Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59845.t1 | XP_003628198.2 | 92.4 | 462 | 33 | 1 | 5 | 464 | 38 | 499 | 2.50E-244 | 854.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59845.t1 | Q5E915 | 67.2 | 448 | 142 | 3 | 5 | 452 | 38 | 480 | 1.2e-170 | 600.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59845.t1 | G7L7T3 | 92.4 | 462 | 33 | 1 | 5 | 464 | 38 | 499 | 1.8e-244 | 854.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21793 | MS.gene59845 | PPI |
| MS.gene056221 | MS.gene59845 | PPI |
| MS.gene058069 | MS.gene59845 | PPI |
| MS.gene75146 | MS.gene59845 | PPI |
| MS.gene037409 | MS.gene59845 | PPI |
| MS.gene024821 | MS.gene59845 | PPI |
| MS.gene40494 | MS.gene59845 | PPI |
| MS.gene016615 | MS.gene59845 | PPI |
| MS.gene88509 | MS.gene59845 | PPI |
| MS.gene90863 | MS.gene59845 | PPI |
| MS.gene60096 | MS.gene59845 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59845.t1 | MTR_8g045463 | 92.424 | 462 | 33 | 1 | 5 | 464 | 38 | 499 | 0.0 | 840 |
| MS.gene59845.t1 | MTR_8g045470 | 92.424 | 462 | 33 | 1 | 5 | 464 | 38 | 499 | 0.0 | 840 |
| MS.gene59845.t1 | MTR_8g045440 | 92.174 | 460 | 36 | 0 | 5 | 464 | 38 | 497 | 0.0 | 837 |
| MS.gene59845.t1 | MTR_8g041740 | 89.565 | 460 | 48 | 0 | 5 | 464 | 38 | 497 | 0.0 | 818 |
| MS.gene59845.t1 | MTR_8g045440 | 93.716 | 366 | 23 | 0 | 5 | 370 | 38 | 403 | 0.0 | 672 |
| MS.gene59845.t1 | MTR_5g069620 | 71.264 | 87 | 25 | 0 | 4 | 90 | 7 | 93 | 2.71e-35 | 127 |
| MS.gene59845.t1 | MTR_7g086360 | 23.867 | 331 | 188 | 12 | 5 | 329 | 70 | 342 | 3.74e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59845.t1 | AT3G21060 | 67.333 | 450 | 142 | 3 | 5 | 454 | 38 | 482 | 0.0 | 587 |
Find 125 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATATCCTTGCAGGTAAA+AGG | 0.197161 | 8.3:-53985244 | MS.gene59845:intron |
| TGAGTGGCATAGTTTATATC+TGG | 0.203041 | 8.3:-53985452 | MS.gene59845:CDS |
| ATGATGGAAGCTGTGTTATT+TGG | 0.213605 | 8.3:-53986391 | MS.gene59845:CDS |
| GCTACCACTTCTTCCGAAAA+TGG | 0.216044 | 8.3:+53985031 | None:intergenic |
| CTCTCCATCACCACTGAAAC+AGG | 0.282312 | 8.3:+53985626 | None:intergenic |
| TAAGGAAGCCCTTATTGATT+TGG | 0.332476 | 8.3:-53985514 | MS.gene59845:CDS |
| CCAGTTCTCAATATACTCTT+TGG | 0.339039 | 8.3:+53985428 | None:intergenic |
| GCTGCATGTTTCAGTAAGTA+TGG | 0.351160 | 8.3:-53985987 | MS.gene59845:CDS |
| ACAATGAACAACTCCATTAT+CGG | 0.356305 | 8.3:-53988256 | MS.gene59845:intron |
| TCCTCAATCTCTATGAAATC+AGG | 0.356314 | 8.3:+53985393 | None:intergenic |
| GGTGATGGAGAGTGGGTTGT+TGG | 0.362512 | 8.3:-53985615 | MS.gene59845:CDS |
| AAGAACCTCGGTGATCTAAA+TGG | 0.368839 | 8.3:-53985738 | MS.gene59845:CDS |
| GATGCCATGCCAAATCAATA+AGG | 0.373267 | 8.3:+53985505 | None:intergenic |
| TTTACTAGCTCGTCTTCATC+CGG | 0.374685 | 8.3:-53986186 | MS.gene59845:CDS |
| GAACCCTTGTTGCGTGAGGC+AGG | 0.376223 | 8.3:+53986038 | None:intergenic |
| TGATGGAAGCTGTGTTATTT+GGG | 0.380302 | 8.3:-53986390 | MS.gene59845:CDS |
| ACCCTTTGACCAACAAATAC+TGG | 0.382685 | 8.3:+53986307 | None:intergenic |
| AGTGCTCTAACTTCATCTTT+TGG | 0.386517 | 8.3:+53985774 | None:intergenic |
| CTCCCATTACCAGTATTTGT+TGG | 0.394408 | 8.3:-53986316 | MS.gene59845:CDS |
| AAAGAAACAGACAGAACAAT+TGG | 0.396217 | 8.3:+53985474 | None:intergenic |
| TTAGATAGTTCTTCAAAGAT+TGG | 0.397773 | 8.3:-53985076 | MS.gene59845:CDS |
| GGCGTGACATTACCTTCAAC+TGG | 0.399826 | 8.3:+53984977 | None:intergenic |
| AACAACCTGTCATCCTGTTC+AGG | 0.401836 | 8.3:+53985097 | None:intergenic |
| ACCAGTATTTGTTGGTCAAA+GGG | 0.407944 | 8.3:-53986308 | MS.gene59845:CDS |
| CTTGTAATTGACATTAAAGA+TGG | 0.408889 | 8.3:-53985927 | MS.gene59845:CDS |
| CGTGCCATGGTTCCTATCTC+TGG | 0.411940 | 8.3:-53985897 | MS.gene59845:CDS |
| CATTCCCGATGTTCCTGAAC+AGG | 0.412421 | 8.3:-53985110 | MS.gene59845:CDS |
| CACCAAGCAGAAAGATGGTT+TGG | 0.414247 | 8.3:+53986157 | None:intergenic |
| CTCCAAACCATCTTTCTGCT+TGG | 0.422817 | 8.3:-53986159 | MS.gene59845:CDS |
| GACCAACAAATACTGGTAAT+GGG | 0.423412 | 8.3:+53986314 | None:intergenic |
| TGACCAACAAATACTGGTAA+TGG | 0.426028 | 8.3:+53986313 | None:intergenic |
| GGGCTTCCTTAGGCCCTTCA+AGG | 0.426153 | 8.3:+53985526 | None:intergenic |
| TTGTTGCGTGAGGCAGGGTT+AGG | 0.435641 | 8.3:+53986044 | None:intergenic |
| TCCTGATTTCATAGAGATTG+AGG | 0.436594 | 8.3:-53985394 | MS.gene59845:CDS |
| ACATCGGGAATGGGAGATAC+TGG | 0.437003 | 8.3:+53985121 | None:intergenic |
| ACTACTGAACCACCAGAGAT+AGG | 0.439225 | 8.3:+53985885 | None:intergenic |
| TGAGGAAAATGAGGAGTATG+TGG | 0.443627 | 8.3:-53985376 | MS.gene59845:CDS |
| TTACTAGCTCGTCTTCATCC+GGG | 0.444533 | 8.3:-53986185 | MS.gene59845:CDS |
| TCACGCAACAAGGGTTCTGC+TGG | 0.445794 | 8.3:-53986032 | MS.gene59845:CDS |
| GGGATGTCTTGAGTGGTAAA+AGG | 0.450323 | 8.3:-53986238 | MS.gene59845:CDS |
| ACTCAAATGATCGAGTAATC+AGG | 0.452188 | 8.3:-53985818 | MS.gene59845:CDS |
| CATAGAGATTGAGGAAAATG+AGG | 0.453993 | 8.3:-53985385 | MS.gene59845:CDS |
| GATGAAGACGAGCTAGTAAA+GGG | 0.459913 | 8.3:+53986189 | None:intergenic |
| CCAAAGAGTATATTGAGAAC+TGG | 0.462193 | 8.3:-53985428 | MS.gene59845:CDS |
| TACCAGTATTTGTTGGTCAA+AGG | 0.467812 | 8.3:-53986309 | MS.gene59845:CDS |
| GATGGAGAGTGGGTTGTTGG+TGG | 0.468537 | 8.3:-53985612 | MS.gene59845:CDS |
| GTTCTGTCTGTTTCTTTGAG+TGG | 0.470498 | 8.3:-53985468 | MS.gene59845:CDS |
| CTGTTCAGGAACATCGGGAA+TGG | 0.471322 | 8.3:+53985111 | None:intergenic |
| TTATTTGGGATTTAGAAGTC+AGG | 0.472102 | 8.3:-53986376 | MS.gene59845:CDS |
| TCACATACATTATCAGTGTC+AGG | 0.473182 | 8.3:+53985327 | None:intergenic |
| GAGAGCACAAGATTTACATA+TGG | 0.478073 | 8.3:-53985575 | MS.gene59845:CDS |
| TCGGAAGAAGTGGTAGCAAA+TGG | 0.478453 | 8.3:-53985025 | MS.gene59845:CDS |
| GAATCAGCTGGCTGCAATGA+TGG | 0.479058 | 8.3:-53986407 | MS.gene59845:intron |
| CATCTTGTGAAAATCCTTGA+AGG | 0.482006 | 8.3:-53985540 | MS.gene59845:CDS |
| GTATGGAAACCTGGTTTATG+TGG | 0.490370 | 8.3:-53985970 | MS.gene59845:CDS |
| GAGTGGCATAGTTTATATCT+GGG | 0.492751 | 8.3:-53985451 | MS.gene59845:CDS |
| TCATATCCTTGCAGGTAAAA+GGG | 0.494099 | 8.3:-53985243 | MS.gene59845:intron |
| TCATCCTGTTCAGGAACATC+GGG | 0.498010 | 8.3:+53985106 | None:intergenic |
| ATTTACATATGGGATAGAAC+TGG | 0.499480 | 8.3:-53985564 | MS.gene59845:CDS |
| TGTTCAGGAACATCGGGAAT+GGG | 0.501740 | 8.3:+53985112 | None:intergenic |
| GACAGAACAATTGGACGTAC+AGG | 0.503056 | 8.3:+53985483 | None:intergenic |
| GTCAACAATCATCGGAGTAC+AGG | 0.505887 | 8.3:+53986124 | None:intergenic |
| ATGCCATGCCAAATCAATAA+GGG | 0.506231 | 8.3:+53985506 | None:intergenic |
| GGATGAAGACGAGCTAGTAA+AGG | 0.525546 | 8.3:+53986188 | None:intergenic |
| AAATCAATAAGGGCTTCCTT+AGG | 0.525647 | 8.3:+53985516 | None:intergenic |
| ATATCAGAGTCGCAGAAAGC+AGG | 0.527495 | 8.3:+53985169 | None:intergenic |
| GCACCCTGTTTCAGTGGTGA+TGG | 0.531362 | 8.3:-53985630 | MS.gene59845:CDS |
| GTTTCAGTGGTGATGGAGAG+TGG | 0.534496 | 8.3:-53985623 | MS.gene59845:CDS |
| TTTCAGTAAGTATGGAAACC+TGG | 0.536688 | 8.3:-53985979 | MS.gene59845:CDS |
| CATGCCTCAAGTCCAGTTGA+AGG | 0.538226 | 8.3:-53984989 | MS.gene59845:CDS |
| GTCATCCTGTTCAGGAACAT+CGG | 0.540330 | 8.3:+53985105 | None:intergenic |
| ATGCAATCACGAAAGTGCAC+TGG | 0.552939 | 8.3:-53985656 | MS.gene59845:CDS |
| AGAGCACAAGATTTACATAT+GGG | 0.555323 | 8.3:-53985574 | MS.gene59845:CDS |
| GAAAATCCTTGAAGGGCCTA+AGG | 0.556664 | 8.3:-53985532 | MS.gene59845:CDS |
| ATGTTCCTGAACAGGATGAC+AGG | 0.559029 | 8.3:-53985102 | MS.gene59845:CDS |
| TAACCCTGCCTCACGCAACA+AGG | 0.560146 | 8.3:-53986042 | MS.gene59845:CDS |
| ATTACCTTCAACTGGACTTG+AGG | 0.561076 | 8.3:+53984985 | None:intergenic |
| AAGCCCTTATTGATTTGGCA+TGG | 0.561694 | 8.3:-53985509 | MS.gene59845:CDS |
| ATTGGTGACAGCAATAACTC+TGG | 0.566084 | 8.3:-53985058 | MS.gene59845:CDS |
| TACTAGCTCGTCTTCATCCG+GGG | 0.567258 | 8.3:-53986184 | MS.gene59845:CDS |
| GTGTTTAAGTCAACAATCAT+CGG | 0.569428 | 8.3:+53986116 | None:intergenic |
| AACCCTTGTTGCGTGAGGCA+GGG | 0.570091 | 8.3:+53986039 | None:intergenic |
| AGCAGAACCCTTGTTGCGTG+AGG | 0.573099 | 8.3:+53986034 | None:intergenic |
| GGACACACCAAGCAGAAAGA+TGG | 0.574387 | 8.3:+53986152 | None:intergenic |
| AGATGGCGAGGTGCGTGCCA+TGG | 0.575964 | 8.3:-53985910 | MS.gene59845:CDS |
| TTTCAGTGGTGATGGAGAGT+GGG | 0.579791 | 8.3:-53985622 | MS.gene59845:CDS |
| TGGAAGGCACCCTGTTTCAG+TGG | 0.579970 | 8.3:-53985636 | MS.gene59845:CDS |
| AACATTGTATTCAGCATGAA+CGG | 0.580560 | 8.3:-53985858 | MS.gene59845:CDS |
| CAAGCAGAAAGATGGTTTGG+AGG | 0.587501 | 8.3:+53986160 | None:intergenic |
| TCGAGTTTCCCACATAAACC+AGG | 0.588345 | 8.3:+53985961 | None:intergenic |
| GAGGCAGGGTTAGGTCCACT+TGG | 0.588654 | 8.3:+53986053 | None:intergenic |
| TATTTGGGATTTAGAAGTCA+GGG | 0.588669 | 8.3:-53986375 | MS.gene59845:CDS |
| AAATGGTGTTGAGAAGTTGA+AGG | 0.591187 | 8.3:-53985721 | MS.gene59845:CDS |
| GTTGGTGGTTCTGCTAGCAA+AGG | 0.593351 | 8.3:-53985597 | MS.gene59845:CDS |
| TAGATAACATAGCTCTTCCT+CGG | 0.597086 | 8.3:+53985144 | None:intergenic |
| ATCTTGTGAAAATCCTTGAA+GGG | 0.602213 | 8.3:-53985539 | MS.gene59845:CDS |
| AACCCTGCCTCACGCAACAA+GGG | 0.603497 | 8.3:-53986041 | MS.gene59845:CDS |
| ACATGCAGCAGTAGGTGTGA+AGG | 0.605285 | 8.3:+53986001 | None:intergenic |
| TATGGAAACCTGGTTTATGT+GGG | 0.609917 | 8.3:-53985969 | MS.gene59845:CDS |
| GTCTGATGTCAATGAAGATG+AGG | 0.610127 | 8.3:-53985221 | MS.gene59845:CDS |
| GCCATGGTTCCTATCTCTGG+TGG | 0.613251 | 8.3:-53985894 | MS.gene59845:CDS |
| TACCACTCAAGACATCCCAC+AGG | 0.615382 | 8.3:+53986243 | None:intergenic |
| TGACATTATAACAGTCGAGA+AGG | 0.617183 | 8.3:-53985194 | MS.gene59845:CDS |
| GTTTATGTGGGAAACTCGAA+AGG | 0.626649 | 8.3:-53985957 | MS.gene59845:CDS |
| AGACAAGTCATTATCCCTGT+GGG | 0.631106 | 8.3:-53986258 | MS.gene59845:CDS |
| TGATTGCATCTTGAAACTCA+CGG | 0.633891 | 8.3:+53985670 | None:intergenic |
| AGTATTTGTTGGTCAAAGGG+TGG | 0.636013 | 8.3:-53986305 | MS.gene59845:CDS |
| ATTTGGGATTTAGAAGTCAG+GGG | 0.637096 | 8.3:-53986374 | MS.gene59845:CDS |
| TCTCCATCACCACTGAAACA+GGG | 0.640101 | 8.3:+53985627 | None:intergenic |
| TTACTGAAACATGCAGCAGT+AGG | 0.640206 | 8.3:+53985993 | None:intergenic |
| AATTGACATTAAAGATGGCG+AGG | 0.645296 | 8.3:-53985922 | MS.gene59845:CDS |
| TCTGTCTCTGACAAACCAAG+TGG | 0.648181 | 8.3:-53986068 | MS.gene59845:CDS |
| AAAGATGGTTTGGAGGACCC+CGG | 0.656183 | 8.3:+53986167 | None:intergenic |
| CTGCGACTCTGATATGTCCG+AGG | 0.656990 | 8.3:-53985161 | MS.gene59845:CDS |
| TGCAGCAGTAGGTGTGAAGG+AGG | 0.657772 | 8.3:+53986004 | None:intergenic |
| CAGACAAGTCATTATCCCTG+TGG | 0.668536 | 8.3:-53986259 | MS.gene59845:CDS |
| ACCACTCAAGACATCCCACA+GGG | 0.671936 | 8.3:+53986244 | None:intergenic |
| ACCACCAGAGATAGGAACCA+TGG | 0.676109 | 8.3:+53985893 | None:intergenic |
| GTTGAGAAGTTGAAGGCTGT+AGG | 0.680893 | 8.3:-53985714 | MS.gene59845:CDS |
| AATCACGAAAGTGCACTGGA+AGG | 0.694138 | 8.3:-53985652 | MS.gene59845:CDS |
| TCCCTGTGGGATGTCTTGAG+TGG | 0.699580 | 8.3:-53986245 | MS.gene59845:CDS |
| ATGAAGACGAGCTAGTAAAG+GGG | 0.710400 | 8.3:+53986190 | None:intergenic |
| GTTGAACTGAACAAGAACCT+CGG | 0.715288 | 8.3:-53985750 | MS.gene59845:CDS |
| ATCATCGGAGTACAGGACAG+AGG | 0.728617 | 8.3:+53986131 | None:intergenic |
| CAACACCATTTAGATCACCG+AGG | 0.738329 | 8.3:+53985733 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATGAATAAAATGAAA+AGG | + | chr8.3:53985018-53985037 | None:intergenic | 10.0% |
| !! | TTATATGAATAAAATGAAAA+GGG | + | chr8.3:53985017-53985036 | None:intergenic | 10.0% |
| !! | TATAAAGTAAATAAGCTTTA+GGG | + | chr8.3:53985531-53985550 | None:intergenic | 15.0% |
| !! | TTATAAAGTAAATAAGCTTT+AGG | + | chr8.3:53985532-53985551 | None:intergenic | 15.0% |
| !!! | TAATTTTCTCAAATTATTAG+CGG | + | chr8.3:53985675-53985694 | None:intergenic | 15.0% |
| !! | AATTTGAGAAAATTATGTGT+CGG | - | chr8.3:53985680-53985699 | MS.gene59845:CDS | 20.0% |
| !! | TAAATCTATACCATCATTAA+TGG | + | chr8.3:53986304-53986323 | None:intergenic | 20.0% |
| !! | TCATTAAAAGATTAGAAGAA+TGG | + | chr8.3:53986352-53986371 | None:intergenic | 20.0% |
| !!! | ACTTTATTTATTTTCCTTGT+GGG | - | chr8.3:53986567-53986586 | MS.gene59845:intron | 20.0% |
| !!! | ATTCTTCTAATCTTTTAATG+AGG | - | chr8.3:53986351-53986370 | MS.gene59845:CDS | 20.0% |
| !!! | TACTTTATTTATTTTCCTTG+TGG | - | chr8.3:53986566-53986585 | MS.gene59845:intron | 20.0% |
| !!! | TTCTAAGTTCTGATTAATTA+TGG | - | chr8.3:53985175-53985194 | MS.gene59845:CDS | 20.0% |
| !!! | TTCTTCTAATCTTTTAATGA+GGG | - | chr8.3:53986352-53986371 | MS.gene59845:CDS | 20.0% |
| !!! | TTCTTTTCTTTTCCATTTTA+TGG | - | chr8.3:53987933-53987952 | MS.gene59845:intron | 20.0% |
| !!! | TTTTATGAATTATTCACTCA+AGG | - | chr8.3:53986732-53986751 | MS.gene59845:intron | 20.0% |
| ! | AAGCATAAGTGTAAATGTTA+AGG | + | chr8.3:53986409-53986428 | None:intergenic | 25.0% |
| ! | AATTATAGCCATAACTACAA+GGG | + | chr8.3:53985939-53985958 | None:intergenic | 25.0% |
| ! | AATTGATAAATTGAATCAGC+TGG | - | chr8.3:53986792-53986811 | MS.gene59845:intron | 25.0% |
| ! | ATTGTATATGTAAGATCGAT+TGG | - | chr8.3:53985861-53985880 | MS.gene59845:CDS | 25.0% |
| ! | CAATTCATTTGTAATGCAAT+GGG | - | chr8.3:53986134-53986153 | MS.gene59845:CDS | 25.0% |
| ! | CTTGTAATTGACATTAAAGA+TGG | - | chr8.3:53987284-53987303 | MS.gene59845:intron | 25.0% |
| ! | GGTAATTAATTGAAGAGATT+TGG | - | chr8.3:53986235-53986254 | MS.gene59845:CDS | 25.0% |
| ! | TCTATATCACATTGATACTA+GGG | - | chr8.3:53986057-53986076 | MS.gene59845:CDS | 25.0% |
| ! | TTAGATAGTTCTTCAAAGAT+TGG | - | chr8.3:53988135-53988154 | MS.gene59845:intron | 25.0% |
| !! | CCTAACATTTTTCCTAATTA+GGG | + | chr8.3:53985890-53985909 | None:intergenic | 25.0% |
| !! | GTATACTCAGAAAGTTTTTA+TGG | + | chr8.3:53986549-53986568 | None:intergenic | 25.0% |
| !! | TCCTAACATTTTTCCTAATT+AGG | + | chr8.3:53985891-53985910 | None:intergenic | 25.0% |
| !!! | AAAGATATTGATTCTGTCAA+TGG | - | chr8.3:53986214-53986233 | MS.gene59845:CDS | 25.0% |
| !!! | TAGTTTTCTGTATTGATATC+CGG | - | chr8.3:53986034-53986053 | MS.gene59845:CDS | 25.0% |
| !!! | TTCATTAAACTTTGAAGTAG+TGG | - | chr8.3:53985801-53985820 | MS.gene59845:CDS | 25.0% |
| AAAGAAACAGACAGAACAAT+TGG | + | chr8.3:53987740-53987759 | None:intergenic | 30.0% | |
| AACATTGTATTCAGCATGAA+CGG | - | chr8.3:53987353-53987372 | MS.gene59845:intron | 30.0% | |
| ACACAAAAATTTACCACTTC+TGG | + | chr8.3:53985236-53985255 | None:intergenic | 30.0% | |
| ACGTGACATGAATAAACATT+AGG | + | chr8.3:53985124-53985143 | None:intergenic | 30.0% | |
| AGAAGATTATGAAGGTAATG+AGG | + | chr8.3:53985055-53985074 | None:intergenic | 30.0% | |
| AGAGCACAAGATTTACATAT+GGG | - | chr8.3:53987637-53987656 | MS.gene59845:intron | 30.0% | |
| AGTATCAATGTGATATAGAC+CGG | + | chr8.3:53986056-53986075 | None:intergenic | 30.0% | |
| AGTGAAAAACAAACCGATAA+TGG | + | chr8.3:53984971-53984990 | None:intergenic | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | - | chr8.3:53987672-53987691 | MS.gene59845:intron | 30.0% | |
| ATTTACATATGGGATAGAAC+TGG | - | chr8.3:53987647-53987666 | MS.gene59845:intron | 30.0% | |
| CAATTATAGCCATAACTACA+AGG | + | chr8.3:53985940-53985959 | None:intergenic | 30.0% | |
| CCAATTCATTTGTAATGCAA+TGG | - | chr8.3:53986133-53986152 | MS.gene59845:CDS | 30.0% | |
| CCATTGCATTACAAATGAAT+TGG | + | chr8.3:53986136-53986155 | None:intergenic | 30.0% | |
| CCCTAATTAGGAAAAATGTT+AGG | - | chr8.3:53985887-53985906 | MS.gene59845:CDS | 30.0% | |
| CGTGACATGAATAAACATTA+GGG | + | chr8.3:53985123-53985142 | None:intergenic | 30.0% | |
| CTGTGTTTATTTGAACTTCT+TGG | - | chr8.3:53985494-53985513 | MS.gene59845:CDS | 30.0% | |
| GCTATAATTGATGCTGAATT+AGG | - | chr8.3:53985950-53985969 | MS.gene59845:CDS | 30.0% | |
| GTCTATATCACATTGATACT+AGG | - | chr8.3:53986056-53986075 | MS.gene59845:CDS | 30.0% | |
| GTGTTTAAGTCAACAATCAT+CGG | + | chr8.3:53987098-53987117 | None:intergenic | 30.0% | |
| TAATGTATGTGAACGTTGTA+TGG | - | chr8.3:53987895-53987914 | MS.gene59845:intron | 30.0% | |
| TATAGTTGTATAGTGTGTAG+CGG | + | chr8.3:53985832-53985851 | None:intergenic | 30.0% | |
| TATTCGTCTTCTATGCTATT+TGG | + | chr8.3:53985403-53985422 | None:intergenic | 30.0% | |
| TGAAAAGGGAATGAAGAAAT+TGG | + | chr8.3:53985003-53985022 | None:intergenic | 30.0% | |
| TGTGTTGCATGTAATCTATT+TGG | - | chr8.3:53986492-53986511 | MS.gene59845:intron | 30.0% | |
| TGTTTATTTGAACTTCTTGG+TGG | - | chr8.3:53985497-53985516 | MS.gene59845:CDS | 30.0% | |
| TTAGTGAGTGTATATCTTTC+TGG | - | chr8.3:53986611-53986630 | MS.gene59845:intron | 30.0% | |
| TTCTGTGATACCATTAATGA+TGG | - | chr8.3:53986291-53986310 | MS.gene59845:CDS | 30.0% | |
| ! | TATTTGGGATTTAGAAGTCA+GGG | - | chr8.3:53986836-53986855 | MS.gene59845:intron | 30.0% |
| ! | TTAGGTTTGAAGTGTGTATA+AGG | - | chr8.3:53985968-53985987 | MS.gene59845:CDS | 30.0% |
| ! | TTATTTGGGATTTAGAAGTC+AGG | - | chr8.3:53986835-53986854 | MS.gene59845:intron | 30.0% |
| ! | TTGCTATTGATACGATAGTA+TGG | - | chr8.3:53986184-53986203 | MS.gene59845:CDS | 30.0% |
| !! | AAATAAGCTGATTTGTACCT+AGG | - | chr8.3:53985260-53985279 | MS.gene59845:intron | 30.0% |
| !! | AATAAGCTGATTTGTACCTA+GGG | - | chr8.3:53985261-53985280 | MS.gene59845:intron | 30.0% |
| AAATCAATAAGGGCTTCCTT+AGG | + | chr8.3:53987698-53987717 | None:intergenic | 35.0% | |
| AATGAATTGGACCAGAAAAC+AGG | + | chr8.3:53986123-53986142 | None:intergenic | 35.0% | |
| AATTGACATTAAAGATGGCG+AGG | - | chr8.3:53987289-53987308 | MS.gene59845:intron | 35.0% | |
| ACTCAAATGATCGAGTAATC+AGG | - | chr8.3:53987393-53987412 | MS.gene59845:intron | 35.0% | |
| ACTTGGTTGAGACCATAAAA+TGG | + | chr8.3:53987948-53987967 | None:intergenic | 35.0% | |
| AGTAACATGAGTGAGAAAGT+TGG | + | chr8.3:53986770-53986789 | None:intergenic | 35.0% | |
| ATGCCATGCCAAATCAATAA+GGG | + | chr8.3:53987708-53987727 | None:intergenic | 35.0% | |
| CATAGAGATTGAGGAAAATG+AGG | - | chr8.3:53987826-53987845 | MS.gene59845:intron | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | - | chr8.3:53987671-53987690 | MS.gene59845:intron | 35.0% | |
| CCAGTTCTCAATATACTCTT+TGG | + | chr8.3:53987786-53987805 | None:intergenic | 35.0% | |
| GACCAACAAATACTGGTAAT+GGG | + | chr8.3:53986900-53986919 | None:intergenic | 35.0% | |
| GAGTGGCATAGTTTATATCT+GGG | - | chr8.3:53987760-53987779 | MS.gene59845:intron | 35.0% | |
| GATTAACACCCTTGTAGTTA+TGG | - | chr8.3:53985928-53985947 | MS.gene59845:CDS | 35.0% | |
| GGTTTATGCAGTTCACAAAT+AGG | + | chr8.3:53986443-53986462 | None:intergenic | 35.0% | |
| GTAAATAACAGCTGCTATAG+TGG | - | chr8.3:53985351-53985370 | MS.gene59845:CDS | 35.0% | |
| TAAATCTGCATCTGAATGTG+TGG | - | chr8.3:53986680-53986699 | MS.gene59845:intron | 35.0% | |
| TACCATATGTGTATGAAGCA+CGG | - | chr8.3:53985615-53985634 | MS.gene59845:CDS | 35.0% | |
| TAGATAACATAGCTCTTCCT+CGG | + | chr8.3:53988070-53988089 | None:intergenic | 35.0% | |
| TATGGAAACCTGGTTTATGT+GGG | - | chr8.3:53987242-53987261 | MS.gene59845:intron | 35.0% | |
| TCAAATAAACACAGCGTGAA+TGG | + | chr8.3:53985488-53985507 | None:intergenic | 35.0% | |
| TCACATACATTATCAGTGTC+AGG | + | chr8.3:53987887-53987906 | None:intergenic | 35.0% | |
| TCATATCCTTGCAGGTAAAA+GGG | - | chr8.3:53987968-53987987 | MS.gene59845:intron | 35.0% | |
| TCCTCAATCTCTATGAAATC+AGG | + | chr8.3:53987821-53987840 | None:intergenic | 35.0% | |
| TCCTGATTTCATAGAGATTG+AGG | - | chr8.3:53987817-53987836 | MS.gene59845:intron | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | + | chr8.3:53985669-53985688 | None:intergenic | 35.0% | |
| TGACATTATAACAGTCGAGA+AGG | - | chr8.3:53988017-53988036 | MS.gene59845:intron | 35.0% | |
| TGACCAACAAATACTGGTAA+TGG | + | chr8.3:53986901-53986920 | None:intergenic | 35.0% | |
| TGACGTGTAGAAGATTATGA+AGG | + | chr8.3:53985063-53985082 | None:intergenic | 35.0% | |
| TGAGTGGCATAGTTTATATC+TGG | - | chr8.3:53987759-53987778 | MS.gene59845:intron | 35.0% | |
| TGATTGCATCTTGAAACTCA+CGG | + | chr8.3:53987544-53987563 | None:intergenic | 35.0% | |
| TTCATATCCTTGCAGGTAAA+AGG | - | chr8.3:53987967-53987986 | MS.gene59845:intron | 35.0% | |
| TTGACACAAAGTATGAAGCA+CGG | + | chr8.3:53985757-53985776 | None:intergenic | 35.0% | |
| TTTCAGTAAGTATGGAAACC+TGG | - | chr8.3:53987232-53987251 | MS.gene59845:intron | 35.0% | |
| ! | AAATGGTGTTGAGAAGTTGA+AGG | - | chr8.3:53987490-53987509 | MS.gene59845:intron | 35.0% |
| ! | ACCAGTATTTGTTGGTCAAA+GGG | - | chr8.3:53986903-53986922 | MS.gene59845:intron | 35.0% |
| ! | AGAAAATTATGTGTCGGTGT+CGG | - | chr8.3:53985686-53985705 | MS.gene59845:CDS | 35.0% |
| ! | AGCTGTTATTTACTAGACAC+AGG | + | chr8.3:53985344-53985363 | None:intergenic | 35.0% |
| ! | AGTGCTCTAACTTCATCTTT+TGG | + | chr8.3:53987440-53987459 | None:intergenic | 35.0% |
| ! | ATGATGGAAGCTGTGTTATT+TGG | - | chr8.3:53986820-53986839 | MS.gene59845:intron | 35.0% |
| ! | ATTAACTTGAGGGCAGATTT+GGG | + | chr8.3:53985464-53985483 | None:intergenic | 35.0% |
| ! | ATTTGGGATTTAGAAGTCAG+GGG | - | chr8.3:53986837-53986856 | MS.gene59845:intron | 35.0% |
| ! | CCAAAGAGTATATTGAGAAC+TGG | - | chr8.3:53987783-53987802 | MS.gene59845:intron | 35.0% |
| ! | GAGAGCACAAGATTTACATA+TGG | - | chr8.3:53987636-53987655 | MS.gene59845:intron | 35.0% |
| ! | GTTTGAAGTGTGTATAAGGA+GGG | - | chr8.3:53985972-53985991 | MS.gene59845:CDS | 35.0% |
| ! | TAAACCTTTTGCGATGAGTT+CGG | - | chr8.3:53986457-53986476 | MS.gene59845:intron | 35.0% |
| ! | TAACTCTGGATCACCATTTT+CGG | - | chr8.3:53988167-53988186 | MS.gene59845:intron | 35.0% |
| ! | TAAGGAAGCCCTTATTGATT+TGG | - | chr8.3:53987697-53987716 | MS.gene59845:intron | 35.0% |
| ! | TACCAGTATTTGTTGGTCAA+AGG | - | chr8.3:53986902-53986921 | MS.gene59845:intron | 35.0% |
| ! | TATACCGTTATCCTGTTTTC+TGG | - | chr8.3:53986109-53986128 | MS.gene59845:CDS | 35.0% |
| !! | TAAATAAGCTTTAGGGCGAA+AGG | + | chr8.3:53985524-53985543 | None:intergenic | 35.0% |
| !! | TGATGGAAGCTGTGTTATTT+GGG | - | chr8.3:53986821-53986840 | MS.gene59845:intron | 35.0% |
| AACCAAGTTCATATCCTTGC+AGG | - | chr8.3:53987960-53987979 | MS.gene59845:intron | 40.0% | |
| AAGAACCTCGGTGATCTAAA+TGG | - | chr8.3:53987473-53987492 | MS.gene59845:intron | 40.0% | |
| ACCCTTTGACCAACAAATAC+TGG | + | chr8.3:53986907-53986926 | None:intergenic | 40.0% | |
| AGACAAGTCATTATCCCTGT+GGG | - | chr8.3:53986953-53986972 | MS.gene59845:intron | 40.0% | |
| ATCCGTGCTTCATACACATA+TGG | + | chr8.3:53985620-53985639 | None:intergenic | 40.0% | |
| ATGAAGACGAGCTAGTAAAG+GGG | + | chr8.3:53987024-53987043 | None:intergenic | 40.0% | |
| ATGTGTATGAAGCACGGATA+CGG | - | chr8.3:53985621-53985640 | MS.gene59845:CDS | 40.0% | |
| ATTACCTTCAACTGGACTTG+AGG | + | chr8.3:53988229-53988248 | None:intergenic | 40.0% | |
| CTCCCATTACCAGTATTTGT+TGG | - | chr8.3:53986895-53986914 | MS.gene59845:intron | 40.0% | |
| GATGAAGACGAGCTAGTAAA+GGG | + | chr8.3:53987025-53987044 | None:intergenic | 40.0% | |
| GATGCCATGCCAAATCAATA+AGG | + | chr8.3:53987709-53987728 | None:intergenic | 40.0% | |
| GCTGCATGTTTCAGTAAGTA+TGG | - | chr8.3:53987224-53987243 | MS.gene59845:intron | 40.0% | |
| GTATGGAAACCTGGTTTATG+TGG | - | chr8.3:53987241-53987260 | MS.gene59845:intron | 40.0% | |
| GTCTGATGTCAATGAAGATG+AGG | - | chr8.3:53987990-53988009 | MS.gene59845:intron | 40.0% | |
| GTTGAACTGAACAAGAACCT+CGG | - | chr8.3:53987461-53987480 | MS.gene59845:intron | 40.0% | |
| GTTTATGTGGGAAACTCGAA+AGG | - | chr8.3:53987254-53987273 | MS.gene59845:intron | 40.0% | |
| TACCTGCAAGGATATGAACT+TGG | + | chr8.3:53987965-53987984 | None:intergenic | 40.0% | |
| TCATGTGACTTAGTATCCCT+AGG | + | chr8.3:53985280-53985299 | None:intergenic | 40.0% | |
| TCCTGAAATCTAATCCCACA+AGG | + | chr8.3:53986584-53986603 | None:intergenic | 40.0% | |
| TCCTTGTGGGATTAGATTTC+AGG | - | chr8.3:53986580-53986599 | MS.gene59845:intron | 40.0% | |
| TCTGGAAAATCACCTTGCAA+CGG | + | chr8.3:53985218-53985237 | None:intergenic | 40.0% | |
| TGGACCAGAAAACAGGATAA+CGG | + | chr8.3:53986116-53986135 | None:intergenic | 40.0% | |
| TGTGAACGTTGTATGGTCAT+AGG | - | chr8.3:53987902-53987921 | MS.gene59845:intron | 40.0% | |
| TTAATGAGGGTGAATGTGTG+TGG | - | chr8.3:53986365-53986384 | MS.gene59845:CDS | 40.0% | |
| TTACTGAAACATGCAGCAGT+AGG | + | chr8.3:53987221-53987240 | None:intergenic | 40.0% | |
| TTGTATAGTGTGTAGCGGTA+TGG | + | chr8.3:53985827-53985846 | None:intergenic | 40.0% | |
| TTGTGGGATTAGATTTCAGG+AGG | - | chr8.3:53986583-53986602 | MS.gene59845:intron | 40.0% | |
| TTTACTAGCTCGTCTTCATC+CGG | - | chr8.3:53987025-53987044 | MS.gene59845:intron | 40.0% | |
| ! | AGTATTTGTTGGTCAAAGGG+TGG | - | chr8.3:53986906-53986925 | MS.gene59845:intron | 40.0% |
| ! | ATCACCATTTTCGGAAGAAG+TGG | - | chr8.3:53988176-53988195 | MS.gene59845:intron | 40.0% |
| ! | ATCGATTGGTTGCCCTAATT+AGG | - | chr8.3:53985875-53985894 | MS.gene59845:CDS | 40.0% |
| ! | ATTGGTGACAGCAATAACTC+TGG | - | chr8.3:53988153-53988172 | MS.gene59845:intron | 40.0% |
| ! | CATTAACTTGAGGGCAGATT+TGG | + | chr8.3:53985465-53985484 | None:intergenic | 40.0% |
| ! | CGTGAATGGCATTAACTTGA+GGG | + | chr8.3:53985474-53985493 | None:intergenic | 40.0% |
| ! | GCTCTAACTTCATCTTTTGG+CGG | + | chr8.3:53987437-53987456 | None:intergenic | 40.0% |
| ! | GGTTTGAAGTGTGTATAAGG+AGG | - | chr8.3:53985971-53985990 | MS.gene59845:CDS | 40.0% |
| ! | GTTCTGTCTGTTTCTTTGAG+TGG | - | chr8.3:53987743-53987762 | MS.gene59845:intron | 40.0% |
| ! | TGAGGAAAATGAGGAGTATG+TGG | - | chr8.3:53987835-53987854 | MS.gene59845:intron | 40.0% |
| ! | TGTATAAGGAGGGAAAGTGT+AGG | - | chr8.3:53985982-53986001 | MS.gene59845:CDS | 40.0% |
| !! | AAGCCCTTATTGATTTGGCA+TGG | - | chr8.3:53987702-53987721 | MS.gene59845:intron | 40.0% |
| !! | AGATTTGGTTCTCATGCAAG+TGG | - | chr8.3:53986250-53986269 | MS.gene59845:CDS | 40.0% |
| !! | CAAGGGTGTTAATCTGCAAT+TGG | + | chr8.3:53985922-53985941 | None:intergenic | 40.0% |
| AACAACCTGTCATCCTGTTC+AGG | + | chr8.3:53988117-53988136 | None:intergenic | 45.0% | |
| ACTACTGAACCACCAGAGAT+AGG | + | chr8.3:53987329-53987348 | None:intergenic | 45.0% | |
| ATATCAGAGTCGCAGAAAGC+AGG | + | chr8.3:53988045-53988064 | None:intergenic | 45.0% | |
| ATGTTCCTGAACAGGATGAC+AGG | - | chr8.3:53988109-53988128 | MS.gene59845:intron | 45.0% | |
| CAACACCATTTAGATCACCG+AGG | + | chr8.3:53987481-53987500 | None:intergenic | 45.0% | |
| CACCAAGCAGAAAGATGGTT+TGG | + | chr8.3:53987057-53987076 | None:intergenic | 45.0% | |
| CAGACAAGTCATTATCCCTG+TGG | - | chr8.3:53986952-53986971 | MS.gene59845:intron | 45.0% | |
| CATGTTGAAGATCCGTTGCA+AGG | - | chr8.3:53985203-53985222 | MS.gene59845:CDS | 45.0% | |
| CTCCAAACCATCTTTCTGCT+TGG | - | chr8.3:53987052-53987071 | MS.gene59845:intron | 45.0% | |
| CTGCATCTGAATGTGTGGAT+TGG | - | chr8.3:53986685-53986704 | MS.gene59845:intron | 45.0% | |
| GAAAATCCTTGAAGGGCCTA+AGG | - | chr8.3:53987679-53987698 | MS.gene59845:intron | 45.0% | |
| GACAGAACAATTGGACGTAC+AGG | + | chr8.3:53987731-53987750 | None:intergenic | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | + | chr8.3:53988183-53988202 | None:intergenic | 45.0% | |
| GGATGAAGACGAGCTAGTAA+AGG | + | chr8.3:53987026-53987045 | None:intergenic | 45.0% | |
| GGGATGTCTTGAGTGGTAAA+AGG | - | chr8.3:53986973-53986992 | MS.gene59845:intron | 45.0% | |
| GTCAACAATCATCGGAGTAC+AGG | + | chr8.3:53987090-53987109 | None:intergenic | 45.0% | |
| GTCATCCTGTTCAGGAACAT+CGG | + | chr8.3:53988109-53988128 | None:intergenic | 45.0% | |
| GTTGAGAAGTTGAAGGCTGT+AGG | - | chr8.3:53987497-53987516 | MS.gene59845:intron | 45.0% | |
| TCATCCTGTTCAGGAACATC+GGG | + | chr8.3:53988108-53988127 | None:intergenic | 45.0% | |
| TCGAGTTTCCCACATAAACC+AGG | + | chr8.3:53987253-53987272 | None:intergenic | 45.0% | |
| TCGGAAGAAGTGGTAGCAAA+TGG | - | chr8.3:53988186-53988205 | MS.gene59845:intron | 45.0% | |
| TCTCCATCACCACTGAAACA+GGG | + | chr8.3:53987587-53987606 | None:intergenic | 45.0% | |
| TCTGTCTCTGACAAACCAAG+TGG | - | chr8.3:53987143-53987162 | MS.gene59845:intron | 45.0% | |
| TGTTCAGGAACATCGGGAAT+GGG | + | chr8.3:53988102-53988121 | None:intergenic | 45.0% | |
| TTACTAGCTCGTCTTCATCC+GGG | - | chr8.3:53987026-53987045 | MS.gene59845:intron | 45.0% | |
| TTGACCGAACTCATCGCAAA+AGG | + | chr8.3:53986464-53986483 | None:intergenic | 45.0% | |
| ! | AATCACGAAAGTGCACTGGA+AGG | - | chr8.3:53987559-53987578 | MS.gene59845:intron | 45.0% |
| ! | ATCAGACCCTTTTACCTGCA+AGG | + | chr8.3:53987977-53987996 | None:intergenic | 45.0% |
| ! | ATGCAATCACGAAAGTGCAC+TGG | - | chr8.3:53987555-53987574 | MS.gene59845:intron | 45.0% |
| ! | CAAGCAGAAAGATGGTTTGG+AGG | + | chr8.3:53987054-53987073 | None:intergenic | 45.0% |
| ! | GCAAGGTGATTTTCCAGAAG+TGG | - | chr8.3:53985220-53985239 | MS.gene59845:CDS | 45.0% |
| ! | GCGTGAATGGCATTAACTTG+AGG | + | chr8.3:53985475-53985494 | None:intergenic | 45.0% |
| !! | TTTCAGTGGTGATGGAGAGT+GGG | - | chr8.3:53987589-53987608 | MS.gene59845:intron | 45.0% |
| ACATCGGGAATGGGAGATAC+TGG | + | chr8.3:53988093-53988112 | None:intergenic | 50.0% | |
| ACATGCAGCAGTAGGTGTGA+AGG | + | chr8.3:53987213-53987232 | None:intergenic | 50.0% | |
| ACCACCAGAGATAGGAACCA+TGG | + | chr8.3:53987321-53987340 | None:intergenic | 50.0% | |
| ACCACTCAAGACATCCCACA+GGG | + | chr8.3:53986970-53986989 | None:intergenic | 50.0% | |
| ATCATCGGAGTACAGGACAG+AGG | + | chr8.3:53987083-53987102 | None:intergenic | 50.0% | |
| CATGCCTCAAGTCCAGTTGA+AGG | - | chr8.3:53988222-53988241 | MS.gene59845:intron | 50.0% | |
| CATTCCCGATGTTCCTGAAC+AGG | - | chr8.3:53988101-53988120 | MS.gene59845:intron | 50.0% | |
| CTCTCCATCACCACTGAAAC+AGG | + | chr8.3:53987588-53987607 | None:intergenic | 50.0% | |
| CTGTTCAGGAACATCGGGAA+TGG | + | chr8.3:53988103-53988122 | None:intergenic | 50.0% | |
| GAATCAGCTGGCTGCAATGA+TGG | - | chr8.3:53986804-53986823 | MS.gene59845:intron | 50.0% | |
| GCTGCTATAGTGGCATTGCA+CGG | - | chr8.3:53985361-53985380 | MS.gene59845:CDS | 50.0% | |
| GGACACACCAAGCAGAAAGA+TGG | + | chr8.3:53987062-53987081 | None:intergenic | 50.0% | |
| GGCGTGACATTACCTTCAAC+TGG | + | chr8.3:53988237-53988256 | None:intergenic | 50.0% | |
| GTGTAGGTCTCCTGGATACT+CGG | - | chr8.3:53985998-53986017 | MS.gene59845:CDS | 50.0% | |
| TACCACTCAAGACATCCCAC+AGG | + | chr8.3:53986971-53986990 | None:intergenic | 50.0% | |
| TACTAGCTCGTCTTCATCCG+GGG | - | chr8.3:53987027-53987046 | MS.gene59845:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr8.3:53985746-53985765 | None:intergenic | 50.0% | |
| TGTAGGTCTCCTGGATACTC+GGG | - | chr8.3:53985999-53986018 | MS.gene59845:CDS | 50.0% | |
| ! | AAAGATGGTTTGGAGGACCC+CGG | + | chr8.3:53987047-53987066 | None:intergenic | 50.0% |
| ! | TGCACGGCATTTTTGTGCAG+TGG | - | chr8.3:53985377-53985396 | MS.gene59845:CDS | 50.0% |
| !! | GTTGGTGGTTCTGCTAGCAA+AGG | - | chr8.3:53987614-53987633 | MS.gene59845:intron | 50.0% |
| !! | GTTTCAGTGGTGATGGAGAG+TGG | - | chr8.3:53987588-53987607 | MS.gene59845:intron | 50.0% |
| AACCCTGCCTCACGCAACAA+GGG | - | chr8.3:53987170-53987189 | MS.gene59845:intron | 55.0% | |
| AACCCTTGTTGCGTGAGGCA+GGG | + | chr8.3:53987175-53987194 | None:intergenic | 55.0% | |
| ACACTGACGCATATCCGACC+GGG | - | chr8.3:53985709-53985728 | MS.gene59845:CDS | 55.0% | |
| AGCAGAACCCTTGTTGCGTG+AGG | + | chr8.3:53987180-53987199 | None:intergenic | 55.0% | |
| ATCCCATACCCCGAGTATCC+AGG | + | chr8.3:53986011-53986030 | None:intergenic | 55.0% | |
| CGTGCCATGGTTCCTATCTC+TGG | - | chr8.3:53987314-53987333 | MS.gene59845:intron | 55.0% | |
| CTCCTGGATACTCGGGGTAT+GGG | - | chr8.3:53986006-53986025 | MS.gene59845:CDS | 55.0% | |
| CTGCGACTCTGATATGTCCG+AGG | - | chr8.3:53988050-53988069 | MS.gene59845:intron | 55.0% | |
| GACACTGACGCATATCCGAC+CGG | - | chr8.3:53985708-53985727 | MS.gene59845:CDS | 55.0% | |
| GCACCCTGTTTCAGTGGTGA+TGG | - | chr8.3:53987581-53987600 | MS.gene59845:intron | 55.0% | |
| GCACGGATACGGACACAACA+CGG | - | chr8.3:53985632-53985651 | MS.gene59845:CDS | 55.0% | |
| GCCATGGTTCCTATCTCTGG+TGG | - | chr8.3:53987317-53987336 | MS.gene59845:intron | 55.0% | |
| GTAGGTCTCCTGGATACTCG+GGG | - | chr8.3:53986000-53986019 | MS.gene59845:CDS | 55.0% | |
| TAACCCTGCCTCACGCAACA+AGG | - | chr8.3:53987169-53987188 | MS.gene59845:intron | 55.0% | |
| TCACGCAACAAGGGTTCTGC+TGG | - | chr8.3:53987179-53987198 | MS.gene59845:intron | 55.0% | |
| TCCCTGTGGGATGTCTTGAG+TGG | - | chr8.3:53986966-53986985 | MS.gene59845:intron | 55.0% | |
| TCTCCTGGATACTCGGGGTA+TGG | - | chr8.3:53986005-53986024 | MS.gene59845:CDS | 55.0% | |
| TGCAGCAGTAGGTGTGAAGG+AGG | + | chr8.3:53987210-53987229 | None:intergenic | 55.0% | |
| TTGTTGCGTGAGGCAGGGTT+AGG | + | chr8.3:53987170-53987189 | None:intergenic | 55.0% | |
| ! | GAGGGAAAGTGTAGGTCTCC+TGG | - | chr8.3:53985990-53986009 | MS.gene59845:CDS | 55.0% |
| !! | GATGGAGAGTGGGTTGTTGG+TGG | - | chr8.3:53987599-53987618 | MS.gene59845:intron | 55.0% |
| !! | GGTGATGGAGAGTGGGTTGT+TGG | - | chr8.3:53987596-53987615 | MS.gene59845:intron | 55.0% |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | - | chr8.3:53987575-53987594 | MS.gene59845:intron | 55.0% |
| GAACCCTTGTTGCGTGAGGC+AGG | + | chr8.3:53987176-53987195 | None:intergenic | 60.0% | |
| GAGGCAGGGTTAGGTCCACT+TGG | + | chr8.3:53987161-53987180 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr8.3:53985740-53985759 | None:intergenic | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | + | chr8.3:53987688-53987707 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr8.3:53985730-53985749 | None:intergenic | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | - | chr8.3:53985726-53985745 | MS.gene59845:CDS | 65.0% | |
| AGATGGCGAGGTGCGTGCCA+TGG | - | chr8.3:53987301-53987320 | MS.gene59845:intron | 65.0% | |
| ! | CGGATTAGGCGTGTCCCGGT+CGG | + | chr8.3:53985726-53985745 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 53984958 | 53988275 | 53984958 | ID=MS.gene59845 |
| chr8.3 | mRNA | 53984958 | 53988275 | 53984958 | ID=MS.gene59845.t1;Parent=MS.gene59845 |
| chr8.3 | exon | 53988257 | 53988275 | 53988257 | ID=MS.gene59845.t1.exon1;Parent=MS.gene59845.t1 |
| chr8.3 | CDS | 53988257 | 53988275 | 53988257 | ID=cds.MS.gene59845.t1;Parent=MS.gene59845.t1 |
| chr8.3 | exon | 53985335 | 53986422 | 53985335 | ID=MS.gene59845.t1.exon2;Parent=MS.gene59845.t1 |
| chr8.3 | CDS | 53985335 | 53986422 | 53985335 | ID=cds.MS.gene59845.t1;Parent=MS.gene59845.t1 |
| chr8.3 | exon | 53984958 | 53985251 | 53984958 | ID=MS.gene59845.t1.exon3;Parent=MS.gene59845.t1 |
| chr8.3 | CDS | 53984958 | 53985251 | 53984958 | ID=cds.MS.gene59845.t1;Parent=MS.gene59845.t1 |
| Gene Sequence |
| Protein sequence |
