Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59966.t1 | XP_003628041.1 | 94.6 | 497 | 27 | 0 | 1 | 497 | 1 | 497 | 1.10E-272 | 948.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59966.t1 | Q5E915 | 70.3 | 485 | 139 | 3 | 1 | 485 | 1 | 480 | 2.0e-195 | 683.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59966.t1 | Q1S5M0 | 94.6 | 497 | 27 | 0 | 1 | 497 | 1 | 497 | 7.6e-273 | 948.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024821 | MS.gene59966 | PPI |
| MS.gene40494 | MS.gene59966 | PPI |
| MS.gene60096 | MS.gene59966 | PPI |
| MS.gene59966 | MS.gene75146 | PPI |
| MS.gene016615 | MS.gene59966 | PPI |
| MS.gene59966 | MS.gene88509 | PPI |
| MS.gene056221 | MS.gene59966 | PPI |
| MS.gene058069 | MS.gene59966 | PPI |
| MS.gene59966 | MS.gene90863 | PPI |
| MS.gene21793 | MS.gene59966 | PPI |
| MS.gene037409 | MS.gene59966 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59966.t1 | MTR_8g041740 | 94.567 | 497 | 27 | 0 | 1 | 497 | 1 | 497 | 0.0 | 942 |
| MS.gene59966.t1 | MTR_8g045440 | 91.549 | 497 | 42 | 0 | 1 | 497 | 1 | 497 | 0.0 | 905 |
| MS.gene59966.t1 | MTR_8g045463 | 88.438 | 493 | 55 | 1 | 7 | 497 | 7 | 499 | 0.0 | 868 |
| MS.gene59966.t1 | MTR_8g045470 | 88.438 | 493 | 55 | 1 | 7 | 497 | 7 | 499 | 0.0 | 868 |
| MS.gene59966.t1 | MTR_8g045440 | 93.797 | 403 | 25 | 0 | 1 | 403 | 1 | 403 | 0.0 | 750 |
| MS.gene59966.t1 | MTR_5g069620 | 74.419 | 86 | 22 | 0 | 38 | 123 | 8 | 93 | 1.88e-37 | 133 |
| MS.gene59966.t1 | MTR_7g086360 | 22.485 | 338 | 202 | 11 | 29 | 362 | 61 | 342 | 9.38e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59966.t1 | AT3G21060 | 70.431 | 487 | 139 | 3 | 1 | 487 | 1 | 482 | 0.0 | 673 |
Find 125 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACCACTTCTTCCGAAAA+TGG | 0.235642 | 8.4:+57742612 | None:intergenic |
| TGAGTGGAATAGTTTATATC+TGG | 0.238272 | 8.4:-57743033 | MS.gene59966:CDS |
| AGAAGTAATAGAAGAGTATT+TGG | 0.243954 | 8.4:-57746600 | MS.gene59966:CDS |
| CTCTCCATCACCACTGAAAC+AGG | 0.282312 | 8.4:+57743207 | None:intergenic |
| TTCATATCCTTGCAGGTAAA+AGG | 0.287426 | 8.4:-57742825 | MS.gene59966:intron |
| TCCTCAATCTCTTTGAAATC+AGG | 0.297441 | 8.4:+57742974 | None:intergenic |
| AAATACTCTTCTATTACTTC+TGG | 0.298446 | 8.4:+57746602 | None:intergenic |
| CCAGTTCTCAATGTAATCTT+TGG | 0.299795 | 8.4:+57743009 | None:intergenic |
| ATGATGGAAGCTGTGTTATC+TGG | 0.306253 | 8.4:-57743972 | MS.gene59966:CDS |
| TAGAAAGTTCTTCAAAGATT+GGG | 0.331449 | 8.4:-57742656 | MS.gene59966:CDS |
| ACCGATAATGGAGTTGTTCA+TGG | 0.343174 | 8.4:+57746812 | None:intergenic |
| CTCCCATCACCAGTATTTGT+TGG | 0.346822 | 8.4:-57743897 | MS.gene59966:CDS |
| GATGCCACGCTAAATCAATA+AGG | 0.351990 | 8.4:+57743086 | None:intergenic |
| AGTGCTCTAACTTCATCTTT+TGG | 0.360566 | 8.4:+57743355 | None:intergenic |
| GGTGATGGAGAGTGGGTTGT+TGG | 0.362512 | 8.4:-57743196 | MS.gene59966:CDS |
| AGGGGAAAACTAACCGATAA+TGG | 0.374362 | 8.4:+57746800 | None:intergenic |
| TTACTAGCTCGTCTTCATCC+TGG | 0.377800 | 8.4:-57743766 | MS.gene59966:CDS |
| TTAGAAAGTTCTTCAAAGAT+TGG | 0.378427 | 8.4:-57742657 | MS.gene59966:CDS |
| GGCATAACATTACCTTCAAC+TGG | 0.379825 | 8.4:+57742558 | None:intergenic |
| ACCATGAACAACTCCATTAT+CGG | 0.399710 | 8.4:-57746813 | MS.gene59966:intron |
| AGTGCCATGGTTCCTATCTC+TGG | 0.400180 | 8.4:-57743478 | MS.gene59966:CDS |
| AATACTCTTCTATTACTTCT+GGG | 0.404813 | 8.4:+57746603 | None:intergenic |
| ACACTTTGACCAACAAATAC+TGG | 0.409133 | 8.4:+57743888 | None:intergenic |
| ACCGAGGTTCTCTTTAAGTT+CGG | 0.410950 | 8.4:+57743330 | None:intergenic |
| TACTAGCTCGTCTTCATCCT+GGG | 0.415673 | 8.4:-57743765 | MS.gene59966:CDS |
| GAACACTTGTTGCGTGAGGC+AGG | 0.420528 | 8.4:+57743619 | None:intergenic |
| GGGCTTCCTTAGGCCCTTCA+AGG | 0.426153 | 8.4:+57743107 | None:intergenic |
| AAAGAAACAGATACAACAAT+TGG | 0.427149 | 8.4:+57743055 | None:intergenic |
| CTTGTAATTCACGGTAAAGA+TGG | 0.432879 | 8.4:-57743508 | MS.gene59966:CDS |
| CAAAGAGATTGAGGAAAATG+AGG | 0.433376 | 8.4:-57742966 | MS.gene59966:CDS |
| TTGTTCAGGTACATCGCGAC+AGG | 0.437991 | 8.4:+57742692 | None:intergenic |
| TGAGGAAAATGAGGAGTATG+TGG | 0.443627 | 8.4:-57742957 | MS.gene59966:CDS |
| ACTACTGAACCACCAGAGAT+AGG | 0.444412 | 8.4:+57743466 | None:intergenic |
| TCGGAAGAAGTGGTAGCAAC+TGG | 0.445844 | 8.4:-57742606 | MS.gene59966:CDS |
| GGTGAAATTCTTGTAATTCA+CGG | 0.447644 | 8.4:-57743517 | MS.gene59966:CDS |
| TTGTTGCGTGAGGCAGGGTT+TGG | 0.448991 | 8.4:+57743625 | None:intergenic |
| GGGATGTCATGAGTGGTAAA+AGG | 0.453340 | 8.4:-57743819 | MS.gene59966:CDS |
| TAGAGCACAAGATTTACATA+TGG | 0.454505 | 8.4:-57743156 | MS.gene59966:CDS |
| GATGAAGACGAGCTAGTAAA+GGG | 0.455276 | 8.4:+57743770 | None:intergenic |
| TTTGAATCCTGACACTGATA+AGG | 0.456843 | 8.4:-57742915 | MS.gene59966:intron |
| ACTCAAATGATAGAGTAATC+AGG | 0.461981 | 8.4:-57743399 | MS.gene59966:CDS |
| GATGGAGAGTGGGTTGTTGG+TGG | 0.468537 | 8.4:-57743193 | MS.gene59966:CDS |
| CCAAAGATTACATTGAGAAC+TGG | 0.469225 | 8.4:-57743009 | MS.gene59966:CDS |
| TCACATACCTTATCAGTGTC+AGG | 0.470513 | 8.4:+57742908 | None:intergenic |
| CTCAAAACCATCTCTCTGCT+TGG | 0.473149 | 8.4:-57743740 | MS.gene59966:CDS |
| TCCTGATTTCAAAGAGATTG+AGG | 0.473999 | 8.4:-57742975 | MS.gene59966:CDS |
| CGTCGCGGTACCCTTCTTGC+TGG | 0.478409 | 8.4:-57746545 | MS.gene59966:intron |
| GAATCAGCTGGCTGCAATGA+TGG | 0.479058 | 8.4:-57743988 | MS.gene59966:intron |
| CATCTTGTGAAAATCCTTGA+AGG | 0.482006 | 8.4:-57743121 | MS.gene59966:CDS |
| GAGTGGAATAGTTTATATCT+GGG | 0.493993 | 8.4:-57743032 | MS.gene59966:CDS |
| ATGCAATCACGAAGGTGCAC+TGG | 0.494469 | 8.4:-57743237 | MS.gene59966:CDS |
| TAAAGAACATTGTATTCAGC+AGG | 0.503259 | 8.4:-57743444 | MS.gene59966:CDS |
| TGACCAACAAATACTGGTGA+TGG | 0.505055 | 8.4:+57743894 | None:intergenic |
| GAGAGAGTTACCAGCAAGAA+GGG | 0.510441 | 8.4:+57746535 | None:intergenic |
| ATGCCACGCTAAATCAATAA+GGG | 0.511908 | 8.4:+57743087 | None:intergenic |
| GTTGAGAAGTTGAAGGCTGC+AGG | 0.512395 | 8.4:-57743295 | MS.gene59966:CDS |
| GTTGTATCTGTTTCTTTGAG+TGG | 0.520343 | 8.4:-57743049 | MS.gene59966:CDS |
| ACATCGCGACAGGGAGATGC+TGG | 0.520821 | 8.4:+57742702 | None:intergenic |
| GGATGAAGACGAGCTAGTAA+AGG | 0.521076 | 8.4:+57743769 | None:intergenic |
| GAGGCAGGGTTTGGTCCACT+TGG | 0.522870 | 8.4:+57743634 | None:intergenic |
| AAATCAATAAGGGCTTCCTT+AGG | 0.523475 | 8.4:+57743097 | None:intergenic |
| GATACAACAATTGGACGTAC+AGG | 0.524448 | 8.4:+57743064 | None:intergenic |
| GAGAACCTCGGTGATCTAAA+CGG | 0.525846 | 8.4:-57743319 | MS.gene59966:CDS |
| GTTTATGCGGGAAACTCAAA+AGG | 0.526842 | 8.4:-57743538 | MS.gene59966:CDS |
| AGAGAGAGTTACCAGCAAGA+AGG | 0.527004 | 8.4:+57746534 | None:intergenic |
| ATATCAGAGTCGCTGAAAGC+AGG | 0.527495 | 8.4:+57742750 | None:intergenic |
| GCACCCTGTTTCAGTGGTGA+TGG | 0.531362 | 8.4:-57743211 | MS.gene59966:CDS |
| TATGGAAACCTGGTTTATGC+GGG | 0.531736 | 8.4:-57743550 | MS.gene59966:CDS |
| GTTTCAGTGGTGATGGAGAG+TGG | 0.534496 | 8.4:-57743204 | MS.gene59966:CDS |
| TTGAGTTTCCCGCATAAACC+AGG | 0.535434 | 8.4:+57743542 | None:intergenic |
| AGAAAGTTCTTCAAAGATTG+GGG | 0.535995 | 8.4:-57742655 | MS.gene59966:CDS |
| CATGCCTCAAGTCCAGTTGA+AGG | 0.538226 | 8.4:-57742570 | MS.gene59966:CDS |
| TCACGCAACAAGTGTTCTGA+TGG | 0.542864 | 8.4:-57743613 | MS.gene59966:CDS |
| AGAGCACAAGATTTACATAT+GGG | 0.543362 | 8.4:-57743155 | MS.gene59966:CDS |
| AACACTTGTTGCGTGAGGCA+GGG | 0.547477 | 8.4:+57743620 | None:intergenic |
| AAACGGTGTTGAGAAGTTGA+AGG | 0.549513 | 8.4:-57743302 | MS.gene59966:CDS |
| TGATGGAAGCTGTGTTATCT+GGG | 0.552742 | 8.4:-57743971 | MS.gene59966:CDS |
| GAAAATCCTTGAAGGGCCTA+AGG | 0.556664 | 8.4:-57743113 | MS.gene59966:CDS |
| AATGAAAATAATCTGTTACA+AGG | 0.564074 | 8.4:+57742524 | None:intergenic |
| ATTACCTTCAACTGGACTTG+AGG | 0.564220 | 8.4:+57742566 | None:intergenic |
| AAGCTCTTTAGCAATGCCCC+TGG | 0.567723 | 8.4:+57743939 | None:intergenic |
| GTGTTTAAGTCAACAATCAT+CGG | 0.569428 | 8.4:+57743697 | None:intergenic |
| TACCACTCATGACATCCCAC+AGG | 0.572721 | 8.4:+57743824 | None:intergenic |
| GATTATGAAGATCCGTTGCA+AGG | 0.573855 | 8.4:-57746632 | MS.gene59966:intron |
| GTATGGAAACCTGGTTTATG+CGG | 0.575213 | 8.4:-57743551 | MS.gene59966:CDS |
| ATTGGGGACAGCAATAACTC+TGG | 0.576784 | 8.4:-57742639 | MS.gene59966:CDS |
| TTTCAGTGGTGATGGAGAGT+GGG | 0.579791 | 8.4:-57743203 | MS.gene59966:CDS |
| TGGAAGGCACCCTGTTTCAG+TGG | 0.579970 | 8.4:-57743217 | MS.gene59966:CDS |
| ATTTACATATGGGATAGAGC+TGG | 0.580981 | 8.4:-57743145 | MS.gene59966:CDS |
| GGACACGCCAAGCAGAGAGA+TGG | 0.582568 | 8.4:+57743733 | None:intergenic |
| GCCATGGTTCCTATCTCTGG+TGG | 0.585768 | 8.4:-57743475 | MS.gene59966:CDS |
| ATAGAAGAGTATTTGGAACA+TGG | 0.594969 | 8.4:-57746593 | MS.gene59966:CDS |
| TTACTAAAACATGCAGCAGT+AGG | 0.595182 | 8.4:+57743574 | None:intergenic |
| TAGATAACATAGCTCTTCCT+CGG | 0.597086 | 8.4:+57742725 | None:intergenic |
| AACATTGTATTCAGCAGGAA+CGG | 0.597939 | 8.4:-57743439 | MS.gene59966:CDS |
| GACCAACAAATACTGGTGAT+GGG | 0.601286 | 8.4:+57743895 | None:intergenic |
| ATCTTGTGAAAATCCTTGAA+GGG | 0.602213 | 8.4:-57743120 | MS.gene59966:CDS |
| ACATGCAGCAGTAGGTGTGA+AGG | 0.605285 | 8.4:+57743582 | None:intergenic |
| ATCAGAACACTTGTTGCGTG+AGG | 0.606314 | 8.4:+57743615 | None:intergenic |
| CTGACAAGTCGCTATCCCTG+TGG | 0.611774 | 8.4:-57743840 | MS.gene59966:CDS |
| ATGTACCTGAACAAGAAGAC+AGG | 0.619283 | 8.4:-57742683 | MS.gene59966:CDS |
| AGTATTTGTTGGTCAAAGTG+TGG | 0.624701 | 8.4:-57743886 | MS.gene59966:CDS |
| TGATTGCATCTTGAAACTCA+CGG | 0.633891 | 8.4:+57743251 | None:intergenic |
| TGACAAGTCGCTATCCCTGT+GGG | 0.635890 | 8.4:-57743839 | MS.gene59966:CDS |
| TGTTCAGGTACATCGCGACA+GGG | 0.638144 | 8.4:+57742693 | None:intergenic |
| TCTCCATCACCACTGAAACA+GGG | 0.640101 | 8.4:+57743208 | None:intergenic |
| ATCTGATGTCAATGAAGACG+AGG | 0.648566 | 8.4:-57742802 | MS.gene59966:CDS |
| TCTGTCTCTGAGAAACCAAG+TGG | 0.649281 | 8.4:-57743649 | MS.gene59966:CDS |
| ACCACTCATGACATCCCACA+GGG | 0.650263 | 8.4:+57743825 | None:intergenic |
| TCTGGGAAATCACCTTGCAA+CGG | 0.654009 | 8.4:+57746620 | None:intergenic |
| AAGCCCTTATTGATTTAGCG+TGG | 0.655079 | 8.4:-57743090 | MS.gene59966:CDS |
| TGCAGCAGTAGGTGTGAAGG+AGG | 0.657772 | 8.4:+57743585 | None:intergenic |
| AATCACGAAGGTGCACTGGA+AGG | 0.658692 | 8.4:-57743233 | MS.gene59966:CDS |
| ATCATCGGAGCACATGAGAG+AGG | 0.660157 | 8.4:+57743712 | None:intergenic |
| CAGCGACTCTGATATGTCCG+AGG | 0.661449 | 8.4:-57742742 | MS.gene59966:CDS |
| AATTCACGGTAAAGATGGTG+AGG | 0.665137 | 8.4:-57743503 | MS.gene59966:CDS |
| AGATGGTGAGGTGAGTGCCA+TGG | 0.672123 | 8.4:-57743491 | MS.gene59966:CDS |
| ACCACCAGAGATAGGAACCA+TGG | 0.676109 | 8.4:+57743474 | None:intergenic |
| GGATAGCGACTTGTCAGCAG+CGG | 0.680280 | 8.4:+57743846 | None:intergenic |
| TCCCTGTGGGATGTCATGAG+TGG | 0.691387 | 8.4:-57743826 | MS.gene59966:CDS |
| TGTATTGCTTTCAATCGTCG+CGG | 0.697076 | 8.4:-57746560 | MS.gene59966:CDS |
| GCCGAACTTAAAGAGAACCT+CGG | 0.709268 | 8.4:-57743331 | MS.gene59966:CDS |
| ATGAAGACGAGCTAGTAAAG+GGG | 0.710400 | 8.4:+57743771 | None:intergenic |
| GTTTCAAGATGCAATCACGA+AGG | 0.735993 | 8.4:-57743245 | MS.gene59966:CDS |
| CAACACCGTTTAGATCACCG+AGG | 0.770889 | 8.4:+57743314 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATTAATATTAATTA+TGG | - | chr8.4:57742689-57742708 | MS.gene59966:CDS | 0.0% |
| !! | AAAAAAAAAAATTAGAAGAA+AGG | + | chr8.4:57745025-57745044 | None:intergenic | 10.0% |
| !!! | AATAATAAGTATTGAAAAAT+TGG | + | chr8.4:57742584-57742603 | None:intergenic | 10.0% |
| !!! | ATAATAAGTATTGAAAAATT+GGG | + | chr8.4:57742583-57742602 | None:intergenic | 10.0% |
| !!! | ATTTTTCAATACTTATTATT+AGG | - | chr8.4:57742584-57742603 | MS.gene59966:CDS | 10.0% |
| !!! | TTTTTCAATACTTATTATTA+GGG | - | chr8.4:57742585-57742604 | MS.gene59966:CDS | 10.0% |
| !! | TAAGCTTATTTACTTTATAA+TGG | - | chr8.4:57744207-57744226 | MS.gene59966:intron | 15.0% |
| !! | TATAAAGTAAATAAGCTTAA+GGG | + | chr8.4:57744206-57744225 | None:intergenic | 15.0% |
| !! | TGTAGTTATATCAAATTTAT+AGG | - | chr8.4:57742922-57742941 | MS.gene59966:CDS | 15.0% |
| !! | TTATAAAGTAAATAAGCTTA+AGG | + | chr8.4:57744207-57744226 | None:intergenic | 15.0% |
| !!! | AAATTCTAGCATTTTAATTT+GGG | - | chr8.4:57743847-57743866 | MS.gene59966:CDS | 15.0% |
| !!! | TTCTTTCATTTTCTATTTTA+TGG | - | chr8.4:57746490-57746509 | MS.gene59966:intron | 15.0% |
| !!! | TTTTATGAATTATTTACTCA+AGG | - | chr8.4:57745289-57745308 | MS.gene59966:intron | 15.0% |
| !! | GTATTTAATCTGTATATGTA+AGG | - | chr8.4:57744400-57744419 | MS.gene59966:intron | 20.0% |
| !! | TAAAAAACGTTTAGAAGAAT+AGG | + | chr8.4:57742622-57742641 | None:intergenic | 20.0% |
| !! | TAAATCTATTCCATCATTAA+TGG | + | chr8.4:57744975-57744994 | None:intergenic | 20.0% |
| !! | TATGCTTAAATTTGAATTTG+TGG | - | chr8.4:57745237-57745256 | MS.gene59966:intron | 20.0% |
| !! | TATGGAAAGTAAAAAGATAT+TGG | - | chr8.4:57744821-57744840 | MS.gene59966:intron | 20.0% |
| !! | TTAAATTTGAATTTGTGGAT+TGG | - | chr8.4:57745242-57745261 | MS.gene59966:intron | 20.0% |
| !!! | ATTTTACAGTAATTCAACTT+TGG | - | chr8.4:57744882-57744901 | MS.gene59966:intron | 20.0% |
| !!! | CAAATTCTAGCATTTTAATT+TGG | - | chr8.4:57743846-57743865 | MS.gene59966:CDS | 20.0% |
| !!! | GGTATTTTCAAAAAATCATT+AGG | - | chr8.4:57744903-57744922 | MS.gene59966:intron | 20.0% |
| !!! | TTGCTGATTAAAAAAAAGAA+GGG | - | chr8.4:57743653-57743672 | MS.gene59966:CDS | 20.0% |
| !!! | TTTGCTGATTAAAAAAAAGA+AGG | - | chr8.4:57743652-57743671 | MS.gene59966:CDS | 20.0% |
| ! | AAAATATTCTAAGCTCTATG+TGG | + | chr8.4:57744378-57744397 | None:intergenic | 25.0% |
| ! | AAAGAAACAGATACAACAAT+TGG | + | chr8.4:57746297-57746316 | None:intergenic | 25.0% |
| ! | AAATACTCTTCTATTACTTC+TGG | + | chr8.4:57742750-57742769 | None:intergenic | 25.0% |
| ! | AATAAATTGAGGGCAAATTT+GGG | + | chr8.4:57744139-57744158 | None:intergenic | 25.0% |
| ! | AATACTCTTCTATTACTTCT+GGG | + | chr8.4:57742749-57742768 | None:intergenic | 25.0% |
| ! | AGTTGAATTACTGTAAAATG+AGG | + | chr8.4:57744881-57744900 | None:intergenic | 25.0% |
| ! | ATTTGATAAATTGAATCAGC+TGG | - | chr8.4:57745349-57745368 | MS.gene59966:intron | 25.0% |
| ! | CTTGAAACTTTACTGTATAA+TGG | - | chr8.4:57743341-57743360 | MS.gene59966:CDS | 25.0% |
| ! | GTTTGAACCATATGAAAATT+CGG | - | chr8.4:57743078-57743097 | MS.gene59966:CDS | 25.0% |
| ! | TAAATAAGCTTAAGGGTAAA+AGG | + | chr8.4:57744199-57744218 | None:intergenic | 25.0% |
| ! | TAGAAAGTTCTTCAAAGATT+GGG | - | chr8.4:57746693-57746712 | MS.gene59966:intron | 25.0% |
| ! | TCATTGCATTACAAAAGAAT+TGG | + | chr8.4:57744761-57744780 | None:intergenic | 25.0% |
| ! | TGAATTCCTTGTAGTTATTA+GGG | - | chr8.4:57743176-57743195 | MS.gene59966:CDS | 25.0% |
| ! | TTAGAAAGTTCTTCAAAGAT+TGG | - | chr8.4:57746692-57746711 | MS.gene59966:intron | 25.0% |
| ! | TTTGAACCATATGAAAATTC+GGG | - | chr8.4:57743079-57743098 | MS.gene59966:CDS | 25.0% |
| !! | AAAGATATTGGTTATGACAA+TGG | - | chr8.4:57744833-57744852 | MS.gene59966:intron | 25.0% |
| !! | AAATTTATAGGATTTTACCG+AGG | - | chr8.4:57742934-57742953 | MS.gene59966:CDS | 25.0% |
| !! | ACATAGAGCTTAGAATATTT+TGG | - | chr8.4:57744377-57744396 | MS.gene59966:intron | 25.0% |
| !! | CATAGAGCTTAGAATATTTT+GGG | - | chr8.4:57744378-57744397 | MS.gene59966:intron | 25.0% |
| !! | TATATCTTTATCCTGTTTTC+TGG | - | chr8.4:57744734-57744753 | MS.gene59966:intron | 25.0% |
| !! | TTGCTATTGATATGATAGTA+TGG | - | chr8.4:57744803-57744822 | MS.gene59966:intron | 25.0% |
| !!! | AGAAGTAATAGAAGAGTATT+TGG | - | chr8.4:57742749-57742768 | MS.gene59966:CDS | 25.0% |
| !!! | TAGTTGGTTTGAAAAGAATT+AGG | - | chr8.4:57742881-57742900 | MS.gene59966:intron | 25.0% |
| AAAAATTGGGAGAAGAAAAG+GGG | + | chr8.4:57742570-57742589 | None:intergenic | 30.0% | |
| AAACGTTTAGAAGAATAGGA+AGG | + | chr8.4:57742618-57742637 | None:intergenic | 30.0% | |
| AAACTCATTGCAAAAGGTTT+AGG | + | chr8.4:57745060-57745079 | None:intergenic | 30.0% | |
| AAGGAACAAACACAATATAG+GGG | + | chr8.4:57743583-57743602 | None:intergenic | 30.0% | |
| ACAAGGAACAAACACAATAT+AGG | + | chr8.4:57743585-57743604 | None:intergenic | 30.0% | |
| ACCCACAAATTGGATAAAAA+CGG | + | chr8.4:57743475-57743494 | None:intergenic | 30.0% | |
| ACTCAAATGATAGAGTAATC+AGG | - | chr8.4:57745950-57745969 | MS.gene59966:intron | 30.0% | |
| AGAAAGTTCTTCAAAGATTG+GGG | - | chr8.4:57746694-57746713 | MS.gene59966:intron | 30.0% | |
| AGAGCACAAGATTTACATAT+GGG | - | chr8.4:57746194-57746213 | MS.gene59966:intron | 30.0% | |
| AGCATATAGTATGCCTAATT+CGG | + | chr8.4:57744499-57744518 | None:intergenic | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | - | chr8.4:57746229-57746248 | MS.gene59966:intron | 30.0% | |
| CAAATTTGCCCTCAATTTAT+TGG | - | chr8.4:57744138-57744157 | MS.gene59966:intron | 30.0% | |
| CAAGGAACAAACACAATATA+GGG | + | chr8.4:57743584-57743603 | None:intergenic | 30.0% | |
| CAATAAATTGAGGGCAAATT+TGG | + | chr8.4:57744140-57744159 | None:intergenic | 30.0% | |
| CCAAATAAAAACAGTGTGAA+TGG | + | chr8.4:57743317-57743336 | None:intergenic | 30.0% | |
| CCCTAATTAGGAAAAATGTT+GGG | - | chr8.4:57744434-57744453 | MS.gene59966:intron | 30.0% | |
| GAAAAATTGGGAGAAGAAAA+GGG | + | chr8.4:57742571-57742590 | None:intergenic | 30.0% | |
| GAATTCCTTGTAGTTATTAG+GGG | - | chr8.4:57743177-57743196 | MS.gene59966:CDS | 30.0% | |
| GAGTGGAATAGTTTATATCT+GGG | - | chr8.4:57746317-57746336 | MS.gene59966:intron | 30.0% | |
| GGTGAAATTCTTGTAATTCA+CGG | - | chr8.4:57745832-57745851 | MS.gene59966:intron | 30.0% | |
| GTGAATGACCAATAAATTGA+GGG | + | chr8.4:57744149-57744168 | None:intergenic | 30.0% | |
| GTGAATTCCTTGTAGTTATT+AGG | - | chr8.4:57743175-57743194 | MS.gene59966:CDS | 30.0% | |
| GTGTTTAAGTCAACAATCAT+CGG | + | chr8.4:57745655-57745674 | None:intergenic | 30.0% | |
| TAAAGAACATTGTATTCAGC+AGG | - | chr8.4:57745905-57745924 | MS.gene59966:intron | 30.0% | |
| TAAAGCCAATAATCTGCAAT+TGG | + | chr8.4:57744469-57744488 | None:intergenic | 30.0% | |
| TAAGGTATGTGAACGTTATA+TGG | - | chr8.4:57746452-57746471 | MS.gene59966:intron | 30.0% | |
| TACTGTGACGAAAACAATAA+TGG | - | chr8.4:57743056-57743075 | MS.gene59966:CDS | 30.0% | |
| TAGAGCACAAGATTTACATA+TGG | - | chr8.4:57746193-57746212 | MS.gene59966:intron | 30.0% | |
| TATTCTCCTTCTTTGCTAAT+TGG | + | chr8.4:57744090-57744109 | None:intergenic | 30.0% | |
| TCACTGAAATACACAATGTT+TGG | + | chr8.4:57742844-57742863 | None:intergenic | 30.0% | |
| TCCCTAATTAGGAAAAATGT+TGG | - | chr8.4:57744433-57744452 | MS.gene59966:intron | 30.0% | |
| TCTGTATCACATTGATACTA+GGG | - | chr8.4:57744683-57744702 | MS.gene59966:intron | 30.0% | |
| TGAAAAATTGGGAGAAGAAA+AGG | + | chr8.4:57742572-57742591 | None:intergenic | 30.0% | |
| TGAGTGGAATAGTTTATATC+TGG | - | chr8.4:57746316-57746335 | MS.gene59966:intron | 30.0% | |
| TTCTGTGATACCATTAATGA+TGG | - | chr8.4:57744962-57744981 | MS.gene59966:intron | 30.0% | |
| ! | ACTATACAGCTATAGCATTT+TGG | - | chr8.4:57744319-57744338 | MS.gene59966:intron | 30.0% |
| ! | CCCAACATTTTTCCTAATTA+GGG | + | chr8.4:57744437-57744456 | None:intergenic | 30.0% |
| ! | CTGTTATTTACTACAGAGAT+AGG | + | chr8.4:57744029-57744048 | None:intergenic | 30.0% |
| ! | TAAACCTTTTGCAATGAGTT+TGG | - | chr8.4:57745059-57745078 | MS.gene59966:intron | 30.0% |
| ! | TCCCAACATTTTTCCTAATT+AGG | + | chr8.4:57744438-57744457 | None:intergenic | 30.0% |
| ! | TTTTACCGAGGTTTATATTG+TGG | - | chr8.4:57742946-57742965 | MS.gene59966:CDS | 30.0% |
| ! | TTTTAGTAAGTATGGAAACC+TGG | - | chr8.4:57745789-57745808 | MS.gene59966:intron | 30.0% |
| !! | AATAACTTGAGGGCATATTT+TGG | + | chr8.4:57743293-57743312 | None:intergenic | 30.0% |
| !! | ATAGAAGAGTATTTGGAACA+TGG | - | chr8.4:57742756-57742775 | MS.gene59966:CDS | 30.0% |
| !! | TTCAATGTACTTTGAAGTAG+TGG | - | chr8.4:57744282-57744301 | MS.gene59966:intron | 30.0% |
| !!! | CCATTCACACTGTTTTTATT+TGG | - | chr8.4:57743314-57743333 | MS.gene59966:CDS | 30.0% |
| AAAAACCTGTCTTCTTGTTC+AGG | + | chr8.4:57746674-57746693 | None:intergenic | 35.0% | |
| AAAGAATTGGACCAGAAAAC+AGG | + | chr8.4:57744748-57744767 | None:intergenic | 35.0% | |
| AAATCAATAAGGGCTTCCTT+AGG | + | chr8.4:57746255-57746274 | None:intergenic | 35.0% | |
| AACATTGTATTCAGCAGGAA+CGG | - | chr8.4:57745910-57745929 | MS.gene59966:intron | 35.0% | |
| AAGTTGTGGGATTAGATTTC+AGG | - | chr8.4:57745139-57745158 | MS.gene59966:intron | 35.0% | |
| AATTTCTGCAGTTTCTGTCA+AGG | - | chr8.4:57744576-57744595 | MS.gene59966:intron | 35.0% | |
| ACACTTTGACCAACAAATAC+TGG | + | chr8.4:57745464-57745483 | None:intergenic | 35.0% | |
| AGTAACATGAGTGAGAAAGT+TGG | + | chr8.4:57745327-57745346 | None:intergenic | 35.0% | |
| AGTATCAATGTGATACAGAG+CGG | + | chr8.4:57744682-57744701 | None:intergenic | 35.0% | |
| ATGCCACGCTAAATCAATAA+GGG | + | chr8.4:57746265-57746284 | None:intergenic | 35.0% | |
| ATGTGCACTTTGTAAGTCTT+GGG | - | chr8.4:57743511-57743530 | MS.gene59966:CDS | 35.0% | |
| ATTTACATATGGGATAGAGC+TGG | - | chr8.4:57746204-57746223 | MS.gene59966:intron | 35.0% | |
| ATTTACTACAGAGATAGGCT+TGG | + | chr8.4:57744024-57744043 | None:intergenic | 35.0% | |
| CAAAACATTGAGCTTGAATC+TGG | - | chr8.4:57743700-57743719 | MS.gene59966:CDS | 35.0% | |
| CAAAGAGATTGAGGAAAATG+AGG | - | chr8.4:57746383-57746402 | MS.gene59966:intron | 35.0% | |
| CAGAAAAAACACACCCAAAT+CGG | + | chr8.4:57743414-57743433 | None:intergenic | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | - | chr8.4:57746228-57746247 | MS.gene59966:intron | 35.0% | |
| CCAAAGATTACATTGAGAAC+TGG | - | chr8.4:57746340-57746359 | MS.gene59966:intron | 35.0% | |
| CCAGTTCTCAATGTAATCTT+TGG | + | chr8.4:57746343-57746362 | None:intergenic | 35.0% | |
| CGTGAATGACCAATAAATTG+AGG | + | chr8.4:57744150-57744169 | None:intergenic | 35.0% | |
| CTCTGTATCACATTGATACT+AGG | - | chr8.4:57744682-57744701 | MS.gene59966:intron | 35.0% | |
| CTTGTAATTCACGGTAAAGA+TGG | - | chr8.4:57745841-57745860 | MS.gene59966:intron | 35.0% | |
| GATTGCCAATTGCAGATTAT+TGG | - | chr8.4:57744461-57744480 | MS.gene59966:intron | 35.0% | |
| GCTTTAATTGATGCCGAATT+AGG | - | chr8.4:57744483-57744502 | MS.gene59966:intron | 35.0% | |
| GGAAAAAAACACCCACAAAT+TGG | + | chr8.4:57743485-57743504 | None:intergenic | 35.0% | |
| GTAAATAACAGCTGCTATAG+TGG | - | chr8.4:57744038-57744057 | MS.gene59966:intron | 35.0% | |
| TAGATAACATAGCTCTTCCT+CGG | + | chr8.4:57746627-57746646 | None:intergenic | 35.0% | |
| TATAGCTGTATAGTGTGTAG+CGG | + | chr8.4:57744313-57744332 | None:intergenic | 35.0% | |
| TATTCCTCTGCTATGCTATT+TGG | + | chr8.4:57743231-57743250 | None:intergenic | 35.0% | |
| TCCTGATTTCAAAGAGATTG+AGG | - | chr8.4:57746374-57746393 | MS.gene59966:intron | 35.0% | |
| TCTCCACACAAAAATTTACC+AGG | + | chr8.4:57743924-57743943 | None:intergenic | 35.0% | |
| TCTGTATATGTAAGGTCGAT+TGG | - | chr8.4:57744408-57744427 | MS.gene59966:intron | 35.0% | |
| TGATTGCATCTTGAAACTCA+CGG | + | chr8.4:57746101-57746120 | None:intergenic | 35.0% | |
| TGTGAATGGCAATAACTTGA+GGG | + | chr8.4:57743303-57743322 | None:intergenic | 35.0% | |
| TTACTAAAACATGCAGCAGT+AGG | + | chr8.4:57745778-57745797 | None:intergenic | 35.0% | |
| TTGACCAAACTCATTGCAAA+AGG | + | chr8.4:57745066-57745085 | None:intergenic | 35.0% | |
| TTTCAAACCAACTACAGCAA+GGG | + | chr8.4:57742875-57742894 | None:intergenic | 35.0% | |
| TTTGAATCCTGACACTGATA+AGG | - | chr8.4:57746434-57746453 | MS.gene59966:intron | 35.0% | |
| ! | AGTATTTGTTGGTCAAAGTG+TGG | - | chr8.4:57745463-57745482 | MS.gene59966:intron | 35.0% |
| ! | AGTGCTCTAACTTCATCTTT+TGG | + | chr8.4:57745997-57746016 | None:intergenic | 35.0% |
| ! | ATACAGCTATAGCATTTTGG+TGG | - | chr8.4:57744322-57744341 | MS.gene59966:intron | 35.0% |
| ! | CAGAAACCCGAATTTTCATA+TGG | + | chr8.4:57743088-57743107 | None:intergenic | 35.0% |
| ! | GTTGTATCTGTTTCTTTGAG+TGG | - | chr8.4:57746300-57746319 | MS.gene59966:intron | 35.0% |
| ! | GTTTTTGTTGAACTTCTTGG+TGG | - | chr8.4:57744172-57744191 | MS.gene59966:intron | 35.0% |
| ! | TAACTCTGGATCACCATTTT+CGG | - | chr8.4:57746724-57746743 | MS.gene59966:intron | 35.0% |
| ! | TGACATTTTTACAGTCGAGA+AGG | - | chr8.4:57746574-57746593 | MS.gene59966:CDS | 35.0% |
| ! | TTTTCAAACCAACTACAGCA+AGG | + | chr8.4:57742876-57742895 | None:intergenic | 35.0% |
| !! | AATTCAGTGCTTTCAAGTTG+TGG | - | chr8.4:57745125-57745144 | MS.gene59966:intron | 35.0% |
| !! | ATTCAGTGCTTTCAAGTTGT+GGG | - | chr8.4:57745126-57745145 | MS.gene59966:intron | 35.0% |
| !! | CTATAGCATTTTGGTGGTTT+TGG | - | chr8.4:57744328-57744347 | MS.gene59966:intron | 35.0% |
| !! | TAAGCTGATTTTGTACGCAA+TGG | - | chr8.4:57743946-57743965 | MS.gene59966:CDS | 35.0% |
| !! | TCCTCAATCTCTTTGAAATC+AGG | + | chr8.4:57746378-57746397 | None:intergenic | 35.0% |
| !! | TGGCTTTTTCCAATGATGAT+GGG | - | chr8.4:57743814-57743833 | MS.gene59966:CDS | 35.0% |
| !!! | AGCCGTTTTTATCCAATTTG+TGG | - | chr8.4:57743470-57743489 | MS.gene59966:CDS | 35.0% |
| !!! | ATTTGGGTGTGTTTTTTCTG+TGG | - | chr8.4:57743414-57743433 | MS.gene59966:CDS | 35.0% |
| !!! | GCCGTTTTTATCCAATTTGT+GGG | - | chr8.4:57743471-57743490 | MS.gene59966:CDS | 35.0% |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | - | chr8.4:57745781-57745800 | MS.gene59966:intron | 35.0% |
| !!! | GCTGTTTTTGTTGAACTTCT+TGG | - | chr8.4:57744169-57744188 | MS.gene59966:intron | 35.0% |
| !!! | TATCTGGGATTTTGAAACCA+GGG | - | chr8.4:57745393-57745412 | MS.gene59966:intron | 35.0% |
| !!! | TTATCTGGGATTTTGAAACC+AGG | - | chr8.4:57745392-57745411 | MS.gene59966:intron | 35.0% |
| AAAAACACACCCAAATCGGT+AGG | + | chr8.4:57743410-57743429 | None:intergenic | 40.0% | |
| AAACTATCTATCCCATACCC+TGG | + | chr8.4:57744646-57744665 | None:intergenic | 40.0% | |
| AACATAGACCCCATCATCAT+TGG | + | chr8.4:57743826-57743845 | None:intergenic | 40.0% | |
| AACTATCTATCCCATACCCT+GGG | + | chr8.4:57744645-57744664 | None:intergenic | 40.0% | |
| AAGCTCTATGTGGTCAATGA+AGG | + | chr8.4:57744368-57744387 | None:intergenic | 40.0% | |
| AATTCACGGTAAAGATGGTG+AGG | - | chr8.4:57745846-57745865 | MS.gene59966:intron | 40.0% | |
| ACCGAAATTCAGAAAGGGAA+AGG | + | chr8.4:57743558-57743577 | None:intergenic | 40.0% | |
| AGCTTGAATCTGGACTTGAT+TGG | - | chr8.4:57743710-57743729 | MS.gene59966:CDS | 40.0% | |
| AGGGGAAAACTAACCGATAA+TGG | + | chr8.4:57742552-57742571 | None:intergenic | 40.0% | |
| ATCTGATGTCAATGAAGACG+AGG | - | chr8.4:57746547-57746566 | MS.gene59966:CDS | 40.0% | |
| ATGAAGACGAGCTAGTAAAG+GGG | + | chr8.4:57745581-57745600 | None:intergenic | 40.0% | |
| ATGTACCTGAACAAGAAGAC+AGG | - | chr8.4:57746666-57746685 | MS.gene59966:intron | 40.0% | |
| ATTACCTTCAACTGGACTTG+AGG | + | chr8.4:57746786-57746805 | None:intergenic | 40.0% | |
| ATTTACCAGGCTGCTCTATT+TGG | + | chr8.4:57743911-57743930 | None:intergenic | 40.0% | |
| CAAGACTTACAAAGTGCACA+TGG | + | chr8.4:57743512-57743531 | None:intergenic | 40.0% | |
| CACTTTGTAAGTCTTGGGAT+TGG | - | chr8.4:57743516-57743535 | MS.gene59966:CDS | 40.0% | |
| CATGTGCACTTTGTAAGTCT+TGG | - | chr8.4:57743510-57743529 | MS.gene59966:CDS | 40.0% | |
| CGCAACCACAATATAAACCT+CGG | + | chr8.4:57742954-57742973 | None:intergenic | 40.0% | |
| CTTCACATCGTTGAGAATTG+TGG | - | chr8.4:57742982-57743001 | MS.gene59966:CDS | 40.0% | |
| GACCAACAAATACTGGTGAT+GGG | + | chr8.4:57745457-57745476 | None:intergenic | 40.0% | |
| GATACAACAATTGGACGTAC+AGG | + | chr8.4:57746288-57746307 | None:intergenic | 40.0% | |
| GATGAAGACGAGCTAGTAAA+GGG | + | chr8.4:57745582-57745601 | None:intergenic | 40.0% | |
| GATGCCACGCTAAATCAATA+AGG | + | chr8.4:57746266-57746285 | None:intergenic | 40.0% | |
| GATTATGAAGATCCGTTGCA+AGG | - | chr8.4:57742717-57742736 | MS.gene59966:CDS | 40.0% | |
| GCAGAAATTGAGACCTTACA+GGG | + | chr8.4:57744565-57744584 | None:intergenic | 40.0% | |
| GCCTTTCCCTTTCTGAATTT+CGG | - | chr8.4:57743554-57743573 | MS.gene59966:CDS | 40.0% | |
| GCTTGAATCTGGACTTGATT+GGG | - | chr8.4:57743711-57743730 | MS.gene59966:CDS | 40.0% | |
| GGCATAACATTACCTTCAAC+TGG | + | chr8.4:57746794-57746813 | None:intergenic | 40.0% | |
| GGGTTTCTGCTAATGATTGT+GGG | - | chr8.4:57743099-57743118 | MS.gene59966:CDS | 40.0% | |
| GGTTTATATTGTGGTTGCGT+CGG | - | chr8.4:57742955-57742974 | MS.gene59966:CDS | 40.0% | |
| GTACTGAGTGCATATCTTTC+TGG | - | chr8.4:57745177-57745196 | MS.gene59966:intron | 40.0% | |
| GTATGGAAACCTGGTTTATG+CGG | - | chr8.4:57745798-57745817 | MS.gene59966:intron | 40.0% | |
| GTGTGAATGGCAATAACTTG+AGG | + | chr8.4:57743304-57743323 | None:intergenic | 40.0% | |
| GTTTATGCGGGAAACTCAAA+AGG | - | chr8.4:57745811-57745830 | MS.gene59966:intron | 40.0% | |
| GTTTCAAGATGCAATCACGA+AGG | - | chr8.4:57746104-57746123 | MS.gene59966:intron | 40.0% | |
| TATGGAAACCTGGTTTATGC+GGG | - | chr8.4:57745799-57745818 | MS.gene59966:intron | 40.0% | |
| TCACAAGAACTTCACTGTAG+CGG | + | chr8.4:57743267-57743286 | None:intergenic | 40.0% | |
| TCACATACCTTATCAGTGTC+AGG | + | chr8.4:57746444-57746463 | None:intergenic | 40.0% | |
| TCTATGTGGTCAATGAAGGA+TGG | + | chr8.4:57744364-57744383 | None:intergenic | 40.0% | |
| TGACCAACAAATACTGGTGA+TGG | + | chr8.4:57745458-57745477 | None:intergenic | 40.0% | |
| TGATGGAAGCTGTGTTATCT+GGG | - | chr8.4:57745378-57745397 | MS.gene59966:intron | 40.0% | |
| TGCAGAAATTGAGACCTTAC+AGG | + | chr8.4:57744566-57744585 | None:intergenic | 40.0% | |
| TGCTTAGTCACATGATCTTG+AGG | - | chr8.4:57743970-57743989 | MS.gene59966:CDS | 40.0% | |
| TGTATAAGGAGGGAAAGTCT+AGG | - | chr8.4:57744608-57744627 | MS.gene59966:intron | 40.0% | |
| TGTATTGCTTTCAATCGTCG+CGG | - | chr8.4:57742789-57742808 | MS.gene59966:CDS | 40.0% | |
| TTACAAAGTGCACATGGTCA+AGG | + | chr8.4:57743506-57743525 | None:intergenic | 40.0% | |
| TTACAGGGTAGTTAGACTCT+GGG | + | chr8.4:57744550-57744569 | None:intergenic | 40.0% | |
| TTCCATTGACAAGTCTGCAA+TGG | - | chr8.4:57743762-57743781 | MS.gene59966:CDS | 40.0% | |
| TTGTGGGATTAGATTTCAGG+AGG | - | chr8.4:57745142-57745161 | MS.gene59966:intron | 40.0% | |
| ! | AAACGGTGTTGAGAAGTTGA+AGG | - | chr8.4:57746047-57746066 | MS.gene59966:intron | 40.0% |
| ! | ACCGAGGTTCTCTTTAAGTT+CGG | + | chr8.4:57746022-57746041 | None:intergenic | 40.0% |
| ! | ATCACCATTTTCGGAAGAAG+TGG | - | chr8.4:57746733-57746752 | MS.gene59966:intron | 40.0% |
| ! | ATGATGGAAGCTGTGTTATC+TGG | - | chr8.4:57745377-57745396 | MS.gene59966:intron | 40.0% |
| ! | CAAAATACCCTTGCTGTAGT+TGG | - | chr8.4:57742865-57742884 | MS.gene59966:intron | 40.0% |
| ! | CAAGGTTTGGAGTGTGTATA+AGG | - | chr8.4:57744594-57744613 | MS.gene59966:intron | 40.0% |
| ! | CAGCCTGGTAAATTTTTGTG+TGG | - | chr8.4:57743918-57743937 | MS.gene59966:CDS | 40.0% |
| ! | GCTCTAACTTCATCTTTTGG+CGG | + | chr8.4:57745994-57746013 | None:intergenic | 40.0% |
| ! | GTTTGGAGTGTGTATAAGGA+GGG | - | chr8.4:57744598-57744617 | MS.gene59966:intron | 40.0% |
| ! | TGAGGAAAATGAGGAGTATG+TGG | - | chr8.4:57746392-57746411 | MS.gene59966:intron | 40.0% |
| !! | AAGCCCTTATTGATTTAGCG+TGG | - | chr8.4:57746259-57746278 | MS.gene59966:intron | 40.0% |
| !! | CTGGCTTTTTCCAATGATGA+TGG | - | chr8.4:57743813-57743832 | MS.gene59966:CDS | 40.0% |
| !! | GGCTTTTTCCAATGATGATG+GGG | - | chr8.4:57743815-57743834 | MS.gene59966:CDS | 40.0% |
| !! | GTCGATTGGTTTCCCTAATT+AGG | - | chr8.4:57744422-57744441 | MS.gene59966:intron | 40.0% |
| !!! | ATCTGGGATTTTGAAACCAG+GGG | - | chr8.4:57745394-57745413 | MS.gene59966:intron | 40.0% |
| !!! | CAACTACAGCAAGGGTATTT+TGG | + | chr8.4:57742867-57742886 | None:intergenic | 40.0% |
| !!! | CAGAGTGGATTAGGGATTTT+TGG | + | chr8.4:57744527-57744546 | None:intergenic | 40.0% |
| ACTACTGAACCACCAGAGAT+AGG | + | chr8.4:57745886-57745905 | None:intergenic | 45.0% | |
| ACTCACAGTCTCACAGTAGT+CGG | + | chr8.4:57743743-57743762 | None:intergenic | 45.0% | |
| AGAGAGAGTTACCAGCAAGA+AGG | + | chr8.4:57742818-57742837 | None:intergenic | 45.0% | |
| AGCAGCCCCTAATAACTACA+AGG | + | chr8.4:57743185-57743204 | None:intergenic | 45.0% | |
| ATATCAGAGTCGCTGAAAGC+AGG | + | chr8.4:57746602-57746621 | None:intergenic | 45.0% | |
| ATGTGGTCAATGAAGGATGG+CGG | + | chr8.4:57744361-57744380 | None:intergenic | 45.0% | |
| ATTGGGGACAGCAATAACTC+TGG | - | chr8.4:57746710-57746729 | MS.gene59966:intron | 45.0% | |
| CAGAGTCTAACTACCCTGTA+AGG | - | chr8.4:57744549-57744568 | MS.gene59966:intron | 45.0% | |
| CCCAAGAACCCCAAATCTAA+GGG | + | chr8.4:57743448-57743467 | None:intergenic | 45.0% | |
| CGGGTTTCTGCTAATGATTG+TGG | - | chr8.4:57743098-57743117 | MS.gene59966:CDS | 45.0% | |
| CTCAAAACCATCTCTCTGCT+TGG | - | chr8.4:57745609-57745628 | MS.gene59966:intron | 45.0% | |
| CTCCCATCACCAGTATTTGT+TGG | - | chr8.4:57745452-57745471 | MS.gene59966:intron | 45.0% | |
| CTGCAGTTTCTGTCAAGGTT+TGG | - | chr8.4:57744581-57744600 | MS.gene59966:intron | 45.0% | |
| CTGTATAGTGTGTAGCGGTA+TGG | + | chr8.4:57744308-57744327 | None:intergenic | 45.0% | |
| CTTACAGGGTAGTTAGACTC+TGG | + | chr8.4:57744551-57744570 | None:intergenic | 45.0% | |
| GAAAATCCTTGAAGGGCCTA+AGG | - | chr8.4:57746236-57746255 | MS.gene59966:intron | 45.0% | |
| GAGAACCTCGGTGATCTAAA+CGG | - | chr8.4:57746030-57746049 | MS.gene59966:intron | 45.0% | |
| GAGAGAGTTACCAGCAAGAA+GGG | + | chr8.4:57742817-57742836 | None:intergenic | 45.0% | |
| GCCGAACTTAAAGAGAACCT+CGG | - | chr8.4:57746018-57746037 | MS.gene59966:intron | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | + | chr8.4:57746740-57746759 | None:intergenic | 45.0% | |
| GGATGAAGACGAGCTAGTAA+AGG | + | chr8.4:57745583-57745602 | None:intergenic | 45.0% | |
| GGGATGTCATGAGTGGTAAA+AGG | - | chr8.4:57745530-57745549 | MS.gene59966:intron | 45.0% | |
| GGGCAACCGAAATTCAGAAA+GGG | + | chr8.4:57743563-57743582 | None:intergenic | 45.0% | |
| GTTATTAGGGGCTGCTATAG+CGG | - | chr8.4:57743189-57743208 | MS.gene59966:CDS | 45.0% | |
| TACTAGCTCGTCTTCATCCT+GGG | - | chr8.4:57745584-57745603 | MS.gene59966:intron | 45.0% | |
| TCACGCAACAAGTGTTCTGA+TGG | - | chr8.4:57745736-57745755 | MS.gene59966:intron | 45.0% | |
| TCTCCATCACCACTGAAACA+GGG | + | chr8.4:57746144-57746163 | None:intergenic | 45.0% | |
| TCTGGGAAATCACCTTGCAA+CGG | + | chr8.4:57742732-57742751 | None:intergenic | 45.0% | |
| TGGTCAACACGTATGTGTGT+TGG | - | chr8.4:57745079-57745098 | MS.gene59966:intron | 45.0% | |
| TTACTAGCTCGTCTTCATCC+TGG | - | chr8.4:57745583-57745602 | MS.gene59966:intron | 45.0% | |
| TTGAGTTTCCCGCATAAACC+AGG | + | chr8.4:57745810-57745829 | None:intergenic | 45.0% | |
| ! | ATCAGAACACTTGTTGCGTG+AGG | + | chr8.4:57745737-57745756 | None:intergenic | 45.0% |
| ! | CACACACAAGAAGTGCATGA+GGG | + | chr8.4:57743612-57743631 | None:intergenic | 45.0% |
| ! | CCCTTAGATTTGGGGTTCTT+GGG | - | chr8.4:57743445-57743464 | MS.gene59966:CDS | 45.0% |
| ! | GGTTTGGAGTGTGTATAAGG+AGG | - | chr8.4:57744597-57744616 | MS.gene59966:intron | 45.0% |
| ! | TCCCTTAGATTTGGGGTTCT+TGG | - | chr8.4:57743444-57743463 | MS.gene59966:CDS | 45.0% |
| ! | TCTGTCTCTGAGAAACCAAG+TGG | - | chr8.4:57745700-57745719 | MS.gene59966:intron | 45.0% |
| !! | AAGTGCATGAGGGCATTACA+AGG | + | chr8.4:57743602-57743621 | None:intergenic | 45.0% |
| !! | CAAGCAGAGAGATGGTTTTG+AGG | + | chr8.4:57745611-57745630 | None:intergenic | 45.0% |
| !! | TGTGGAGGCATCATAATCTC+TGG | - | chr8.4:57743794-57743813 | MS.gene59966:CDS | 45.0% |
| !! | TTTCAGTGGTGATGGAGAGT+GGG | - | chr8.4:57746146-57746165 | MS.gene59966:intron | 45.0% |
| !!! | GGTGTGTTTTTTCTGTGGTG+CGG | - | chr8.4:57743419-57743438 | MS.gene59966:CDS | 45.0% |
| !!! | TGGGATTGGCTGTTGTTTTG+TGG | - | chr8.4:57743530-57743549 | MS.gene59966:CDS | 45.0% |
| AACACACCCAAATCGGTAGG+CGG | + | chr8.4:57743407-57743426 | None:intergenic | 50.0% | |
| AAGCTCTTTAGCAATGCCCC+TGG | + | chr8.4:57745413-57745432 | None:intergenic | 50.0% | |
| ACATGCAGCAGTAGGTGTGA+AGG | + | chr8.4:57745770-57745789 | None:intergenic | 50.0% | |
| ACCACCAGAGATAGGAACCA+TGG | + | chr8.4:57745878-57745897 | None:intergenic | 50.0% | |
| ACCACTCATGACATCCCACA+GGG | + | chr8.4:57745527-57745546 | None:intergenic | 50.0% | |
| AGTGCCATGGTTCCTATCTC+TGG | - | chr8.4:57745871-57745890 | MS.gene59966:intron | 50.0% | |
| ATCATCGGAGCACATGAGAG+AGG | + | chr8.4:57745640-57745659 | None:intergenic | 50.0% | |
| ATTGTGGTCGAATGACGCAG+TGG | - | chr8.4:57742998-57743017 | MS.gene59966:CDS | 50.0% | |
| CAACACCGTTTAGATCACCG+AGG | + | chr8.4:57746038-57746057 | None:intergenic | 50.0% | |
| CAATGGCGTTGTGATTGTGG+AGG | - | chr8.4:57743779-57743798 | MS.gene59966:CDS | 50.0% | |
| CAGCGGCCAATTAGCAAAGA+AGG | - | chr8.4:57744081-57744100 | MS.gene59966:intron | 50.0% | |
| CATGCACTTCTTGTGTGTGG+TGG | - | chr8.4:57743613-57743632 | MS.gene59966:CDS | 50.0% | |
| CATGCCTCAAGTCCAGTTGA+AGG | - | chr8.4:57746779-57746798 | MS.gene59966:intron | 50.0% | |
| CCTCATGCACTTCTTGTGTG+TGG | - | chr8.4:57743610-57743629 | MS.gene59966:CDS | 50.0% | |
| CGCCATTGCAGACTTGTCAA+TGG | + | chr8.4:57743767-57743786 | None:intergenic | 50.0% | |
| CTCTCCATCACCACTGAAAC+AGG | + | chr8.4:57746145-57746164 | None:intergenic | 50.0% | |
| CTGCAATGGCGTTGTGATTG+TGG | - | chr8.4:57743776-57743795 | MS.gene59966:CDS | 50.0% | |
| GAATCAGCTGGCTGCAATGA+TGG | - | chr8.4:57745361-57745380 | MS.gene59966:intron | 50.0% | |
| GCAGCCAAATAGCATAGCAG+AGG | - | chr8.4:57743224-57743243 | MS.gene59966:CDS | 50.0% | |
| GCCCAAGAACCCCAAATCTA+AGG | + | chr8.4:57743449-57743468 | None:intergenic | 50.0% | |
| GGGGCAACCGAAATTCAGAA+AGG | + | chr8.4:57743564-57743583 | None:intergenic | 50.0% | |
| GTGCGGTGTCCCTTAGATTT+GGG | - | chr8.4:57743436-57743455 | MS.gene59966:CDS | 50.0% | |
| GTTGAGAAGTTGAAGGCTGC+AGG | - | chr8.4:57746054-57746073 | MS.gene59966:intron | 50.0% | |
| TACCACTCATGACATCCCAC+AGG | + | chr8.4:57745528-57745547 | None:intergenic | 50.0% | |
| TAGTTAGACTCTGGGCAGAG+TGG | + | chr8.4:57744542-57744561 | None:intergenic | 50.0% | |
| TCGGAAGAAGTGGTAGCAAC+TGG | - | chr8.4:57746743-57746762 | MS.gene59966:intron | 50.0% | |
| TGACAAGTCGCTATCCCTGT+GGG | - | chr8.4:57745510-57745529 | MS.gene59966:intron | 50.0% | |
| TGCGGTGTCCCTTAGATTTG+GGG | - | chr8.4:57743437-57743456 | MS.gene59966:CDS | 50.0% | |
| TGTTCAGGTACATCGCGACA+GGG | + | chr8.4:57746659-57746678 | None:intergenic | 50.0% | |
| TTCTGCCAAATAGAGCAGCC+TGG | - | chr8.4:57743903-57743922 | MS.gene59966:CDS | 50.0% | |
| TTGTTCAGGTACATCGCGAC+AGG | + | chr8.4:57746660-57746679 | None:intergenic | 50.0% | |
| ! | AACACTTGTTGCGTGAGGCA+GGG | + | chr8.4:57745732-57745751 | None:intergenic | 50.0% |
| ! | AATCACGAAGGTGCACTGGA+AGG | - | chr8.4:57746116-57746135 | MS.gene59966:intron | 50.0% |
| ! | ATGCAATCACGAAGGTGCAC+TGG | - | chr8.4:57746112-57746131 | MS.gene59966:intron | 50.0% |
| ! | CCACACACAAGAAGTGCATG+AGG | + | chr8.4:57743613-57743632 | None:intergenic | 50.0% |
| ! | TGCACAGCGTTTTTGTGCAG+CGG | - | chr8.4:57744064-57744083 | MS.gene59966:intron | 50.0% |
| !! | ACTCTGGGCAGAGTGGATTA+GGG | + | chr8.4:57744535-57744554 | None:intergenic | 50.0% |
| !! | GTTTCAGTGGTGATGGAGAG+TGG | - | chr8.4:57746145-57746164 | MS.gene59966:intron | 50.0% |
| !! | TGAGAACCGCCTACCGATTT+GGG | - | chr8.4:57743398-57743417 | MS.gene59966:CDS | 50.0% |
| !!! | AGAGATGGTTTTGAGGACCC+AGG | + | chr8.4:57745604-57745623 | None:intergenic | 50.0% |
| AGATGGTGAGGTGAGTGCCA+TGG | - | chr8.4:57745858-57745877 | MS.gene59966:intron | 55.0% | |
| ATCCCATACCCTGGGTATCC+AGG | + | chr8.4:57744637-57744656 | None:intergenic | 55.0% | |
| ATGACGCAGTGGCGTTGCAA+TGG | - | chr8.4:57743009-57743028 | MS.gene59966:CDS | 55.0% | |
| CAAATCGGTAGGCGGTTCTC+AGG | + | chr8.4:57743399-57743418 | None:intergenic | 55.0% | |
| CAGCGACTCTGATATGTCCG+AGG | - | chr8.4:57746607-57746626 | MS.gene59966:CDS | 55.0% | |
| CTAGGTCTCCTGGATACCCA+GGG | - | chr8.4:57744626-57744645 | MS.gene59966:intron | 55.0% | |
| CTCCTGGATACCCAGGGTAT+GGG | - | chr8.4:57744632-57744651 | MS.gene59966:intron | 55.0% | |
| CTGACAAGTCGCTATCCCTG+TGG | - | chr8.4:57745509-57745528 | MS.gene59966:intron | 55.0% | |
| GAGGGAAAGTCTAGGTCTCC+TGG | - | chr8.4:57744616-57744635 | MS.gene59966:intron | 55.0% | |
| GCACCCTGTTTCAGTGGTGA+TGG | - | chr8.4:57746138-57746157 | MS.gene59966:intron | 55.0% | |
| GCCATGGTTCCTATCTCTGG+TGG | - | chr8.4:57745874-57745893 | MS.gene59966:intron | 55.0% | |
| GGATAGCGACTTGTCAGCAG+CGG | + | chr8.4:57745506-57745525 | None:intergenic | 55.0% | |
| GGTGCGGTGTCCCTTAGATT+TGG | - | chr8.4:57743435-57743454 | MS.gene59966:CDS | 55.0% | |
| TCCCTGTGGGATGTCATGAG+TGG | - | chr8.4:57745523-57745542 | MS.gene59966:intron | 55.0% | |
| TCTAGGTCTCCTGGATACCC+AGG | - | chr8.4:57744625-57744644 | MS.gene59966:intron | 55.0% | |
| TCTCCTGGATACCCAGGGTA+TGG | - | chr8.4:57744631-57744650 | MS.gene59966:intron | 55.0% | |
| TGCAGCAGTAGGTGTGAAGG+AGG | + | chr8.4:57745767-57745786 | None:intergenic | 55.0% | |
| TTGTTGCGTGAGGCAGGGTT+TGG | + | chr8.4:57745727-57745746 | None:intergenic | 55.0% | |
| ! | CTGAGAACCGCCTACCGATT+TGG | - | chr8.4:57743397-57743416 | MS.gene59966:CDS | 55.0% |
| ! | GAACACTTGTTGCGTGAGGC+AGG | + | chr8.4:57745733-57745752 | None:intergenic | 55.0% |
| ! | GACTCTGGGCAGAGTGGATT+AGG | + | chr8.4:57744536-57744555 | None:intergenic | 55.0% |
| !! | GATGGAGAGTGGGTTGTTGG+TGG | - | chr8.4:57746156-57746175 | MS.gene59966:intron | 55.0% |
| !! | GGTGATGGAGAGTGGGTTGT+TGG | - | chr8.4:57746153-57746172 | MS.gene59966:intron | 55.0% |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | - | chr8.4:57746132-57746151 | MS.gene59966:intron | 55.0% |
| ACATCGCGACAGGGAGATGC+TGG | + | chr8.4:57746650-57746669 | None:intergenic | 60.0% | |
| GGACACGCCAAGCAGAGAGA+TGG | + | chr8.4:57745619-57745638 | None:intergenic | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | + | chr8.4:57746245-57746264 | None:intergenic | 60.0% | |
| ! | GAGGCAGGGTTTGGTCCACT+TGG | + | chr8.4:57745718-57745737 | None:intergenic | 60.0% |
| CGTCGCGGTACCCTTCTTGC+TGG | - | chr8.4:57742804-57742823 | MS.gene59966:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 57742539 | 57746832 | 57742539 | ID=MS.gene59966 |
| chr8.4 | mRNA | 57742539 | 57746832 | 57742539 | ID=MS.gene59966.t1;Parent=MS.gene59966 |
| chr8.4 | exon | 57746814 | 57746832 | 57746814 | ID=MS.gene59966.t1.exon1;Parent=MS.gene59966.t1 |
| chr8.4 | CDS | 57746814 | 57746832 | 57746814 | ID=cds.MS.gene59966.t1;Parent=MS.gene59966.t1 |
| chr8.4 | exon | 57746546 | 57746644 | 57746546 | ID=MS.gene59966.t1.exon2;Parent=MS.gene59966.t1 |
| chr8.4 | CDS | 57746546 | 57746644 | 57746546 | ID=cds.MS.gene59966.t1;Parent=MS.gene59966.t1 |
| chr8.4 | exon | 57742916 | 57744003 | 57742916 | ID=MS.gene59966.t1.exon3;Parent=MS.gene59966.t1 |
| chr8.4 | CDS | 57742916 | 57744003 | 57742916 | ID=cds.MS.gene59966.t1;Parent=MS.gene59966.t1 |
| chr8.4 | exon | 57742539 | 57742832 | 57742539 | ID=MS.gene59966.t1.exon4;Parent=MS.gene59966.t1 |
| chr8.4 | CDS | 57742539 | 57742832 | 57742539 | ID=cds.MS.gene59966.t1;Parent=MS.gene59966.t1 |
| Gene Sequence |
| Protein sequence |
