | None:intergenic | 30.0% |
| ! | CATGAATGACAATAAGTTGA+GGG | + | chr8.3:53996281-53996300 | None:intergenic | 30.0% |
| ! | CTCCAACATTTTTCCTAATT+AGG | + | chr8.3:53996648-53996667 | None:intergenic | 30.0% |
| ! | TATACCTTTATCCTGTTTTC+TGG | - | chr8.3:53996943-53996962 | MS.gene59843:intron | 30.0% |
| ! | TTAGGTTGTAAACATTCAAG+TGG | - | chr8.3:53997136-53997155 | MS.gene59843:intron | 30.0% |
| ! | TTCATTAAACTTTGAAGGAG+TGG | - | chr8.3:53996492-53996511 | MS.gene59843:intron | 30.0% |
| ! | TTTTAGTAAGTATGGAAACC+TGG | - | chr8.3:53997987-53998006 | MS.gene59843:intron | 30.0% |
| !! | AAAGATATTGGTTCTGTCAA+TGG | - | chr8.3:53997048-53997067 | MS.gene59843:intron | 30.0% |
| !! | AATAACTTGAGGGCATATTT+TGG | + | chr8.3:53995421-53995440 | None:intergenic | 30.0% |
| !! | ATAACCTTGTAATTTTAGCG+AGG | + | chr8.3:53994906-53994925 | None:intergenic | 30.0% |
| !!! | GTATTAGCCCTTTTTTATGT+TGG | - | chr8.3:53994931-53994950 | MS.gene59843:CDS | 30.0% |
| !!! | TATTTGGGATTTTGAAGTCA+GGG | - | chr8.3:53997591-53997610 | MS.gene59843:intron | 30.0% |
| !!! | TTATTTGGGATTTTGAAGTC+AGG | - | chr8.3:53997590-53997609 | MS.gene59843:intron | 30.0% |
| !!! | TTTTGTGCTGGTTTGAAAAA+TGG | - | chr8.3:53994642-53994661 | MS.gene59843:CDS | 30.0% |
| AAAAACACACCAAAATGGGT+AGG | + | chr8.3:53995539-53995558 | None:intergenic | 35.0% | |
| AAACTCATCCCAAAAGGTTT+AGG | + | chr8.3:53997211-53997230 | None:intergenic | 35.0% | |
| AAATCAATAAGGGCTTCCTT+AGG | + | chr8.3:53998453-53998472 | None:intergenic | 35.0% | |
| AACATTGTATTCAGCAGGAA+TGG | - | chr8.3:53998108-53998127 | MS.gene59843:intron | 35.0% | |
| AAGTGCATGAAGGAAATACA+AGG | + | chr8.3:53995714-53995733 | None:intergenic | 35.0% | |
| AATTGACAGTAAAGATGGTG+AGG | - | chr8.3:53998044-53998063 | MS.gene59843:intron | 35.0% | |
| AATTTCTGCAGTTTCTGTCA+AGG | - | chr8.3:53996785-53996804 | MS.gene59843:intron | 35.0% | |
| ACACTTTGACCAACAAATAC+TGG | + | chr8.3:53997662-53997681 | None:intergenic | 35.0% | |
| ACAGGAAAAACACACCAAAA+TGG | + | chr8.3:53995544-53995563 | None:intergenic | 35.0% | |
| ACCTGAAATTTAATCCCACT+AGG | + | chr8.3:53997337-53997356 | None:intergenic | 35.0% | |
| AGAGAAACAGACACAACAAT+TGG | + | chr8.3:53998495-53998514 | None:intergenic | 35.0% | |
| AGATAGTTCTTCGAAGATTG+GGG | - | chr8.3:53998892-53998911 | MS.gene59843:intron | 35.0% | |
| AGCTTGATTCTAGACTTGAT+TGG | - | chr8.3:53995826-53995845 | MS.gene59843:intron | 35.0% | |
| AGTAACATGAGTGAGAAAGT+TGG | + | chr8.3:53997525-53997544 | None:intergenic | 35.0% | |
| AGTGATTTATACCAGCAAGA+AGG | + | chr8.3:53994606-53994625 | None:intergenic | 35.0% | |
| ATAGAATTGGACCAGAAAAC+AGG | + | chr8.3:53996957-53996976 | None:intergenic | 35.0% | |
| ATATCAGAGTCGCTGAAATT+AGG | + | chr8.3:53998800-53998819 | None:intergenic | 35.0% | |
| ATCTGATGTCAATGAAGATG+AGG | - | chr8.3:53998745-53998764 | MS.gene59843:CDS | 35.0% | |
| ATGCCACGCTAAATCAATAA+GGG | + | chr8.3:53998463-53998482 | None:intergenic | 35.0% | |
| ATGTGCACTTTGTAAGTCTT+GGG | - | chr8.3:53995638-53995657 | MS.gene59843:CDS | 35.0% | |
| ATTTACATATGGGATAGAGC+TGG | - | chr8.3:53998402-53998421 | MS.gene59843:intron | 35.0% | |
| ATTTACTACAGAGATAGGCT+TGG | + | chr8.3:53996142-53996161 | None:intergenic | 35.0% | |
| CAGGAAAAACACACCAAAAT+GGG | + | chr8.3:53995543-53995562 | None:intergenic | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | - | chr8.3:53998426-53998445 | MS.gene59843:intron | 35.0% | |
| CCGTTATTTACTACAGAGAT+AGG | + | chr8.3:53996147-53996166 | None:intergenic | 35.0% | |
| GATTGCCAATTGCAGATTTA+TGG | - | chr8.3:53996670-53996689 | MS.gene59843:intron | 35.0% | |
| GCATGAATGACAATAAGTTG+AGG | + | chr8.3:53996282-53996301 | None:intergenic | 35.0% | |
| GCCCTAATTAGGAAAAATGT+TGG | - | chr8.3:53996643-53996662 | MS.gene59843:intron | 35.0% | |
| GCTATAATTGATGCCAAGTT+AGG | - | chr8.3:53996692-53996711 | MS.gene59843:intron | 35.0% | |
| GTGATTTATACCAGCAAGAA+GGG | + | chr8.3:53994605-53994624 | None:intergenic | 35.0% | |
| GTGTGAATGGTAATAACTTG+AGG | + | chr8.3:53995432-53995451 | None:intergenic | 35.0% | |
| TAGTTGGTCAGGAAAGAAAT+AGG | - | chr8.3:53994997-53995016 | MS.gene59843:CDS | 35.0% | |
| TATGGAAACCTGGTTTATGT+GGG | - | chr8.3:53997997-53998016 | MS.gene59843:intron | 35.0% | |
| TATTCCTCTGCTATGCTATT+TGG | + | chr8.3:53995359-53995378 | None:intergenic | 35.0% | |
| TATTCGACTGCTATGCTATT+TGG | + | chr8.3:53996209-53996228 | None:intergenic | 35.0% | |
| TCACAAGAACTTCACTATAG+CGG | + | chr8.3:53995395-53995414 | None:intergenic | 35.0% | |
| TCACATACATTATCAGTGTC+AGG | + | chr8.3:53998642-53998661 | None:intergenic | 35.0% | |
| TCCTAGTGGGATTAAATTTC+AGG | - | chr8.3:53997333-53997352 | MS.gene59843:intron | 35.0% | |
| TGAAGAACATTGTATTCAGC+AGG | - | chr8.3:53998103-53998122 | MS.gene59843:intron | 35.0% | |
| TGATTGCATCTTGAAACTCA+CGG | + | chr8.3:53998299-53998318 | None:intergenic | 35.0% | |
| TTACAAGGTAATTGGACTCT+GGG | + | chr8.3:53996759-53996778 | None:intergenic | 35.0% | |
| TTACTAAAACATGCAGCAGT+AGG | + | chr8.3:53997976-53997995 | None:intergenic | 35.0% | |
| TTGAGACCTTACAAGGTAAT+TGG | + | chr8.3:53996767-53996786 | None:intergenic | 35.0% | |
| ! | AGTATTTGTTGGTCAAAGTG+TGG | - | chr8.3:53997661-53997680 | MS.gene59843:intron | 35.0% |
| ! | ATACAGCTATAGCATTTTGG+TGG | - | chr8.3:53996532-53996551 | MS.gene59843:intron | 35.0% |
| ! | ATGATGGAAGCTGTGTTATT+TGG | - | chr8.3:53997575-53997594 | MS.gene59843:intron | 35.0% |
| ! | CAAGGTTTGAAGTGTGTATA+AGG | - | chr8.3:53996803-53996822 | MS.gene59843:intron | 35.0% |
| ! | CAGCCTGGTAAATTTTTGTT+TGG | - | chr8.3:53996036-53996055 | MS.gene59843:intron | 35.0% |
| ! | GAGAGCACAAGATTTACATA+TGG | - | chr8.3:53998391-53998410 | MS.gene59843:intron | 35.0% |
| ! | GATCTAACTTCATCTTTTGG+TGG | + | chr8.3:53998192-53998211 | None:intergenic | 35.0% |
| ! | GTCAACTACCTAAACCTTTT+GGG | - | chr8.3:53997200-53997219 | MS.gene59843:intron | 35.0% |
| ! | GTTTGAAGTGTGTATAAGGA+GGG | - | chr8.3:53996807-53996826 | MS.gene59843:intron | 35.0% |
| ! | TAACTCTGGATCACCATTTT+CGG | - | chr8.3:53998922-53998941 | MS.gene59843:intron | 35.0% |
| ! | TGTCAACTACCTAAACCTTT+TGG | - | chr8.3:53997199-53997218 | MS.gene59843:intron | 35.0% |
| !! | AGAAAAAAGCACCCACAAAT+TGG | + | chr8.3:53995613-53995632 | None:intergenic | 35.0% |
| !! | CTATAGCATTTTGGTGGTTT+TGG | - | chr8.3:53996538-53996557 | MS.gene59843:intron | 35.0% |
| !! | GAGATTTGTTCCTCGTTTTA+CGG | - | chr8.3:53997083-53997102 | MS.gene59843:intron | 35.0% |
| !! | TAAATAAGCTTTAGGGCGAA+AGG | + | chr8.3:53996338-53996357 | None:intergenic | 35.0% |
| !! | TAAGCTGATTTTGTACGCAA+GGG | - | chr8.3:53996064-53996083 | MS.gene59843:intron | 35.0% |
| !! | TCCACTTAGATTTGGTTCTT+GGG | - | chr8.3:53995573-53995592 | MS.gene59843:CDS | 35.0% |
| !! | TGATGGAAGCTGTGTTATTT+GGG | - | chr8.3:53997576-53997595 | MS.gene59843:intron | 35.0% |
| !!! | ATTTGGGATTTTGAAGTCAG+GGG | - | chr8.3:53997592-53997611 | MS.gene59843:intron | 35.0% |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | - | chr8.3:53997979-53997998 | MS.gene59843:intron | 35.0% |
| !!! | TAAACCTTTTGGGATGAGTT+TGG | - | chr8.3:53997210-53997229 | MS.gene59843:intron | 35.0% |
| AGAATCCAAAATTACACGGG+TGG | - | chr8.3:53994836-53994855 | MS.gene59843:CDS | 40.0% | |
| AGTTGGATTACCGTAAAACG+AGG | + | chr8.3:53997096-53997115 | None:intergenic | 40.0% | |
| ATGAAGACGAGCTAGTAAAG+GGG | + | chr8.3:53997779-53997798 | None:intergenic | 40.0% | |
| ATGTGGTGTCCACTTAGATT+TGG | - | chr8.3:53995565-53995584 | MS.gene59843:CDS | 40.0% | |
| ATGTGTTCAATGAAGAACGG+CGG | + | chr8.3:53996571-53996590 | None:intergenic | 40.0% | |
| ATTTACCAGGCTGCTCTATT+TGG | + | chr8.3:53996029-53996048 | None:intergenic | 40.0% | |
| CAAAATACCCTTGCTCTAGT+TGG | - | chr8.3:53994981-53995000 | MS.gene59843:CDS | 40.0% | |
| CAAAGAGATCGAGGAAAATG+AGG | - | chr8.3:53998581-53998600 | MS.gene59843:intron | 40.0% | |
| CACAATATTCAGTCAGGGAA+AGG | + | chr8.3:53995685-53995704 | None:intergenic | 40.0% | |
| CACTTTGTAAGTCTTGGGAT+TGG | - | chr8.3:53995643-53995662 | MS.gene59843:CDS | 40.0% | |
| CAGACCTCGCTAAAATTACA+AGG | - | chr8.3:53994899-53994918 | MS.gene59843:CDS | 40.0% | |
| CAGAGTCCAATTACCTTGTA+AGG | - | chr8.3:53996758-53996777 | MS.gene59843:intron | 40.0% | |
| CATGTGCACTTTGTAAGTCT+TGG | - | chr8.3:53995637-53995656 | MS.gene59843:CDS | 40.0% | |
| CCAGTTCTCAATGTACTCTT+TGG | + | chr8.3:53998541-53998560 | None:intergenic | 40.0% | |
| CTGTATAGTGTGTAACGGTA+TGG | + | chr8.3:53996518-53996537 | None:intergenic | 40.0% | |
| CTTACAAGGTAATTGGACTC+TGG | + | chr8.3:53996760-53996779 | None:intergenic | 40.0% | |
| GACCAACAAATACTGGTGAT+GGG | + | chr8.3:53997655-53997674 | None:intergenic | 40.0% | |
| GATGAAGACGAGCTAGTAAA+GGG | + | chr8.3:53997780-53997799 | None:intergenic | 40.0% | |
| GATGCCACGCTAAATCAATA+AGG | + | chr8.3:53998464-53998483 | None:intergenic | 40.0% | |
| GCAGAAATTGAGACCTTACA+AGG | + | chr8.3:53996774-53996793 | None:intergenic | 40.0% | |
| GGGTTTCTGCTAATGATTGT+GGG | - | chr8.3:53995221-53995240 | MS.gene59843:CDS | 40.0% | |
| GTAAATAACGGCTGCTATAG+TGG | - | chr8.3:53996156-53996175 | MS.gene59843:intron | 40.0% | |
| GTATGGAAACCTGGTTTATG+TGG | - | chr8.3:53997996-53998015 | MS.gene59843:intron | 40.0% | |
| GTTTATGTGGGAAACTCGAA+AGG | - | chr8.3:53998009-53998028 | MS.gene59843:intron | 40.0% | |
| TAGATAACGTAGCTCTTCCT+CGG | + | chr8.3:53998825-53998844 | None:intergenic | 40.0% | |
| TCCTGATTTCAAAGAGATCG+AGG | - | chr8.3:53998572-53998591 | MS.gene59843:intron | 40.0% | |
| TCTGGAAAATCACCTTGCAA+CGG | + | chr8.3:53994520-53994539 | None:intergenic | 40.0% | |
| TGACCAACAAATACTGGTGA+TGG | + | chr8.3:53997656-53997675 | None:intergenic | 40.0% | |
| TGGACCAGAAAACAGGATAA+AGG | + | chr8.3:53996950-53996969 | None:intergenic | 40.0% | |
| TGTATTGCTTTCAATCGTCG+TGG | - | chr8.3:53994577-53994596 | MS.gene59843:intron | 40.0% | |
| TGTGAGCGTTATATGGTCAT+AGG | - | chr8.3:53998657-53998676 | MS.gene59843:intron | 40.0% | |
| TTTACTAGCTCGTCTTCATC+CGG | - | chr8.3:53997780-53997799 | MS.gene59843:intron | 40.0% | |
| ! | AAAATGAGGAGTATGTGGAG+CGG | - | chr8.3:53998595-53998614 | MS.gene59843:intron | 40.0% |
| ! | AACAGAGAGTATGCCTAACT+TGG | + | chr8.3:53996708-53996727 | None:intergenic | 40.0% |
| ! | AGATTCCACCCGTGTAATTT+TGG | + | chr8.3:53994844-53994863 | None:intergenic | 40.0% |
| ! | AGCGGTTTTTGTCCAATTTG+TGG | - | chr8.3:53995598-53995617 | MS.gene59843:CDS | 40.0% |
| ! | ATCACCATTTTCGGAAGAAG+TGG | - | chr8.3:53998931-53998950 | MS.gene59843:intron | 40.0% |
| ! | ATTACCTTCAAGTGGACTTG+AGG | + | chr8.3:53998984-53999003 | None:intergenic | 40.0% |
| ! | CAGAAACCCGAGTTTTCAAA+TGG | + | chr8.3:53995210-53995229 | None:intergenic | 40.0% |
| ! | CCAAAGAGTACATTGAGAAC+TGG | - | chr8.3:53998538-53998557 | MS.gene59843:intron | 40.0% |
| ! | GCGGTTTTTGTCCAATTTGT+GGG | - | chr8.3:53995599-53995618 | MS.gene59843:CDS | 40.0% |
| ! | GGTTTGAAGTGTGTATAAGG+AGG | - | chr8.3:53996806-53996825 | MS.gene59843:intron | 40.0% |
| ! | TTAGTGACCGATTTACACTG+CGG | - | chr8.3:53994671-53994690 | MS.gene59843:CDS | 40.0% |
| !! | AAGCCCTTATTGATTTAGCG+TGG | - | chr8.3:53998457-53998476 | MS.gene59843:intron | 40.0% |
| !! | GTAAGCTGATTTTGTACGCA+AGG | - | chr8.3:53996063-53996082 | MS.gene59843:intron | 40.0% |
| !! | GTCCACTTAGATTTGGTTCT+TGG | - | chr8.3:53995572-53995591 | MS.gene59843:CDS | 40.0% |
| !! | TCCTCGATCTCTTTGAAATC+AGG | + | chr8.3:53998576-53998595 | None:intergenic | 40.0% |
| !!! | CAACTAGAGCAAGGGTATTT+TGG | + | chr8.3:53994983-53995002 | None:intergenic | 40.0% |
| !!! | CAGAGTGGATTAGGGATTTT+CGG | + | chr8.3:53996736-53996755 | None:intergenic | 40.0% |
| !!! | TCTCTCGCTTTTTTTTGTGC+TGG | - | chr8.3:53994630-53994649 | MS.gene59843:intron | 40.0% |
| AAAAGCCTGTCTTCCTGTTC+AGG | + | chr8.3:53998872-53998891 | None:intergenic | 45.0% | |
| AACACACCAAAATGGGTAGG+CGG | + | chr8.3:53995536-53995555 | None:intergenic | 45.0% | |
| ACTACTGAACCACCAGAGAT+AGG | + | chr8.3:53998084-53998103 | None:intergenic | 45.0% | |
| AGACCTCGCTCAAATTACAG+GGG | + | chr8.3:53994769-53994788 | None:intergenic | 45.0% | |
| ATCATTGGAGCACATGAGAG+AGG | + | chr8.3:53997838-53997857 | None:intergenic | 45.0% | |
| ATGTTCCTGAACAGGAAGAC+AGG | - | chr8.3:53998864-53998883 | MS.gene59843:intron | 45.0% | |
| ATTGGGGACAGCAATAACTC+TGG | - | chr8.3:53998908-53998927 | MS.gene59843:intron | 45.0% | |
| CAAATTACAGGGGCTACTTG+AGG | + | chr8.3:53994759-53994778 | None:intergenic | 45.0% | |
| CAACACCATTTAGATCACCG+AGG | + | chr8.3:53998236-53998255 | None:intergenic | 45.0% | |
| CACTGTGACGGCAACAATAA+TGG | - | chr8.3:53995178-53995197 | MS.gene59843:CDS | 45.0% | |
| CAGACCTCGCTCAAATTACA+GGG | + | chr8.3:53994770-53994789 | None:intergenic | 45.0% | |
| CATTCGACCGCAGTGTAAAT+CGG | + | chr8.3:53994681-53994700 | None:intergenic | 45.0% | |
| CGGGTTTCTGCTAATGATTG+TGG | - | chr8.3:53995220-53995239 | MS.gene59843:CDS | 45.0% | |
| CTCCAAATCATCTCTCTGCT+TGG | - | chr8.3:53997807-53997826 | MS.gene59843:intron | 45.0% | |
| CTCCCATCACCAGTATTTGT+TGG | - | chr8.3:53997650-53997669 | MS.gene59843:intron | 45.0% | |
| CTTCATGCACTTCTTGTGTG+TGG | - | chr8.3:53995722-53995741 | MS.gene59843:intron | 45.0% | |
| GAAAATCCTTGAAGGGCCTA+AGG | - | chr8.3:53998434-53998453 | MS.gene59843:intron | 45.0% | |
| GACACAACAATTGGACGTAC+AGG | + | chr8.3:53998486-53998505 | None:intergenic | 45.0% | |
| GACTGTGAGTTTCATTGACG+CGG | - | chr8.3:53995869-53995888 | MS.gene59843:intron | 45.0% | |
| GAGAACCTCGGTGATCTAAA+TGG | - | chr8.3:53998228-53998247 | MS.gene59843:intron | 45.0% | |
| GATGTTGAAGATCCGTTGCA+AGG | - | chr8.3:53994505-53994524 | MS.gene59843:CDS | 45.0% | |
| GCCCAAGAACCAAATCTAAG+TGG | + | chr8.3:53995577-53995596 | None:intergenic | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | + | chr8.3:53998938-53998957 | None:intergenic | 45.0% | |
| GGATGAAGACGAGCTAGTAA+AGG | + | chr8.3:53997781-53997800 | None:intergenic | 45.0% | |
| GGGATGTCTTGAGTGGTAAA+AGG | - | chr8.3:53997728-53997747 | MS.gene59843:intron | 45.0% | |
| GTCTTCCTGTTCAGGAACAT+CGG | + | chr8.3:53998864-53998883 | None:intergenic | 45.0% | |
| TCAGACCTCGCTCAAATTAC+AGG | + | chr8.3:53994771-53994790 | None:intergenic | 45.0% | |
| TCGAGTTTCCCACATAAACC+AGG | + | chr8.3:53998008-53998027 | None:intergenic | 45.0% | |
| TCGGAAGAAGTGGTAGCAAA+TGG | - | chr8.3:53998941-53998960 | MS.gene59843:intron | 45.0% | |
| TCTCCATCACCACTGAAACA+GGG | + | chr8.3:53998342-53998361 | None:intergenic | 45.0% | |
| TCTGTCTCTGACAAACCAAG+TGG | - | chr8.3:53997898-53997917 | MS.gene59843:intron | 45.0% | |
| TCTTCCTGTTCAGGAACATC+GGG | + | chr8.3:53998863-53998882 | None:intergenic | 45.0% | |
| TGACAAGTCGTTATCCCTGT+GGG | - | chr8.3:53997708-53997727 | MS.gene59843:intron | 45.0% | |
| TGACATTGTGACAGTCGAGA+AGG | - | chr8.3:53998772-53998791 | MS.gene59843:intron | 45.0% | |
| TGTATAAGGAGGGAGACTCT+AGG | - | chr8.3:53996817-53996836 | MS.gene59843:intron | 45.0% | |
| TGTTCAGGAACATCGGGAAT+GGG | + | chr8.3:53998857-53998876 | None:intergenic | 45.0% | |
| TTACTAGCTCGTCTTCATCC+GGG | - | chr8.3:53997781-53997800 | MS.gene59843:intron | 45.0% | |
| TTCCTGACCAACTAGAGCAA+GGG | + | chr8.3:53994991-53995010 | None:intergenic | 45.0% | |
| TTTCCTGACCAACTAGAGCA+AGG | + | chr8.3:53994992-53995011 | None:intergenic | 45.0% | |
| ! | AAATGAGGAGTATGTGGAGC+GGG | - | chr8.3:53998596-53998615 | MS.gene59843:intron | 45.0% |
| ! | AATCACGAAAGTGCACTGGA+AGG | - | chr8.3:53998314-53998333 | MS.gene59843:intron | 45.0% |
| ! | ATGCAATCACGAAAGTGCAC+TGG | - | chr8.3:53998310-53998329 | MS.gene59843:intron | 45.0% |
| ! | CAAGCAGAGAGATGATTTGG+AGG | + | chr8.3:53997809-53997828 | None:intergenic | 45.0% |
| ! | CAATGGCATTGCTATTGCAG+AGG | - | chr8.3:53995895-53995914 | MS.gene59843:intron | 45.0% |
| ! | CACACACAAGAAGTGCATGA+AGG | + | chr8.3:53995724-53995743 | None:intergenic | 45.0% |
| ! | CGAGGAAAATGAGGAGTATG+TGG | - | chr8.3:53998590-53998609 | MS.gene59843:intron | 45.0% |
| ! | GGTGTGTTTTTCCTGTGATG+TGG | - | chr8.3:53995548-53995567 | MS.gene59843:CDS | 45.0% |
| ! | GTCGATTGGTTGCCCTAATT+AGG | - | chr8.3:53996632-53996651 | MS.gene59843:intron | 45.0% |
| ! | GTTGTGTCTGTTTCTCTGTG+TGG | - | chr8.3:53998498-53998517 | MS.gene59843:intron | 45.0% |
| ! | TACAGCCGCTATTTGCTACA+AGG | + | chr8.3:53995314-53995333 | None:intergenic | 45.0% |
| ! | TCTAGGACTCCTTGATACTC+GGG | - | chr8.3:53996834-53996853 | MS.gene59843:intron | 45.0% |
| ! | TGGCTGTTTCCAATGACGAT+GGG | - | chr8.3:53995930-53995949 | MS.gene59843:intron | 45.0% |
| !! | AGATTTGGTTCTTGGGCTAG+CGG | - | chr8.3:53995580-53995599 | MS.gene59843:CDS | 45.0% |
| !! | CTCTAGGACTCCTTGATACT+CGG | - | chr8.3:53996833-53996852 | MS.gene59843:intron | 45.0% |
| !! | TGCAGAGGCATCATAATCTC+TGG | - | chr8.3:53995910-53995929 | MS.gene59843:intron | 45.0% |
| !! | TTTCAGTGGTGATGGAGAGT+GGG | - | chr8.3:53998344-53998363 | MS.gene59843:intron | 45.0% |
| !!! | CCTTTTGGGATGAGTTTGGT+CGG | - | chr8.3:53997214-53997233 | MS.gene59843:intron | 45.0% |
| !!! | GCACAGCATTTTTTGTGCAG+TGG | - | chr8.3:53996183-53996202 | MS.gene59843:intron | 45.0% |
| AAACCCTGTCTCACGCAACA+AGG | - | chr8.3:53997924-53997943 | MS.gene59843:intron | 50.0% | |
| AACCCTGTCTCACGCAACAA+GGG | - | chr8.3:53997925-53997944 | MS.gene59843:intron | 50.0% | |
| AACCCTTGTTGCGTGAGACA+GGG | + | chr8.3:53997930-53997949 | None:intergenic | 50.0% | |
| ACATCGGGAATGGGAGATAC+TGG | + | chr8.3:53998848-53998867 | None:intergenic | 50.0% | |
| ACATGCAGCAGTAGGTGTGA+AGG | + | chr8.3:53997968-53997987 | None:intergenic | 50.0% | |
| ACCACTCAAGACATCCCACA+GGG | + | chr8.3:53997725-53997744 | None:intergenic | 50.0% | |
| ACTCACAGTCTCGTAGCAGT+CGG | + | chr8.3:53995859-53995878 | None:intergenic | 50.0% | |
| ACTCCTTGATACTCGGGGTA+TGG | - | chr8.3:53996840-53996859 | MS.gene59843:intron | 50.0% | |
| AGTAAAGATGGTGAGGTGCG+TGG | - | chr8.3:53998051-53998070 | MS.gene59843:intron | 50.0% | |
| ATCCCATACCCCGAGTATCA+AGG | + | chr8.3:53996846-53996865 | None:intergenic | 50.0% | |
| CATGCCTCAAGTCCACTTGA+AGG | - | chr8.3:53998977-53998996 | MS.gene59843:intron | 50.0% | |
| CATTCCCGATGTTCCTGAAC+AGG | - | chr8.3:53998856-53998875 | MS.gene59843:intron | 50.0% | |
| CCGACCAAACTCATCCCAAA+AGG | + | chr8.3:53997217-53997236 | None:intergenic | 50.0% | |
| CGCCAAGCAGAGAGATGATT+TGG | + | chr8.3:53997812-53997831 | None:intergenic | 50.0% | |
| CTAAGTGGACACCACATCAC+AGG | + | chr8.3:53995562-53995581 | None:intergenic | 50.0% | |
| CTAGGACTCCTTGATACTCG+GGG | - | chr8.3:53996835-53996854 | MS.gene59843:intron | 50.0% | |
| CTCCTTGATACTCGGGGTAT+GGG | - | chr8.3:53996841-53996860 | MS.gene59843:intron | 50.0% | |
| CTCTCCATCACCACTGAAAC+AGG | + | chr8.3:53998343-53998362 | None:intergenic | 50.0% | |
| CTGACAAGTCGTTATCCCTG+TGG | - | chr8.3:53997707-53997726 | MS.gene59843:intron | 50.0% | |
| CTGTTCAGGAACATCGGGAA+TGG | + | chr8.3:53998858-53998877 | None:intergenic | 50.0% | |
| GAATCAGCTGGCTGCAATGA+TGG | - | chr8.3:53997559-53997578 | MS.gene59843:intron | 50.0% | |
| GCAGCCAAATAGCATAGCAG+AGG | - | chr8.3:53995352-53995371 | MS.gene59843:CDS | 50.0% | |
| GCTGAACTGAACGAGAACCT+CGG | - | chr8.3:53998216-53998235 | MS.gene59843:intron | 50.0% | |
| GGCGTGACATTACCTTCAAG+TGG | + | chr8.3:53998992-53999011 | None:intergenic | 50.0% | |
| TAATTGGACTCTGGGCAGAG+TGG | + | chr8.3:53996751-53996770 | None:intergenic | 50.0% | |
| TACCACTCAAGACATCCCAC+AGG | + | chr8.3:53997726-53997745 | None:intergenic | 50.0% | |
| TACCCTTGCTCTAGTTGGTC+AGG | - | chr8.3:53994986-53995005 | MS.gene59843:CDS | 50.0% | |
| TACTAGCTCGTCTTCATCCG+GGG | - | chr8.3:53997782-53997801 | MS.gene59843:intron | 50.0% | |
| TAGCCCCTGTAATTTGAGCG+AGG | - | chr8.3:53994763-53994782 | MS.gene59843:CDS | 50.0% | |
| TTCTGCCAAATAGAGCAGCC+TGG | - | chr8.3:53996021-53996040 | MS.gene59843:intron | 50.0% | |
| TTGTTGCGTGAGACAGGGTT+TGG | + | chr8.3:53997925-53997944 | None:intergenic | 50.0% | |
| TTTCATTGACGCGGCTGCAA+TGG | - | chr8.3:53995878-53995897 | MS.gene59843:intron | 50.0% | |
| ! | AGAGATGATTTGGAGGACCC+CGG | + | chr8.3:53997802-53997821 | None:intergenic | 50.0% |
| ! | CTGGCTGTTTCCAATGACGA+TGG | - | chr8.3:53995929-53995948 | MS.gene59843:intron | 50.0% |
| ! | CTTCAAGTGGACTTGAGGCA+TGG | + | chr8.3:53998979-53998998 | None:intergenic | 50.0% |
| ! | GCTGTTTCCAATGACGATGG+GGG | - | chr8.3:53995932-53995951 | MS.gene59843:intron | 50.0% |
| ! | GGCTGTTTCCAATGACGATG+GGG | - | chr8.3:53995931-53995950 | MS.gene59843:intron | 50.0% |
| ! | TCACGCAACAAGGGTTCTGA+TGG | - | chr8.3:53997934-53997953 | MS.gene59843:intron | 50.0% |
| ! | TGAGAACCGCCTACCCATTT+TGG | - | chr8.3:53995527-53995546 | MS.gene59843:CDS | 50.0% |
| !! | ACTCTGGGCAGAGTGGATTA+GGG | + | chr8.3:53996744-53996763 | None:intergenic | 50.0% |
| !! | GTTGGTGGTTCTGCTAGCAA+AGG | - | chr8.3:53998369-53998388 | MS.gene59843:intron | 50.0% |
| !! | GTTTCAGTGGTGATGGAGAG+TGG | - | chr8.3:53998343-53998362 | MS.gene59843:intron | 50.0% |
| !!! | TGGGATTGGCTGCTGTTTTG+TGG | - | chr8.3:53995657-53995676 | MS.gene59843:CDS | 50.0% |
| ACACAGACCCCCATCGTCAT+TGG | + | chr8.3:53995942-53995961 | None:intergenic | 55.0% | |
| CAATCGCAGTGGCGTTGCAA+TGG | - | chr8.3:53995131-53995150 | MS.gene59843:CDS | 55.0% | |
| CAGCGACTCTGATATGTCCG+AGG | - | chr8.3:53998805-53998824 | MS.gene59843:intron | 55.0% | |
| CGTGGCATGGTTCCTATCTC+TGG | - | chr8.3:53998069-53998088 | MS.gene59843:intron | 55.0% | |
| GAACCCTTGTTGCGTGAGAC+AGG | + | chr8.3:53997931-53997950 | None:intergenic | 55.0% | |
| GCACCCTGTTTCAGTGGTGA+TGG | - | chr8.3:53998336-53998355 | MS.gene59843:intron | 55.0% | |
| GGCATGGTTCCTATCTCTGG+TGG | - | chr8.3:53998072-53998091 | MS.gene59843:intron | 55.0% | |
| TCCCTGTGGGATGTCTTGAG+TGG | - | chr8.3:53997721-53997740 | MS.gene59843:intron | 55.0% | |
| TGATGCGTGTGCAATCGCAG+TGG | - | chr8.3:53995120-53995139 | MS.gene59843:CDS | 55.0% | |
| TGCAGCAGTAGGTGTGAAGG+AGG | + | chr8.3:53997965-53997984 | None:intergenic | 55.0% | |
| ! | GACTCTGGGCAGAGTGGATT+AGG | + | chr8.3:53996745-53996764 | None:intergenic | 55.0% |
| ! | GAGACAGGGTTTGGTCCACT+TGG | + | chr8.3:53997916-53997935 | None:intergenic | 55.0% |
| !! | GATGGAGAGTGGGTTGTTGG+TGG | - | chr8.3:53998354-53998373 | MS.gene59843:intron | 55.0% |
| !! | GGTGATGGAGAGTGGGTTGT+TGG | - | chr8.3:53998351-53998370 | MS.gene59843:intron | 55.0% |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | - | chr8.3:53998330-53998349 | MS.gene59843:intron | 55.0% |
| AGATGGTGAGGTGCGTGGCA+TGG | - | chr8.3:53998056-53998075 | MS.gene59843:intron | 60.0% | |
| CGTCGTGGTACCCTTCTTGC+TGG | - | chr8.3:53994592-53994611 | MS.gene59843:intron | 60.0% | |
| CTGCGGTCGAATGATGCAGC+CGG | - | chr8.3:53994688-53994707 | MS.gene59843:CDS | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | + | chr8.3:53998443-53998462 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 53994257 | 53999030 | 53994257 | ID=MS.gene59843 |
| chr8.3 | mRNA | 53994257 | 53999030 | 53994257 | ID=MS.gene59843.t1;Parent=MS.gene59843 |
| chr8.3 | exon | 53999012 | 53999030 | 53999012 | ID=MS.gene59843.t1.exon1;Parent=MS.gene59843.t1 |
| chr8.3 | CDS | 53999012 | 53999030 | 53999012 | ID=cds.MS.gene59843.t1;Parent=MS.gene59843.t1 |
| chr8.3 | exon | 53998674 | 53998772 | 53998674 | ID=MS.gene59843.t1.exon2;Parent=MS.gene59843.t1 |
| chr8.3 | CDS | 53998674 | 53998772 | 53998674 | ID=cds.MS.gene59843.t1;Parent=MS.gene59843.t1 |
| chr8.3 | exon | 53994634 | 53995721 | 53994634 | ID=MS.gene59843.t1.exon3;Parent=MS.gene59843.t1 |
| chr8.3 | CDS | 53994634 | 53995721 | 53994634 | ID=cds.MS.gene59843.t1;Parent=MS.gene59843.t1 |
| chr8.3 | exon | 53994257 | 53994550 | 53994257 | ID=MS.gene59843.t1.exon4;Parent=MS.gene59843.t1 |
| chr8.3 | CDS | 53994257 | 53994550 | 53994257 | ID=cds.MS.gene59843.t1;Parent=MS.gene59843.t1 |
| Gene Sequence |
| Protein sequence |
