Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60262.t1 | AES58965.2 | 96.9 | 647 | 20 | 0 | 1 | 647 | 1 | 647 | 0.00E+00 | 1256.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60262.t1 | Q9SUU1 | 65.6 | 666 | 200 | 4 | 3 | 647 | 7 | 664 | 5.1e-255 | 881.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60262.t1 | G7I6E0 | 96.9 | 647 | 20 | 0 | 1 | 647 | 1 | 647 | 0.0e+00 | 1256.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026799 | MS.gene60262 | PPI |
| MS.gene79489 | MS.gene60262 | PPI |
| MS.gene60262 | MS.gene89068 | PPI |
| MS.gene37317 | MS.gene60262 | PPI |
| MS.gene86346 | MS.gene60262 | PPI |
| MS.gene034033 | MS.gene60262 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60262.t1 | MTR_1g011840 | 96.909 | 647 | 20 | 0 | 1 | 647 | 1 | 647 | 0.0 | 1302 |
| MS.gene60262.t1 | MTR_3g107730 | 74.704 | 676 | 155 | 3 | 2 | 662 | 3 | 677 | 0.0 | 1027 |
| MS.gene60262.t1 | MTR_0459s0020 | 66.410 | 649 | 204 | 5 | 3 | 642 | 15 | 658 | 0.0 | 877 |
| MS.gene60262.t1 | MTR_3g107730 | 78.474 | 511 | 110 | 0 | 2 | 512 | 3 | 513 | 0.0 | 848 |
| MS.gene60262.t1 | MTR_0366s0020 | 59.409 | 643 | 175 | 4 | 3 | 642 | 15 | 574 | 0.0 | 748 |
| MS.gene60262.t1 | MTR_7g110000 | 55.758 | 660 | 271 | 4 | 3 | 648 | 7 | 659 | 0.0 | 726 |
| MS.gene60262.t1 | MTR_2g032690 | 54.025 | 646 | 278 | 4 | 3 | 636 | 7 | 645 | 0.0 | 710 |
| MS.gene60262.t1 | MTR_3g077670 | 55.710 | 648 | 267 | 5 | 3 | 636 | 7 | 648 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60262.t1 | AT1G15460 | 65.533 | 676 | 204 | 7 | 4 | 669 | 13 | 669 | 0.0 | 911 |
| MS.gene60262.t1 | AT1G15460 | 65.533 | 676 | 204 | 7 | 4 | 669 | 13 | 669 | 0.0 | 911 |
| MS.gene60262.t1 | AT4G32510 | 64.296 | 689 | 202 | 5 | 3 | 670 | 7 | 672 | 0.0 | 905 |
| MS.gene60262.t1 | AT4G32510 | 65.517 | 667 | 201 | 4 | 3 | 648 | 7 | 665 | 0.0 | 904 |
| MS.gene60262.t1 | AT5G25430 | 66.718 | 646 | 209 | 2 | 2 | 641 | 8 | 653 | 0.0 | 904 |
| MS.gene60262.t1 | AT1G74810 | 63.811 | 677 | 216 | 6 | 3 | 669 | 12 | 669 | 0.0 | 889 |
| MS.gene60262.t1 | AT1G74810 | 63.811 | 677 | 216 | 6 | 3 | 669 | 12 | 669 | 0.0 | 889 |
| MS.gene60262.t1 | AT1G74810 | 63.811 | 677 | 216 | 6 | 3 | 669 | 12 | 669 | 0.0 | 889 |
| MS.gene60262.t1 | AT1G15460 | 68.760 | 605 | 179 | 3 | 4 | 598 | 13 | 617 | 0.0 | 870 |
| MS.gene60262.t1 | AT1G74810 | 64.407 | 649 | 202 | 6 | 31 | 669 | 8 | 637 | 0.0 | 861 |
| MS.gene60262.t1 | AT1G74810 | 64.407 | 649 | 202 | 6 | 31 | 669 | 8 | 637 | 0.0 | 861 |
| MS.gene60262.t1 | AT1G15460 | 64.605 | 582 | 177 | 7 | 98 | 669 | 1 | 563 | 0.0 | 772 |
| MS.gene60262.t1 | AT1G74810 | 62.715 | 582 | 188 | 6 | 98 | 669 | 1 | 563 | 0.0 | 753 |
| MS.gene60262.t1 | AT3G62270 | 56.366 | 644 | 265 | 4 | 3 | 636 | 7 | 644 | 0.0 | 737 |
| MS.gene60262.t1 | AT2G47160 | 57.298 | 644 | 258 | 4 | 3 | 636 | 7 | 643 | 0.0 | 737 |
| MS.gene60262.t1 | AT2G47160 | 55.306 | 669 | 257 | 5 | 3 | 636 | 7 | 668 | 0.0 | 727 |
| MS.gene60262.t1 | AT1G74810 | 62.385 | 545 | 176 | 6 | 135 | 669 | 1 | 526 | 0.0 | 699 |
| MS.gene60262.t1 | AT3G06450 | 52.322 | 646 | 285 | 6 | 3 | 636 | 9 | 643 | 0.0 | 696 |
| MS.gene60262.t1 | AT3G06450 | 52.322 | 646 | 285 | 6 | 3 | 636 | 9 | 643 | 0.0 | 696 |
| MS.gene60262.t1 | AT3G06450 | 52.322 | 646 | 285 | 6 | 3 | 636 | 9 | 643 | 0.0 | 696 |
| MS.gene60262.t1 | AT3G06450 | 52.322 | 646 | 285 | 6 | 3 | 636 | 9 | 643 | 0.0 | 696 |
Find 149 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTCCCAGGGAATCAATTT+TGG | 0.152632 | 1.1:-8834957 | MS.gene60262:CDS |
| GCACTTCCTGTTATTGCTTT+TGG | 0.157279 | 1.1:-8837627 | MS.gene60262:CDS |
| TTATTATGATGCAGAGTTAT+TGG | 0.204927 | 1.1:-8834219 | MS.gene60262:CDS |
| GGAATTATCCACTCAATATT+TGG | 0.211492 | 1.1:-8837285 | MS.gene60262:CDS |
| TACTTACTTGTAGTGCCTTC+TGG | 0.214656 | 1.1:+8834906 | None:intergenic |
| GGATACCTACCTCCGTTCTT+TGG | 0.245672 | 1.1:-8835008 | MS.gene60262:CDS |
| TCGAGCTTCTACTATCATTT+TGG | 0.246718 | 1.1:+8834150 | None:intergenic |
| TCTTCGGTTATTCCTCTAAA+TGG | 0.254655 | 1.1:+8837750 | None:intergenic |
| CTTTGCTCATTAACTCTAAC+AGG | 0.255009 | 1.1:+8835096 | None:intergenic |
| ACTCTTATTTGCGGCATTCT+TGG | 0.263685 | 1.1:-8835812 | MS.gene60262:CDS |
| TACCCTTGCCATACATCTTT+GGG | 0.286144 | 1.1:-8836057 | MS.gene60262:CDS |
| CGATTATCACTAGGTTTACT+AGG | 0.288360 | 1.1:-8836879 | MS.gene60262:CDS |
| TCTGAATATGAGGAAATTAT+TGG | 0.289374 | 1.1:-8834496 | MS.gene60262:CDS |
| GTACCCTTGCCATACATCTT+TGG | 0.289747 | 1.1:-8836058 | MS.gene60262:CDS |
| GATACCTACCTCCGTTCTTT+GGG | 0.297206 | 1.1:-8835007 | MS.gene60262:CDS |
| AACAGCTTGGCACCTAATTC+TGG | 0.301971 | 1.1:+8837180 | None:intergenic |
| CTTGGTCTCCCTCCAGTAAA+TGG | 0.302633 | 1.1:-8835794 | MS.gene60262:CDS |
| CTGTACTGGTGTTAGAATAT+TGG | 0.303071 | 1.1:-8837679 | MS.gene60262:CDS |
| GTCCAGTGGTAGAGAGATTC+AGG | 0.305551 | 1.1:+8836180 | None:intergenic |
| TGGATGAGATGACAACTAAT+AGG | 0.313017 | 1.1:-8834199 | MS.gene60262:CDS |
| TAGGCATCTATATGTTTAAT+AGG | 0.315242 | 1.1:+8835123 | None:intergenic |
| AGGGTTGCAGAGGAATTATT+TGG | 0.316548 | 1.1:-8836859 | MS.gene60262:CDS |
| CGAGGTGTCATCGCAGATTA+TGG | 0.318939 | 1.1:-8836306 | MS.gene60262:CDS |
| CAATGAAGACAGACATATTC+AGG | 0.324753 | 1.1:-8834102 | MS.gene60262:intron |
| CATATCCCGGTAGATTCTTC+AGG | 0.332119 | 1.1:+8833889 | None:intergenic |
| TTTGTTCCAGGGTTTGTGTT+TGG | 0.335131 | 1.1:-8836945 | MS.gene60262:intron |
| GGATGAGATGACAACTAATA+GGG | 0.335188 | 1.1:-8834198 | MS.gene60262:CDS |
| ACTTACTTGTAGTGCCTTCT+GGG | 0.339945 | 1.1:+8834907 | None:intergenic |
| TTAGCTATGGGACCATTTAG+AGG | 0.350397 | 1.1:-8837762 | None:intergenic |
| TGCTCTCCAAAAGCAATAAC+AGG | 0.357844 | 1.1:+8837621 | None:intergenic |
| CAAAGAATATGTAGAAAGTT+GGG | 0.360953 | 1.1:+8837655 | None:intergenic |
| TTCCTTCTGTTGAGCCATCT+TGG | 0.365186 | 1.1:+8835976 | None:intergenic |
| ATTAACTCTAACAGGCAAAT+AGG | 0.368905 | 1.1:+8835104 | None:intergenic |
| TAAGTAGAAGTGCAAGAAAA+TGG | 0.370034 | 1.1:-8836565 | MS.gene60262:CDS |
| GGTTGCTTTGTCCACTTCCT+TGG | 0.370070 | 1.1:-8836206 | MS.gene60262:CDS |
| TTCCAACTGGTGTTCCTAGA+AGG | 0.374788 | 1.1:-8836227 | MS.gene60262:CDS |
| AATCGTAGTAGCTTAACTTA+TGG | 0.376260 | 1.1:-8834128 | MS.gene60262:CDS |
| CACTCTTCACCACCTTCCTT+CGG | 0.378699 | 1.1:+8835391 | None:intergenic |
| GTTGCTTTGTCCACTTCCTT+GGG | 0.379269 | 1.1:-8836205 | MS.gene60262:CDS |
| GGAAGCAACTCTGAATTATA+CGG | 0.384602 | 1.1:-8835345 | MS.gene60262:CDS |
| GCGAGCCGTGTTTATAGAAA+TGG | 0.386586 | 1.1:-8835316 | MS.gene60262:CDS |
| GAGCAACTTAATAGAGAAAC+AGG | 0.387278 | 1.1:-8837603 | MS.gene60262:intron |
| AGAAAATGGCGATATTTAAC+AGG | 0.388372 | 1.1:-8836551 | MS.gene60262:intron |
| TGAGGAAGGACTCCATTTAC+TGG | 0.394428 | 1.1:+8835782 | None:intergenic |
| ACCATTAGTGGTATATTATG+TGG | 0.395408 | 1.1:+8834469 | None:intergenic |
| TAAAGAGTTGGAGACTTTGA+AGG | 0.396140 | 1.1:-8835196 | MS.gene60262:CDS |
| AGAGTTTAGCGACTCTTAGA+AGG | 0.397727 | 1.1:-8835742 | MS.gene60262:CDS |
| AAGTCTTCCTTTGAAATCTT+CGG | 0.398151 | 1.1:+8837734 | None:intergenic |
| TAGAGGAATATAAATTTCAT+TGG | 0.405736 | 1.1:-8836649 | MS.gene60262:CDS |
| CTACCACTGGACTGTAGTTA+AGG | 0.410424 | 1.1:-8836169 | MS.gene60262:intron |
| TTTCATTGGCGCTATACAAA+TGG | 0.416111 | 1.1:-8836635 | MS.gene60262:CDS |
| CTTTCCCAAAATTGATTCCC+TGG | 0.417341 | 1.1:+8834952 | None:intergenic |
| GCAAAGAATATGTAGAAAGT+TGG | 0.420315 | 1.1:+8837654 | None:intergenic |
| AGTGGACAAAGCAACCTTCT+AGG | 0.424170 | 1.1:+8836213 | None:intergenic |
| TTTCATTCAACAGGCTATAG+AGG | 0.424803 | 1.1:-8836818 | MS.gene60262:intron |
| GGATTGACACGGATACCTAT+TGG | 0.428993 | 1.1:-8834619 | MS.gene60262:CDS |
| GGCTGAAAATCCCTTGTTAG+AGG | 0.430093 | 1.1:-8836666 | MS.gene60262:CDS |
| GGAAACAATATTCCACCAAT+AGG | 0.432037 | 1.1:+8834604 | None:intergenic |
| ATTCTTTAGACTCTTATTTG+CGG | 0.433984 | 1.1:-8835821 | MS.gene60262:intron |
| TCCACATAATATACCACTAA+TGG | 0.440446 | 1.1:-8834470 | MS.gene60262:intron |
| ATTAGATGCTTCTGAATATG+AGG | 0.443445 | 1.1:-8834506 | MS.gene60262:CDS |
| ATGGCAATTGATAGTCTCCC+AGG | 0.464102 | 1.1:-8834970 | MS.gene60262:CDS |
| TAGCCGTTCCTGTCATCAAA+AGG | 0.464519 | 1.1:-8835029 | MS.gene60262:CDS |
| GTCCAACATACTACCATCAT+TGG | 0.465983 | 1.1:+8836279 | None:intergenic |
| ATGAGAAGGAAGAAAGGTAA+TGG | 0.468317 | 1.1:+8834583 | None:intergenic |
| CTAAACTCTTAGTATGCATA+GGG | 0.468592 | 1.1:+8835756 | None:intergenic |
| GGTCAACCTTTGTTGATTGT+AGG | 0.469219 | 1.1:-8837261 | MS.gene60262:CDS |
| TCGGTATCTTGAACTCACTT+AGG | 0.471906 | 1.1:+8836690 | None:intergenic |
| ATTCCAGCAGTTATGATAGC+AGG | 0.473402 | 1.1:-8836028 | MS.gene60262:CDS |
| AGTTGGAACTTTGCTCGGTA+TGG | 0.479406 | 1.1:+8836242 | None:intergenic |
| TTGGTCTTAGGTTAAAGAGT+TGG | 0.495813 | 1.1:-8835208 | MS.gene60262:intron |
| TGGATTTGTGCAATCTGTAC+TGG | 0.499427 | 1.1:-8837693 | MS.gene60262:CDS |
| GAAGAATCTACCGGGATATG+AGG | 0.501335 | 1.1:-8833886 | None:intergenic |
| AAACCTGCTATCATAACTGC+TGG | 0.501635 | 1.1:+8836025 | None:intergenic |
| TTTCCCAAAATTGATTCCCT+GGG | 0.509771 | 1.1:+8834953 | None:intergenic |
| TAAGAGAGAGATTGCTTCCA+AGG | 0.511158 | 1.1:-8834555 | MS.gene60262:CDS |
| ATAAATGCCCCAAAGATGTA+TGG | 0.511521 | 1.1:+8836049 | None:intergenic |
| TGACTGCAACTGCAGGATAT+GGG | 0.516594 | 1.1:-8836085 | MS.gene60262:intron |
| AGATTATGGTGTTCCAATGA+TGG | 0.517455 | 1.1:-8836292 | MS.gene60262:CDS |
| AGAGTGCGAAGGAATGCATT+AGG | 0.517771 | 1.1:-8835374 | MS.gene60262:CDS |
| TTTAGCGACTCTTAGAAGGC+AGG | 0.520700 | 1.1:-8835738 | MS.gene60262:intron |
| TTGACATCCACGGCTATATG+TGG | 0.527616 | 1.1:-8837306 | MS.gene60262:CDS |
| AAATTTATATTCCTCTAACA+AGG | 0.528470 | 1.1:+8836655 | None:intergenic |
| GATTCAGGTTCCCAAGGAAG+TGG | 0.531361 | 1.1:+8836195 | None:intergenic |
| CTAAAAGTGATAAGGCGATA+AGG | 0.531741 | 1.1:+8835049 | None:intergenic |
| ATATCCCGGTAGATTCTTCA+GGG | 0.532773 | 1.1:+8833890 | None:intergenic |
| CTTACTTGTAGTGCCTTCTG+GGG | 0.534232 | 1.1:+8834908 | None:intergenic |
| AACCTGAATCTCTCTACCAC+TGG | 0.534784 | 1.1:-8836182 | MS.gene60262:CDS |
| ATACCGAGCAAAGTTCCAAC+TGG | 0.538542 | 1.1:-8836240 | MS.gene60262:CDS |
| GTTTACCCTGAAGAATCTAC+CGG | 0.545419 | 1.1:-8833895 | MS.gene60262:CDS |
| GAAATTTACAGTTGATCCGA+AGG | 0.547190 | 1.1:-8835407 | MS.gene60262:intron |
| ACACCAGTTGGAACTTTGCT+CGG | 0.549532 | 1.1:+8836237 | None:intergenic |
| CAATCTGTTATGGATTGACA+CGG | 0.550652 | 1.1:-8834630 | MS.gene60262:CDS |
| AATTTATATTCCTCTAACAA+GGG | 0.556470 | 1.1:+8836656 | None:intergenic |
| TTTACAGTTGATCCGAAGGA+AGG | 0.560146 | 1.1:-8835403 | MS.gene60262:intron |
| GATTATCACTAGGTTTACTA+GGG | 0.562886 | 1.1:-8836878 | MS.gene60262:CDS |
| AGGAACGGCTAAAAGTGATA+AGG | 0.563689 | 1.1:+8835041 | None:intergenic |
| ATGCATGTTCGATTATCACT+AGG | 0.567007 | 1.1:-8836888 | MS.gene60262:CDS |
| GCTAAACTCTTAGTATGCAT+AGG | 0.567941 | 1.1:+8835755 | None:intergenic |
| TTCCAATGATGGTAGTATGT+TGG | 0.573433 | 1.1:-8836281 | MS.gene60262:CDS |
| ATAGCTATGAGAAGGAAGAA+AGG | 0.575155 | 1.1:+8834577 | None:intergenic |
| TAGTTTGCATCGAATAACCT+TGG | 0.577666 | 1.1:+8834538 | None:intergenic |
| TTCCAAGATGGCTCAACAGA+AGG | 0.577993 | 1.1:-8835978 | MS.gene60262:CDS |
| TATGCATAGGGGACTGAGGA+AGG | 0.581537 | 1.1:+8835768 | None:intergenic |
| TGCCCCAAAGATGTATGGCA+AGG | 0.582072 | 1.1:+8836054 | None:intergenic |
| ACATCATAGTGGTAAGCAGA+TGG | 0.586567 | 1.1:+8835938 | None:intergenic |
| GAGACTACCTCCTCATATCC+CGG | 0.588192 | 1.1:+8833876 | None:intergenic |
| TAGAGAGATTCAGGTTCCCA+AGG | 0.590686 | 1.1:+8836189 | None:intergenic |
| ACCCTTGCCATACATCTTTG+GGG | 0.593909 | 1.1:-8836056 | MS.gene60262:CDS |
| GGCATCCATTTCTATAAACA+CGG | 0.597444 | 1.1:+8835311 | None:intergenic |
| AGCAAAATATCCCCAAAGAA+CGG | 0.599664 | 1.1:+8834996 | None:intergenic |
| ATACCTACCTCCGTTCTTTG+GGG | 0.600323 | 1.1:-8835006 | MS.gene60262:CDS |
| GGAATAACCGAAGATTTCAA+AGG | 0.600913 | 1.1:-8837741 | MS.gene60262:CDS |
| AAAGAATATGTAGAAAGTTG+GGG | 0.602432 | 1.1:+8837656 | None:intergenic |
| ATTATCCACTCAATATTTGG+TGG | 0.603688 | 1.1:-8837282 | MS.gene60262:CDS |
| GCCCCAAAGATGTATGGCAA+GGG | 0.606508 | 1.1:+8836055 | None:intergenic |
| TAGGTTTACTAGGGTTGCAG+AGG | 0.607582 | 1.1:-8836869 | MS.gene60262:CDS |
| GAAGGTGGTGAAGAGTGCGA+AGG | 0.614475 | 1.1:-8835385 | MS.gene60262:CDS |
| ACAGTTGATCCGAAGGAAGG+TGG | 0.614712 | 1.1:-8835400 | MS.gene60262:intron |
| ATGGTGTACATGATAACAGT+TGG | 0.615199 | 1.1:+8837228 | None:intergenic |
| TTGACACGGATACCTATTGG+TGG | 0.616417 | 1.1:-8834616 | MS.gene60262:CDS |
| TCTTGCACTTCTACTTACCA+TGG | 0.616641 | 1.1:+8836571 | None:intergenic |
| TATCCCCAAAGAACGGAGGT+AGG | 0.621214 | 1.1:+8835003 | None:intergenic |
| TCTCTCTTATAGCTATGAGA+AGG | 0.622750 | 1.1:+8834569 | None:intergenic |
| GTTGACCACCAAATATTGAG+TGG | 0.625187 | 1.1:+8837277 | None:intergenic |
| AATGTAGCTATTGTCTTGTG+TGG | 0.627927 | 1.1:+8834679 | None:intergenic |
| GAAGGACTCCATTTACTGGA+GGG | 0.628004 | 1.1:+8835786 | None:intergenic |
| TTACTTGTAGTGCCTTCTGG+GGG | 0.629233 | 1.1:+8834909 | None:intergenic |
| ATTCAATCAGGGTGCATACG+AGG | 0.629254 | 1.1:-8836324 | MS.gene60262:intron |
| TGGCAATTGATAGTCTCCCA+GGG | 0.629445 | 1.1:-8834969 | MS.gene60262:CDS |
| TCATAGCGTAGCTTCCAAGA+TGG | 0.632289 | 1.1:-8835990 | MS.gene60262:CDS |
| AGAGTTGGAGACTTTGAAGG+AGG | 0.633076 | 1.1:-8835193 | MS.gene60262:CDS |
| GATGAGATGACAACTAATAG+GGG | 0.637701 | 1.1:-8834197 | MS.gene60262:CDS |
| AAGGAATGCATTAGGCAACA+AGG | 0.639810 | 1.1:-8835366 | MS.gene60262:CDS |
| AACCTTCTAGGAACACCAGT+TGG | 0.641372 | 1.1:+8836225 | None:intergenic |
| TGGTACTGACTCTACAAATG+AGG | 0.649995 | 1.1:+8834699 | None:intergenic |
| GATAATTCCACATATAGCCG+TGG | 0.652655 | 1.1:+8837299 | None:intergenic |
| GCAACTGCAGGATATGGGAA+AGG | 0.654624 | 1.1:-8836080 | MS.gene60262:intron |
| TTAGTATGCATAGGGGACTG+AGG | 0.656982 | 1.1:+8835764 | None:intergenic |
| AGTTGAAACATTGACATCCA+CGG | 0.658572 | 1.1:-8837316 | MS.gene60262:CDS |
| AAGTGAGTTCAAGATACCGA+AGG | 0.667136 | 1.1:-8836687 | MS.gene60262:CDS |
| AACAATACTTACGGTAGGCG+CGG | 0.669012 | 1.1:+8835290 | None:intergenic |
| GCAACTCCTACAATCAACAA+AGG | 0.672535 | 1.1:+8837255 | None:intergenic |
| GGAAGGACTCCATTTACTGG+AGG | 0.678944 | 1.1:+8835785 | None:intergenic |
| TTTACCCTGAAGAATCTACC+GGG | 0.685166 | 1.1:-8833894 | MS.gene60262:CDS |
| AGCCTGTTGAATGAAAAGAA+CGG | 0.705325 | 1.1:+8836825 | None:intergenic |
| AAAATATCCCCAAAGAACGG+AGG | 0.705867 | 1.1:+8834999 | None:intergenic |
| GTACCTTAACTACAGTCCAG+TGG | 0.707187 | 1.1:+8836166 | None:intergenic |
| TAAACTCTTAGTATGCATAG+GGG | 0.760737 | 1.1:+8835757 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCAAATATTTATGTTATT+TGG | - | chr1.1:8834098-8834117 | MS.gene60262:intron | 10.0% |
| !!! | ATTTTAGAATTAGTTATAAT+TGG | + | chr1.1:8837617-8837636 | None:intergenic | 10.0% |
| !!! | TTCTAGTTTATATAAAAAAT+GGG | + | chr1.1:8836028-8836047 | None:intergenic | 10.0% |
| !! | ATGAAAACTAATGAAAAAAA+TGG | - | chr1.1:8836479-8836498 | MS.gene60262:intron | 15.0% |
| !! | GATTATTAATTCTACAAATA+TGG | + | chr1.1:8836844-8836863 | None:intergenic | 15.0% |
| !!! | AACTCTTTATTTTATGTTTA+TGG | - | chr1.1:8837711-8837730 | MS.gene60262:CDS | 15.0% |
| !!! | ATTTTGAAACTATATTTGAA+AGG | + | chr1.1:8834080-8834099 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTATTTGGTCTT+AGG | - | chr1.1:8836424-8836443 | MS.gene60262:intron | 15.0% |
| !!! | CTTCTAGTTTATATAAAAAA+TGG | + | chr1.1:8836029-8836048 | None:intergenic | 15.0% |
| !!! | TAGAATTTTATCAGATTTAT+AGG | + | chr1.1:8837244-8837263 | None:intergenic | 15.0% |
| !!! | TATCATATAAGTTATTTCTA+TGG | - | chr1.1:8834577-8834596 | MS.gene60262:CDS | 15.0% |
| !!! | TTATATATATACATGCTTTT+AGG | + | chr1.1:8837326-8837345 | None:intergenic | 15.0% |
| !!! | TTGAATTTTATAAACAAGAT+TGG | - | chr1.1:8833931-8833950 | MS.gene60262:intron | 15.0% |
| !! | AAATTTATATTCCTCTAACA+AGG | + | chr1.1:8834992-8835011 | None:intergenic | 20.0% |
| !! | AACATACTGAAATTGATAAA+TGG | + | chr1.1:8837214-8837233 | None:intergenic | 20.0% |
| !! | AATTGTGAAGTTAAAATACT+AGG | + | chr1.1:8834915-8834934 | None:intergenic | 20.0% |
| !! | AATTTATATTCCTCTAACAA+GGG | + | chr1.1:8834991-8835010 | None:intergenic | 20.0% |
| !! | AGTAGTAAATATTTAGACTT+CGG | + | chr1.1:8835128-8835147 | None:intergenic | 20.0% |
| !! | ATTAAACTCTTTGATCTATA+AGG | - | chr1.1:8834264-8834283 | MS.gene60262:CDS | 20.0% |
| !! | ATTAATTCTACAAATATGGA+AGG | + | chr1.1:8836840-8836859 | None:intergenic | 20.0% |
| !! | CAAATAAAAAAACTCTTTCA+AGG | - | chr1.1:8837572-8837591 | MS.gene60262:intron | 20.0% |
| !! | TAAAAAAACATTGACATTGT+AGG | + | chr1.1:8835191-8835210 | None:intergenic | 20.0% |
| !! | TAATAAAAAATGTTCACCAT+TGG | + | chr1.1:8836415-8836434 | None:intergenic | 20.0% |
| !! | TAGAGGAATATAAATTTCAT+TGG | - | chr1.1:8834995-8835014 | MS.gene60262:CDS | 20.0% |
| !! | TTAAACTCTTTGATCTATAA+GGG | - | chr1.1:8834265-8834284 | MS.gene60262:CDS | 20.0% |
| !!! | AAACTATATTTGAAAGGTTT+TGG | + | chr1.1:8834074-8834093 | None:intergenic | 20.0% |
| !!! | ATGCTAATGTTTAACTTTTA+TGG | - | chr1.1:8834671-8834690 | MS.gene60262:CDS | 20.0% |
| !!! | CTTTTTTTTTGTTAAACCTA+AGG | + | chr1.1:8837279-8837298 | None:intergenic | 20.0% |
| !!! | GAATTGATACTTTAGAATTA+AGG | + | chr1.1:8836193-8836212 | None:intergenic | 20.0% |
| !!! | GGTGAACATTTTTTATTATT+TGG | - | chr1.1:8836417-8836436 | MS.gene60262:intron | 20.0% |
| !!! | TAAGCTTTTTTATCCAAATA+GGG | + | chr1.1:8835951-8835970 | None:intergenic | 20.0% |
| !!! | TATTTATGTTATTTGGTCTA+TGG | - | chr1.1:8834105-8834124 | MS.gene60262:CDS | 20.0% |
| !!! | TGATAAAATTTTACCATTAG+TGG | + | chr1.1:8837190-8837209 | None:intergenic | 20.0% |
| !!! | TTAAGCTTTTTTATCCAAAT+AGG | + | chr1.1:8835952-8835971 | None:intergenic | 20.0% |
| !!! | TTTATTTTATGTTTATGGCT+TGG | - | chr1.1:8837716-8837735 | MS.gene60262:CDS | 20.0% |
| ! | AAACATTAGCATTACACTTT+GGG | + | chr1.1:8834663-8834682 | None:intergenic | 25.0% |
| ! | AAAGAATATGTAGAAAGTTG+GGG | + | chr1.1:8833991-8834010 | None:intergenic | 25.0% |
| ! | AAATTTGTGGACAAATAATG+CGG | + | chr1.1:8835218-8835237 | None:intergenic | 25.0% |
| ! | ATCAAAAGGATATACATGTT+AGG | + | chr1.1:8835805-8835824 | None:intergenic | 25.0% |
| ! | CAAAGAATATGTAGAAAGTT+GGG | + | chr1.1:8833992-8834011 | None:intergenic | 25.0% |
| ! | TAAACATTAGCATTACACTT+TGG | + | chr1.1:8834664-8834683 | None:intergenic | 25.0% |
| ! | TAAGAGTCTAAAGAATCAAA+AGG | + | chr1.1:8835819-8835838 | None:intergenic | 25.0% |
| ! | TAGGCATCTATATGTTTAAT+AGG | + | chr1.1:8836524-8836543 | None:intergenic | 25.0% |
| ! | TCTGAATATGAGGAAATTAT+TGG | - | chr1.1:8837148-8837167 | MS.gene60262:intron | 25.0% |
| ! | TTATTATGATGCAGAGTTAT+TGG | - | chr1.1:8837425-8837444 | MS.gene60262:intron | 25.0% |
| ! | TTTCTTGAAAATGTTTGATC+AGG | - | chr1.1:8837356-8837375 | MS.gene60262:intron | 25.0% |
| !! | AATTTACTTTCCATTTTGCT+AGG | + | chr1.1:8834884-8834903 | None:intergenic | 25.0% |
| !! | ACATGAAAACATTGATTGTA+TGG | + | chr1.1:8835270-8835289 | None:intergenic | 25.0% |
| !! | ACATTGATTGAAGAAATTTG+TGG | + | chr1.1:8835231-8835250 | None:intergenic | 25.0% |
| !! | ATTCTTTAGACTCTTATTTG+CGG | - | chr1.1:8835823-8835842 | MS.gene60262:intron | 25.0% |
| !! | CTATATTTTGCAATCTGTTA+TGG | - | chr1.1:8837004-8837023 | MS.gene60262:intron | 25.0% |
| !! | TGTTTTTCTTCTTGGAATAA+TGG | - | chr1.1:8835726-8835745 | MS.gene60262:intron | 25.0% |
| !! | TTGCAATCATTTTCTCTTTT+GGG | - | chr1.1:8835037-8835056 | MS.gene60262:CDS | 25.0% |
| !!! | AATGACTTTAGATGGATTTT+AGG | + | chr1.1:8835540-8835559 | None:intergenic | 25.0% |
| !!! | CACAATTGTTTTGATCAATA+GGG | - | chr1.1:8834928-8834947 | MS.gene60262:CDS | 25.0% |
| !!! | CATTTTCAAGAAATAAGTGA+AGG | + | chr1.1:8837349-8837368 | None:intergenic | 25.0% |
| !!! | TCACAATTGTTTTGATCAAT+AGG | - | chr1.1:8834927-8834946 | MS.gene60262:CDS | 25.0% |
| AAGCTATACTAAAGAGCTTA+TGG | - | chr1.1:8836059-8836078 | MS.gene60262:CDS | 30.0% | |
| AATCGTAGTAGCTTAACTTA+TGG | - | chr1.1:8837516-8837535 | MS.gene60262:intron | 30.0% | |
| ACCATTAGTGGTATATTATG+TGG | + | chr1.1:8837178-8837197 | None:intergenic | 30.0% | |
| AGAAAATGGCGATATTTAAC+AGG | - | chr1.1:8835093-8835112 | MS.gene60262:CDS | 30.0% | |
| AGACAATATGAGAGAACTTA+AGG | + | chr1.1:8836133-8836152 | None:intergenic | 30.0% | |
| ATTAACTCTAACAGGCAAAT+AGG | + | chr1.1:8836543-8836562 | None:intergenic | 30.0% | |
| ATTAGATGCTTCTGAATATG+AGG | - | chr1.1:8837138-8837157 | MS.gene60262:intron | 30.0% | |
| ATTATCCACTCAATATTTGG+TGG | - | chr1.1:8834362-8834381 | MS.gene60262:intron | 30.0% | |
| CAAGAAGAAAAACATCATAG+TGG | + | chr1.1:8835720-8835739 | None:intergenic | 30.0% | |
| CTAAACTCTTAGTATGCATA+GGG | + | chr1.1:8835891-8835910 | None:intergenic | 30.0% | |
| GATAGATAACTTGATGTTTG+TGG | - | chr1.1:8836791-8836810 | MS.gene60262:intron | 30.0% | |
| GATTATCACTAGGTTTACTA+GGG | - | chr1.1:8834766-8834785 | MS.gene60262:intron | 30.0% | |
| GCAAAGAATATGTAGAAAGT+TGG | + | chr1.1:8833993-8834012 | None:intergenic | 30.0% | |
| GGAATTATCCACTCAATATT+TGG | - | chr1.1:8834359-8834378 | MS.gene60262:intron | 30.0% | |
| TAAACTCTTAGTATGCATAG+GGG | + | chr1.1:8835890-8835909 | None:intergenic | 30.0% | |
| TCCACATAATATACCACTAA+TGG | - | chr1.1:8837174-8837193 | MS.gene60262:CDS | 30.0% | |
| TCGCAAATACTTCATATGAT+TGG | - | chr1.1:8834185-8834204 | MS.gene60262:CDS | 30.0% | |
| TGTGCAAAAACTGTATAGAA+TGG | + | chr1.1:8834438-8834457 | None:intergenic | 30.0% | |
| TTAACCTTCTAACTATACTG+AGG | - | chr1.1:8834522-8834541 | MS.gene60262:CDS | 30.0% | |
| TTATGGTCATATTTGTTCCA+GGG | - | chr1.1:8834688-8834707 | MS.gene60262:CDS | 30.0% | |
| TTTATGGTCATATTTGTTCC+AGG | - | chr1.1:8834687-8834706 | MS.gene60262:CDS | 30.0% | |
| ! | CACTATGATGTTTTTCTTCT+TGG | - | chr1.1:8835718-8835737 | MS.gene60262:intron | 30.0% |
| ! | CTTGCAATCATTTTCTCTTT+TGG | - | chr1.1:8835036-8835055 | MS.gene60262:CDS | 30.0% |
| ! | TAAGTAGAAGTGCAAGAAAA+TGG | - | chr1.1:8835079-8835098 | MS.gene60262:CDS | 30.0% |
| ! | TTGGGGATATTTTGCTTATA+TGG | - | chr1.1:8836655-8836674 | MS.gene60262:CDS | 30.0% |
| !! | AAGTCTTCCTTTGAAATCTT+CGG | + | chr1.1:8833913-8833932 | None:intergenic | 30.0% |
| !! | ATTTAGCACTGACATTGTTA+TGG | - | chr1.1:8834232-8834251 | MS.gene60262:CDS | 30.0% |
| !!! | TCTACTCATTTTTAGTCCTT+AGG | - | chr1.1:8837260-8837279 | MS.gene60262:CDS | 30.0% |
| AACTATACTGAGGTTCTGTT+TGG | - | chr1.1:8834532-8834551 | MS.gene60262:CDS | 35.0% | |
| AATGTAGCTATTGTCTTGTG+TGG | + | chr1.1:8836968-8836987 | None:intergenic | 35.0% | |
| AGAACCTCAGTATAGTTAGA+AGG | + | chr1.1:8834529-8834548 | None:intergenic | 35.0% | |
| AGATTATGGTGTTCCAATGA+TGG | - | chr1.1:8835352-8835371 | MS.gene60262:CDS | 35.0% | |
| AGCAAAATATCCCCAAAGAA+CGG | + | chr1.1:8836651-8836670 | None:intergenic | 35.0% | |
| AGCCTGTTGAATGAAAAGAA+CGG | + | chr1.1:8834822-8834841 | None:intergenic | 35.0% | |
| AGTTGAAACATTGACATCCA+CGG | - | chr1.1:8834328-8834347 | MS.gene60262:intron | 35.0% | |
| ATAAATGCCCCAAAGATGTA+TGG | + | chr1.1:8835598-8835617 | None:intergenic | 35.0% | |
| ATAGCTATGAGAAGGAAGAA+AGG | + | chr1.1:8837070-8837089 | None:intergenic | 35.0% | |
| ATGAGAAGGAAGAAAGGTAA+TGG | + | chr1.1:8837064-8837083 | None:intergenic | 35.0% | |
| ATGAGAGAACTTAAGGAAAG+TGG | + | chr1.1:8836126-8836145 | None:intergenic | 35.0% | |
| ATGCATGTTCGATTATCACT+AGG | - | chr1.1:8834756-8834775 | MS.gene60262:intron | 35.0% | |
| ATGGTGTACATGATAACAGT+TGG | + | chr1.1:8834419-8834438 | None:intergenic | 35.0% | |
| CAATGAAGACAGACATATTC+AGG | - | chr1.1:8837542-8837561 | MS.gene60262:intron | 35.0% | |
| CGATTATCACTAGGTTTACT+AGG | - | chr1.1:8834765-8834784 | MS.gene60262:intron | 35.0% | |
| CTAAAAGTGATAAGGCGATA+AGG | + | chr1.1:8836598-8836617 | None:intergenic | 35.0% | |
| CTTTGCTCATTAACTCTAAC+AGG | + | chr1.1:8836551-8836570 | None:intergenic | 35.0% | |
| GAAATTTACAGTTGATCCGA+AGG | - | chr1.1:8836237-8836256 | MS.gene60262:CDS | 35.0% | |
| GAGCAACTTAATAGAGAAAC+AGG | - | chr1.1:8834041-8834060 | MS.gene60262:intron | 35.0% | |
| GATGAGATGACAACTAATAG+GGG | - | chr1.1:8837447-8837466 | MS.gene60262:intron | 35.0% | |
| GCTAAACTCTTAGTATGCAT+AGG | + | chr1.1:8835892-8835911 | None:intergenic | 35.0% | |
| GGAAACAATATTCCACCAAT+AGG | + | chr1.1:8837043-8837062 | None:intergenic | 35.0% | |
| GGAAGCAACTCTGAATTATA+CGG | - | chr1.1:8836299-8836318 | MS.gene60262:CDS | 35.0% | |
| GGAATAACCGAAGATTTCAA+AGG | - | chr1.1:8833903-8833922 | MS.gene60262:intron | 35.0% | |
| GGATGAGATGACAACTAATA+GGG | - | chr1.1:8837446-8837465 | MS.gene60262:intron | 35.0% | |
| GGCATCCATTTCTATAAACA+CGG | + | chr1.1:8836336-8836355 | None:intergenic | 35.0% | |
| GTGTACTTGAGTTTATCTAC+CGG | + | chr1.1:8836171-8836190 | None:intergenic | 35.0% | |
| TAAAGAGTTGGAGACTTTGA+AGG | - | chr1.1:8836448-8836467 | MS.gene60262:intron | 35.0% | |
| TCTCTCTTATAGCTATGAGA+AGG | + | chr1.1:8837078-8837097 | None:intergenic | 35.0% | |
| TCTTCGGTTATTCCTCTAAA+TGG | + | chr1.1:8833897-8833916 | None:intergenic | 35.0% | |
| TGCACAAAAAGACCAGAATT+AGG | - | chr1.1:8834452-8834471 | MS.gene60262:intron | 35.0% | |
| TGGATGAGATGACAACTAAT+AGG | - | chr1.1:8837445-8837464 | MS.gene60262:intron | 35.0% | |
| TGTACTTGAGTTTATCTACC+GGG | + | chr1.1:8836170-8836189 | None:intergenic | 35.0% | |
| TGTCAAGCCAACAATACTTA+CGG | + | chr1.1:8836366-8836385 | None:intergenic | 35.0% | |
| TTCCAATGATGGTAGTATGT+TGG | - | chr1.1:8835363-8835382 | MS.gene60262:CDS | 35.0% | |
| TTGCAGTCAATGACTTTAGA+TGG | + | chr1.1:8835548-8835567 | None:intergenic | 35.0% | |
| TTTCATTCAACAGGCTATAG+AGG | - | chr1.1:8834826-8834845 | MS.gene60262:intron | 35.0% | |
| TTTCATTGGCGCTATACAAA+TGG | - | chr1.1:8835009-8835028 | MS.gene60262:CDS | 35.0% | |
| ! | AGGCTATAGAGGTATAGATA+TGG | - | chr1.1:8834837-8834856 | MS.gene60262:intron | 35.0% |
| ! | CAATCTGTTATGGATTGACA+CGG | - | chr1.1:8837014-8837033 | MS.gene60262:intron | 35.0% |
| ! | CTGTACTGGTGTTAGAATAT+TGG | - | chr1.1:8833965-8833984 | MS.gene60262:intron | 35.0% |
| ! | TACCGTTCTTTTCATTCAAC+AGG | - | chr1.1:8834817-8834836 | MS.gene60262:intron | 35.0% |
| ! | TAGTTTGCATCGAATAACCT+TGG | + | chr1.1:8837109-8837128 | None:intergenic | 35.0% |
| ! | TCGAGCTTCTACTATCATTT+TGG | + | chr1.1:8837497-8837516 | None:intergenic | 35.0% |
| ! | TTTATGGCTTGGACTTGTAT+AGG | - | chr1.1:8837727-8837746 | MS.gene60262:CDS | 35.0% |
| ! | TTTCCCAAAATTGATTCCCT+GGG | + | chr1.1:8836694-8836713 | None:intergenic | 35.0% |
| !! | TATCCTTTTGATGACAGGAA+CGG | + | chr1.1:8836621-8836640 | None:intergenic | 35.0% |
| !! | TTGATCTATAAGGGAGCATT+TGG | - | chr1.1:8834274-8834293 | MS.gene60262:intron | 35.0% |
| !! | TTGGTCTTAGGTTAAAGAGT+TGG | - | chr1.1:8836436-8836455 | MS.gene60262:intron | 35.0% |
| !!! | CATTTGGTGATGTGTTTTAC+AGG | - | chr1.1:8834290-8834309 | MS.gene60262:intron | 35.0% |
| AAAATATCCCCAAAGAACGG+AGG | + | chr1.1:8836648-8836667 | None:intergenic | 40.0% | |
| AAACCTGCTATCATAACTGC+TGG | + | chr1.1:8835622-8835641 | None:intergenic | 40.0% | |
| AAGCCAACAATACTTACGGT+AGG | + | chr1.1:8836362-8836381 | None:intergenic | 40.0% | |
| AAGGAATGCATTAGGCAACA+AGG | - | chr1.1:8836278-8836297 | MS.gene60262:CDS | 40.0% | |
| AAGTGAGTTCAAGATACCGA+AGG | - | chr1.1:8834957-8834976 | MS.gene60262:CDS | 40.0% | |
| ACATCATAGTGGTAAGCAGA+TGG | + | chr1.1:8835709-8835728 | None:intergenic | 40.0% | |
| ACTTACTTGTAGTGCCTTCT+GGG | + | chr1.1:8836740-8836759 | None:intergenic | 40.0% | |
| AGAGTTTAGCGACTCTTAGA+AGG | - | chr1.1:8835902-8835921 | MS.gene60262:intron | 40.0% | |
| AGGAACGGCTAAAAGTGATA+AGG | + | chr1.1:8836606-8836625 | None:intergenic | 40.0% | |
| AGGGTTGCAGAGGAATTATT+TGG | - | chr1.1:8834785-8834804 | MS.gene60262:intron | 40.0% | |
| ATATCCCGGTAGATTCTTCA+GGG | + | chr1.1:8837757-8837776 | None:intergenic | 40.0% | |
| ATTCCAGCAGTTATGATAGC+AGG | - | chr1.1:8835616-8835635 | MS.gene60262:intron | 40.0% | |
| CTATGTGCATACATGTCCAA+TGG | - | chr1.1:8836396-8836415 | MS.gene60262:intron | 40.0% | |
| GATAATTCCACATATAGCCG+TGG | + | chr1.1:8834348-8834367 | None:intergenic | 40.0% | |
| GCAACTCCTACAATCAACAA+AGG | + | chr1.1:8834392-8834411 | None:intergenic | 40.0% | |
| GCTAACTCTTCCTAGCAAAA+TGG | - | chr1.1:8834871-8834890 | MS.gene60262:intron | 40.0% | |
| GGCTGCTTGGTAAGTATATT+TGG | - | chr1.1:8834496-8834515 | MS.gene60262:CDS | 40.0% | |
| GTACTTGAGTTTATCTACCG+GGG | + | chr1.1:8836169-8836188 | None:intergenic | 40.0% | |
| GTCCAACATACTACCATCAT+TGG | + | chr1.1:8835368-8835387 | None:intergenic | 40.0% | |
| GTTGACCACCAAATATTGAG+TGG | + | chr1.1:8834370-8834389 | None:intergenic | 40.0% | |
| GTTTACCCTGAAGAATCTAC+CGG | - | chr1.1:8837749-8837768 | MS.gene60262:CDS | 40.0% | |
| TAAGAGAGAGATTGCTTCCA+AGG | - | chr1.1:8837089-8837108 | MS.gene60262:intron | 40.0% | |
| TACCCTTGCCATACATCTTT+GGG | - | chr1.1:8835587-8835606 | MS.gene60262:intron | 40.0% | |
| TACTTACTTGTAGTGCCTTC+TGG | + | chr1.1:8836741-8836760 | None:intergenic | 40.0% | |
| TACTTGAGTTTATCTACCGG+GGG | + | chr1.1:8836168-8836187 | None:intergenic | 40.0% | |
| TCGGTATCTTGAACTCACTT+AGG | + | chr1.1:8834957-8834976 | None:intergenic | 40.0% | |
| TCTTGCACTTCTACTTACCA+TGG | + | chr1.1:8835076-8835095 | None:intergenic | 40.0% | |
| TGCTCTCCAAAAGCAATAAC+AGG | + | chr1.1:8834026-8834045 | None:intergenic | 40.0% | |
| TGGATTTGTGCAATCTGTAC+TGG | - | chr1.1:8833951-8833970 | MS.gene60262:intron | 40.0% | |
| TTTACAGTTGATCCGAAGGA+AGG | - | chr1.1:8836241-8836260 | MS.gene60262:CDS | 40.0% | |
| TTTACCCTGAAGAATCTACC+GGG | - | chr1.1:8837750-8837769 | MS.gene60262:CDS | 40.0% | |
| TTTGTTCCAGGGTTTGTGTT+TGG | - | chr1.1:8834699-8834718 | MS.gene60262:CDS | 40.0% | |
| ! | AACAAGGGATTTTCAGCCTT+CGG | + | chr1.1:8834976-8834995 | None:intergenic | 40.0% |
| ! | ACTCTTATTTGCGGCATTCT+TGG | - | chr1.1:8835832-8835851 | MS.gene60262:intron | 40.0% |
| ! | CAGGTAAGCACCATATTTTG+CGG | - | chr1.1:8835925-8835944 | MS.gene60262:CDS | 40.0% |
| ! | CTTTCCCAAAATTGATTCCC+TGG | + | chr1.1:8836695-8836714 | None:intergenic | 40.0% |
| ! | GCACTTCCTGTTATTGCTTT+TGG | - | chr1.1:8834017-8834036 | MS.gene60262:intron | 40.0% |
| ! | GGTAAGCAGATGGTTTTTGA+AGG | + | chr1.1:8835699-8835718 | None:intergenic | 40.0% |
| ! | GGTCAACCTTTGTTGATTGT+AGG | - | chr1.1:8834383-8834402 | MS.gene60262:intron | 40.0% |
| ! | TCTCCCAGGGAATCAATTTT+GGG | - | chr1.1:8836688-8836707 | MS.gene60262:CDS | 40.0% |
| ! | TGTCTTTTCGCGCAGAATTT+TGG | - | chr1.1:8836910-8836929 | MS.gene60262:CDS | 40.0% |
| ! | TTTTCGCGCAGAATTTTGGA+AGG | - | chr1.1:8836914-8836933 | MS.gene60262:CDS | 40.0% |
| !! | ATTAGGTGCCAAGCTGTTTT+TGG | - | chr1.1:8834469-8834488 | MS.gene60262:intron | 40.0% |
| !! | CAGGGAATCAATTTTGGGAA+AGG | - | chr1.1:8836693-8836712 | MS.gene60262:CDS | 40.0% |
| !! | GTAGGTATCCTTTTGATGAC+AGG | + | chr1.1:8836626-8836645 | None:intergenic | 40.0% |
| !! | TGGTACTGACTCTACAAATG+AGG | + | chr1.1:8836948-8836967 | None:intergenic | 40.0% |
| !!! | TTGGTGATGTGTTTTACAGG+TGG | - | chr1.1:8834293-8834312 | MS.gene60262:intron | 40.0% |
| AACAATACTTACGGTAGGCG+CGG | + | chr1.1:8836357-8836376 | None:intergenic | 45.0% | |
| AACAGCTTGGCACCTAATTC+TGG | + | chr1.1:8834467-8834486 | None:intergenic | 45.0% | |
| AACCTGAATCTCTCTACCAC+TGG | - | chr1.1:8835462-8835481 | MS.gene60262:intron | 45.0% | |
| ACACCAGTTGGAACTTTGCT+CGG | + | chr1.1:8835410-8835429 | None:intergenic | 45.0% | |
| ACCCTTGCCATACATCTTTG+GGG | - | chr1.1:8835588-8835607 | MS.gene60262:intron | 45.0% | |
| AGAGTGCGAAGGAATGCATT+AGG | - | chr1.1:8836270-8836289 | MS.gene60262:CDS | 45.0% | |
| AGTGGACAAAGCAACCTTCT+AGG | + | chr1.1:8835434-8835453 | None:intergenic | 45.0% | |
| AGTTGGAACTTTGCTCGGTA+TGG | + | chr1.1:8835405-8835424 | None:intergenic | 45.0% | |
| ATACCGAGCAAAGTTCCAAC+TGG | - | chr1.1:8835404-8835423 | MS.gene60262:intron | 45.0% | |
| ATACCTACCTCCGTTCTTTG+GGG | - | chr1.1:8836638-8836657 | MS.gene60262:CDS | 45.0% | |
| ATTCAATCAGGGTGCATACG+AGG | - | chr1.1:8835320-8835339 | MS.gene60262:CDS | 45.0% | |
| ATTGAATGCCAAAGGGAGAC+AGG | + | chr1.1:8835307-8835326 | None:intergenic | 45.0% | |
| CACCCTGATTGAATGCCAAA+GGG | + | chr1.1:8835314-8835333 | None:intergenic | 45.0% | |
| CATATCCCGGTAGATTCTTC+AGG | + | chr1.1:8837758-8837777 | None:intergenic | 45.0% | |
| CCAAATAGGGCCGCAAAATA+TGG | + | chr1.1:8835938-8835957 | None:intergenic | 45.0% | |
| CTACCACTGGACTGTAGTTA+AGG | - | chr1.1:8835475-8835494 | MS.gene60262:intron | 45.0% | |
| CTCCCTTTGGCATTCAATCA+GGG | - | chr1.1:8835309-8835328 | MS.gene60262:CDS | 45.0% | |
| CTTACTTGTAGTGCCTTCTG+GGG | + | chr1.1:8836739-8836758 | None:intergenic | 45.0% | |
| GAAGGACTCCATTTACTGGA+GGG | + | chr1.1:8835861-8835880 | None:intergenic | 45.0% | |
| GATACCTACCTCCGTTCTTT+GGG | - | chr1.1:8836637-8836656 | MS.gene60262:CDS | 45.0% | |
| GCGAGCCGTGTTTATAGAAA+TGG | - | chr1.1:8836328-8836347 | MS.gene60262:intron | 45.0% | |
| GGATTGACACGGATACCTAT+TGG | - | chr1.1:8837025-8837044 | MS.gene60262:intron | 45.0% | |
| GGCTGAAAATCCCTTGTTAG+AGG | - | chr1.1:8834978-8834997 | MS.gene60262:CDS | 45.0% | |
| GTACCCTTGCCATACATCTT+TGG | - | chr1.1:8835586-8835605 | MS.gene60262:intron | 45.0% | |
| GTACCTTAACTACAGTCCAG+TGG | + | chr1.1:8835481-8835500 | None:intergenic | 45.0% | |
| TAACTTCTCCTGTCTCCCTT+TGG | - | chr1.1:8835296-8835315 | MS.gene60262:intron | 45.0% | |
| TAGCCGTTCCTGTCATCAAA+AGG | - | chr1.1:8836615-8836634 | MS.gene60262:CDS | 45.0% | |
| TAGGTTTACTAGGGTTGCAG+AGG | - | chr1.1:8834775-8834794 | MS.gene60262:intron | 45.0% | |
| TCATAGCGTAGCTTCCAAGA+TGG | - | chr1.1:8835654-8835673 | MS.gene60262:intron | 45.0% | |
| TCTCCCTTTGGCATTCAATC+AGG | - | chr1.1:8835308-8835327 | MS.gene60262:CDS | 45.0% | |
| TGACTGCAACTGCAGGATAT+GGG | - | chr1.1:8835559-8835578 | MS.gene60262:intron | 45.0% | |
| TGAGGAAGGACTCCATTTAC+TGG | + | chr1.1:8835865-8835884 | None:intergenic | 45.0% | |
| TGATGTCCAAACACAAACCC+TGG | + | chr1.1:8834708-8834727 | None:intergenic | 45.0% | |
| TTACTTGTAGTGCCTTCTGG+GGG | + | chr1.1:8836738-8836757 | None:intergenic | 45.0% | |
| TTAGTATGCATAGGGGACTG+AGG | + | chr1.1:8835883-8835902 | None:intergenic | 45.0% | |
| TTCCAACTGGTGTTCCTAGA+AGG | - | chr1.1:8835417-8835436 | MS.gene60262:intron | 45.0% | |
| TTCCAAGATGGCTCAACAGA+AGG | - | chr1.1:8835666-8835685 | MS.gene60262:intron | 45.0% | |
| TTCCTTCTGTTGAGCCATCT+TGG | + | chr1.1:8835671-8835690 | None:intergenic | 45.0% | |
| TTGACACGGATACCTATTGG+TGG | - | chr1.1:8837028-8837047 | MS.gene60262:intron | 45.0% | |
| TTGACATCCACGGCTATATG+TGG | - | chr1.1:8834338-8834357 | MS.gene60262:intron | 45.0% | |
| TTGACTGCAACTGCAGGATA+TGG | - | chr1.1:8835558-8835577 | MS.gene60262:intron | 45.0% | |
| TTTAGCGACTCTTAGAAGGC+AGG | - | chr1.1:8835906-8835925 | MS.gene60262:intron | 45.0% | |
| ! | AACCTTCTAGGAACACCAGT+TGG | + | chr1.1:8835422-8835441 | None:intergenic | 45.0% |
| ! | AAGTCATTGACTGCAACTGC+AGG | - | chr1.1:8835552-8835571 | MS.gene60262:intron | 45.0% |
| ! | AGAGTTGGAGACTTTGAAGG+AGG | - | chr1.1:8836451-8836470 | MS.gene60262:intron | 45.0% |
| ! | ATGGCAATTGATAGTCTCCC+AGG | - | chr1.1:8836674-8836693 | MS.gene60262:CDS | 45.0% |
| ! | CCATATTTTGCGGCCCTATT+TGG | - | chr1.1:8835935-8835954 | MS.gene60262:CDS | 45.0% |
| ! | GTCTCCCAGGGAATCAATTT+TGG | - | chr1.1:8836687-8836706 | MS.gene60262:CDS | 45.0% |
| ! | GTTGCTTTGTCCACTTCCTT+GGG | - | chr1.1:8835439-8835458 | MS.gene60262:intron | 45.0% |
| ! | TAGAGAGATTCAGGTTCCCA+AGG | + | chr1.1:8835458-8835477 | None:intergenic | 45.0% |
| ! | TGGCAATTGATAGTCTCCCA+GGG | - | chr1.1:8836675-8836694 | MS.gene60262:CDS | 45.0% |
| ! | TTCTTTTCATCACCCCCAGA+AGG | - | chr1.1:8836723-8836742 | MS.gene60262:intron | 45.0% |
| !!! | GTGTGTTTTTAGTCCCTCGT+CGG | - | chr1.1:8837298-8837317 | MS.gene60262:CDS | 45.0% |
| !!! | TGCCAAGCTGTTTTTGGCTT+GGG | - | chr1.1:8834475-8834494 | MS.gene60262:CDS | 45.0% |
| !!! | TGGGTTACTTTTCACTGCCA+TGG | - | chr1.1:8835056-8835075 | MS.gene60262:CDS | 45.0% |
| ACAGTTGATCCGAAGGAAGG+TGG | - | chr1.1:8836244-8836263 | MS.gene60262:CDS | 50.0% | |
| AGCCCAAGCCAAAAACAGCT+TGG | + | chr1.1:8834480-8834499 | None:intergenic | 50.0% | |
| CACTCTTCACCACCTTCCTT+CGG | + | chr1.1:8836256-8836275 | None:intergenic | 50.0% | |
| CTTGGTCTCCCTCCAGTAAA+TGG | - | chr1.1:8835850-8835869 | MS.gene60262:intron | 50.0% | |
| GCAACTGCAGGATATGGGAA+AGG | - | chr1.1:8835564-8835583 | MS.gene60262:intron | 50.0% | |
| GCACCCTGATTGAATGCCAA+AGG | + | chr1.1:8835315-8835334 | None:intergenic | 50.0% | |
| GCCCCAAAGATGTATGGCAA+GGG | + | chr1.1:8835592-8835611 | None:intergenic | 50.0% | |
| GGAAGGACTCCATTTACTGG+AGG | + | chr1.1:8835862-8835881 | None:intergenic | 50.0% | |
| GGATACCTACCTCCGTTCTT+TGG | - | chr1.1:8836636-8836655 | MS.gene60262:CDS | 50.0% | |
| GTCCAGTGGTAGAGAGATTC+AGG | + | chr1.1:8835467-8835486 | None:intergenic | 50.0% | |
| GTCTCACAAGTGATTACCCC+CGG | - | chr1.1:8836149-8836168 | MS.gene60262:intron | 50.0% | |
| TATCCCCAAAGAACGGAGGT+AGG | + | chr1.1:8836644-8836663 | None:intergenic | 50.0% | |
| TATGCATAGGGGACTGAGGA+AGG | + | chr1.1:8835879-8835898 | None:intergenic | 50.0% | |
| TGCCCCAAAGATGTATGGCA+AGG | + | chr1.1:8835593-8835612 | None:intergenic | 50.0% | |
| ! | ATGCTTTTAGGCTCCGACGA+GGG | + | chr1.1:8837314-8837333 | None:intergenic | 50.0% |
| ! | CGAGGTGTCATCGCAGATTA+TGG | - | chr1.1:8835338-8835357 | MS.gene60262:CDS | 50.0% |
| ! | GATTCAGGTTCCCAAGGAAG+TGG | + | chr1.1:8835452-8835471 | None:intergenic | 50.0% |
| ! | GCGCCTACCGTAAGTATTGT+TGG | - | chr1.1:8836356-8836375 | MS.gene60262:intron | 50.0% |
| ! | GGTTGCTTTGTCCACTTCCT+TGG | - | chr1.1:8835438-8835457 | MS.gene60262:intron | 50.0% |
| !!! | GTGCCAAGCTGTTTTTGGCT+TGG | - | chr1.1:8834474-8834493 | MS.gene60262:CDS | 50.0% |
| !!! | TGTTTTTGGCTTGGGCTGCT+TGG | - | chr1.1:8834483-8834502 | MS.gene60262:CDS | 50.0% |
| ! | CATGCTTTTAGGCTCCGACG+AGG | + | chr1.1:8837315-8837334 | None:intergenic | 55.0% |
| ! | GAAGGTGGTGAAGAGTGCGA+AGG | - | chr1.1:8836259-8836278 | MS.gene60262:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 8833888 | 8837778 | 8833888 | ID=MS.gene60262 |
| chr1.1 | mRNA | 8833888 | 8837778 | 8833888 | ID=MS.gene60262.t1;Parent=MS.gene60262 |
| chr1.1 | exon | 8837604 | 8837778 | 8837604 | ID=MS.gene60262.t1.exon1;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8837604 | 8837778 | 8837604 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8837162 | 8837354 | 8837162 | ID=MS.gene60262.t1.exon2;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8837162 | 8837354 | 8837162 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8836819 | 8836957 | 8836819 | ID=MS.gene60262.t1.exon3;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8836819 | 8836957 | 8836819 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8836552 | 8836717 | 8836552 | ID=MS.gene60262.t1.exon4;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8836552 | 8836717 | 8836552 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8836170 | 8836336 | 8836170 | ID=MS.gene60262.t1.exon5;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8836170 | 8836336 | 8836170 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8835919 | 8836092 | 8835919 | ID=MS.gene60262.t1.exon6;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8835919 | 8836092 | 8835919 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8835739 | 8835834 | 8835739 | ID=MS.gene60262.t1.exon7;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8835739 | 8835834 | 8835739 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8835302 | 8835418 | 8835302 | ID=MS.gene60262.t1.exon8;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8835302 | 8835418 | 8835302 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8834913 | 8835220 | 8834913 | ID=MS.gene60262.t1.exon9;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8834913 | 8835220 | 8834913 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8834471 | 8834741 | 8834471 | ID=MS.gene60262.t1.exon10;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8834471 | 8834741 | 8834471 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8834103 | 8834288 | 8834103 | ID=MS.gene60262.t1.exon11;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8834103 | 8834288 | 8834103 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| chr1.1 | exon | 8833888 | 8833917 | 8833888 | ID=MS.gene60262.t1.exon12;Parent=MS.gene60262.t1 |
| chr1.1 | CDS | 8833888 | 8833917 | 8833888 | ID=cds.MS.gene60262.t1;Parent=MS.gene60262.t1 |
| Gene Sequence |
| Protein sequence |
